HEADER TRANSFERASE 12-SEP-17 6EGW TITLE CRYSTAL STRUCTURE OF THE PROTEIN-KINASE A CATALYTIC SUBUNIT FROM TITLE 2 CRITECULUS GRISEUS IN COMPLEX WITH COMPOUNDS RKP017 AND RKP117 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: PKI 5-22 WITH S9RBS MUTATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 ORGAN: OVARY; SOURCE 6 TISSUE: OVARY; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 12 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 13 ORGANISM_TAXID: 10029 KEYWDS COMPLEX, PEPTIDIC LIGAND, RIBOSE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.MUELLER,A.HEINE,G.KLEBE REVDAT 3 29-JUL-20 6EGW 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 15-MAY-19 6EGW 1 COMPND JRNL REVDAT 1 10-OCT-18 6EGW 0 JRNL AUTH J.M.MUELLER,R.KIRSCHNER,A.GEYER,G.KLEBE JRNL TITL CONCEPTIONAL DESIGN OF SELF-ASSEMBLING BISUBSTRATE-LIKE JRNL TITL 2 INHIBITORS OF PROTEIN KINASE A RESULTING IN A BORONIC ACID JRNL TITL 3 GLUTAMATE LINKAGE JRNL REF ACS OMEGA 2019 JRNL REFN ESSN 2470-1343 JRNL DOI 10.1021/ACSOMEGA.8B02364 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 38853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.6290 - 4.1833 0.97 2797 148 0.1696 0.1677 REMARK 3 2 4.1833 - 3.3208 1.00 2737 144 0.1564 0.1856 REMARK 3 3 3.3208 - 2.9012 0.96 2617 137 0.1774 0.2038 REMARK 3 4 2.9012 - 2.6360 1.00 2689 142 0.1842 0.1865 REMARK 3 5 2.6360 - 2.4471 0.99 2670 140 0.1676 0.2178 REMARK 3 6 2.4471 - 2.3028 0.99 2666 141 0.1622 0.2000 REMARK 3 7 2.3028 - 2.1875 1.00 2651 139 0.1629 0.2468 REMARK 3 8 2.1875 - 2.0923 0.94 2513 133 0.1675 0.2047 REMARK 3 9 2.0923 - 2.0117 0.99 2617 137 0.1781 0.2047 REMARK 3 10 2.0117 - 1.9423 0.99 2640 139 0.1749 0.2230 REMARK 3 11 1.9423 - 1.8816 0.99 2642 139 0.1739 0.2757 REMARK 3 12 1.8816 - 1.8278 0.98 2622 138 0.1837 0.2271 REMARK 3 13 1.8278 - 1.7797 0.99 2590 136 0.1982 0.2548 REMARK 3 14 1.7797 - 1.7363 0.93 2460 129 0.2393 0.3078 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2968 REMARK 3 ANGLE : 1.013 4035 REMARK 3 CHIRALITY : 0.056 429 REMARK 3 PLANARITY : 0.007 538 REMARK 3 DIHEDRAL : 17.697 1761 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4889 31.3732 14.6521 REMARK 3 T TENSOR REMARK 3 T11: 0.1635 T22: 0.1861 REMARK 3 T33: 0.2182 T12: -0.0259 REMARK 3 T13: -0.0360 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.0119 L22: 0.0830 REMARK 3 L33: 0.0493 L12: -0.0361 REMARK 3 L13: -0.0248 L23: 0.0673 REMARK 3 S TENSOR REMARK 3 S11: -0.1194 S12: 0.0865 S13: 0.1113 REMARK 3 S21: -0.0372 S22: -0.0030 S23: -0.2803 REMARK 3 S31: -0.0745 S32: 0.0769 S33: -0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6201 15.3633 -3.8543 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.2051 REMARK 3 T33: 0.1607 T12: 0.0080 REMARK 3 T13: 0.0214 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.1783 L22: 0.0964 REMARK 3 L33: 0.0601 L12: -0.1310 REMARK 3 L13: -0.0084 L23: 0.0006 REMARK 3 S TENSOR REMARK 3 S11: -0.0121 S12: 0.1027 S13: 0.0092 REMARK 3 S21: 0.0036 S22: 0.0637 S23: 0.1089 REMARK 3 S31: 0.0032 S32: -0.0254 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8425 13.8288 -2.4791 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.1854 REMARK 3 T33: 0.1800 T12: 0.0168 REMARK 3 T13: -0.0142 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.0608 L22: 0.1491 REMARK 3 L33: 0.0795 L12: 0.0436 REMARK 3 L13: 0.0722 L23: 0.0714 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: 0.0444 S13: 0.0162 REMARK 3 S21: -0.1101 S22: 0.0033 S23: -0.0409 REMARK 3 S31: 0.0792 S32: 0.0263 S33: -0.0053 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3287 15.8454 9.0226 REMARK 3 T TENSOR REMARK 3 T11: 0.1186 T22: 0.1353 REMARK 3 T33: 0.1311 T12: 0.0115 REMARK 3 T13: -0.0089 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.0999 L22: 0.0082 REMARK 3 L33: 0.3826 L12: 0.0128 REMARK 3 L13: 0.0150 L23: -0.0625 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: 0.0673 S13: -0.0444 REMARK 3 S21: -0.0110 S22: -0.0243 S23: 0.0131 REMARK 3 S31: 0.0372 S32: 0.0909 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1549 16.2931 20.6061 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.1140 REMARK 3 T33: 0.1157 T12: 0.0065 REMARK 3 T13: -0.0012 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.2522 L22: 0.0881 REMARK 3 L33: 0.1041 L12: 0.1422 REMARK 3 L13: -0.0369 L23: -0.0432 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: 0.0325 S13: -0.0754 REMARK 3 S21: 0.0222 S22: -0.0707 S23: -0.0062 REMARK 3 S31: 0.0506 S32: 0.0247 S33: -0.0100 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2068 26.3839 20.5733 REMARK 3 T TENSOR REMARK 3 T11: 0.1453 T22: 0.1001 REMARK 3 T33: 0.1393 T12: 0.0159 REMARK 3 T13: 0.0079 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.1765 L22: 0.2208 REMARK 3 L33: 0.1548 L12: 0.1398 REMARK 3 L13: 0.0851 L23: -0.0599 REMARK 3 S TENSOR REMARK 3 S11: -0.0030 S12: 0.0055 S13: 0.0523 REMARK 3 S21: 0.0675 S22: -0.0064 S23: -0.0115 REMARK 3 S31: -0.0755 S32: 0.0395 S33: -0.0302 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0701 15.6049 27.6022 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.0896 REMARK 3 T33: 0.2015 T12: -0.0022 REMARK 3 T13: 0.0364 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.3573 L22: 0.0908 REMARK 3 L33: 0.2913 L12: 0.1088 REMARK 3 L13: -0.1891 L23: -0.1593 REMARK 3 S TENSOR REMARK 3 S11: 0.1405 S12: -0.1633 S13: 0.0311 REMARK 3 S21: 0.2568 S22: -0.1208 S23: 0.3861 REMARK 3 S31: -0.0626 S32: -0.0080 S33: 0.0060 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 251 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6181 12.1808 38.2932 REMARK 3 T TENSOR REMARK 3 T11: 0.2393 T22: 0.1698 REMARK 3 T33: 0.1015 T12: 0.0006 REMARK 3 T13: 0.0421 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 0.1246 L22: 0.9239 REMARK 3 L33: 0.0956 L12: 0.0716 REMARK 3 L13: -0.0006 L23: 0.2850 REMARK 3 S TENSOR REMARK 3 S11: 0.0658 S12: -0.2199 S13: 0.0086 REMARK 3 S21: 0.4100 S22: -0.0399 S23: -0.0317 REMARK 3 S31: -0.0238 S32: -0.0724 S33: 0.0449 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4675 17.3437 30.6366 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.1553 REMARK 3 T33: 0.1444 T12: -0.0279 REMARK 3 T13: -0.0130 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.3251 L22: 0.3046 REMARK 3 L33: 0.6200 L12: 0.0548 REMARK 3 L13: 0.2358 L23: -0.2456 REMARK 3 S TENSOR REMARK 3 S11: -0.0423 S12: -0.2147 S13: 0.0124 REMARK 3 S21: 0.2287 S22: -0.0508 S23: -0.0447 REMARK 3 S31: 0.0065 S32: 0.1700 S33: -0.0548 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9740 13.7508 -2.5222 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.1677 REMARK 3 T33: 0.1445 T12: -0.0037 REMARK 3 T13: -0.0360 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.1469 L22: 0.2102 REMARK 3 L33: 0.3139 L12: 0.1058 REMARK 3 L13: -0.0867 L23: 0.1406 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.0752 S13: -0.0529 REMARK 3 S21: 0.0698 S22: 0.0609 S23: 0.2166 REMARK 3 S31: 0.0897 S32: -0.1244 S33: 0.0219 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 8 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1476 2.9708 28.6672 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: 0.1629 REMARK 3 T33: 0.1787 T12: -0.0112 REMARK 3 T13: 0.0422 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.0173 L22: 0.0115 REMARK 3 L33: 0.0107 L12: 0.0134 REMARK 3 L13: -0.0057 L23: -0.0070 REMARK 3 S TENSOR REMARK 3 S11: 0.1800 S12: -0.0325 S13: 0.0920 REMARK 3 S21: 0.0628 S22: -0.0002 S23: 0.1359 REMARK 3 S31: -0.1241 S32: 0.0459 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6113 11.5277 17.3231 REMARK 3 T TENSOR REMARK 3 T11: 0.1418 T22: 0.1214 REMARK 3 T33: 0.2150 T12: -0.0095 REMARK 3 T13: -0.0222 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.0031 L22: 0.0153 REMARK 3 L33: 0.0027 L12: 0.0005 REMARK 3 L13: -0.0024 L23: 0.0055 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: 0.0284 S13: -0.0270 REMARK 3 S21: -0.0249 S22: 0.0483 S23: 0.1196 REMARK 3 S31: 0.1647 S32: -0.0061 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EGW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1200006609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38857 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 41.617 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 5.570 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 23.2200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.66 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48600 REMARK 200 FOR SHELL : 3.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES-BIS-TRIS, 75 MM LITHIUM REMARK 280 CHLORIDE, 1 MM DTT, 0.1 MM SODIUM EDTA, 0.25 MM MEGA 8, 0.7 MM REMARK 280 PEPTIDIC LIGAND, 5 MM RKP117, 18% V/V METHANOL/WATER IN REMARK 280 RESERVOIR, PH 6.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.26950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.09000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.06700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.09000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.26950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.06700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 SEP A 10 REMARK 465 GLU A 11 REMARK 465 GLN A 12 REMARK 465 SER A 252 REMARK 465 PRO A 321 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 SER A 14 OG REMARK 470 VAL A 15 CG1 CG2 REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 PHE A 18 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 LYS A 23 CE NZ REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 61 NZ REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 LYS A 78 CE NZ REMARK 470 LYS A 81 CD CE NZ REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 ILE A 135 CD1 REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 GLN A 177 CG CD OE1 NE2 REMARK 470 LYS A 192 CE NZ REMARK 470 SER A 212 OG REMARK 470 LYS A 217 CD CE NZ REMARK 470 ASP A 241 CG OD1 OD2 REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 GLN A 245 CG CD OE1 NE2 REMARK 470 LYS A 249 NZ REMARK 470 VAL A 251 CG1 CG2 REMARK 470 VAL A 255 CG1 CG2 REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 279 CE NZ REMARK 470 LYS A 285 CE NZ REMARK 470 LYS A 295 CE NZ REMARK 470 ILE A 303 CD1 REMARK 470 LYS A 309 CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 339 CG1 CG2 CD1 REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 ILE B 25 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 16 O4 RIB B 101 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 199 CB CYS A 199 SG -0.117 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 144 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 144 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 273 46.70 -86.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 RIB B 101 DBREF 6EGW A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 6EGW B 8 25 PDB 6EGW 6EGW 8 25 SEQADV 6EGW GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 6EGW HIS A -1 UNP P25321 EXPRESSION TAG SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SEP GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 B 18 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 18 ARG ARG ASN ALA ILE MODRES 6EGW SEP A 139 SER MODIFIED RESIDUE MODRES 6EGW TPO A 197 THR MODIFIED RESIDUE MODRES 6EGW SEP A 338 SER MODIFIED RESIDUE HET SEP A 139 14 HET TPO A 197 17 HET SEP A 338 14 HET 9LQ A 401 54 HET RIB B 101 3 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM 9LQ [2-[(4-ISOQUINOLIN-5-YLSULFONYL-1,4-DIAZEPAN-1-YL) HETNAM 2 9LQ METHYL]PHENYL]BORONIC ACID HETNAM RIB ALPHA-D-RIBOFURANOSE HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 9LQ C21 H24 B N3 O4 S FORMUL 4 RIB C5 H10 O5 FORMUL 5 HOH *202(H2 O) HELIX 1 AA1 GLU A 13 SER A 32 1 20 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 VAL A 98 1 15 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SEP A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 VAL A 251 1 10 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 VAL A 288 ASN A 293 1 6 HELIX 14 AB5 HIS A 294 ALA A 298 5 5 HELIX 15 AB6 ASP A 301 GLN A 307 1 7 HELIX 16 AB7 GLY A 344 THR A 348 5 5 HELIX 17 AB8 THR B 9 GLY B 17 1 9 SHEET 1 AA1 5 PHE A 43 THR A 51 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O LEU A 59 N LYS A 47 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O ILE A 73 N ARG A 56 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 120 N ALA A 70 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N PHE A 108 O VAL A 119 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C PHE A 138 N SEP A 139 1555 1555 1.33 LINK C SEP A 139 N GLU A 140 1555 1555 1.33 LINK C TRP A 196 N TPO A 197 1555 1555 1.33 LINK C TPO A 197 N LEU A 198 1555 1555 1.34 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 LINK OG SER B 16 C1 RIB B 101 1555 1555 1.38 CRYST1 68.539 72.134 76.180 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014590 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013863 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013127 0.00000