HEADER IMMUNE SYSTEM 03-AUG-18 6EAQ TITLE GLYCOSYLATED FCGR3B / CD16B IN COMPLEX WITH AFUCOSYLATED IGG1 FC COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN NIE; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: LOW AFFINITY IMMUNOGLOBULIN GAMMA FC REGION RECEPTOR III-B; COMPND 8 CHAIN: C; COMPND 9 SYNONYM: FC-GAMMA RIII-BETA,FCRIIIB,FCR-10,IGG FC RECEPTOR III-1; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: FCGR3B, CD16B, FCG3, FCGR3, IGFR3; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HEK293S LEC1(-/-) KEYWDS GLYCOSYLATION, GLYCOPROTEIN, IGG1 FC, CD16B, FCGR3B, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.T.ROBERTS,A.W.BARB REVDAT 6 11-OCT-23 6EAQ 1 HETSYN LINK REVDAT 5 29-JUL-20 6EAQ 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 04-DEC-19 6EAQ 1 REMARK REVDAT 3 09-JAN-19 6EAQ 1 JRNL REVDAT 2 14-NOV-18 6EAQ 1 JRNL REVDAT 1 07-NOV-18 6EAQ 0 JRNL AUTH J.T.ROBERTS,A.W.BARB JRNL TITL A SINGLE AMINO ACID DISTORTS THE FC GAMMA RECEPTOR JRNL TITL 2 IIIB/CD16B STRUCTURE UPON BINDING IMMUNOGLOBULIN G1 AND JRNL TITL 3 REDUCES AFFINITY RELATIVE TO CD16A. JRNL REF J. BIOL. CHEM. V. 293 19899 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30361439 JRNL DOI 10.1074/JBC.RA118.005273 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1-2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 40154 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7051 - 6.0217 1.00 2007 149 0.1717 0.1919 REMARK 3 2 6.0217 - 4.7813 1.00 1948 146 0.1442 0.1705 REMARK 3 3 4.7813 - 4.1773 1.00 1922 144 0.1340 0.1563 REMARK 3 4 4.1773 - 3.7956 1.00 1928 144 0.1716 0.1914 REMARK 3 5 3.7956 - 3.5237 0.98 1864 139 0.2167 0.2522 REMARK 3 6 3.5237 - 3.3160 1.00 1915 143 0.2070 0.2372 REMARK 3 7 3.3160 - 3.1500 1.00 1924 142 0.2090 0.2322 REMARK 3 8 3.1500 - 3.0129 1.00 1897 143 0.2221 0.2971 REMARK 3 9 3.0129 - 2.8969 1.00 1887 140 0.2366 0.2955 REMARK 3 10 2.8969 - 2.7969 1.00 1926 144 0.2330 0.2623 REMARK 3 11 2.7969 - 2.7095 1.00 1898 141 0.2249 0.2555 REMARK 3 12 2.7095 - 2.6321 1.00 1884 142 0.2373 0.3222 REMARK 3 13 2.6321 - 2.5628 1.00 1872 138 0.2471 0.2704 REMARK 3 14 2.5628 - 2.5003 1.00 1922 145 0.2510 0.2925 REMARK 3 15 2.5003 - 2.4434 0.99 1861 138 0.2472 0.2849 REMARK 3 16 2.4434 - 2.3914 0.99 1880 141 0.2582 0.2892 REMARK 3 17 2.3914 - 2.3436 0.98 1839 134 0.2690 0.2978 REMARK 3 18 2.3436 - 2.2994 0.95 1788 133 0.3253 0.3493 REMARK 3 19 2.2994 - 2.2583 0.92 1746 129 0.4000 0.4348 REMARK 3 20 2.2583 - 2.2200 0.78 1464 107 0.6157 0.6384 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4992 REMARK 3 ANGLE : 1.073 6850 REMARK 3 CHIRALITY : 0.057 822 REMARK 3 PLANARITY : 0.006 841 REMARK 3 DIHEDRAL : 15.120 2995 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EAQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000235489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 1M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 RV704W REMARK 200 DATA SCALING SOFTWARE : HKL-3000 RV704W REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 45.695 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.17690 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 2.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.10.1-2155 REMARK 200 STARTING MODEL: 5VU0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.0 50 MM MES, 8% PEG3350 AND 60 MM REMARK 280 NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.81450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.69400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.81450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.69400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 225 REMARK 465 CYS A 226 REMARK 465 PRO A 227 REMARK 465 PRO A 228 REMARK 465 CYS A 229 REMARK 465 PRO A 230 REMARK 465 ALA A 231 REMARK 465 PRO A 232 REMARK 465 GLU A 233 REMARK 465 LEU A 234 REMARK 465 THR B 225 REMARK 465 CYS B 226 REMARK 465 PRO B 227 REMARK 465 PRO B 228 REMARK 465 CYS B 229 REMARK 465 PRO B 230 REMARK 465 ALA B 231 REMARK 465 PRO B 232 REMARK 465 ARG C 1 REMARK 465 THR C 2 REMARK 465 GLU C 3 REMARK 465 ASP C 4 REMARK 465 TYR C 33 REMARK 465 SER C 34 REMARK 465 PRO C 35 REMARK 465 GLU C 36 REMARK 465 ASP C 37 REMARK 465 GLN C 38 REMARK 465 GLY C 175 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 235 CG CD1 CD2 REMARK 470 ILE A 253 CD1 REMARK 470 LYS A 288 CD CE NZ REMARK 470 LYS A 290 CE NZ REMARK 470 GLN A 311 CD OE1 NE2 REMARK 470 LYS A 326 CE NZ REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 ARG A 355 CZ NH1 NH2 REMARK 470 ASN A 384 OD1 ND2 REMARK 470 ASN A 389 CG OD1 ND2 REMARK 470 LYS B 248 CE NZ REMARK 470 GLU B 272 CD OE1 OE2 REMARK 470 LYS B 274 CE NZ REMARK 470 LYS B 288 CD CE NZ REMARK 470 GLU B 294 CD OE1 OE2 REMARK 470 TYR B 296 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 300 CE1 CE2 CZ OH REMARK 470 LYS B 326 CD CE NZ REMARK 470 ARG B 355 CD NE CZ NH1 NH2 REMARK 470 LYS B 360 CD CE NZ REMARK 470 SER B 444 C O REMARK 470 LYS C 7 CD CE NZ REMARK 470 VAL C 9 CG1 CG2 REMARK 470 PHE C 11 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU C 13 CG CD OE1 OE2 REMARK 470 TYR C 17 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 22 CE NZ REMARK 470 LYS C 28 CE NZ REMARK 470 GLN C 30 CG CD OE1 NE2 REMARK 470 ALA C 32 O REMARK 470 GLN C 41 CD OE1 NE2 REMARK 470 LEU C 48 CG CD1 CD2 REMARK 470 SER C 50 C O CB OG REMARK 470 SER C 51 N OG REMARK 470 GLN C 64 CD OE1 NE2 REMARK 470 GLN C 74 CG CD OE1 NE2 REMARK 470 LEU C 75 CG CD1 CD2 REMARK 470 GLN C 83 CG CD OE1 NE2 REMARK 470 LYS C 101 CG CD CE NZ REMARK 470 GLU C 103 OE1 OE2 REMARK 470 LYS C 143 CE NZ REMARK 470 LYS C 147 NZ REMARK 470 GLN C 174 C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 342 O HOH B 601 2.00 REMARK 500 O HOH A 732 O HOH A 744 2.00 REMARK 500 NH1 ARG A 344 O HOH A 601 2.01 REMARK 500 O HOH A 738 O HOH A 744 2.02 REMARK 500 O HOH B 658 O HOH B 720 2.02 REMARK 500 O HOH B 663 O HOH B 667 2.04 REMARK 500 O SER C 51 O HOH C 301 2.05 REMARK 500 O LEU A 328 O HOH A 602 2.07 REMARK 500 O HOH A 692 O HOH C 359 2.07 REMARK 500 O PRO C 105 O HOH C 302 2.07 REMARK 500 O HOH B 637 O HOH B 709 2.08 REMARK 500 NH1 ARG A 301 O HOH A 603 2.08 REMARK 500 O TYR A 436 O HOH A 604 2.09 REMARK 500 OD2 ASP C 129 O HOH C 303 2.11 REMARK 500 O PRO C 96 O HOH C 304 2.11 REMARK 500 NH2 ARG A 416 O HOH A 605 2.13 REMARK 500 O ALA C 117 O HOH C 305 2.14 REMARK 500 O HOH A 699 O HOH A 734 2.14 REMARK 500 O GLY B 237 O HOH B 602 2.15 REMARK 500 O HOH B 714 O HOH B 718 2.16 REMARK 500 OG1 THR A 307 O HOH A 606 2.17 REMARK 500 OG1 THR C 171 O HOH C 306 2.17 REMARK 500 O2 MAN D 7 O HOH A 607 2.17 REMARK 500 OG SER A 383 O HOH A 605 2.19 REMARK 500 OD2 ASP A 413 O HOH A 608 2.19 REMARK 500 NZ LYS A 248 O HOH A 609 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 609 O HOH A 729 2955 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 435 17.01 59.74 REMARK 500 ALA B 327 2.78 -67.96 REMARK 500 GLN C 72 140.00 -172.38 REMARK 500 GLU C 103 -9.32 76.12 REMARK 500 LYS C 114 23.73 49.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 729 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 730 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B 731 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH C 369 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH C 370 DISTANCE = 9.27 ANGSTROMS REMARK 525 HOH C 371 DISTANCE = 10.58 ANGSTROMS REMARK 525 HOH C 372 DISTANCE = 11.34 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GAL D 6 DBREF 6EAQ A 225 444 UNP P0DOX5 IGG1_HUMAN 227 446 DBREF 6EAQ B 225 444 UNP P0DOX5 IGG1_HUMAN 227 446 DBREF 6EAQ C 1 175 UNP O75015 FCG3B_HUMAN 19 193 SEQADV 6EAQ GLN C 38 UNP O75015 ASN 56 ENGINEERED MUTATION SEQADV 6EAQ GLN C 64 UNP O75015 ASN 82 ENGINEERED MUTATION SEQADV 6EAQ GLN C 74 UNP O75015 ASN 92 ENGINEERED MUTATION SEQADV 6EAQ GLN C 169 UNP O75015 ASN 187 ENGINEERED MUTATION SEQRES 1 A 220 THR CYS PRO PRO CYS PRO ALA PRO GLU LEU LEU GLY GLY SEQRES 2 A 220 PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS ASP THR SEQRES 3 A 220 LEU MET ILE SER ARG THR PRO GLU VAL THR CYS VAL VAL SEQRES 4 A 220 VAL ASP VAL SER HIS GLU ASP PRO GLU VAL LYS PHE ASN SEQRES 5 A 220 TRP TYR VAL ASP GLY VAL GLU VAL HIS ASN ALA LYS THR SEQRES 6 A 220 LYS PRO ARG GLU GLU GLN TYR ASN SER THR TYR ARG VAL SEQRES 7 A 220 VAL SER VAL LEU THR VAL LEU HIS GLN ASP TRP LEU ASN SEQRES 8 A 220 GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS ALA LEU SEQRES 9 A 220 PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA LYS GLY SEQRES 10 A 220 GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO PRO SER SEQRES 11 A 220 ARG ASP GLU LEU THR LYS ASN GLN VAL SER LEU THR CYS SEQRES 12 A 220 LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA VAL GLU SEQRES 13 A 220 TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR LYS THR SEQRES 14 A 220 THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE PHE LEU SEQRES 15 A 220 TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP GLN GLN SEQRES 16 A 220 GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU ALA LEU SEQRES 17 A 220 HIS ASN HIS TYR THR GLN LYS SER LEU SER LEU SER SEQRES 1 B 220 THR CYS PRO PRO CYS PRO ALA PRO GLU LEU LEU GLY GLY SEQRES 2 B 220 PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS ASP THR SEQRES 3 B 220 LEU MET ILE SER ARG THR PRO GLU VAL THR CYS VAL VAL SEQRES 4 B 220 VAL ASP VAL SER HIS GLU ASP PRO GLU VAL LYS PHE ASN SEQRES 5 B 220 TRP TYR VAL ASP GLY VAL GLU VAL HIS ASN ALA LYS THR SEQRES 6 B 220 LYS PRO ARG GLU GLU GLN TYR ASN SER THR TYR ARG VAL SEQRES 7 B 220 VAL SER VAL LEU THR VAL LEU HIS GLN ASP TRP LEU ASN SEQRES 8 B 220 GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS ALA LEU SEQRES 9 B 220 PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA LYS GLY SEQRES 10 B 220 GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO PRO SER SEQRES 11 B 220 ARG ASP GLU LEU THR LYS ASN GLN VAL SER LEU THR CYS SEQRES 12 B 220 LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA VAL GLU SEQRES 13 B 220 TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR LYS THR SEQRES 14 B 220 THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE PHE LEU SEQRES 15 B 220 TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP GLN GLN SEQRES 16 B 220 GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU ALA LEU SEQRES 17 B 220 HIS ASN HIS TYR THR GLN LYS SER LEU SER LEU SER SEQRES 1 C 175 ARG THR GLU ASP LEU PRO LYS ALA VAL VAL PHE LEU GLU SEQRES 2 C 175 PRO GLN TRP TYR SER VAL LEU GLU LYS ASP SER VAL THR SEQRES 3 C 175 LEU LYS CYS GLN GLY ALA TYR SER PRO GLU ASP GLN SER SEQRES 4 C 175 THR GLN TRP PHE HIS ASN GLU SER LEU ILE SER SER GLN SEQRES 5 C 175 ALA SER SER TYR PHE ILE ASP ALA ALA THR VAL GLN ASP SEQRES 6 C 175 SER GLY GLU TYR ARG CYS GLN THR GLN LEU SER THR LEU SEQRES 7 C 175 SER ASP PRO VAL GLN LEU GLU VAL HIS ILE GLY TRP LEU SEQRES 8 C 175 LEU LEU GLN ALA PRO ARG TRP VAL PHE LYS GLU GLU ASP SEQRES 9 C 175 PRO ILE HIS LEU ARG CYS HIS SER TRP LYS ASN THR ALA SEQRES 10 C 175 LEU HIS LYS VAL THR TYR LEU GLN ASN GLY LYS ASP ARG SEQRES 11 C 175 LYS TYR PHE HIS HIS ASN SER ASP PHE HIS ILE PRO LYS SEQRES 12 C 175 ALA THR LEU LYS ASP SER GLY SER TYR PHE CYS ARG GLY SEQRES 13 C 175 LEU VAL GLY SER LYS ASN VAL SER SER GLU THR VAL GLN SEQRES 14 C 175 ILE THR ILE THR GLN GLY HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG D 5 14 HET GAL D 6 9 HET MAN D 7 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET NAG E 5 14 HET GAL E 6 11 HET MAN E 7 11 HET NAG E 8 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE FORMUL 4 NAG 11(C8 H15 N O6) FORMUL 4 BMA 4(C6 H12 O6) FORMUL 4 MAN 4(C6 H12 O6) FORMUL 4 GAL 2(C6 H12 O6) FORMUL 8 HOH *349(H2 O) HELIX 1 AA1 LYS A 246 MET A 252 1 7 HELIX 2 AA2 LEU A 309 ASN A 315 1 7 HELIX 3 AA3 SER A 354 LYS A 360 5 7 HELIX 4 AA4 LYS A 414 GLY A 420 1 7 HELIX 5 AA5 LEU A 432 ASN A 434 5 3 HELIX 6 AA6 LYS B 246 MET B 252 1 7 HELIX 7 AA7 LEU B 309 ASN B 315 1 7 HELIX 8 AA8 SER B 354 LYS B 360 5 7 HELIX 9 AA9 LYS B 414 GLY B 420 1 7 HELIX 10 AB1 LEU B 432 TYR B 436 5 5 HELIX 11 AB2 THR C 62 SER C 66 5 5 HELIX 12 AB3 LYS C 114 THR C 116 5 3 HELIX 13 AB4 THR C 145 SER C 149 5 5 SHEET 1 AA1 4 SER A 239 PHE A 243 0 SHEET 2 AA1 4 GLU A 258 VAL A 266 -1 O VAL A 262 N PHE A 241 SHEET 3 AA1 4 TYR A 300 THR A 307 -1 O TYR A 300 N VAL A 266 SHEET 4 AA1 4 LYS A 288 THR A 289 -1 N LYS A 288 O VAL A 305 SHEET 1 AA2 4 SER A 239 PHE A 243 0 SHEET 2 AA2 4 GLU A 258 VAL A 266 -1 O VAL A 262 N PHE A 241 SHEET 3 AA2 4 TYR A 300 THR A 307 -1 O TYR A 300 N VAL A 266 SHEET 4 AA2 4 GLU A 293 GLU A 294 -1 N GLU A 293 O ARG A 301 SHEET 1 AA3 4 VAL A 282 VAL A 284 0 SHEET 2 AA3 4 LYS A 274 VAL A 279 -1 N VAL A 279 O VAL A 282 SHEET 3 AA3 4 TYR A 319 SER A 324 -1 O LYS A 320 N TYR A 278 SHEET 4 AA3 4 ILE A 332 ILE A 336 -1 O ILE A 332 N VAL A 323 SHEET 1 AA4 4 GLN A 347 LEU A 351 0 SHEET 2 AA4 4 GLN A 362 PHE A 372 -1 O LEU A 368 N TYR A 349 SHEET 3 AA4 4 PHE A 404 ASP A 413 -1 O PHE A 404 N PHE A 372 SHEET 4 AA4 4 TYR A 391 THR A 393 -1 N LYS A 392 O LYS A 409 SHEET 1 AA5 4 GLN A 347 LEU A 351 0 SHEET 2 AA5 4 GLN A 362 PHE A 372 -1 O LEU A 368 N TYR A 349 SHEET 3 AA5 4 PHE A 404 ASP A 413 -1 O PHE A 404 N PHE A 372 SHEET 4 AA5 4 VAL A 397 LEU A 398 -1 N VAL A 397 O PHE A 405 SHEET 1 AA6 4 GLN A 386 PRO A 387 0 SHEET 2 AA6 4 ALA A 378 SER A 383 -1 N SER A 383 O GLN A 386 SHEET 3 AA6 4 PHE A 423 MET A 428 -1 O SER A 426 N GLU A 380 SHEET 4 AA6 4 TYR A 436 LEU A 441 -1 O LYS A 439 N CYS A 425 SHEET 1 AA7 4 SER B 239 PHE B 243 0 SHEET 2 AA7 4 GLU B 258 VAL B 266 -1 O VAL B 262 N PHE B 241 SHEET 3 AA7 4 TYR B 300 THR B 307 -1 O TYR B 300 N VAL B 266 SHEET 4 AA7 4 LYS B 288 GLU B 294 -1 N LYS B 290 O VAL B 303 SHEET 1 AA8 4 VAL B 282 VAL B 284 0 SHEET 2 AA8 4 LYS B 274 VAL B 279 -1 N VAL B 279 O VAL B 282 SHEET 3 AA8 4 TYR B 319 SER B 324 -1 O LYS B 322 N ASN B 276 SHEET 4 AA8 4 ILE B 332 ILE B 336 -1 O ILE B 336 N TYR B 319 SHEET 1 AA9 4 GLN B 347 LEU B 351 0 SHEET 2 AA9 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 AA9 4 PHE B 404 ASP B 413 -1 O PHE B 404 N PHE B 372 SHEET 4 AA9 4 TYR B 391 THR B 393 -1 N LYS B 392 O LYS B 409 SHEET 1 AB1 4 GLN B 347 LEU B 351 0 SHEET 2 AB1 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 AB1 4 PHE B 404 ASP B 413 -1 O PHE B 404 N PHE B 372 SHEET 4 AB1 4 VAL B 397 LEU B 398 -1 N VAL B 397 O PHE B 405 SHEET 1 AB2 4 GLN B 386 PRO B 387 0 SHEET 2 AB2 4 ALA B 378 SER B 383 -1 N SER B 383 O GLN B 386 SHEET 3 AB2 4 PHE B 423 MET B 428 -1 O MET B 428 N ALA B 378 SHEET 4 AB2 4 THR B 437 LEU B 441 -1 O LYS B 439 N CYS B 425 SHEET 1 AB3 3 VAL C 9 GLU C 13 0 SHEET 2 AB3 3 VAL C 25 GLN C 30 -1 O THR C 26 N GLU C 13 SHEET 3 AB3 3 SER C 55 ILE C 58 -1 O ILE C 58 N VAL C 25 SHEET 1 AB4 5 SER C 18 LEU C 20 0 SHEET 2 AB4 5 VAL C 82 HIS C 87 1 O GLU C 85 N VAL C 19 SHEET 3 AB4 5 GLY C 67 THR C 73 -1 N GLY C 67 O LEU C 84 SHEET 4 AB4 5 THR C 40 HIS C 44 -1 N GLN C 41 O GLN C 72 SHEET 5 AB4 5 SER C 47 ILE C 49 -1 O ILE C 49 N TRP C 42 SHEET 1 AB5 3 LEU C 91 GLN C 94 0 SHEET 2 AB5 3 ILE C 106 SER C 112 -1 O ARG C 109 N GLN C 94 SHEET 3 AB5 3 PHE C 139 ILE C 141 -1 O ILE C 141 N ILE C 106 SHEET 1 AB6 5 VAL C 99 PHE C 100 0 SHEET 2 AB6 5 VAL C 168 ILE C 172 1 O THR C 171 N PHE C 100 SHEET 3 AB6 5 GLY C 150 VAL C 158 -1 N TYR C 152 O VAL C 168 SHEET 4 AB6 5 HIS C 119 GLN C 125 -1 N LEU C 124 O PHE C 153 SHEET 5 AB6 5 LYS C 128 HIS C 135 -1 O ARG C 130 N TYR C 123 SHEET 1 AB7 4 VAL C 99 PHE C 100 0 SHEET 2 AB7 4 VAL C 168 ILE C 172 1 O THR C 171 N PHE C 100 SHEET 3 AB7 4 GLY C 150 VAL C 158 -1 N TYR C 152 O VAL C 168 SHEET 4 AB7 4 LYS C 161 SER C 164 -1 O LYS C 161 N VAL C 158 SSBOND 1 CYS A 261 CYS A 321 1555 1555 2.06 SSBOND 2 CYS A 367 CYS A 425 1555 1555 2.03 SSBOND 3 CYS B 261 CYS B 321 1555 1555 2.04 SSBOND 4 CYS B 367 CYS B 425 1555 1555 2.04 SSBOND 5 CYS C 29 CYS C 71 1555 1555 2.00 SSBOND 6 CYS C 110 CYS C 154 1555 1555 2.06 LINK ND2 ASN A 297 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN B 297 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN C 45 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN C 162 C1 NAG F 1 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.43 LINK O6 BMA D 3 C1 MAN D 4 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 7 1555 1555 1.45 LINK O2 MAN D 4 C1 NAG D 5 1555 1555 1.43 LINK O4 NAG D 5 C1 GAL D 6 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.43 LINK O6 BMA E 3 C1 MAN E 4 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 7 1555 1555 1.45 LINK O2 MAN E 4 C1 NAG E 5 1555 1555 1.43 LINK O4 NAG E 5 C1 GAL E 6 1555 1555 1.44 LINK O2 MAN E 7 C1 NAG E 8 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.46 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 CISPEP 1 TYR A 373 PRO A 374 0 -5.73 CISPEP 2 TYR B 373 PRO B 374 0 -5.59 CISPEP 3 GLU C 13 PRO C 14 0 -0.10 CRYST1 123.629 49.388 139.415 90.00 103.04 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008089 0.000000 0.001873 0.00000 SCALE2 0.000000 0.020248 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007363 0.00000