HEADER TRANSCRIPTION 26-SEP-17 6EKK TITLE CRYSTAL STRUCTURE OF GEF DOMAIN OF DENND 1A IN COMPLEX WITH RAB GTPASE TITLE 2 RAB35-GDP BOUND STATE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DENN DOMAIN-CONTAINING PROTEIN 1A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CONNECDENN 1,CONNECDENN,PROTEIN FAM31A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CHAIN A- DENND1AA (UNIPROT Q8TEH3) CHAIN B- RAB35 COMPND 7 (UNIPROT - Q15286); COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RAS-RELATED PROTEIN RAB-35; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: GTP-BINDING PROTEIN RAY,RAS-RELATED PROTEIN RAB-1C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DENND1A, FAM31A, KIAA1608; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFB-CT10HF-LIC; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: RAB35, RAB1C, RAY; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_CELL: ESCHERICHIA COLI BL21 DE3; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS DENND1A- DENN DOMAIN-CONTAINING PROTEIN 1A RAB35- RAS-RELATED PROTEIN KEYWDS 2 RAB-35, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR V.SRIKANNATHASAN,A.SZYKOWSKA,C.TALLANT,C.STRAIN-DAMERELL,J.KOPEC, AUTHOR 2 K.KUPINSKA,S.MUKHOPADHYAY,M.GAVIN,D.WANG,R.CHALK,N.A.BURGESS-BROWN, AUTHOR 3 C.H.ARROWSMITH,A.EDWARDS,C.BOUNTRA,F.VON DELFT,K.HUBER REVDAT 2 17-JAN-24 6EKK 1 REMARK REVDAT 1 17-OCT-18 6EKK 0 JRNL AUTH V.SRIKANNATHASAN JRNL TITL CRYSTAL STRUCTURE OF DENND1A-RAB35 COMPLEX WITH GDP BOUND JRNL TITL 2 STATE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 115262 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 5773 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.4710 - 5.6526 0.98 3724 198 0.1837 0.2258 REMARK 3 2 5.6526 - 4.4875 0.98 3761 171 0.1576 0.1839 REMARK 3 3 4.4875 - 3.9205 0.98 3709 209 0.1536 0.1937 REMARK 3 4 3.9205 - 3.5622 0.98 3726 195 0.1597 0.2065 REMARK 3 5 3.5622 - 3.3069 0.98 3687 190 0.1765 0.2132 REMARK 3 6 3.3069 - 3.1120 0.98 3699 185 0.1768 0.1987 REMARK 3 7 3.1120 - 2.9561 0.97 3717 150 0.1842 0.2409 REMARK 3 8 2.9561 - 2.8275 0.97 3697 187 0.1956 0.2398 REMARK 3 9 2.8275 - 2.7186 0.97 3671 193 0.1922 0.2499 REMARK 3 10 2.7186 - 2.6248 0.96 3657 186 0.1896 0.2288 REMARK 3 11 2.6248 - 2.5427 0.96 3587 202 0.1919 0.2184 REMARK 3 12 2.5427 - 2.4701 0.96 3649 205 0.1996 0.2585 REMARK 3 13 2.4701 - 2.4050 0.96 3601 187 0.1945 0.2272 REMARK 3 14 2.4050 - 2.3464 0.96 3619 211 0.1973 0.2416 REMARK 3 15 2.3464 - 2.2930 0.96 3638 174 0.1950 0.2153 REMARK 3 16 2.2930 - 2.2442 0.96 3654 192 0.2087 0.2469 REMARK 3 17 2.2442 - 2.1993 0.95 3592 176 0.2109 0.2893 REMARK 3 18 2.1993 - 2.1578 0.96 3599 202 0.2096 0.2648 REMARK 3 19 2.1578 - 2.1193 0.96 3630 182 0.2172 0.2296 REMARK 3 20 2.1193 - 2.0834 0.96 3669 184 0.2226 0.2435 REMARK 3 21 2.0834 - 2.0498 0.96 3641 189 0.2340 0.2690 REMARK 3 22 2.0498 - 2.0182 0.96 3593 209 0.2433 0.3019 REMARK 3 23 2.0182 - 1.9885 0.96 3590 182 0.2598 0.2734 REMARK 3 24 1.9885 - 1.9605 0.96 3663 221 0.2713 0.3022 REMARK 3 25 1.9605 - 1.9340 0.96 3624 197 0.2790 0.3274 REMARK 3 26 1.9340 - 1.9089 0.96 3611 202 0.2981 0.3411 REMARK 3 27 1.9089 - 1.8851 0.96 3598 223 0.3199 0.3293 REMARK 3 28 1.8851 - 1.8623 0.96 3633 188 0.3318 0.3207 REMARK 3 29 1.8623 - 1.8407 0.96 3595 195 0.3624 0.3955 REMARK 3 30 1.8407 - 1.8200 0.96 3655 188 0.3762 0.3428 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9085 REMARK 3 ANGLE : 1.104 12376 REMARK 3 CHIRALITY : 0.043 1398 REMARK 3 PLANARITY : 0.005 1583 REMARK 3 DIHEDRAL : 14.438 3223 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.7260 9.6475 25.3630 REMARK 3 T TENSOR REMARK 3 T11: 0.2146 T22: 0.1859 REMARK 3 T33: 0.2031 T12: 0.0077 REMARK 3 T13: 0.0341 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.2772 L22: 0.1059 REMARK 3 L33: 0.4261 L12: 0.0677 REMARK 3 L13: 0.2242 L23: 0.0364 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: -0.0057 S13: -0.0010 REMARK 3 S21: 0.0447 S22: -0.0049 S23: 0.0262 REMARK 3 S31: -0.0351 S32: -0.0063 S33: -0.0127 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EKK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1200006754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 115286 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 50.452 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3TW8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25%PEG3350, 0.2M AMS, 0.1M BIS-TRIS PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 22 REMARK 465 ARG A 23 REMARK 465 THR A 24 REMARK 465 GLY A 25 REMARK 465 GLY A 26 REMARK 465 THR A 27 REMARK 465 LEU A 28 REMARK 465 SER A 29 REMARK 465 SER A 61 REMARK 465 LEU A 62 REMARK 465 THR A 63 REMARK 465 VAL A 64 REMARK 465 SER A 65 REMARK 465 GLN A 66 REMARK 465 MET A 391 REMARK 465 GLY A 392 REMARK 465 GLU A 393 REMARK 465 TYR A 394 REMARK 465 GLY B 25 REMARK 465 GLY B 26 REMARK 465 THR B 27 REMARK 465 LEU B 28 REMARK 465 ASP B 60 REMARK 465 SER B 61 REMARK 465 LEU B 62 REMARK 465 THR B 63 REMARK 465 VAL B 64 REMARK 465 SER B 65 REMARK 465 GLN B 66 REMARK 465 VAL B 67 REMARK 465 ARG D 3 REMARK 465 LYS D 178 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 THR A 49 CG2 REMARK 470 ASP A 60 CG OD1 OD2 REMARK 470 SER A 91 OG REMARK 470 ALA A 93 CB REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 ARG A 123 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 VAL A 145 CG1 CG2 REMARK 470 VAL A 147 CG1 CG2 REMARK 470 VAL A 151 CG1 CG2 REMARK 470 ARG A 161 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 255 CD OE1 OE2 REMARK 470 ARG A 258 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 263 CG OD1 OD2 REMARK 470 GLN A 283 CG CD OE1 NE2 REMARK 470 LYS A 299 CG CD CE NZ REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 ILE A 329 CG1 CG2 CD1 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLN A 353 CG CD OE1 NE2 REMARK 470 SER A 377 OG REMARK 470 GLU A 379 CG CD OE1 OE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 ALA B 93 CB REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 THR B 121 OG1 CG2 REMARK 470 ARG B 123 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 LYS B 137 CE NZ REMARK 470 ARG B 161 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 255 CD OE1 OE2 REMARK 470 ASP B 280 CG OD1 OD2 REMARK 470 GLN B 283 CG CD OE1 NE2 REMARK 470 LYS B 298 CG CD CE NZ REMARK 470 LYS B 299 CG CD CE NZ REMARK 470 VAL B 300 CG1 CG2 REMARK 470 THR B 303 OG1 CG2 REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 GLU B 332 CG CD OE1 OE2 REMARK 470 GLU B 333 CG CD OE1 OE2 REMARK 470 GLN B 353 CG CD OE1 NE2 REMARK 470 LEU B 375 CG CD1 CD2 REMARK 470 PHE B 381 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 382 OG REMARK 470 TYR B 394 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG C 3 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 51 CG CD OE1 OE2 REMARK 470 LYS C 56 CG CD CE NZ REMARK 470 GLU C 94 CG CD OE1 OE2 REMARK 470 GLU C 126 CG CD OE1 OE2 REMARK 470 ARG C 127 CD NE CZ NH1 NH2 REMARK 470 GLU C 133 CG CD OE1 OE2 REMARK 470 LYS C 137 CG CD CE NZ REMARK 470 ARG C 170 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 4 CG OD1 OD2 REMARK 470 LYS D 56 CG CD CE NZ REMARK 470 LYS D 58 CD CE NZ REMARK 470 ARG D 71 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 126 CG CD OE1 OE2 REMARK 470 ARG D 127 CD NE CZ NH1 NH2 REMARK 470 GLU D 133 CG CD OE1 OE2 REMARK 470 LYS D 137 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 196 O ASP B 263 1.99 REMARK 500 O HOH B 625 O HOH B 770 2.16 REMARK 500 O HOH B 608 O HOH B 730 2.18 REMARK 500 N GLY A 2 O HOH A 501 2.19 REMARK 500 OE1 GLU B 18 O HOH B 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 243 CA - CB - CG ANGL. DEV. = -15.6 DEGREES REMARK 500 GLY B 378 N - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 105 74.29 -101.78 REMARK 500 HIS A 225 -145.38 -110.29 REMARK 500 ILE A 329 69.63 -111.01 REMARK 500 PRO A 331 172.64 -54.21 REMARK 500 GLU A 333 156.23 66.09 REMARK 500 TRP B 105 76.47 -100.45 REMARK 500 ASN B 129 -53.49 81.48 REMARK 500 ASP B 180 151.39 -49.19 REMARK 500 HIS B 225 -139.95 -109.78 REMARK 500 ASP B 263 106.75 -51.15 REMARK 500 ASP B 264 85.43 37.56 REMARK 500 SER B 377 -69.67 -120.57 REMARK 500 GLU B 379 116.17 63.95 REMARK 500 SER B 382 85.89 69.58 REMARK 500 ASN B 390 11.91 -60.58 REMARK 500 MET B 391 43.27 -97.32 REMARK 500 LYS C 121 31.97 70.80 REMARK 500 ASP C 123 23.07 -146.17 REMARK 500 THR D 40 -60.75 -109.72 REMARK 500 ASP D 123 17.46 -143.38 REMARK 500 LEU D 176 17.12 -152.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 782 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B 783 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B 784 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B 785 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH B 786 DISTANCE = 7.60 ANGSTROMS REMARK 525 HOH B 787 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH C 438 DISTANCE = 7.15 ANGSTROMS REMARK 525 HOH D 458 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH D 459 DISTANCE = 6.69 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP D 203 DBREF 6EKK A 2 394 UNP Q8TEH3 DEN1A_HUMAN 2 394 DBREF 6EKK B 2 394 UNP Q8TEH3 DEN1A_HUMAN 2 394 DBREF 6EKK C 3 178 UNP Q15286 RAB35_HUMAN 3 178 DBREF 6EKK D 3 178 UNP Q15286 RAB35_HUMAN 3 178 SEQRES 1 A 393 GLY SER ARG ILE LYS GLN ASN PRO GLU THR THR PHE GLU SEQRES 2 A 393 VAL TYR VAL GLU VAL ALA TYR PRO ARG THR GLY GLY THR SEQRES 3 A 393 LEU SER ASP PRO GLU VAL GLN ARG GLN PHE PRO GLU ASP SEQRES 4 A 393 TYR SER ASP GLN GLU VAL LEU GLN THR LEU THR LYS PHE SEQRES 5 A 393 CYS PHE PRO PHE TYR VAL ASP SER LEU THR VAL SER GLN SEQRES 6 A 393 VAL GLY GLN ASN PHE THR PHE VAL LEU THR ASP ILE ASP SEQRES 7 A 393 SER LYS GLN ARG PHE GLY PHE CYS ARG LEU SER SER GLY SEQRES 8 A 393 ALA LYS SER CYS PHE CYS ILE LEU SER TYR LEU PRO TRP SEQRES 9 A 393 PHE GLU VAL PHE TYR LYS LEU LEU ASN ILE LEU ALA ASP SEQRES 10 A 393 TYR THR THR LYS ARG GLN GLU ASN GLN TRP ASN GLU LEU SEQRES 11 A 393 LEU GLU THR LEU HIS LYS LEU PRO ILE PRO ASP PRO GLY SEQRES 12 A 393 VAL SER VAL HIS LEU SER VAL HIS SER TYR PHE THR VAL SEQRES 13 A 393 PRO ASP THR ARG GLU LEU PRO SER ILE PRO GLU ASN ARG SEQRES 14 A 393 ASN LEU THR GLU TYR PHE VAL ALA VAL ASP VAL ASN ASN SEQRES 15 A 393 MET LEU HIS LEU TYR ALA SER MET LEU TYR GLU ARG ARG SEQRES 16 A 393 ILE LEU ILE ILE CYS SER LYS LEU SER THR LEU THR ALA SEQRES 17 A 393 CYS ILE HIS GLY SER ALA ALA MET LEU TYR PRO MET TYR SEQRES 18 A 393 TRP GLN HIS VAL TYR ILE PRO VAL LEU PRO PRO HIS LEU SEQRES 19 A 393 LEU ASP TYR CYS CYS ALA PRO MET PRO TYR LEU ILE GLY SEQRES 20 A 393 ILE HIS LEU SER LEU MET GLU LYS VAL ARG ASN MET ALA SEQRES 21 A 393 LEU ASP ASP VAL VAL ILE LEU ASN VAL ASP THR ASN THR SEQRES 22 A 393 LEU GLU THR PRO PHE ASP ASP LEU GLN SER LEU PRO ASN SEQRES 23 A 393 ASP VAL ILE SER SER LEU LYS ASN ARG LEU LYS LYS VAL SEQRES 24 A 393 SER THR THR THR GLY ASP GLY VAL ALA ARG ALA PHE LEU SEQRES 25 A 393 LYS ALA GLN ALA ALA PHE PHE GLY SER TYR ARG ASN ALA SEQRES 26 A 393 LEU LYS ILE GLU PRO GLU GLU PRO ILE THR PHE CYS GLU SEQRES 27 A 393 GLU ALA PHE VAL SER HIS TYR ARG SER GLY ALA MET ARG SEQRES 28 A 393 GLN PHE LEU GLN ASN ALA THR GLN LEU GLN LEU PHE LYS SEQRES 29 A 393 GLN PHE ILE ASP GLY ARG LEU ASP LEU LEU ASN SER GLY SEQRES 30 A 393 GLU GLY PHE SER ASP VAL PHE GLU GLU GLU ILE ASN MET SEQRES 31 A 393 GLY GLU TYR SEQRES 1 B 393 GLY SER ARG ILE LYS GLN ASN PRO GLU THR THR PHE GLU SEQRES 2 B 393 VAL TYR VAL GLU VAL ALA TYR PRO ARG THR GLY GLY THR SEQRES 3 B 393 LEU SER ASP PRO GLU VAL GLN ARG GLN PHE PRO GLU ASP SEQRES 4 B 393 TYR SER ASP GLN GLU VAL LEU GLN THR LEU THR LYS PHE SEQRES 5 B 393 CYS PHE PRO PHE TYR VAL ASP SER LEU THR VAL SER GLN SEQRES 6 B 393 VAL GLY GLN ASN PHE THR PHE VAL LEU THR ASP ILE ASP SEQRES 7 B 393 SER LYS GLN ARG PHE GLY PHE CYS ARG LEU SER SER GLY SEQRES 8 B 393 ALA LYS SER CYS PHE CYS ILE LEU SER TYR LEU PRO TRP SEQRES 9 B 393 PHE GLU VAL PHE TYR LYS LEU LEU ASN ILE LEU ALA ASP SEQRES 10 B 393 TYR THR THR LYS ARG GLN GLU ASN GLN TRP ASN GLU LEU SEQRES 11 B 393 LEU GLU THR LEU HIS LYS LEU PRO ILE PRO ASP PRO GLY SEQRES 12 B 393 VAL SER VAL HIS LEU SER VAL HIS SER TYR PHE THR VAL SEQRES 13 B 393 PRO ASP THR ARG GLU LEU PRO SER ILE PRO GLU ASN ARG SEQRES 14 B 393 ASN LEU THR GLU TYR PHE VAL ALA VAL ASP VAL ASN ASN SEQRES 15 B 393 MET LEU HIS LEU TYR ALA SER MET LEU TYR GLU ARG ARG SEQRES 16 B 393 ILE LEU ILE ILE CYS SER LYS LEU SER THR LEU THR ALA SEQRES 17 B 393 CYS ILE HIS GLY SER ALA ALA MET LEU TYR PRO MET TYR SEQRES 18 B 393 TRP GLN HIS VAL TYR ILE PRO VAL LEU PRO PRO HIS LEU SEQRES 19 B 393 LEU ASP TYR CYS CYS ALA PRO MET PRO TYR LEU ILE GLY SEQRES 20 B 393 ILE HIS LEU SER LEU MET GLU LYS VAL ARG ASN MET ALA SEQRES 21 B 393 LEU ASP ASP VAL VAL ILE LEU ASN VAL ASP THR ASN THR SEQRES 22 B 393 LEU GLU THR PRO PHE ASP ASP LEU GLN SER LEU PRO ASN SEQRES 23 B 393 ASP VAL ILE SER SER LEU LYS ASN ARG LEU LYS LYS VAL SEQRES 24 B 393 SER THR THR THR GLY ASP GLY VAL ALA ARG ALA PHE LEU SEQRES 25 B 393 LYS ALA GLN ALA ALA PHE PHE GLY SER TYR ARG ASN ALA SEQRES 26 B 393 LEU LYS ILE GLU PRO GLU GLU PRO ILE THR PHE CYS GLU SEQRES 27 B 393 GLU ALA PHE VAL SER HIS TYR ARG SER GLY ALA MET ARG SEQRES 28 B 393 GLN PHE LEU GLN ASN ALA THR GLN LEU GLN LEU PHE LYS SEQRES 29 B 393 GLN PHE ILE ASP GLY ARG LEU ASP LEU LEU ASN SER GLY SEQRES 30 B 393 GLU GLY PHE SER ASP VAL PHE GLU GLU GLU ILE ASN MET SEQRES 31 B 393 GLY GLU TYR SEQRES 1 C 176 ARG ASP TYR ASP HIS LEU PHE LYS LEU LEU ILE ILE GLY SEQRES 2 C 176 ASP SER GLY VAL GLY LYS SER SER LEU LEU LEU ARG PHE SEQRES 3 C 176 ALA ASP ASN THR PHE SER GLY SER TYR ILE THR THR ILE SEQRES 4 C 176 GLY VAL ASP PHE LYS ILE ARG THR VAL GLU ILE ASN GLY SEQRES 5 C 176 GLU LYS VAL LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 C 176 GLU ARG PHE ARG THR ILE THR SER THR TYR TYR ARG GLY SEQRES 7 C 176 THR HIS GLY VAL ILE VAL VAL TYR ASP VAL THR SER ALA SEQRES 8 C 176 GLU SER PHE VAL ASN VAL LYS ARG TRP LEU HIS GLU ILE SEQRES 9 C 176 ASN GLN ASN CYS ASP ASP VAL CYS ARG ILE LEU VAL GLY SEQRES 10 C 176 ASN LYS ASN ASP ASP PRO GLU ARG LYS VAL VAL GLU THR SEQRES 11 C 176 GLU ASP ALA TYR LYS PHE ALA GLY GLN MET GLY ILE GLN SEQRES 12 C 176 LEU PHE GLU THR SER ALA LYS GLU ASN VAL ASN VAL GLU SEQRES 13 C 176 GLU MET PHE ASN CYS ILE THR GLU LEU VAL LEU ARG ALA SEQRES 14 C 176 LYS LYS ASP ASN LEU ALA LYS SEQRES 1 D 176 ARG ASP TYR ASP HIS LEU PHE LYS LEU LEU ILE ILE GLY SEQRES 2 D 176 ASP SER GLY VAL GLY LYS SER SER LEU LEU LEU ARG PHE SEQRES 3 D 176 ALA ASP ASN THR PHE SER GLY SER TYR ILE THR THR ILE SEQRES 4 D 176 GLY VAL ASP PHE LYS ILE ARG THR VAL GLU ILE ASN GLY SEQRES 5 D 176 GLU LYS VAL LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 D 176 GLU ARG PHE ARG THR ILE THR SER THR TYR TYR ARG GLY SEQRES 7 D 176 THR HIS GLY VAL ILE VAL VAL TYR ASP VAL THR SER ALA SEQRES 8 D 176 GLU SER PHE VAL ASN VAL LYS ARG TRP LEU HIS GLU ILE SEQRES 9 D 176 ASN GLN ASN CYS ASP ASP VAL CYS ARG ILE LEU VAL GLY SEQRES 10 D 176 ASN LYS ASN ASP ASP PRO GLU ARG LYS VAL VAL GLU THR SEQRES 11 D 176 GLU ASP ALA TYR LYS PHE ALA GLY GLN MET GLY ILE GLN SEQRES 12 D 176 LEU PHE GLU THR SER ALA LYS GLU ASN VAL ASN VAL GLU SEQRES 13 D 176 GLU MET PHE ASN CYS ILE THR GLU LEU VAL LEU ARG ALA SEQRES 14 D 176 LYS LYS ASP ASN LEU ALA LYS HET SO4 A 401 5 HET SO4 A 402 5 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET SO4 B 401 5 HET SO4 B 402 5 HET SO4 B 403 5 HET EDO B 404 4 HET EDO B 405 4 HET EDO B 406 4 HET EDO B 407 4 HET SO4 C 201 5 HET SO4 C 202 5 HET EDO C 203 4 HET GDP C 204 28 HET SO4 D 201 5 HET SO4 D 202 5 HET GDP D 203 28 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 SO4 9(O4 S 2-) FORMUL 7 EDO 8(C2 H6 O2) FORMUL 20 GDP 2(C10 H15 N5 O11 P2) FORMUL 24 HOH *860(H2 O) HELIX 1 AA1 ASP A 43 CYS A 54 1 12 HELIX 2 AA2 TRP A 105 LYS A 122 1 18 HELIX 3 AA3 GLN A 124 LEU A 138 1 15 HELIX 4 AA4 ASN A 169 VAL A 179 1 11 HELIX 5 AA5 ASP A 180 TYR A 193 1 14 HELIX 6 AA6 LYS A 203 MET A 217 1 15 HELIX 7 AA7 PRO A 232 ALA A 241 5 10 HELIX 8 AA8 LEU A 253 MET A 260 1 8 HELIX 9 AA9 ASP A 280 LEU A 285 1 6 HELIX 10 AB1 PRO A 286 LYS A 299 1 14 HELIX 11 AB2 ASP A 306 GLY A 321 1 16 HELIX 12 AB3 SER A 322 ASN A 325 5 4 HELIX 13 AB4 CYS A 338 SER A 344 1 7 HELIX 14 AB5 SER A 348 THR A 359 1 12 HELIX 15 AB6 LEU A 361 GLY A 378 1 18 HELIX 16 AB7 ASP A 383 ASN A 390 1 8 HELIX 17 AB8 ASP B 43 CYS B 54 1 12 HELIX 18 AB9 TRP B 105 LYS B 122 1 18 HELIX 19 AC1 ASN B 126 LEU B 138 1 13 HELIX 20 AC2 ASN B 169 VAL B 179 1 11 HELIX 21 AC3 ASP B 180 LEU B 192 1 13 HELIX 22 AC4 LYS B 203 MET B 217 1 15 HELIX 23 AC5 PRO B 232 ALA B 241 5 10 HELIX 24 AC6 LEU B 253 ASN B 259 1 7 HELIX 25 AC7 ASP B 280 LEU B 285 1 6 HELIX 26 AC8 PRO B 286 LYS B 299 1 14 HELIX 27 AC9 VAL B 300 THR B 304 5 5 HELIX 28 AD1 ASP B 306 GLY B 321 1 16 HELIX 29 AD2 SER B 322 ASN B 325 5 4 HELIX 30 AD3 CYS B 338 SER B 344 1 7 HELIX 31 AD4 SER B 348 THR B 359 1 12 HELIX 32 AD5 LEU B 361 ASN B 376 1 16 HELIX 33 AD6 ASP B 383 ASN B 390 1 8 HELIX 34 AD7 GLY C 20 ALA C 29 1 10 HELIX 35 AD8 TYR C 37 GLY C 42 1 6 HELIX 36 AD9 GLY C 66 PHE C 70 5 5 HELIX 37 AE1 THR C 74 ARG C 79 5 6 HELIX 38 AE2 SER C 92 CYS C 110 1 19 HELIX 39 AE3 ASP C 124 LYS C 128 5 5 HELIX 40 AE4 GLU C 131 GLY C 143 1 13 HELIX 41 AE5 ASN C 156 ALA C 177 1 22 HELIX 42 AE6 GLY D 20 ARG D 27 1 8 HELIX 43 AE7 GLY D 66 PHE D 70 5 5 HELIX 44 AE8 THR D 74 ARG D 79 5 6 HELIX 45 AE9 SER D 92 CYS D 110 1 19 HELIX 46 AF1 GLU D 131 GLY D 143 1 13 HELIX 47 AF2 ASN D 156 ASN D 175 1 20 SHEET 1 AA1 5 GLU A 32 PHE A 37 0 SHEET 2 AA1 5 VAL A 15 ALA A 20 -1 N GLU A 18 O GLN A 34 SHEET 3 AA1 5 SER A 95 SER A 101 -1 O CYS A 96 N VAL A 19 SHEET 4 AA1 5 GLN A 82 LEU A 89 -1 N PHE A 84 O SER A 101 SHEET 5 AA1 5 ASN A 70 THR A 76 -1 N PHE A 73 O GLY A 85 SHEET 1 AA2 2 SER A 146 HIS A 148 0 SHEET 2 AA2 2 TYR A 154 THR A 156 -1 O PHE A 155 N VAL A 147 SHEET 1 AA3 5 VAL A 226 ILE A 228 0 SHEET 2 AA3 5 TYR A 245 HIS A 250 1 O GLY A 248 N ILE A 228 SHEET 3 AA3 5 ARG A 196 CYS A 201 1 N ILE A 197 O TYR A 245 SHEET 4 AA3 5 VAL A 266 ASN A 269 1 O VAL A 266 N LEU A 198 SHEET 5 AA3 5 THR A 274 GLU A 276 -1 O THR A 274 N ASN A 269 SHEET 1 AA4 2 LEU A 327 LYS A 328 0 SHEET 2 AA4 2 THR A 336 PHE A 337 -1 O THR A 336 N LYS A 328 SHEET 1 AA5 5 GLU B 32 PHE B 37 0 SHEET 2 AA5 5 VAL B 15 ALA B 20 -1 N GLU B 18 O GLN B 34 SHEET 3 AA5 5 SER B 95 SER B 101 -1 O CYS B 98 N VAL B 17 SHEET 4 AA5 5 GLN B 82 LEU B 89 -1 N PHE B 84 O SER B 101 SHEET 5 AA5 5 ASN B 70 THR B 76 -1 N LEU B 75 O ARG B 83 SHEET 1 AA6 2 SER B 146 SER B 150 0 SHEET 2 AA6 2 SER B 153 THR B 156 -1 O PHE B 155 N VAL B 147 SHEET 1 AA7 5 VAL B 226 ILE B 228 0 SHEET 2 AA7 5 TYR B 245 HIS B 250 1 O LEU B 246 N ILE B 228 SHEET 3 AA7 5 ARG B 196 CYS B 201 1 N ILE B 199 O ILE B 247 SHEET 4 AA7 5 VAL B 266 ASN B 269 1 O VAL B 266 N LEU B 198 SHEET 5 AA7 5 THR B 274 GLU B 276 -1 O GLU B 276 N ILE B 267 SHEET 1 AA8 2 LEU B 327 LYS B 328 0 SHEET 2 AA8 2 THR B 336 PHE B 337 -1 O THR B 336 N LYS B 328 SHEET 1 AA9 6 VAL C 43 ILE C 52 0 SHEET 2 AA9 6 GLU C 55 THR C 64 -1 O VAL C 57 N VAL C 50 SHEET 3 AA9 6 HIS C 7 ILE C 14 1 N HIS C 7 O LYS C 58 SHEET 4 AA9 6 GLY C 83 ASP C 89 1 O VAL C 87 N ILE C 14 SHEET 5 AA9 6 CYS C 114 ASN C 120 1 O VAL C 118 N VAL C 86 SHEET 6 AA9 6 LEU C 146 GLU C 148 1 O PHE C 147 N LEU C 117 SHEET 1 AB1 6 VAL D 43 ILE D 52 0 SHEET 2 AB1 6 GLU D 55 THR D 64 -1 O GLU D 55 N ILE D 52 SHEET 3 AB1 6 HIS D 7 GLY D 15 1 N LEU D 11 O GLN D 60 SHEET 4 AB1 6 GLY D 83 ASP D 89 1 O VAL D 87 N ILE D 14 SHEET 5 AB1 6 CYS D 114 ASN D 120 1 O VAL D 118 N TYR D 88 SHEET 6 AB1 6 LEU D 146 GLU D 148 1 O PHE D 147 N LEU D 117 CISPEP 1 PHE A 37 PRO A 38 0 -2.23 CISPEP 2 ILE A 166 PRO A 167 0 5.88 CISPEP 3 TYR A 219 PRO A 220 0 12.24 CISPEP 4 GLU A 333 PRO A 334 0 -5.87 CISPEP 5 PHE B 37 PRO B 38 0 -3.40 CISPEP 6 ILE B 166 PRO B 167 0 10.02 CISPEP 7 TYR B 219 PRO B 220 0 12.04 CISPEP 8 GLU B 379 GLY B 380 0 0.50 CISPEP 9 GLY B 380 PHE B 381 0 1.46 SITE 1 AC1 3 LYS A 6 GLN A 7 ASN A 8 SITE 1 AC2 3 ASP A 237 PHE C 45 GLN C 60 SITE 1 AC3 5 ARG A 4 GLN A 82 ALA A 215 TYR A 222 SITE 2 AC3 5 TRP A 223 SITE 1 AC4 7 TYR A 110 ARG A 170 ASN A 171 GLU A 174 SITE 2 AC4 7 SER A 205 THR A 208 HOH A 564 SITE 1 AC5 4 ASN A 171 HIS A 212 HOH A 585 HOH A 638 SITE 1 AC6 3 ASN B 70 ASN B 114 HOH B 525 SITE 1 AC7 4 LYS B 6 GLN B 7 ASN B 8 LYS B 81 SITE 1 AC8 6 GLU B 45 VAL B 46 THR B 49 ARG B 83 SITE 2 AC8 6 THR D 39 THR D 40 SITE 1 AC9 5 GLN B 82 ALA B 215 TYR B 222 TRP B 223 SITE 2 AC9 5 TYR B 227 SITE 1 AD1 2 THR A 272 ARG B 123 SITE 1 AD2 7 ASN B 70 TYR B 110 ARG B 170 ASN B 171 SITE 2 AD2 7 SER B 205 THR B 208 HOH B 571 SITE 1 AD3 5 PHE B 337 GLU B 339 LYS B 365 HOH B 526 SITE 2 AD3 5 HOH B 572 SITE 1 AD4 3 LYS C 100 HIS C 104 HOH C 343 SITE 1 AD5 5 ASN C 31 THR C 32 PHE C 33 HOH C 374 SITE 2 AD5 5 HOH C 381 SITE 1 AD6 3 HOH A 634 PHE C 33 SER C 36 SITE 1 AD7 15 GLY C 18 VAL C 19 GLY C 20 LYS C 21 SITE 2 AD7 15 SER C 22 SER C 23 ASN C 120 LYS C 121 SITE 3 AD7 15 ASP C 123 SER C 150 ALA C 151 LYS C 152 SITE 4 AD7 15 HOH C 306 HOH C 312 HOH C 376 SITE 1 AD8 5 CYS D 114 ARG D 115 GLY D 143 ILE D 144 SITE 2 AD8 5 HOH D 322 SITE 1 AD9 5 ILE B 78 SER D 36 THR D 39 GDP D 203 SITE 2 AD9 5 HOH D 371 SITE 1 AE1 19 GLY D 18 VAL D 19 GLY D 20 LYS D 21 SITE 2 AE1 19 SER D 22 SER D 23 ASN D 120 LYS D 121 SITE 3 AE1 19 ASP D 123 SER D 150 ALA D 151 LYS D 152 SITE 4 AE1 19 SO4 D 202 HOH D 312 HOH D 321 HOH D 333 SITE 5 AE1 19 HOH D 384 HOH D 402 HOH D 410 CRYST1 55.700 67.990 101.710 80.50 76.80 67.06 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017953 -0.007599 -0.003579 0.00000 SCALE2 0.000000 0.015971 -0.001359 0.00000 SCALE3 0.000000 0.000000 0.010135 0.00000