HEADER IMMUNE SYSTEM 26-JUN-18 6DWC TITLE STRUCTURE OF THE APO 4497 ANTIBODY FAB FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4497 FAB LIGHT CHAIN; COMPND 3 CHAIN: A, L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 4497 FAB HEAVY CHAIN; COMPND 7 CHAIN: B, H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTIBODY, FAB, WALL TEICHOIC ACID, WTA, STAPHYLOCOCCUS AUREUS, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.FONG,P.J.LUPARDUS REVDAT 4 11-OCT-23 6DWC 1 REMARK REVDAT 3 10-OCT-18 6DWC 1 JRNL REVDAT 2 05-SEP-18 6DWC 1 JRNL REVDAT 1 29-AUG-18 6DWC 0 JRNL AUTH R.FONG,K.KAJIHARA,M.CHEN,I.HOTZEL,S.MARIATHASAN, JRNL AUTH 2 W.L.W.HAZENBOS,P.J.LUPARDUS JRNL TITL STRUCTURAL INVESTIGATION OF HUMAN S. AUREUS-TARGETING JRNL TITL 2 ANTIBODIES THAT BIND WALL TEICHOIC ACID. JRNL REF MABS V. 10 979 2018 JRNL REFN ESSN 1942-0870 JRNL PMID 30102105 JRNL DOI 10.1080/19420862.2018.1501252 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 51637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2645 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.33 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.09 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3504 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2742 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3315 REMARK 3 BIN R VALUE (WORKING SET) : 0.2692 REMARK 3 BIN FREE R VALUE : 0.3681 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.39 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 189 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6610 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 623 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -13.49730 REMARK 3 B22 (A**2) : 8.10660 REMARK 3 B33 (A**2) : 5.39060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.258 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.258 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.189 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.239 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.185 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6842 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9314 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2297 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 154 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1010 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6842 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 895 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8013 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.78 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.90 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000235329. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52278 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 156.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.33400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4KVN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16M CALCIUM ACETATE, 0.08 M SODIUM REMARK 280 CACODYLATE, PH 6.5, 14.4% PEG8000, AND 20% GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.18000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.37500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.83500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.37500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.18000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.83500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 GLY A -17 REMARK 465 TRP A -16 REMARK 465 SER A -15 REMARK 465 CYS A -14 REMARK 465 ILE A -13 REMARK 465 ILE A -12 REMARK 465 LEU A -11 REMARK 465 PHE A -10 REMARK 465 LEU A -9 REMARK 465 VAL A -8 REMARK 465 ALA A -7 REMARK 465 THR A -6 REMARK 465 ALA A -5 REMARK 465 THR A -4 REMARK 465 GLY A -3 REMARK 465 VAL A -2 REMARK 465 HIS A -1 REMARK 465 SER A 0 REMARK 465 GLY A 218 REMARK 465 GLU A 219 REMARK 465 CYS A 220 REMARK 465 MET B -18 REMARK 465 GLY B -17 REMARK 465 TRP B -16 REMARK 465 SER B -15 REMARK 465 CYS B -14 REMARK 465 ILE B -13 REMARK 465 ILE B -12 REMARK 465 LEU B -11 REMARK 465 PHE B -10 REMARK 465 LEU B -9 REMARK 465 VAL B -8 REMARK 465 ALA B -7 REMARK 465 THR B -6 REMARK 465 ALA B -5 REMARK 465 THR B -4 REMARK 465 GLY B -3 REMARK 465 VAL B -2 REMARK 465 HIS B -1 REMARK 465 SER B 0 REMARK 465 SER B 133 REMARK 465 THR B 134 REMARK 465 SER B 135 REMARK 465 GLY B 136 REMARK 465 LYS B 217 REMARK 465 SER B 218 REMARK 465 CYS B 219 REMARK 465 ASP B 220 REMARK 465 LYS B 221 REMARK 465 THR B 222 REMARK 465 HIS B 223 REMARK 465 THR B 224 REMARK 465 MET H -18 REMARK 465 GLY H -17 REMARK 465 TRP H -16 REMARK 465 SER H -15 REMARK 465 CYS H -14 REMARK 465 ILE H -13 REMARK 465 ILE H -12 REMARK 465 LEU H -11 REMARK 465 PHE H -10 REMARK 465 LEU H -9 REMARK 465 VAL H -8 REMARK 465 ALA H -7 REMARK 465 THR H -6 REMARK 465 ALA H -5 REMARK 465 THR H -4 REMARK 465 GLY H -3 REMARK 465 VAL H -2 REMARK 465 HIS H -1 REMARK 465 SER H 0 REMARK 465 SER H 133 REMARK 465 THR H 134 REMARK 465 SER H 135 REMARK 465 GLY H 136 REMARK 465 ASP H 220 REMARK 465 LYS H 221 REMARK 465 THR H 222 REMARK 465 HIS H 223 REMARK 465 THR H 224 REMARK 465 MET L -18 REMARK 465 GLY L -17 REMARK 465 TRP L -16 REMARK 465 SER L -15 REMARK 465 CYS L -14 REMARK 465 ILE L -13 REMARK 465 ILE L -12 REMARK 465 LEU L -11 REMARK 465 PHE L -10 REMARK 465 LEU L -9 REMARK 465 VAL L -8 REMARK 465 ALA L -7 REMARK 465 THR L -6 REMARK 465 ALA L -5 REMARK 465 THR L -4 REMARK 465 GLY L -3 REMARK 465 VAL L -2 REMARK 465 HIS L -1 REMARK 465 SER L 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 1 N REMARK 470 LYS B 132 CG CD CE NZ REMARK 470 GLU H 1 N REMARK 470 LYS H 132 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 34 -18.57 81.96 REMARK 500 ALA A 57 -34.30 62.83 REMARK 500 SER A 83 62.92 37.68 REMARK 500 ASN A 144 70.74 47.73 REMARK 500 GLN A 205 -38.39 -38.86 REMARK 500 ASP B 100 -82.42 136.31 REMARK 500 ASP B 147 65.75 60.09 REMARK 500 ASP H 100 84.56 104.22 REMARK 500 ASP H 147 64.19 67.12 REMARK 500 HIS H 203 79.41 -112.31 REMARK 500 ALA L 57 -32.29 67.32 REMARK 500 ALA L 90 -178.63 -177.55 REMARK 500 ASN L 158 -15.60 81.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6DW2 RELATED DB: PDB REMARK 900 RELATED ID: 6DWA RELATED DB: PDB DBREF 6DWC A -18 220 PDB 6DWC 6DWC -18 220 DBREF 6DWC B -18 224 PDB 6DWC 6DWC -18 224 DBREF 6DWC H -18 224 PDB 6DWC 6DWC -18 224 DBREF 6DWC L -18 220 PDB 6DWC 6DWC -18 220 SEQRES 1 A 239 MET GLY TRP SER CYS ILE ILE LEU PHE LEU VAL ALA THR SEQRES 2 A 239 ALA THR GLY VAL HIS SER ASP ILE GLN LEU THR GLN SER SEQRES 3 A 239 PRO ASP SER LEU ALA VAL SER LEU GLY GLU ARG ALA THR SEQRES 4 A 239 ILE ASN CYS LYS SER SER GLN SER ILE PHE ARG THR SER SEQRES 5 A 239 ARG ASN LYS ASN LEU LEU ASN TRP TYR GLN GLN ARG PRO SEQRES 6 A 239 GLY GLN PRO PRO ARG LEU LEU ILE HIS TRP ALA SER THR SEQRES 7 A 239 ARG LYS SER GLY VAL PRO ASP ARG PHE SER GLY SER GLY SEQRES 8 A 239 PHE GLY THR ASP PHE THR LEU THR ILE THR SER LEU GLN SEQRES 9 A 239 ALA GLU ASP VAL ALA ILE TYR TYR CYS GLN GLN TYR PHE SEQRES 10 A 239 SER PRO PRO TYR THR PHE GLY GLN GLY THR LYS LEU GLU SEQRES 11 A 239 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 12 A 239 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 13 A 239 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 14 A 239 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 15 A 239 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 16 A 239 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 17 A 239 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 18 A 239 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 19 A 239 ASN ARG GLY GLU CYS SEQRES 1 B 243 MET GLY TRP SER CYS ILE ILE LEU PHE LEU VAL ALA THR SEQRES 2 B 243 ALA THR GLY VAL HIS SER GLU VAL GLN LEU VAL GLU SER SEQRES 3 B 243 GLY GLY GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SEQRES 4 B 243 SER CYS SER ALA SER GLY PHE SER PHE ASN SER PHE TRP SEQRES 5 B 243 MET HIS TRP VAL ARG GLN VAL PRO GLY LYS GLY LEU VAL SEQRES 6 B 243 TRP ILE SER PHE THR ASN ASN GLU GLY THR THR THR ALA SEQRES 7 B 243 TYR ALA ASP SER VAL ARG GLY ARG PHE ILE ILE SER ARG SEQRES 8 B 243 ASP ASN ALA LYS ASN THR LEU TYR LEU GLU MET ASN ASN SEQRES 9 B 243 LEU ARG GLY GLU ASP THR ALA VAL TYR TYR CYS ALA ARG SEQRES 10 B 243 GLY ASP GLY GLY LEU ASP ASP TRP GLY GLN GLY THR LEU SEQRES 11 B 243 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 12 B 243 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 13 B 243 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 14 B 243 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 15 B 243 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 16 B 243 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 17 B 243 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 18 B 243 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 19 B 243 PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 H 243 MET GLY TRP SER CYS ILE ILE LEU PHE LEU VAL ALA THR SEQRES 2 H 243 ALA THR GLY VAL HIS SER GLU VAL GLN LEU VAL GLU SER SEQRES 3 H 243 GLY GLY GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SEQRES 4 H 243 SER CYS SER ALA SER GLY PHE SER PHE ASN SER PHE TRP SEQRES 5 H 243 MET HIS TRP VAL ARG GLN VAL PRO GLY LYS GLY LEU VAL SEQRES 6 H 243 TRP ILE SER PHE THR ASN ASN GLU GLY THR THR THR ALA SEQRES 7 H 243 TYR ALA ASP SER VAL ARG GLY ARG PHE ILE ILE SER ARG SEQRES 8 H 243 ASP ASN ALA LYS ASN THR LEU TYR LEU GLU MET ASN ASN SEQRES 9 H 243 LEU ARG GLY GLU ASP THR ALA VAL TYR TYR CYS ALA ARG SEQRES 10 H 243 GLY ASP GLY GLY LEU ASP ASP TRP GLY GLN GLY THR LEU SEQRES 11 H 243 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 12 H 243 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 13 H 243 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 14 H 243 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 15 H 243 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 16 H 243 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 17 H 243 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 18 H 243 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 19 H 243 PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 L 239 MET GLY TRP SER CYS ILE ILE LEU PHE LEU VAL ALA THR SEQRES 2 L 239 ALA THR GLY VAL HIS SER ASP ILE GLN LEU THR GLN SER SEQRES 3 L 239 PRO ASP SER LEU ALA VAL SER LEU GLY GLU ARG ALA THR SEQRES 4 L 239 ILE ASN CYS LYS SER SER GLN SER ILE PHE ARG THR SER SEQRES 5 L 239 ARG ASN LYS ASN LEU LEU ASN TRP TYR GLN GLN ARG PRO SEQRES 6 L 239 GLY GLN PRO PRO ARG LEU LEU ILE HIS TRP ALA SER THR SEQRES 7 L 239 ARG LYS SER GLY VAL PRO ASP ARG PHE SER GLY SER GLY SEQRES 8 L 239 PHE GLY THR ASP PHE THR LEU THR ILE THR SER LEU GLN SEQRES 9 L 239 ALA GLU ASP VAL ALA ILE TYR TYR CYS GLN GLN TYR PHE SEQRES 10 L 239 SER PRO PRO TYR THR PHE GLY GLN GLY THR LYS LEU GLU SEQRES 11 L 239 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 12 L 239 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 13 L 239 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 14 L 239 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 15 L 239 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 16 L 239 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 17 L 239 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 18 L 239 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 19 L 239 ASN ARG GLY GLU CYS HET ACT A 301 4 HET ACT H 301 4 HET GOL H 302 6 HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *623(H2 O) HELIX 1 AA1 GLN A 85 VAL A 89 5 5 HELIX 2 AA2 SER A 127 GLY A 134 1 8 HELIX 3 AA3 LYS A 189 LYS A 194 1 6 HELIX 4 AA4 SER B 28 PHE B 32 5 5 HELIX 5 AA5 ASN B 74 LYS B 76 5 3 HELIX 6 AA6 ARG B 87 THR B 91 5 5 HELIX 7 AA7 SER B 159 ALA B 161 5 3 HELIX 8 AA8 SER B 190 LEU B 192 5 3 HELIX 9 AA9 LYS B 204 ASN B 207 5 4 HELIX 10 AB1 SER H 28 PHE H 32 5 5 HELIX 11 AB2 ARG H 87 THR H 91 5 5 HELIX 12 AB3 SER H 159 ALA H 161 5 3 HELIX 13 AB4 SER H 190 GLY H 193 5 4 HELIX 14 AB5 LYS H 204 ASN H 207 5 4 HELIX 15 AB6 GLN L 85 VAL L 89 5 5 HELIX 16 AB7 SER L 127 SER L 133 1 7 HELIX 17 AB8 LYS L 189 LYS L 194 1 6 SHEET 1 AA1 4 LEU A 4 SER A 7 0 SHEET 2 AA1 4 ALA A 19 SER A 25 -1 O LYS A 24 N THR A 5 SHEET 3 AA1 4 ASP A 76 ILE A 81 -1 O PHE A 77 N CYS A 23 SHEET 4 AA1 4 PHE A 68 PHE A 73 -1 N SER A 69 O THR A 80 SHEET 1 AA2 6 SER A 10 SER A 14 0 SHEET 2 AA2 6 THR A 108 LYS A 113 1 O GLU A 111 N LEU A 11 SHEET 3 AA2 6 ALA A 90 GLN A 96 -1 N ALA A 90 O LEU A 110 SHEET 4 AA2 6 LEU A 39 GLN A 44 -1 N ASN A 40 O GLN A 95 SHEET 5 AA2 6 ARG A 51 HIS A 55 -1 O LEU A 53 N TRP A 41 SHEET 6 AA2 6 THR A 59 ARG A 60 -1 O THR A 59 N HIS A 55 SHEET 1 AA3 2 PHE A 30 ARG A 31 0 SHEET 2 AA3 2 LYS A 36 ASN A 37 -1 O LYS A 36 N ARG A 31 SHEET 1 AA4 4 SER A 120 PHE A 124 0 SHEET 2 AA4 4 THR A 135 PHE A 145 -1 O LEU A 141 N PHE A 122 SHEET 3 AA4 4 TYR A 179 SER A 188 -1 O LEU A 185 N VAL A 138 SHEET 4 AA4 4 SER A 165 VAL A 169 -1 N GLN A 166 O THR A 184 SHEET 1 AA5 4 ALA A 159 LEU A 160 0 SHEET 2 AA5 4 LYS A 151 VAL A 156 -1 N VAL A 156 O ALA A 159 SHEET 3 AA5 4 VAL A 197 THR A 203 -1 O GLU A 201 N GLN A 153 SHEET 4 AA5 4 VAL A 211 ASN A 216 -1 O VAL A 211 N VAL A 202 SHEET 1 AA6 4 GLN B 3 SER B 7 0 SHEET 2 AA6 4 LEU B 18 SER B 25 -1 O SER B 23 N VAL B 5 SHEET 3 AA6 4 THR B 78 MET B 83 -1 O LEU B 81 N LEU B 20 SHEET 4 AA6 4 PHE B 68 ASP B 73 -1 N SER B 71 O TYR B 80 SHEET 1 AA7 6 LEU B 11 VAL B 12 0 SHEET 2 AA7 6 THR B 110 VAL B 114 1 O THR B 113 N VAL B 12 SHEET 3 AA7 6 ALA B 92 ARG B 98 -1 N TYR B 94 O THR B 110 SHEET 4 AA7 6 MET B 34 GLN B 39 -1 N VAL B 37 O TYR B 95 SHEET 5 AA7 6 LEU B 45 THR B 51 -1 O VAL B 46 N ARG B 38 SHEET 6 AA7 6 THR B 58 TYR B 60 -1 O ALA B 59 N PHE B 50 SHEET 1 AA8 4 SER B 123 LEU B 127 0 SHEET 2 AA8 4 THR B 138 TYR B 148 -1 O LEU B 144 N PHE B 125 SHEET 3 AA8 4 TYR B 179 PRO B 188 -1 O LEU B 181 N VAL B 145 SHEET 4 AA8 4 VAL B 166 THR B 168 -1 N HIS B 167 O VAL B 184 SHEET 1 AA9 4 SER B 123 LEU B 127 0 SHEET 2 AA9 4 THR B 138 TYR B 148 -1 O LEU B 144 N PHE B 125 SHEET 3 AA9 4 TYR B 179 PRO B 188 -1 O LEU B 181 N VAL B 145 SHEET 4 AA9 4 VAL B 172 LEU B 173 -1 N VAL B 172 O SER B 180 SHEET 1 AB1 3 THR B 154 TRP B 157 0 SHEET 2 AB1 3 ILE B 198 HIS B 203 -1 O ASN B 200 N SER B 156 SHEET 3 AB1 3 THR B 208 LYS B 213 -1 O THR B 208 N HIS B 203 SHEET 1 AB2 4 GLN H 3 SER H 7 0 SHEET 2 AB2 4 LEU H 18 SER H 25 -1 O SER H 23 N VAL H 5 SHEET 3 AB2 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AB2 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AB3 6 LEU H 11 VAL H 12 0 SHEET 2 AB3 6 THR H 110 VAL H 114 1 O THR H 113 N VAL H 12 SHEET 3 AB3 6 ALA H 92 ARG H 98 -1 N ALA H 92 O VAL H 112 SHEET 4 AB3 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AB3 6 LEU H 45 THR H 51 -1 O VAL H 46 N ARG H 38 SHEET 6 AB3 6 THR H 58 TYR H 60 -1 O ALA H 59 N PHE H 50 SHEET 1 AB4 4 SER H 123 LEU H 127 0 SHEET 2 AB4 4 THR H 138 TYR H 148 -1 O LEU H 144 N PHE H 125 SHEET 3 AB4 4 TYR H 179 PRO H 188 -1 O LEU H 181 N VAL H 145 SHEET 4 AB4 4 VAL H 166 THR H 168 -1 N HIS H 167 O VAL H 184 SHEET 1 AB5 4 SER H 123 LEU H 127 0 SHEET 2 AB5 4 THR H 138 TYR H 148 -1 O LEU H 144 N PHE H 125 SHEET 3 AB5 4 TYR H 179 PRO H 188 -1 O LEU H 181 N VAL H 145 SHEET 4 AB5 4 VAL H 172 LEU H 173 -1 N VAL H 172 O SER H 180 SHEET 1 AB6 3 THR H 154 TRP H 157 0 SHEET 2 AB6 3 ILE H 198 HIS H 203 -1 O ASN H 200 N SER H 156 SHEET 3 AB6 3 THR H 208 LYS H 213 -1 O THR H 208 N HIS H 203 SHEET 1 AB7 4 LEU L 4 SER L 7 0 SHEET 2 AB7 4 ALA L 19 SER L 25 -1 O LYS L 24 N THR L 5 SHEET 3 AB7 4 ASP L 76 ILE L 81 -1 O LEU L 79 N ILE L 21 SHEET 4 AB7 4 PHE L 68 PHE L 73 -1 N SER L 71 O THR L 78 SHEET 1 AB8 6 SER L 10 SER L 14 0 SHEET 2 AB8 6 THR L 108 LYS L 113 1 O GLU L 111 N LEU L 11 SHEET 3 AB8 6 ALA L 90 GLN L 96 -1 N ALA L 90 O LEU L 110 SHEET 4 AB8 6 LEU L 39 GLN L 44 -1 N ASN L 40 O GLN L 95 SHEET 5 AB8 6 ARG L 51 HIS L 55 -1 O LEU L 53 N TRP L 41 SHEET 6 AB8 6 THR L 59 ARG L 60 -1 O THR L 59 N HIS L 55 SHEET 1 AB9 2 PHE L 30 ARG L 31 0 SHEET 2 AB9 2 LYS L 36 ASN L 37 -1 O LYS L 36 N ARG L 31 SHEET 1 AC1 4 SER L 120 PHE L 124 0 SHEET 2 AC1 4 THR L 135 PHE L 145 -1 O ASN L 143 N SER L 120 SHEET 3 AC1 4 TYR L 179 SER L 188 -1 O LEU L 185 N VAL L 138 SHEET 4 AC1 4 SER L 165 VAL L 169 -1 N GLN L 166 O THR L 184 SHEET 1 AC2 4 ALA L 159 LEU L 160 0 SHEET 2 AC2 4 LYS L 151 VAL L 156 -1 N VAL L 156 O ALA L 159 SHEET 3 AC2 4 VAL L 197 THR L 203 -1 O GLU L 201 N GLN L 153 SHEET 4 AC2 4 VAL L 211 ASN L 216 -1 O VAL L 211 N VAL L 202 SSBOND 1 CYS A 23 CYS A 94 1555 1555 2.07 SSBOND 2 CYS A 140 CYS A 200 1555 1555 2.03 SSBOND 3 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 4 CYS B 143 CYS B 199 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 6 CYS H 143 CYS H 199 1555 1555 2.03 SSBOND 7 CYS H 219 CYS L 220 1555 1555 2.04 SSBOND 8 CYS L 23 CYS L 94 1555 1555 2.07 SSBOND 9 CYS L 140 CYS L 200 1555 1555 2.02 CISPEP 1 SER A 7 PRO A 8 0 -4.41 CISPEP 2 PRO A 100 PRO A 101 0 2.67 CISPEP 3 TYR A 146 PRO A 147 0 -0.52 CISPEP 4 PHE B 149 PRO B 150 0 -7.97 CISPEP 5 GLU B 151 PRO B 152 0 -0.39 CISPEP 6 PHE H 149 PRO H 150 0 -6.60 CISPEP 7 GLU H 151 PRO H 152 0 -2.20 CISPEP 8 SER L 7 PRO L 8 0 -4.57 CISPEP 9 PRO L 100 PRO L 101 0 -0.87 CISPEP 10 TYR L 146 PRO L 147 0 0.09 SITE 1 AC1 5 ARG A 18 THR A 82 HOH A 403 LYS L 175 SITE 2 AC1 5 ASP L 176 SITE 1 AC2 4 HIS H 167 HOH H 455 ASP L 173 HOH L 349 SITE 1 AC3 9 PRO H 126 ALA H 128 LYS H 212 LYS H 213 SITE 2 AC3 9 VAL H 214 GLU H 215 LYS H 217 HOH H 409 SITE 3 AC3 9 HOH H 476 CRYST1 64.360 109.670 156.750 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015538 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009118 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006380 0.00000