HEADER RIBOSOME 02-OCT-17 6EMG TITLE CRYSTAL STRUCTURE OF RRP1 FROM CHAETOMIUM THERMOPHILUM IN SPACE GROUP TITLE 2 P6322 COMPND MOL_ID: 1; COMPND 2 MOLECULE: G0S4M2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM (STRAIN DSM 1495 / CBS SOURCE 3 144.50 / IMI 039719); SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 STRAIN: DSM 1495 / CBS 144.50 / IMI 039719; SOURCE 6 GENE: CTHT_0031510; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15B KEYWDS RIBOSOME BIOGENESIS, RIBOSOME, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR Y.L.AHMED,I.SINNING REVDAT 4 08-MAY-24 6EMG 1 REMARK REVDAT 3 16-OCT-19 6EMG 1 REMARK REVDAT 2 31-JAN-18 6EMG 1 REMARK REVDAT 1 27-DEC-17 6EMG 0 JRNL AUTH L.KATER,M.THOMS,C.BARRIO-GARCIA,J.CHENG,S.ISMAIL,Y.L.AHMED, JRNL AUTH 2 G.BANGE,D.KRESSLER,O.BERNINGHAUSEN,I.SINNING,E.HURT, JRNL AUTH 3 R.BECKMANN JRNL TITL VISUALIZING THE ASSEMBLY PATHWAY OF NUCLEOLAR PRE-60S JRNL TITL 2 RIBOSOMES. JRNL REF CELL V. 171 1599 2017 JRNL REFN ISSN 1097-4172 JRNL PMID 29245012 JRNL DOI 10.1016/J.CELL.2017.11.039 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 80940 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 3988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2334 - 6.7963 1.00 3013 161 0.2037 0.2430 REMARK 3 2 6.7963 - 5.3966 1.00 2842 146 0.2050 0.2084 REMARK 3 3 5.3966 - 4.7150 1.00 2823 148 0.1648 0.1775 REMARK 3 4 4.7150 - 4.2842 1.00 2791 140 0.1540 0.1551 REMARK 3 5 4.2842 - 3.9773 1.00 2796 132 0.1549 0.1742 REMARK 3 6 3.9773 - 3.7429 1.00 2773 139 0.1601 0.1830 REMARK 3 7 3.7429 - 3.5555 1.00 2750 152 0.1759 0.1843 REMARK 3 8 3.5555 - 3.4008 1.00 2743 139 0.1842 0.2056 REMARK 3 9 3.4008 - 3.2699 1.00 2758 151 0.1946 0.2106 REMARK 3 10 3.2699 - 3.1570 1.00 2753 122 0.1883 0.2425 REMARK 3 11 3.1570 - 3.0583 1.00 2705 161 0.1948 0.2270 REMARK 3 12 3.0583 - 2.9709 1.00 2734 159 0.2016 0.2007 REMARK 3 13 2.9709 - 2.8927 1.00 2736 137 0.2047 0.2244 REMARK 3 14 2.8927 - 2.8222 1.00 2728 139 0.1969 0.2306 REMARK 3 15 2.8222 - 2.7580 1.00 2729 134 0.1902 0.1998 REMARK 3 16 2.7580 - 2.6993 1.00 2716 149 0.1988 0.2275 REMARK 3 17 2.6993 - 2.6453 1.00 2708 150 0.1948 0.1918 REMARK 3 18 2.6453 - 2.5954 1.00 2736 141 0.1870 0.2228 REMARK 3 19 2.5954 - 2.5491 1.00 2725 122 0.2002 0.2362 REMARK 3 20 2.5491 - 2.5059 1.00 2725 136 0.2057 0.2273 REMARK 3 21 2.5059 - 2.4654 1.00 2689 157 0.2056 0.2375 REMARK 3 22 2.4654 - 2.4275 1.00 2731 135 0.2139 0.2751 REMARK 3 23 2.4275 - 2.3918 1.00 2702 149 0.2250 0.2126 REMARK 3 24 2.3918 - 2.3581 1.00 2685 143 0.2241 0.2168 REMARK 3 25 2.3581 - 2.3263 1.00 2745 133 0.2310 0.2731 REMARK 3 26 2.3263 - 2.2960 1.00 2663 161 0.2447 0.2818 REMARK 3 27 2.2960 - 2.2673 1.00 2713 126 0.2537 0.2447 REMARK 3 28 2.2673 - 2.2400 1.00 2740 126 0.2581 0.2718 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3838 REMARK 3 ANGLE : 0.643 5177 REMARK 3 CHIRALITY : 0.039 578 REMARK 3 PLANARITY : 0.004 640 REMARK 3 DIHEDRAL : 8.374 3213 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 62.8368 71.1197 18.2993 REMARK 3 T TENSOR REMARK 3 T11: 0.3706 T22: 0.3808 REMARK 3 T33: 0.3230 T12: 0.1441 REMARK 3 T13: -0.0395 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 0.3923 L22: 1.6624 REMARK 3 L33: 1.0692 L12: 0.0115 REMARK 3 L13: 0.1499 L23: -0.6460 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: 0.1135 S13: 0.0108 REMARK 3 S21: -0.2278 S22: -0.0310 S23: 0.1787 REMARK 3 S31: 0.3252 S32: 0.0829 S33: 0.0010 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EMG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200005630. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99188 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80956 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 49.222 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M K-H2PO4 0.8M NA-H2PO4, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.39250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 62.39250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.39250 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 62.39250 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 62.39250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 62.39250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 SER A 132 REMARK 465 LEU A 133 REMARK 465 GLY A 134 REMARK 465 LYS A 135 REMARK 465 ARG A 136 REMARK 465 THR A 137 REMARK 465 HIS A 138 REMARK 465 ASP A 139 REMARK 465 GLY A 140 REMARK 465 GLN A 141 REMARK 465 GLU A 142 REMARK 465 LYS A 143 REMARK 465 ALA A 144 REMARK 465 VAL A 145 REMARK 465 LYS A 146 REMARK 465 THR A 147 REMARK 465 GLN A 177 REMARK 465 SER A 178 REMARK 465 SER A 179 REMARK 465 GLU A 180 REMARK 465 LYS A 181 REMARK 465 GLY A 182 REMARK 465 ARG A 259 REMARK 465 PRO A 260 REMARK 465 ASN A 261 REMARK 465 SER A 262 REMARK 465 SER A 263 REMARK 465 GLN A 264 REMARK 465 ASP A 265 REMARK 465 HIS A 266 REMARK 465 ASP A 267 REMARK 465 THR A 268 REMARK 465 LYS A 269 REMARK 465 ASP A 270 REMARK 465 MET A 271 REMARK 465 GLY A 272 REMARK 465 ASP A 273 REMARK 465 SER A 274 REMARK 465 ASP A 275 REMARK 465 SER A 276 REMARK 465 TRP A 277 REMARK 465 GLU A 278 REMARK 465 GLY A 279 REMARK 465 PHE A 280 REMARK 465 ASP A 281 REMARK 465 ASP A 282 REMARK 465 GLY A 283 REMARK 465 SER A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 HIS A 288 REMARK 465 HIS A 289 REMARK 465 HIS A 290 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 GLU B 5 REMARK 465 LYS B 6 REMARK 465 ALA B 15 REMARK 465 SER B 16 REMARK 465 SER B 17 REMARK 465 ASP B 18 REMARK 465 ARG B 19 REMARK 465 ARG B 36 REMARK 465 GLN B 37 REMARK 465 VAL B 38 REMARK 465 ALA B 39 REMARK 465 GLY B 131 REMARK 465 SER B 132 REMARK 465 LEU B 133 REMARK 465 GLY B 134 REMARK 465 LYS B 135 REMARK 465 ARG B 136 REMARK 465 THR B 137 REMARK 465 HIS B 138 REMARK 465 ASP B 139 REMARK 465 GLY B 140 REMARK 465 GLN B 141 REMARK 465 GLU B 142 REMARK 465 LYS B 143 REMARK 465 ALA B 144 REMARK 465 VAL B 145 REMARK 465 LYS B 146 REMARK 465 THR B 147 REMARK 465 GLY B 148 REMARK 465 PRO B 260 REMARK 465 ASN B 261 REMARK 465 SER B 262 REMARK 465 SER B 263 REMARK 465 GLN B 264 REMARK 465 ASP B 265 REMARK 465 HIS B 266 REMARK 465 ASP B 267 REMARK 465 THR B 268 REMARK 465 LYS B 269 REMARK 465 ASP B 270 REMARK 465 MET B 271 REMARK 465 GLY B 272 REMARK 465 ASP B 273 REMARK 465 SER B 274 REMARK 465 ASP B 275 REMARK 465 SER B 276 REMARK 465 TRP B 277 REMARK 465 GLU B 278 REMARK 465 GLY B 279 REMARK 465 PHE B 280 REMARK 465 ASP B 281 REMARK 465 ASP B 282 REMARK 465 GLY B 283 REMARK 465 SER B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 465 HIS B 288 REMARK 465 HIS B 289 REMARK 465 HIS B 290 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL B 21 NH1 ARG B 22 1.73 REMARK 500 O HOH A 401 O HOH A 430 1.91 REMARK 500 OE1 GLU A 171 O HOH A 401 2.15 REMARK 500 O HOH A 403 O HOH A 417 2.16 REMARK 500 OE1 GLU A 215 O HOH A 402 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 130 33.52 -151.26 REMARK 500 TRP A 165 -84.65 -114.87 REMARK 500 ARG B 22 -52.99 -137.11 REMARK 500 TRP B 165 -84.68 -118.08 REMARK 500 GLU B 213 61.59 -104.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6EM1 RELATED DB: PDB REMARK 900 RELATED ID: 6EM3 RELATED DB: PDB REMARK 900 RELATED ID: 6EM4 RELATED DB: PDB REMARK 900 RELATED ID: 6EM5 RELATED DB: PDB REMARK 900 RELATED ID: 6ELZ RELATED DB: PDB REMARK 900 RELATED ID: 6EMF RELATED DB: PDB REMARK 900 RRP1 IN SPACE GROUP C2 DBREF 6EMG A 1 282 UNP G0S4M2 G0S4M2_CHATD 1 282 DBREF 6EMG B 1 282 UNP G0S4M2 G0S4M2_CHATD 1 282 SEQADV 6EMG GLY A 283 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG SER A 284 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS A 285 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS A 286 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS A 287 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS A 288 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS A 289 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS A 290 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG GLY B 283 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG SER B 284 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS B 285 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS B 286 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS B 287 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS B 288 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS B 289 UNP G0S4M2 EXPRESSION TAG SEQADV 6EMG HIS B 290 UNP G0S4M2 EXPRESSION TAG SEQRES 1 A 290 MET THR SER GLN GLU LYS SER MET PRO PHE ILE LYS HIS SEQRES 2 A 290 LEU ALA SER SER ASP ARG LYS VAL ARG THR ALA ALA LEU SEQRES 3 A 290 ASN SER LEU HIS ALA PHE LEU SER ALA ARG GLN VAL ALA SEQRES 4 A 290 SER ALA LEU THR THR LEU ASP VAL LEU LYS LEU TRP LYS SEQRES 5 A 290 GLY LEU PHE TYR ALA LEU TRP MET CYS ASP ARG ALA ILE SEQRES 6 A 290 PRO GLN GLN ASN LEU CYS ASN GLU LEU ALA ASP LEU ILE SEQRES 7 A 290 TRP GLN LEU PRO ARG GLU SER VAL ALA THR TRP LEU ARG SEQRES 8 A 290 GLY PHE TRP ALA THR MET ALA ARG GLU TRP THR GLY ILE SEQRES 9 A 290 ASP VAL LEU ARG MET GLU LYS PHE LEU LEU LEU VAL ARG SEQRES 10 A 290 ARG VAL LEU GLY ALA SER PHE LYS TRP MET LYS LYS ASP SEQRES 11 A 290 GLY SER LEU GLY LYS ARG THR HIS ASP GLY GLN GLU LYS SEQRES 12 A 290 ALA VAL LYS THR GLY ALA TRP ASP GLN SER LYS VAL ASP SEQRES 13 A 290 GLU VAL LEU GLY LEU LEU ALA GLU TRP PRO PHE SER LEU SEQRES 14 A 290 ALA GLU GLU VAL ARG ILE THR GLN SER SER GLU LYS GLY SEQRES 15 A 290 GLY GLU ILE VAL GLN LYS ILE PRO VAL GLY MET ARG LEU SEQRES 16 A 290 HIS VAL LEU ASP ILE TRP VAL ASP GLU VAL GLU ARG VAL SEQRES 17 A 290 GLY LEU LEU ASN GLU ASP GLU GLU GLU ALA ARG MET ILE SEQRES 18 A 290 VAL GLN ARG ILE SER ASP MET VAL ASP ALA LEU GLU GLN SEQRES 19 A 290 THR THR LYS SER PRO ALA VAL ARG THR ARG SER LYS ASP SEQRES 20 A 290 SER LEU GLY ASP ASP ARG LEU PRO ALA ASN ARG ARG PRO SEQRES 21 A 290 ASN SER SER GLN ASP HIS ASP THR LYS ASP MET GLY ASP SEQRES 22 A 290 SER ASP SER TRP GLU GLY PHE ASP ASP GLY SER HIS HIS SEQRES 23 A 290 HIS HIS HIS HIS SEQRES 1 B 290 MET THR SER GLN GLU LYS SER MET PRO PHE ILE LYS HIS SEQRES 2 B 290 LEU ALA SER SER ASP ARG LYS VAL ARG THR ALA ALA LEU SEQRES 3 B 290 ASN SER LEU HIS ALA PHE LEU SER ALA ARG GLN VAL ALA SEQRES 4 B 290 SER ALA LEU THR THR LEU ASP VAL LEU LYS LEU TRP LYS SEQRES 5 B 290 GLY LEU PHE TYR ALA LEU TRP MET CYS ASP ARG ALA ILE SEQRES 6 B 290 PRO GLN GLN ASN LEU CYS ASN GLU LEU ALA ASP LEU ILE SEQRES 7 B 290 TRP GLN LEU PRO ARG GLU SER VAL ALA THR TRP LEU ARG SEQRES 8 B 290 GLY PHE TRP ALA THR MET ALA ARG GLU TRP THR GLY ILE SEQRES 9 B 290 ASP VAL LEU ARG MET GLU LYS PHE LEU LEU LEU VAL ARG SEQRES 10 B 290 ARG VAL LEU GLY ALA SER PHE LYS TRP MET LYS LYS ASP SEQRES 11 B 290 GLY SER LEU GLY LYS ARG THR HIS ASP GLY GLN GLU LYS SEQRES 12 B 290 ALA VAL LYS THR GLY ALA TRP ASP GLN SER LYS VAL ASP SEQRES 13 B 290 GLU VAL LEU GLY LEU LEU ALA GLU TRP PRO PHE SER LEU SEQRES 14 B 290 ALA GLU GLU VAL ARG ILE THR GLN SER SER GLU LYS GLY SEQRES 15 B 290 GLY GLU ILE VAL GLN LYS ILE PRO VAL GLY MET ARG LEU SEQRES 16 B 290 HIS VAL LEU ASP ILE TRP VAL ASP GLU VAL GLU ARG VAL SEQRES 17 B 290 GLY LEU LEU ASN GLU ASP GLU GLU GLU ALA ARG MET ILE SEQRES 18 B 290 VAL GLN ARG ILE SER ASP MET VAL ASP ALA LEU GLU GLN SEQRES 19 B 290 THR THR LYS SER PRO ALA VAL ARG THR ARG SER LYS ASP SEQRES 20 B 290 SER LEU GLY ASP ASP ARG LEU PRO ALA ASN ARG ARG PRO SEQRES 21 B 290 ASN SER SER GLN ASP HIS ASP THR LYS ASP MET GLY ASP SEQRES 22 B 290 SER ASP SER TRP GLU GLY PHE ASP ASP GLY SER HIS HIS SEQRES 23 B 290 HIS HIS HIS HIS HET PO4 A 301 5 HET PO4 A 302 5 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET EPE A 310 15 HET PO4 B 301 5 HET PO4 B 302 5 HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN EPE HEPES FORMUL 3 PO4 4(O4 P 3-) FORMUL 5 EDO 7(C2 H6 O2) FORMUL 12 EPE C8 H18 N2 O4 S FORMUL 15 HOH *189(H2 O) HELIX 1 AA1 PHE A 10 LEU A 14 5 5 HELIX 2 AA2 ASP A 18 ALA A 35 1 18 HELIX 3 AA3 ALA A 35 ALA A 41 1 7 HELIX 4 AA4 THR A 43 CYS A 61 1 19 HELIX 5 AA5 ARG A 63 ASP A 76 1 14 HELIX 6 AA6 LEU A 77 LEU A 81 5 5 HELIX 7 AA7 PRO A 82 GLU A 84 5 3 HELIX 8 AA8 SER A 85 TRP A 101 1 17 HELIX 9 AA9 THR A 102 ILE A 104 5 3 HELIX 10 AB1 ASP A 105 MET A 127 1 23 HELIX 11 AB2 ASP A 151 TRP A 165 1 15 HELIX 12 AB3 PRO A 190 ASP A 199 1 10 HELIX 13 AB4 ILE A 200 VAL A 208 1 9 HELIX 14 AB5 GLU A 215 THR A 236 1 22 HELIX 15 AB6 SER A 238 GLY A 250 1 13 HELIX 16 AB7 LEU A 254 ARG A 258 5 5 HELIX 17 AB8 MET B 8 LEU B 14 5 7 HELIX 18 AB9 ARG B 22 ALA B 35 1 14 HELIX 19 AC1 THR B 43 CYS B 61 1 19 HELIX 20 AC2 ARG B 63 LEU B 77 1 15 HELIX 21 AC3 ILE B 78 LEU B 81 5 4 HELIX 22 AC4 PRO B 82 GLU B 84 5 3 HELIX 23 AC5 SER B 85 TRP B 101 1 17 HELIX 24 AC6 THR B 102 ILE B 104 5 3 HELIX 25 AC7 ASP B 105 MET B 127 1 23 HELIX 26 AC8 ASP B 151 TRP B 165 1 15 HELIX 27 AC9 PRO B 190 VAL B 208 1 19 HELIX 28 AD1 GLU B 215 THR B 236 1 22 HELIX 29 AD2 SER B 238 GLY B 250 1 13 SHEET 1 AA1 2 GLU A 172 ILE A 175 0 SHEET 2 AA1 2 ILE A 185 LYS A 188 -1 O ILE A 185 N ILE A 175 SHEET 1 AA2 2 GLU B 172 ARG B 174 0 SHEET 2 AA2 2 VAL B 186 LYS B 188 -1 O GLN B 187 N VAL B 173 SITE 1 AC1 4 LYS A 52 TYR A 56 ARG A 99 GLU A 100 SITE 1 AC2 4 GLN A 152 SER A 153 ASP A 156 ARG B 63 SITE 1 AC3 7 ALA A 64 GLN A 67 GLN A 68 GLU A 110 SITE 2 AC3 7 LEU A 114 ASP A 252 HOH A 428 SITE 1 AC4 3 LYS A 12 HIS A 13 SER A 16 SITE 1 AC5 1 HIS A 13 SITE 1 AC6 6 GLU A 110 LEU A 113 LEU A 114 ARG A 117 SITE 2 AC6 6 HIS A 196 HOH A 471 SITE 1 AC7 3 ARG A 118 ARG A 207 HOH A 454 SITE 1 AC8 3 ARG A 36 ARG A 83 ASP A 130 SITE 1 AC9 7 VAL A 191 SER A 238 PRO A 239 ALA A 240 SITE 2 AC9 7 HOH A 408 HOH A 477 HOH A 526 SITE 1 AD1 4 LYS B 52 TYR B 56 ARG B 99 GLU B 100 SITE 1 AD2 5 GLN A 223 ASP A 227 GLN B 68 ASN B 72 SITE 2 AD2 5 ARG B 118 CRYST1 214.259 214.259 124.785 90.00 90.00 120.00 P 63 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004667 0.002695 0.000000 0.00000 SCALE2 0.000000 0.005389 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008014 0.00000