HEADER MEMBRANE PROTEIN 13-SEP-17 6EHE TITLE OMPTDELTAL8 (LOOP L8 DELETION MUTANT OF OMPT), AN OUTER MEMBRANE TITLE 2 PROTEIN OF VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OMPT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: OMPTDELTAL8 IS 18 RESIDUE DELETION FROM THE L8 LOOP OF COMPND 6 OMPT (THR294 TO THR309, IN MATURE SEQUENCE). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1 (STRAIN ATCC 39541 SOURCE 3 / CLASSICAL OGAWA 395 / O395); SOURCE 4 ORGANISM_TAXID: 345073; SOURCE 5 GENE: OMPT, VC0395_A1445; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS OUTER MEMBRANE PROTEIN, PORIN, OMPF OR OMPC ORTHOLOG, ION-TRANSPORT, KEYWDS 2 MEMBRANE BETA BARREL, ION-CHANNEL, MEMBRANE PROTEIN, DIFFUSION KEYWDS 3 PORIN, DIFFUSION CHANNEL, NON-SPECIFIC PORIN. EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG,M.PATHANIA REVDAT 4 17-JAN-24 6EHE 1 REMARK REVDAT 3 03-OCT-18 6EHE 1 REMARK REVDAT 2 09-MAY-18 6EHE 1 JRNL REVDAT 1 25-APR-18 6EHE 0 JRNL AUTH M.PATHANIA,S.ACOSTA-GUTIERREZ,S.P.BHAMIDIMARRI,A.BASLE, JRNL AUTH 2 M.WINTERHALTER,M.CECCARELLI,B.VAN DEN BERG JRNL TITL UNUSUAL CONSTRICTION ZONES IN THE MAJOR PORINS OMPU AND OMPT JRNL TITL 2 FROM VIBRIO CHOLERAE. JRNL REF STRUCTURE V. 26 708 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 29657131 JRNL DOI 10.1016/J.STR.2018.03.010 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 3 NUMBER OF REFLECTIONS : 18684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.2842 - 4.2006 1.00 3572 196 0.2133 0.2483 REMARK 3 2 4.2006 - 3.3343 0.99 3419 174 0.2124 0.2658 REMARK 3 3 3.3343 - 2.9129 0.99 3386 157 0.2477 0.3085 REMARK 3 4 2.9129 - 2.6465 0.99 3395 165 0.2502 0.3053 REMARK 3 5 2.6465 - 2.4569 0.78 2629 139 0.2568 0.3141 REMARK 3 6 2.4569 - 2.3120 0.41 1378 74 0.2155 0.2792 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2472 REMARK 3 ANGLE : 1.113 3320 REMARK 3 CHIRALITY : 0.065 341 REMARK 3 PLANARITY : 0.006 429 REMARK 3 DIHEDRAL : 10.466 1884 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1200006616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18688 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 85.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6EHD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 MAGNESIUM ACETATE, 0.1 M GLYCINE, REMARK 280 32% PEG 400, PH 9.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.74000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.84000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.20500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.84000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.74000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.20500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 21.74000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.20500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 85.84000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.20500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 21.74000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.84000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 536 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 294A REMARK 465 GLY A 294B REMARK 465 TYR A 294C REMARK 465 THR A 294D REMARK 465 ASN A 294E REMARK 465 LYS A 294F REMARK 465 GLY A 294G REMARK 465 SER A 294H REMARK 465 ASP A 294I REMARK 465 ALA A 294J REMARK 465 GLU A 294K REMARK 465 VAL A 294L REMARK 465 LYS A 294M REMARK 465 ALA A 294N REMARK 465 THR A 294O REMARK 465 LYS A 294P REMARK 465 GLY A 294Q REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 294 CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 530 O HOH A 532 2.01 REMARK 500 N LYS A 244 O HOH A 501 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 507 O HOH A 507 6775 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 79 CB PHE A 79 CG -0.198 REMARK 500 PHE A 79 CE2 PHE A 79 CD2 -0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 50 114.22 -163.36 REMARK 500 LYS A 61 -157.31 51.13 REMARK 500 ASN A 78 6.63 -63.78 REMARK 500 TYR A 95 -139.00 64.90 REMARK 500 PHE A 102 -56.39 -122.28 REMARK 500 SER A 120 76.60 -154.15 REMARK 500 ALA A 128 -146.33 -108.43 REMARK 500 SER A 130 44.43 38.61 REMARK 500 ASP A 142 33.47 25.09 REMARK 500 ASN A 143 26.15 43.54 REMARK 500 ALA A 173 60.24 -153.52 REMARK 500 ALA A 242 -164.03 -129.74 REMARK 500 THR A 293 90.49 -64.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 401 REMARK 610 C8E A 402 REMARK 610 C8E A 403 REMARK 610 C8E A 404 REMARK 610 C8E A 405 REMARK 610 C8E A 406 REMARK 610 C8E A 407 REMARK 610 C8E A 408 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C8E A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 411 DBREF1 6EHE A 7 310 UNP A0A0H3AME7_VIBC3 DBREF2 6EHE A A0A0H3AME7 50 368 SEQADV 6EHE GLY A 294Q UNP A0A0H3AME VAL 354 CONFLICT SEQADV 6EHE TYR A 308 UNP A0A0H3AME ILE 366 CONFLICT SEQRES 1 A 319 ASP ALA GLY THR VAL ASP PHE TYR GLY GLN LEU ARG THR SEQRES 2 A 319 GLU LEU LYS PHE LEU GLU ASP LYS ASP PRO THR ILE GLY SEQRES 3 A 319 SER GLY SER SER ARG ALA GLY VAL ASP ALA ASN TYR THR SEQRES 4 A 319 VAL ASN ASP SER LEU ALA LEU GLN GLY LYS VAL GLU PHE SEQRES 5 A 319 ALA LEU LYS ASP SER GLY ASP MET TYR VAL ARG ASN HIS SEQRES 6 A 319 ILE LEU GLY VAL LYS THR ASN PHE GLY LYS PHE SER PHE SEQRES 7 A 319 GLY LYS GLN TRP THR THR SER ASP ASP VAL TYR GLY ALA SEQRES 8 A 319 ASP TYR SER TYR PHE PHE GLY GLY THR GLY LEU ARG TYR SEQRES 9 A 319 GLY THR LEU SER ASP ALA LEU HIS ASP SER GLN VAL LYS SEQRES 10 A 319 TYR VAL TYR GLU ALA ASP SER PHE TRP VAL LYS ALA GLY SEQRES 11 A 319 TYR GLY PHE PRO GLU ASP ASN ALA LYS GLN GLU LEU ALA SEQRES 12 A 319 GLU LEU TYR VAL GLY ALA THR PHE GLY ASP LEU ALA VAL SEQRES 13 A 319 HIS ALA GLY GLY GLY GLN ASN ARG ASP LYS ALA PHE LYS SEQRES 14 A 319 VAL GLY SER ASN THR VAL GLY THR THR THR THR ASP ILE SEQRES 15 A 319 LYS ALA ASP VAL THR ASN SER TYR PHE GLU VAL THR GLY SEQRES 16 A 319 GLU TYR THR ILE GLY ASP ALA LEU ILE GLY VAL THR TYR SEQRES 17 A 319 TYR ASN ALA GLU LEU ASP VAL GLU ASN ASN PRO LEU VAL SEQRES 18 A 319 ILE ASP GLU ASP ALA ILE SER VAL ALA GLY THR TYR LYS SEQRES 19 A 319 VAL ALA ASP LYS THR LYS LEU TYR ALA GLY TYR GLU TYR SEQRES 20 A 319 VAL MET GLN GLU ALA ASN THR GLY ALA ASP GLU ASP GLY SEQRES 21 A 319 THR LEU VAL TYR LEU GLY VAL GLU TYR LYS PHE ALA SER SEQRES 22 A 319 TRP ALA ARG VAL TYR ALA GLU TYR GLY TYR GLY ASP GLY SEQRES 23 A 319 THR THR LEU GLY TYR THR ASN LYS GLY SER ASP ALA GLU SEQRES 24 A 319 VAL LYS ALA THR LYS GLY ASP SER ALA ASN ASN PHE GLY SEQRES 25 A 319 ILE GLY ALA ARG TYR TYR TRP HET C8E A 401 6 HET C8E A 402 11 HET C8E A 403 9 HET C8E A 404 12 HET C8E A 405 7 HET C8E A 406 6 HET C8E A 407 16 HET C8E A 408 10 HET MG A 409 1 HET ACT A 410 4 HET ACT A 411 4 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 2 C8E 8(C16 H34 O5) FORMUL 10 MG MG 2+ FORMUL 11 ACT 2(C2 H3 O2 1-) FORMUL 13 HOH *39(H2 O) HELIX 1 AA1 THR A 89 TYR A 95 1 7 SHEET 1 AA118 THR A 30 GLY A 32 0 SHEET 2 AA118 GLY A 9 PHE A 23 -1 N LYS A 22 O THR A 30 SHEET 3 AA118 ASN A 300 TRP A 310 -1 O TYR A 308 N LEU A 17 SHEET 4 AA118 ALA A 281 GLY A 292 -1 N GLY A 288 O ASN A 301 SHEET 5 AA118 ASP A 263 ALA A 278 -1 N TYR A 275 O VAL A 283 SHEET 6 AA118 THR A 245 ALA A 258 -1 N GLN A 256 O GLU A 264 SHEET 7 AA118 VAL A 227 ALA A 242 -1 N TYR A 239 O LEU A 247 SHEET 8 AA118 ALA A 208 VAL A 221 -1 N LEU A 219 O ILE A 228 SHEET 9 AA118 THR A 184 ILE A 205 -1 N TYR A 203 O ILE A 210 SHEET 10 AA118 LEU A 160 VAL A 181 -1 N GLY A 177 O ILE A 188 SHEET 11 AA118 GLU A 147 PHE A 157 -1 N PHE A 157 O LEU A 160 SHEET 12 AA118 PHE A 131 GLY A 138 -1 N LYS A 134 O TYR A 152 SHEET 13 AA118 LEU A 117 GLU A 127 -1 N TYR A 124 O ALA A 135 SHEET 14 AA118 GLY A 80 TRP A 88 -1 N SER A 83 O LYS A 123 SHEET 15 AA118 TYR A 67 THR A 77 -1 N LEU A 73 O PHE A 84 SHEET 16 AA118 LEU A 50 ALA A 59 -1 N ALA A 51 O LYS A 76 SHEET 17 AA118 ARG A 37 ASN A 47 -1 N ALA A 38 O PHE A 58 SHEET 18 AA118 GLY A 9 PHE A 23 -1 N TYR A 14 O GLY A 39 SITE 1 AC1 2 PHE A 23 VAL A 283 SITE 1 AC2 5 VAL A 162 VAL A 199 TYR A 203 TYR A 214 SITE 2 AC2 5 C8E A 406 SITE 1 AC3 2 HIS A 71 VAL A 235 SITE 1 AC4 4 ALA A 135 GLY A 136 ALA A 149 LEU A 151 SITE 1 AC5 1 PHE A 79 SITE 1 AC6 6 ALA A 42 TYR A 44 LEU A 52 GLY A 54 SITE 2 AC6 6 LEU A 73 C8E A 402 SITE 1 AC7 5 ASP A 93 GLU A 127 TRP A 132 LYS A 134 SITE 2 AC7 5 HOH A 513 SITE 1 AC8 4 GLY A 166 SER A 195 TYR A 196 ASN A 216 SITE 1 AC9 2 TYR A 101 ARG A 307 SITE 1 AD1 1 TYR A 99 SITE 1 AD2 6 ASP A 220 VAL A 221 GLU A 222 ASN A 224 SITE 2 AD2 6 ASN A 259 HOH A 502 CRYST1 43.480 128.410 171.680 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022999 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005825 0.00000