HEADER PLANT PROTEIN/ANTIBIOTIC 06-JUL-18 6E0D TITLE X-RAY STRUCTURE OF A COMPLEX OF THAUMATIN WITH XYLENE CYANOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: THAUMATIN I; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THAUMATIN-1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THAUMATOCOCCUS DANIELLII; SOURCE 3 ORGANISM_COMMON: KATEMFE; SOURCE 4 ORGANISM_TAXID: 4621 KEYWDS SWEET TASTING PROTEIN, DISULFIDES, DYE BINDING, XYLENE CYANOL, PLANT KEYWDS 2 PROTEIN, PLANT PROTEIN-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.MCPHERSON REVDAT 3 23-OCT-24 6E0D 1 HETSYN REVDAT 2 29-JUL-20 6E0D 1 COMPND REMARK HETNAM HETSYN REVDAT 2 2 1 SITE ATOM REVDAT 1 19-SEP-18 6E0D 0 JRNL AUTH A.MCPHERSON,S.B.LARSON JRNL TITL INVESTIGATION INTO THE BINDING OF DYES WITHIN PROTEIN JRNL TITL 2 CRYSTALS. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 74 593 2018 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 30198893 JRNL DOI 10.1107/S2053230X18010300 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 3 NUMBER OF REFLECTIONS : 11496 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.127 REMARK 3 R VALUE (WORKING SET) : 0.125 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 609 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.24 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 REFLECTION IN BIN (WORKING SET) : 199 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 21.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.1200 REMARK 3 BIN FREE R VALUE SET COUNT : 12 REMARK 3 BIN FREE R VALUE : 0.1730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1546 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.148 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1636 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1435 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2226 ; 1.524 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3352 ; 0.710 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 209 ; 6.573 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;38.754 ;23.134 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 248 ;13.260 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.518 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 243 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1828 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 348 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 827 ; 2.511 ; 1.982 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 826 ; 2.506 ; 1.980 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1033 ; 3.391 ; 2.962 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1034 ; 3.390 ; 2.965 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 806 ; 5.405 ; 2.713 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 806 ; 5.398 ; 2.713 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1185 ; 7.856 ; 3.785 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1793 ;15.284 ;26.036 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1792 ;15.281 ;26.008 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6E0D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235495. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.0 - 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5419 REMARK 200 MONOCHROMATOR : OSMIC REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12161 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 52.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 32.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 20.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.06900 REMARK 200 R SYM FOR SHELL (I) : 0.06900 REMARK 200 FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: TETRAGONAL BIPYRAMIDS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SITTING DROP AT ROOM TEMPERATURE WITH REMARK 280 0.6 ML RESERVOIRS COMPOSED OF 0.6 M TO 1.0 M SODIUM TARTRATE REMARK 280 TITRATED TO PH 6.5. DROPS COMPOSED OF EQUAL VOLUMES OF 50 MG/ML REMARK 280 LYOPHILIZED THAUMATIN IN WATER WITH THE RESERVOIR SOLUTION. REMARK 280 CRYSTALS APPEAR AFTER 12 HOURS AND GROW TO FULL SIZE OVER THREE REMARK 280 DAYS, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.79300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.32700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.32700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.89650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.32700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.32700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 113.68950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.32700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.32700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.89650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.32700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.32700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 113.68950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 75.79300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 ALA A -20 REMARK 465 ALA A -19 REMARK 465 THR A -18 REMARK 465 THR A -17 REMARK 465 CYS A -16 REMARK 465 PHE A -15 REMARK 465 PHE A -14 REMARK 465 PHE A -13 REMARK 465 LEU A -12 REMARK 465 PHE A -11 REMARK 465 PRO A -10 REMARK 465 PHE A -9 REMARK 465 LEU A -8 REMARK 465 LEU A -7 REMARK 465 LEU A -6 REMARK 465 LEU A -5 REMARK 465 THR A -4 REMARK 465 LEU A -3 REMARK 465 SER A -2 REMARK 465 ARG A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 207 REMARK 465 LEU A 208 REMARK 465 GLU A 209 REMARK 465 LEU A 210 REMARK 465 GLU A 211 REMARK 465 ASP A 212 REMARK 465 GLU A 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N3 XXX A 502 O HOH A 601 1.65 REMARK 500 OE1 GLU A 168 O HOH A 602 1.82 REMARK 500 O HOH A 620 O HOH A 657 1.86 REMARK 500 NE2 GLN A 94 O HOH A 603 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 25 -140.62 52.49 REMARK 500 CYS A 71 77.02 -115.54 REMARK 500 REMARK 500 REMARK: NULL DBREF 6E0D A -21 213 UNP P02883 THM1_THADA 1 235 SEQADV 6E0D LYS A 46 UNP P02883 ASN 68 CONFLICT SEQRES 1 A 235 MET ALA ALA THR THR CYS PHE PHE PHE LEU PHE PRO PHE SEQRES 2 A 235 LEU LEU LEU LEU THR LEU SER ARG ALA ALA THR PHE GLU SEQRES 3 A 235 ILE VAL ASN ARG CYS SER TYR THR VAL TRP ALA ALA ALA SEQRES 4 A 235 SER LYS GLY ASP ALA ALA LEU ASP ALA GLY GLY ARG GLN SEQRES 5 A 235 LEU ASN SER GLY GLU SER TRP THR ILE ASN VAL GLU PRO SEQRES 6 A 235 GLY THR LYS GLY GLY LYS ILE TRP ALA ARG THR ASP CYS SEQRES 7 A 235 TYR PHE ASP ASP SER GLY SER GLY ILE CYS LYS THR GLY SEQRES 8 A 235 ASP CYS GLY GLY LEU LEU ARG CYS LYS ARG PHE GLY ARG SEQRES 9 A 235 PRO PRO THR THR LEU ALA GLU PHE SER LEU ASN GLN TYR SEQRES 10 A 235 GLY LYS ASP TYR ILE ASP ILE SER ASN ILE LYS GLY PHE SEQRES 11 A 235 ASN VAL PRO MET ASP PHE SER PRO THR THR ARG GLY CYS SEQRES 12 A 235 ARG GLY VAL ARG CYS ALA ALA ASP ILE VAL GLY GLN CYS SEQRES 13 A 235 PRO ALA LYS LEU LYS ALA PRO GLY GLY GLY CYS ASN ASP SEQRES 14 A 235 ALA CYS THR VAL PHE GLN THR SER GLU TYR CYS CYS THR SEQRES 15 A 235 THR GLY LYS CYS GLY PRO THR GLU TYR SER ARG PHE PHE SEQRES 16 A 235 LYS ARG LEU CYS PRO ASP ALA PHE SER TYR VAL LEU ASP SEQRES 17 A 235 LYS PRO THR THR VAL THR CYS PRO GLY SER SER ASN TYR SEQRES 18 A 235 ARG VAL THR PHE CYS PRO THR ALA LEU GLU LEU GLU ASP SEQRES 19 A 235 GLU HET TLA A 501 10 HET XXX A 502 22 HETNAM TLA L(+)-TARTARIC ACID HETNAM XXX (1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL 2, HETNAM 2 XXX 6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE HETSYN XXX (2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3- HETSYN 2 XXX DIHYDROXYCYCLOHEXYLOXY)-5-AMINO-2-(AMINOMETHYL)- HETSYN 3 XXX TETRAHYDRO-2H-PYRA N-3,4-DIOL; NEOMYCIN A; NEAMINE; HETSYN 4 XXX (1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL HETSYN 5 XXX 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOSIDE; (1R,2R,3S, HETSYN 6 XXX 4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL 2,6- HETSYN 7 XXX DIAMINO-2,6-DIDEOXY-D-GLUCOSIDE; (1R,2R,3S,4R,6S)-4,6- HETSYN 8 XXX DIAMINO-2,3-DIHYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6- HETSYN 9 XXX DIDEOXY-GLUCOSIDE FORMUL 2 TLA C4 H6 O6 FORMUL 3 XXX C12 H26 N4 O6 FORMUL 4 HOH *109(H2 O) HELIX 1 AA1 ASP A 129 CYS A 134 1 6 HELIX 2 AA2 PRO A 135 LYS A 139 5 5 HELIX 3 AA3 ASP A 147 GLN A 153 1 7 HELIX 4 AA4 THR A 154 CYS A 159 1 6 HELIX 5 AA5 THR A 167 CYS A 177 1 11 SHEET 1 AA1 5 SER A 36 ASN A 40 0 SHEET 2 AA1 5 THR A 2 ASN A 7 -1 N ILE A 5 O TRP A 37 SHEET 3 AA1 5 TYR A 199 PHE A 203 1 O VAL A 201 N VAL A 6 SHEET 4 AA1 5 MET A 112 PRO A 116 -1 N SER A 115 O ARG A 200 SHEET 5 AA1 5 VAL A 124 CYS A 126 -1 O VAL A 124 N PHE A 114 SHEET 1 AA2 6 ALA A 23 LEU A 31 0 SHEET 2 AA2 6 VAL A 13 SER A 18 -1 N VAL A 13 O LEU A 31 SHEET 3 AA2 6 GLY A 48 PHE A 58 -1 O LYS A 49 N SER A 18 SHEET 4 AA2 6 LEU A 87 GLN A 94 -1 O ALA A 88 N ILE A 50 SHEET 5 AA2 6 LYS A 97 SER A 103 -1 O LYS A 97 N GLN A 94 SHEET 6 AA2 6 ALA A 180 PHE A 181 1 O PHE A 181 N ILE A 102 SHEET 1 AA3 5 GLY A 64 THR A 68 0 SHEET 2 AA3 5 GLY A 48 PHE A 58 -1 N TYR A 57 O ILE A 65 SHEET 3 AA3 5 LEU A 87 GLN A 94 -1 O ALA A 88 N ILE A 50 SHEET 4 AA3 5 LYS A 97 SER A 103 -1 O LYS A 97 N GLN A 94 SHEET 5 AA3 5 VAL A 191 PRO A 194 -1 O VAL A 191 N ILE A 100 SSBOND 1 CYS A 9 CYS A 204 1555 1555 2.03 SSBOND 2 CYS A 56 CYS A 66 1555 1555 2.02 SSBOND 3 CYS A 71 CYS A 77 1555 1555 2.05 SSBOND 4 CYS A 121 CYS A 193 1555 1555 2.01 SSBOND 5 CYS A 126 CYS A 177 1555 1555 2.05 SSBOND 6 CYS A 134 CYS A 145 1555 1555 2.06 SSBOND 7 CYS A 149 CYS A 158 1555 1555 2.05 SSBOND 8 CYS A 159 CYS A 164 1555 1555 2.00 CISPEP 1 PRO A 83 PRO A 84 0 5.34 CRYST1 58.654 58.654 151.586 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017049 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006597 0.00000