HEADER HYDROLASE 10-JUN-18 6DQ2 TITLE CRONOBACTER SAKAZAKII (ENTEROBACTER SAKAZAKII) METALLO-BETA-LACTAMSE TITLE 2 HARLDQ MOTIF MUTANT S60 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRONOBACTER SAKAZAKII; SOURCE 3 ORGANISM_COMMON: ENTEROBACTER SAKAZAKII; SOURCE 4 ORGANISM_TAXID: 28141; SOURCE 5 GENE: CSK29544_03680; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS METALLO-BETA-LACTAMSE, METAL BINDING PROTEIN, BETA-LACTAMASE, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.MONTEIRO PEDROSO,D.WAITE,M.NATASA,R.MCGEARY,L.GUDDAT,P.HUGENHOLTZ, AUTHOR 2 G.SCHENK REVDAT 4 13-MAR-24 6DQ2 1 REMARK REVDAT 3 24-JUN-20 6DQ2 1 JRNL REVDAT 2 01-JAN-20 6DQ2 1 REMARK REVDAT 1 12-JUN-19 6DQ2 0 JRNL AUTH M.MONTEIRO PEDROSO,D.WAITE,O.MELSE,L.WILSON,N.MITIC, JRNL AUTH 2 R.MCGEARY,I.ANTES,L.GUDDAT,P.HUGENHOLTZ,G.SCHENK JRNL TITL BROAD SPECTRUM ANTIBIOTIC-DEGRADING METALLO-BETA-LACTAMASES JRNL TITL 2 ARE PHYLOGENETICALLY DIVERSE JRNL REF PROTEIN CELL 2020 JRNL REFN ESSN 1674-8018 JRNL DOI 10.1007/S13238-020-00736-4 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 17884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.1608 - 5.0684 0.87 1233 148 0.1835 0.2397 REMARK 3 2 5.0684 - 4.0248 0.92 1241 139 0.1495 0.1671 REMARK 3 3 4.0248 - 3.5166 0.93 1228 129 0.1567 0.2041 REMARK 3 4 3.5166 - 3.1953 0.94 1251 139 0.1728 0.2155 REMARK 3 5 3.1953 - 2.9664 0.94 1238 137 0.1895 0.2456 REMARK 3 6 2.9664 - 2.7916 0.95 1240 140 0.2022 0.2636 REMARK 3 7 2.7916 - 2.6518 0.95 1240 133 0.2081 0.2619 REMARK 3 8 2.6518 - 2.5364 0.95 1243 138 0.2280 0.2618 REMARK 3 9 2.5364 - 2.4388 0.96 1252 142 0.2175 0.2737 REMARK 3 10 2.4388 - 2.3547 0.96 1247 139 0.2272 0.2583 REMARK 3 11 2.3547 - 2.2811 0.96 1249 141 0.2337 0.2611 REMARK 3 12 2.2811 - 2.2159 0.96 1238 138 0.2694 0.3072 REMARK 3 13 2.2159 - 2.1575 0.92 1188 133 0.2946 0.3012 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2052 REMARK 3 ANGLE : 0.569 2788 REMARK 3 CHIRALITY : 0.042 298 REMARK 3 PLANARITY : 0.003 368 REMARK 3 DIHEDRAL : 16.541 1219 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4125 34.7804 19.3916 REMARK 3 T TENSOR REMARK 3 T11: 0.2093 T22: 0.3496 REMARK 3 T33: 0.2867 T12: -0.0056 REMARK 3 T13: 0.0193 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 6.2650 L22: 6.0262 REMARK 3 L33: 6.7317 L12: -0.5925 REMARK 3 L13: -2.4162 L23: -0.9013 REMARK 3 S TENSOR REMARK 3 S11: 0.0838 S12: 0.0896 S13: 0.3844 REMARK 3 S21: 0.1016 S22: 0.0540 S23: -0.3809 REMARK 3 S31: -0.0982 S32: -0.0847 S33: -0.1302 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4170 31.0412 27.4339 REMARK 3 T TENSOR REMARK 3 T11: 0.2371 T22: 0.3378 REMARK 3 T33: 0.3069 T12: -0.0752 REMARK 3 T13: 0.0056 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 4.7308 L22: 3.8139 REMARK 3 L33: 5.7612 L12: -3.3381 REMARK 3 L13: -0.6950 L23: -0.0439 REMARK 3 S TENSOR REMARK 3 S11: -0.2518 S12: -0.1407 S13: 0.0457 REMARK 3 S21: 0.1329 S22: -0.0780 S23: -0.0676 REMARK 3 S31: -0.0342 S32: -0.0838 S33: 0.2930 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0198 19.6872 27.4160 REMARK 3 T TENSOR REMARK 3 T11: 0.4535 T22: 0.4291 REMARK 3 T33: 0.4285 T12: -0.0233 REMARK 3 T13: 0.0673 T23: 0.1108 REMARK 3 L TENSOR REMARK 3 L11: 4.1142 L22: 1.7662 REMARK 3 L33: 3.9370 L12: -1.7384 REMARK 3 L13: -1.9939 L23: 0.4795 REMARK 3 S TENSOR REMARK 3 S11: -0.4221 S12: -0.3280 S13: -0.4243 REMARK 3 S21: 0.2657 S22: 0.0958 S23: 0.0273 REMARK 3 S31: 0.4921 S32: 0.2701 S33: 0.3371 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4557 19.8585 14.0258 REMARK 3 T TENSOR REMARK 3 T11: 0.3641 T22: 0.4888 REMARK 3 T33: 0.4126 T12: -0.1454 REMARK 3 T13: 0.0592 T23: -0.0863 REMARK 3 L TENSOR REMARK 3 L11: 6.0254 L22: 3.3179 REMARK 3 L33: 2.8401 L12: -1.0305 REMARK 3 L13: -0.7730 L23: 0.5710 REMARK 3 S TENSOR REMARK 3 S11: -0.1981 S12: 0.4344 S13: -0.7097 REMARK 3 S21: -0.0847 S22: -0.1581 S23: 0.5098 REMARK 3 S31: 0.5520 S32: -0.6064 S33: 0.3427 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5909 16.7289 14.9204 REMARK 3 T TENSOR REMARK 3 T11: 0.3426 T22: 0.4267 REMARK 3 T33: 0.4386 T12: 0.0115 REMARK 3 T13: 0.0702 T23: 0.0712 REMARK 3 L TENSOR REMARK 3 L11: 8.2879 L22: 7.4798 REMARK 3 L33: 7.3364 L12: -1.6936 REMARK 3 L13: -2.4466 L23: 0.1193 REMARK 3 S TENSOR REMARK 3 S11: -0.2711 S12: -0.7161 S13: -0.4026 REMARK 3 S21: 0.2228 S22: 0.0204 S23: -0.5058 REMARK 3 S31: 0.5074 S32: 0.5173 S33: 0.1993 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 279 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7657 28.9340 7.5250 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.4889 REMARK 3 T33: 0.2501 T12: -0.0204 REMARK 3 T13: 0.0467 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 8.2481 L22: 9.2129 REMARK 3 L33: 2.6231 L12: -5.8533 REMARK 3 L13: -1.1380 L23: 1.0031 REMARK 3 S TENSOR REMARK 3 S11: 0.1988 S12: 0.7851 S13: -0.1056 REMARK 3 S21: -0.2968 S22: -0.3776 S23: 0.3686 REMARK 3 S31: -0.1082 S32: -0.5585 S33: 0.1191 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 280 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5473 22.4695 4.4012 REMARK 3 T TENSOR REMARK 3 T11: 0.2792 T22: 0.3259 REMARK 3 T33: 0.2554 T12: -0.0182 REMARK 3 T13: 0.0868 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 6.6083 L22: 5.7731 REMARK 3 L33: 5.8553 L12: -3.4981 REMARK 3 L13: 2.3282 L23: -0.1840 REMARK 3 S TENSOR REMARK 3 S11: 0.2277 S12: 0.0661 S13: 0.1785 REMARK 3 S21: -0.2664 S22: -0.0689 S23: -0.2922 REMARK 3 S31: 0.3631 S32: 0.0564 S33: -0.1707 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DQ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000234965. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7107 REMARK 200 MONOCHROMATOR : MX2 BEAMLINE AUSTRALIAN REMARK 200 SYNCHROTRON REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18134 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.158 REMARK 200 RESOLUTION RANGE LOW (A) : 35.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.70100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.49 M NAH2PO4 0.91 M K2HPO4, PH 5.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.64733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.82367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.82367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.64733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 517 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 527 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 9 REMARK 465 LYS A 10 REMARK 465 PRO A 11 REMARK 465 ARG A 12 REMARK 465 ILE A 13 REMARK 465 ALA A 14 REMARK 465 LEU A 15 REMARK 465 PHE A 16 REMARK 465 SER A 17 REMARK 465 CYS A 18 REMARK 465 LEU A 19 REMARK 465 MET A 20 REMARK 465 SER A 21 REMARK 465 LEU A 22 REMARK 465 LEU A 23 REMARK 465 SER A 24 REMARK 465 VAL A 25 REMARK 465 PRO A 26 REMARK 465 ALA A 27 REMARK 465 HIS A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 LEU A 31 REMARK 465 ASP A 32 REMARK 465 PRO A 33 REMARK 465 ALA A 34 REMARK 465 GLN A 35 REMARK 465 PRO A 36 REMARK 465 LEU A 37 REMARK 465 ALA A 38 REMARK 465 GLU A 39 REMARK 465 ALA A 40 REMARK 465 PRO A 41 REMARK 465 PRO A 42 REMARK 465 TYR A 43 REMARK 465 SER A 44 REMARK 465 LEU A 45 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 67 -169.76 -108.57 REMARK 500 ASP A 85 163.89 68.57 REMARK 500 ALA A 86 14.89 -149.41 REMARK 500 ARG A 226 -66.26 -23.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6DN4 RELATED DB: PDB DBREF1 6DQ2 A 9 303 UNP A0A0F6VWC7_CROSK DBREF2 6DQ2 A A0A0F6VWC7 24 318 SEQRES 1 A 295 MET LYS PRO ARG ILE ALA LEU PHE SER CYS LEU MET SER SEQRES 2 A 295 LEU LEU SER VAL PRO ALA HIS ALA ALA LEU ASP PRO ALA SEQRES 3 A 295 GLN PRO LEU ALA GLU ALA PRO PRO TYR SER LEU PHE GLU SEQRES 4 A 295 ALA TRP ALA LYS PRO VAL GLN PRO PHE ALA ILE TRP PRO SEQRES 5 A 295 GLY VAL TRP TYR VAL GLY THR GLU ASN LEU SER SER VAL SEQRES 6 A 295 LEU LEU THR THR PRO GLN GLY HIS ILE LEU ILE ASP ALA SEQRES 7 A 295 GLY LEU ASP ALA SER ALA PRO GLN ILE ARG ARG ASN ILE SEQRES 8 A 295 GLU ALA LEU GLY PHE ARG MET ALA ASP ILE ARG TYR ILE SEQRES 9 A 295 ALA ASN SER HIS ALA ARG LEU ASP GLN ALA GLY GLY ILE SEQRES 10 A 295 ALA ARG LEU LYS ALA TRP SER GLY ALA ARG VAL ILE ALA SEQRES 11 A 295 SER HIS ALA ASN ALA GLU GLN MET ALA ARG GLY GLY LYS SEQRES 12 A 295 GLU ASP PHE ALA LEU GLY ASP ALA LEU PRO PHE PRO PRO SEQRES 13 A 295 VAL THR VAL ASP MET GLU ALA GLN ASP GLY GLN GLN TRP SEQRES 14 A 295 HIS LEU GLY GLY VAL THR LEU ALA ALA ILE PHE THR PRO SEQRES 15 A 295 GLY HIS LEU PRO GLY ALA THR SER TRP LYS VAL THR LEU SEQRES 16 A 295 ALA ASP GLY LYS THR LEU ILE TYR ALA ASP SER LEU ALA SEQRES 17 A 295 THR PRO GLY TYR PRO LEU ILE ASN ASN ARG ASN TYR PRO SEQRES 18 A 295 THR LEU VAL GLU ASP ILE ARG ARG SER PHE ALA ARG LEU SEQRES 19 A 295 GLU ALA GLN GLN VAL ASP ILE PHE LEU ALA ASN LYS GLY SEQRES 20 A 295 GLU ARG PHE GLY LEU MET ASP LYS MET ALA ARG LYS ALA SEQRES 21 A 295 ARG GLY GLU ASN ASN ALA PHE ILE ASP LYS ALA GLY LEU SEQRES 22 A 295 ALA ARG TYR VAL ALA GLN SER ARG ALA ALA PHE GLU LYS SEQRES 23 A 295 GLN LEU ALA ALA GLN ARG ALA GLN PRO HET PO4 A 401 5 HET PO4 A 402 5 HETNAM PO4 PHOSPHATE ION FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 HOH *63(H2 O) HELIX 1 AA1 LEU A 88 ALA A 90 5 3 HELIX 2 AA2 SER A 91 LEU A 102 1 12 HELIX 3 AA3 ARG A 105 ALA A 107 5 3 HELIX 4 AA4 GLY A 124 GLY A 133 1 10 HELIX 5 AA5 HIS A 140 ARG A 148 1 9 HELIX 6 AA6 THR A 230 ALA A 244 1 15 HELIX 7 AA7 LYS A 254 PHE A 258 5 5 HELIX 8 AA8 GLY A 259 ARG A 269 1 11 HELIX 9 AA9 ALA A 279 ALA A 301 1 23 SHEET 1 AA1 7 PHE A 56 TRP A 59 0 SHEET 2 AA1 7 VAL A 62 TYR A 64 -1 O VAL A 62 N TRP A 59 SHEET 3 AA1 7 VAL A 73 LEU A 75 -1 O LEU A 74 N TRP A 63 SHEET 4 AA1 7 HIS A 81 ILE A 84 -1 O ILE A 82 N LEU A 75 SHEET 5 AA1 7 ILE A 109 ALA A 113 1 O ALA A 113 N LEU A 83 SHEET 6 AA1 7 ARG A 135 SER A 139 1 O ILE A 137 N ILE A 112 SHEET 7 AA1 7 MET A 169 ALA A 171 1 O MET A 169 N VAL A 136 SHEET 1 AA2 5 GLN A 176 LEU A 179 0 SHEET 2 AA2 5 VAL A 182 PHE A 188 -1 O LEU A 184 N TRP A 177 SHEET 3 AA2 5 THR A 197 THR A 202 -1 O SER A 198 N ILE A 187 SHEET 4 AA2 5 THR A 208 ALA A 212 -1 O LEU A 209 N VAL A 201 SHEET 5 AA2 5 ILE A 249 ALA A 252 1 O LEU A 251 N ILE A 210 SITE 1 AC1 8 HIS A 116 HIS A 192 SER A 214 ASN A 253 SITE 2 AC1 8 LYS A 254 ARG A 257 HOH A 504 HOH A 520 SITE 1 AC2 3 LYS A 200 ARG A 241 GLN A 245 CRYST1 74.406 74.406 107.471 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013440 0.007759 0.000000 0.00000 SCALE2 0.000000 0.015519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009305 0.00000