HEADER SUGAR BINDING PROTEIN 16-AUG-18 6EFI TITLE SK678 BINDING REGION (SIGLEC + UNIQUE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: KXYKXGKXW SIGNAL DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 251-460; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS SANGUINIS SK678; SOURCE 3 ORGANISM_TAXID: 888819; SOURCE 4 GENE: SRPA, HMPREF9392_0959; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LECTIN, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.M.IVERSON REVDAT 2 01-JUN-22 6EFI 1 JRNL LINK REVDAT 1 19-FEB-20 6EFI 0 JRNL AUTH B.A.BENSING,H.E.STUBBS,R.AGARWAL,I.YAMAKAWA,K.LUONG, JRNL AUTH 2 K.SOLAKYILDIRIM,H.YU,A.HADADIANPOUR,M.A.CASTRO, JRNL AUTH 3 K.P.FIALKOWSKI,K.M.MORRISON,Z.WAWRZAK,X.CHEN,C.B.LEBRILLA, JRNL AUTH 4 J.BAUDRY,J.C.SMITH,P.M.SULLAM,T.M.IVERSON JRNL TITL ORIGINS OF GLYCAN SELECTIVITY IN STREPTOCOCCAL SIGLEC-LIKE JRNL TITL 2 ADHESINS SUGGEST MECHANISMS OF RECEPTOR ADAPTATION. JRNL REF NAT COMMUN V. 13 2753 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35585145 JRNL DOI 10.1038/S41467-022-30509-Y REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 42886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.640 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7279 - 4.1329 0.98 3134 151 0.1627 0.1718 REMARK 3 2 4.1329 - 3.2809 0.99 3108 155 0.1444 0.1822 REMARK 3 3 3.2809 - 2.8664 0.97 3021 142 0.1706 0.2087 REMARK 3 4 2.8664 - 2.6043 0.98 3066 147 0.1793 0.2038 REMARK 3 5 2.6043 - 2.4177 0.96 2992 144 0.1824 0.2122 REMARK 3 6 2.4177 - 2.2752 0.98 3029 145 0.1883 0.2405 REMARK 3 7 2.2752 - 2.1612 0.98 3055 149 0.1944 0.2304 REMARK 3 8 2.1612 - 2.0672 0.98 3041 151 0.1872 0.2177 REMARK 3 9 2.0672 - 1.9876 0.95 2913 144 0.2052 0.2513 REMARK 3 10 1.9876 - 1.9190 0.97 3039 141 0.2087 0.2244 REMARK 3 11 1.9190 - 1.8590 0.97 3017 156 0.2221 0.2676 REMARK 3 12 1.8590 - 1.8059 0.97 2986 140 0.2208 0.2500 REMARK 3 13 1.8059 - 1.7583 0.91 2816 143 0.2456 0.2958 REMARK 3 14 1.7583 - 1.7154 0.54 1678 83 0.2823 0.2638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3301 REMARK 3 ANGLE : 0.999 4487 REMARK 3 CHIRALITY : 0.064 524 REMARK 3 PLANARITY : 0.008 596 REMARK 3 DIHEDRAL : 16.503 1202 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1000236232. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45715 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE PH 7.6, 25% PEG 6000, REMARK 280 0.005 M HEXAMINE COBALT CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.78950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 247 REMARK 465 PRO A 248 REMARK 465 GLY A 249 REMARK 465 SER A 250 REMARK 465 ASP A 251 REMARK 465 VAL A 252 REMARK 465 ALA A 253 REMARK 465 ASN A 254 REMARK 465 ALA A 255 REMARK 465 GLY B 247 REMARK 465 PRO B 248 REMARK 465 GLY B 249 REMARK 465 SER B 250 REMARK 465 ASP B 251 REMARK 465 VAL B 252 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 256 CG1 CG2 REMARK 470 LYS A 301 CG CD CE NZ REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 GLN A 329 CG CD OE1 NE2 REMARK 470 ARG A 364 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 254 CG OD1 ND2 REMARK 470 LYS B 302 CG CD CE NZ REMARK 470 ARG B 364 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 825 O HOH B 856 2.14 REMARK 500 O HOH A 601 O HOH A 815 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 265 -119.00 -122.16 REMARK 500 LEU A 374 -124.18 -98.24 REMARK 500 ASN A 403 80.56 -153.45 REMARK 500 SER A 444 -5.98 83.31 REMARK 500 ALA B 326 58.80 -150.28 REMARK 500 LEU B 374 -118.07 -101.05 REMARK 500 SER B 444 -4.12 82.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 409 0.10 SIDE CHAIN REMARK 500 ARG B 417 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 842 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 871 DISTANCE = 6.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 257 OD1 REMARK 620 2 ASP A 257 OD2 51.1 REMARK 620 3 GLU A 259 O 79.4 127.6 REMARK 620 4 ASP A 284 OD1 161.0 142.3 90.1 REMARK 620 5 ASP A 284 OD2 136.2 90.3 142.1 52.0 REMARK 620 6 ASN A 285 OD1 81.3 89.9 99.4 84.9 78.5 REMARK 620 7 ASP A 357 OD2 105.8 91.0 86.8 89.2 93.0 171.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 502 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 745 O REMARK 620 2 HOH A 765 O 92.9 REMARK 620 3 HOH A 787 O 95.1 84.5 REMARK 620 4 HOH B 671 O 81.4 174.3 95.4 REMARK 620 5 HOH B 773 O 91.0 90.9 172.5 89.7 REMARK 620 6 HOH B 813 O 175.8 88.1 89.0 97.6 84.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 257 OD1 REMARK 620 2 ASP B 257 OD2 52.7 REMARK 620 3 GLU B 259 O 83.4 131.4 REMARK 620 4 ASP B 284 OD1 163.4 137.0 90.9 REMARK 620 5 ASP B 284 OD2 132.5 86.7 141.8 50.9 REMARK 620 6 ASN B 285 OD1 78.5 93.8 97.0 86.7 81.3 REMARK 620 7 ASP B 357 OD2 101.7 83.6 86.5 93.5 96.2 176.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 513 DBREF 6EFI A 251 460 UNP F0FS71 F0FS71_STRSA 251 460 DBREF 6EFI B 251 460 UNP F0FS71 F0FS71_STRSA 251 460 SEQADV 6EFI GLY A 247 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI PRO A 248 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI GLY A 249 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI SER A 250 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI GLY B 247 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI PRO B 248 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI GLY B 249 UNP F0FS71 EXPRESSION TAG SEQADV 6EFI SER B 250 UNP F0FS71 EXPRESSION TAG SEQRES 1 A 214 GLY PRO GLY SER ASP VAL ALA ASN ALA VAL ASP THR GLU SEQRES 2 A 214 ALA PRO GLN VAL LYS THR GLY ASP TYR VAL VAL TYR ARG SEQRES 3 A 214 GLY GLU SER PHE GLU PHE TYR ALA GLU ILE THR ASP ASN SEQRES 4 A 214 SER GLY GLN VAL ASN ASP VAL VAL VAL ARG ASN VAL GLU SEQRES 5 A 214 LEU ASP LYS LYS THR SER GLN PRO TYR LEU THR PRO GLY SEQRES 6 A 214 PHE ILE LYS PHE SER THR ASP ASN LEU GLY LEU PRO GLY SEQRES 7 A 214 ASN ALA THR VAL GLN ASN PRO LEU ARG THR LYS ILE PHE SEQRES 8 A 214 GLY THR VAL PRO LEU ASN GLU GLY ILE GLY TYR TYR THR SEQRES 9 A 214 ARG TYR VAL VAL PRO THR ASP SER ASN GLY ASN THR THR SEQRES 10 A 214 ARG MET VAL GLN ASN ASP ASN ARG ASN GLY LEU GLU ARG SEQRES 11 A 214 PHE ILE ILE THR ILE LYS THR GLN ASN GLU LYS TYR ASN SEQRES 12 A 214 PRO ALA ASP PRO ALA ILE THR TYR VAL ASN GLN LEU SER SEQRES 13 A 214 ASN LEU SER GLN ALA GLU ARG ASP ALA VAL ALA ALA ALA SEQRES 14 A 214 VAL ARG THR ALA ASN PRO GLN ILE PRO ALA ALA ALA ARG SEQRES 15 A 214 ILE THR VAL SER ALA ASN GLY THR VAL THR ILE THR TYR SEQRES 16 A 214 PRO ASP SER SER THR ASP THR ILE PRO ALA ASP ARG VAL SEQRES 17 A 214 VAL LYS ASP LEU ALA SER SEQRES 1 B 214 GLY PRO GLY SER ASP VAL ALA ASN ALA VAL ASP THR GLU SEQRES 2 B 214 ALA PRO GLN VAL LYS THR GLY ASP TYR VAL VAL TYR ARG SEQRES 3 B 214 GLY GLU SER PHE GLU PHE TYR ALA GLU ILE THR ASP ASN SEQRES 4 B 214 SER GLY GLN VAL ASN ASP VAL VAL VAL ARG ASN VAL GLU SEQRES 5 B 214 LEU ASP LYS LYS THR SER GLN PRO TYR LEU THR PRO GLY SEQRES 6 B 214 PHE ILE LYS PHE SER THR ASP ASN LEU GLY LEU PRO GLY SEQRES 7 B 214 ASN ALA THR VAL GLN ASN PRO LEU ARG THR LYS ILE PHE SEQRES 8 B 214 GLY THR VAL PRO LEU ASN GLU GLY ILE GLY TYR TYR THR SEQRES 9 B 214 ARG TYR VAL VAL PRO THR ASP SER ASN GLY ASN THR THR SEQRES 10 B 214 ARG MET VAL GLN ASN ASP ASN ARG ASN GLY LEU GLU ARG SEQRES 11 B 214 PHE ILE ILE THR ILE LYS THR GLN ASN GLU LYS TYR ASN SEQRES 12 B 214 PRO ALA ASP PRO ALA ILE THR TYR VAL ASN GLN LEU SER SEQRES 13 B 214 ASN LEU SER GLN ALA GLU ARG ASP ALA VAL ALA ALA ALA SEQRES 14 B 214 VAL ARG THR ALA ASN PRO GLN ILE PRO ALA ALA ALA ARG SEQRES 15 B 214 ILE THR VAL SER ALA ASN GLY THR VAL THR ILE THR TYR SEQRES 16 B 214 PRO ASP SER SER THR ASP THR ILE PRO ALA ASP ARG VAL SEQRES 17 B 214 VAL LYS ASP LEU ALA SER HET CA A 501 1 HET CO A 502 1 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 6 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET CA B 501 1 HET GOL B 502 6 HET GOL B 503 6 HET GOL B 504 6 HET GOL B 505 6 HET GOL B 506 6 HET EDO B 507 4 HET EDO B 508 4 HET EDO B 509 4 HET EDO B 510 4 HET EDO B 511 4 HET EDO B 512 4 HET EDO B 513 4 HETNAM CA CALCIUM ION HETNAM CO COBALT (II) ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CA 2(CA 2+) FORMUL 4 CO CO 2+ FORMUL 5 GOL 8(C3 H8 O3) FORMUL 8 EDO 13(C2 H6 O2) FORMUL 27 HOH *513(H2 O) HELIX 1 AA1 ASN A 368 ASN A 372 5 5 HELIX 2 AA2 THR A 383 TYR A 388 5 6 HELIX 3 AA3 SER A 405 ASN A 420 1 16 HELIX 4 AA4 PRO A 450 ARG A 453 5 4 HELIX 5 AA5 ASN B 368 ASN B 372 5 5 HELIX 6 AA6 THR B 383 TYR B 388 5 6 HELIX 7 AA7 SER B 405 ASN B 420 1 16 HELIX 8 AA8 PRO B 450 ARG B 453 5 4 SHEET 1 AA1 4 GLN A 262 LYS A 264 0 SHEET 2 AA1 4 SER A 275 THR A 283 -1 O GLU A 281 N LYS A 264 SHEET 3 AA1 4 LEU A 332 THR A 339 -1 O LEU A 332 N ILE A 282 SHEET 4 AA1 4 LYS A 314 THR A 317 -1 N SER A 316 O LYS A 335 SHEET 1 AA2 4 ASP A 267 TYR A 271 0 SHEET 2 AA2 4 ARG A 376 LYS A 382 1 O THR A 380 N VAL A 270 SHEET 3 AA2 4 GLY A 347 ASP A 357 -1 N GLY A 347 O ILE A 381 SHEET 4 AA2 4 VAL A 289 ARG A 295 -1 N VAL A 293 O VAL A 354 SHEET 1 AA3 2 THR A 396 VAL A 398 0 SHEET 2 AA3 2 VAL A 455 ASP A 457 1 O LYS A 456 N VAL A 398 SHEET 1 AA4 3 ARG A 428 VAL A 431 0 SHEET 2 AA4 3 VAL A 437 THR A 440 -1 O THR A 440 N ARG A 428 SHEET 3 AA4 3 THR A 446 ILE A 449 -1 O ASP A 447 N ILE A 439 SHEET 1 AA5 4 GLN B 262 LYS B 264 0 SHEET 2 AA5 4 SER B 275 THR B 283 -1 O THR B 283 N GLN B 262 SHEET 3 AA5 4 LEU B 332 THR B 339 -1 O ILE B 336 N PHE B 278 SHEET 4 AA5 4 LYS B 314 THR B 317 -1 N LYS B 314 O PHE B 337 SHEET 1 AA6 4 TYR B 268 TYR B 271 0 SHEET 2 AA6 4 ARG B 376 LYS B 382 1 O THR B 380 N VAL B 270 SHEET 3 AA6 4 GLY B 347 ASP B 357 -1 N GLY B 347 O ILE B 381 SHEET 4 AA6 4 VAL B 289 ARG B 295 -1 N VAL B 293 O VAL B 354 SHEET 1 AA7 2 THR B 396 VAL B 398 0 SHEET 2 AA7 2 VAL B 455 ASP B 457 1 O LYS B 456 N VAL B 398 SHEET 1 AA8 3 ARG B 428 VAL B 431 0 SHEET 2 AA8 3 VAL B 437 THR B 440 -1 O THR B 440 N ARG B 428 SHEET 3 AA8 3 THR B 446 ILE B 449 -1 O ASP B 447 N ILE B 439 LINK OD1 ASP A 257 CA CA A 501 1555 1555 2.66 LINK OD2 ASP A 257 CA CA A 501 1555 1555 2.40 LINK O GLU A 259 CA CA A 501 1555 1555 2.29 LINK OD1 ASP A 284 CA CA A 501 1555 1555 2.50 LINK OD2 ASP A 284 CA CA A 501 1555 1555 2.50 LINK OD1 ASN A 285 CA CA A 501 1555 1555 2.41 LINK OD2 ASP A 357 CA CA A 501 1555 1555 2.34 LINK CO CO A 502 O HOH A 745 1555 1555 2.30 LINK CO CO A 502 O HOH A 765 1555 1555 2.31 LINK CO CO A 502 O HOH A 787 1555 1555 2.24 LINK CO CO A 502 O HOH B 671 1555 2544 2.33 LINK CO CO A 502 O HOH B 773 1555 2544 2.05 LINK CO CO A 502 O HOH B 813 1555 2544 2.33 LINK OD1 ASP B 257 CA CA B 501 1555 1555 2.56 LINK OD2 ASP B 257 CA CA B 501 1555 1555 2.38 LINK O GLU B 259 CA CA B 501 1555 1555 2.25 LINK OD1 ASP B 284 CA CA B 501 1555 1555 2.56 LINK OD2 ASP B 284 CA CA B 501 1555 1555 2.43 LINK OD1 ASN B 285 CA CA B 501 1555 1555 2.37 LINK OD2 ASP B 357 CA CA B 501 1555 1555 2.34 CISPEP 1 THR A 309 PRO A 310 0 -8.86 CISPEP 2 THR B 309 PRO B 310 0 -4.66 SITE 1 AC1 5 ASP A 257 GLU A 259 ASP A 284 ASN A 285 SITE 2 AC1 5 ASP A 357 SITE 1 AC2 3 HOH A 745 HOH A 765 HOH A 787 SITE 1 AC3 5 GLY A 345 ILE A 346 GLY A 347 TYR A 348 SITE 2 AC3 5 TYR A 349 SITE 1 AC4 5 ASP A 410 ALA A 413 ILE A 429 THR A 430 SITE 2 AC4 5 VAL A 431 SITE 1 AC5 5 ALA A 413 ARG A 417 ILE A 429 HOH A 644 SITE 2 AC5 5 HOH A 741 SITE 1 AC6 3 GLY A 266 ASP A 267 SER B 304 SITE 1 AC7 6 THR A 265 TYR A 268 PHE A 278 TYR A 279 SITE 2 AC7 6 HOH A 631 HOH A 735 SITE 1 AC8 2 SER A 275 HOH A 696 SITE 1 AC9 4 VAL A 269 LYS A 382 HOH A 615 GLN B 305 SITE 1 AD1 3 THR A 446 ASP A 447 THR A 448 SITE 1 AD2 3 GLN A 262 GLU A 281 HOH A 730 SITE 1 AD3 5 ASP B 257 GLU B 259 ASP B 284 ASN B 285 SITE 2 AD3 5 ASP B 357 SITE 1 AD4 6 ASN B 285 THR B 327 VAL B 328 GLN B 329 SITE 2 AD4 6 HOH B 661 HOH B 692 SITE 1 AD5 5 GLU B 298 TYR B 349 ARG B 351 SER B 460 SITE 2 AD5 5 HOH B 720 SITE 1 AD6 7 ILE B 346 GLY B 347 TYR B 348 TYR B 349 SITE 2 AD6 7 SER B 460 HOH B 675 HOH B 701 SITE 1 AD7 2 LYS B 456 HOH B 770 SITE 1 AD8 5 ASN A 368 ASN A 370 ALA B 426 ALA B 427 SITE 2 AD8 5 HOH B 657 SITE 1 AD9 3 PRO B 310 TYR B 349 HOH B 623 SITE 1 AE1 2 ASP B 410 VAL B 431 SITE 1 AE2 5 TYR B 388 ASN B 389 PRO B 390 ASP B 447 SITE 2 AE2 5 HOH B 631 SITE 1 AE3 4 ASN B 343 GLU B 344 GLY B 345 HOH B 623 SITE 1 AE4 3 LYS B 314 HOH B 626 HOH B 818 SITE 1 AE5 2 ARG B 428 THR B 440 SITE 1 AE6 2 ASN B 403 HOH B 663 CRYST1 59.624 59.579 61.832 90.00 100.74 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016772 0.000000 0.003180 0.00000 SCALE2 0.000000 0.016784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016461 0.00000