HEADER FLAVOPROTEIN 09-OCT-17 6EOA TITLE CRYSTAL STRUCTURE OF HAL3 FROM CRYPTOCOCCUS NEOFORMANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOPANTOTHENOYLCYSTEINE DECARBOXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HAL3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOCOCCUS NEOFORMANS; SOURCE 3 ORGANISM_TAXID: 5207; SOURCE 4 GENE: CNAG_07348; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FMN, PHOSPHOPANTOTHENOYLCYSTEINE DECARBOXYLASE (PPCDC) ENZYME, KEYWDS 2 FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.REVERTER,C.ZHANG,C.MOLERO,J.ARINO REVDAT 4 17-JAN-24 6EOA 1 REMARK REVDAT 3 17-APR-19 6EOA 1 JRNL REVDAT 2 26-DEC-18 6EOA 1 JRNL REVDAT 1 31-OCT-18 6EOA 0 JRNL AUTH C.ZHANG,R.GARCIA-RODAS,C.MOLERO,H.C.DE OLIVEIRA,L.TABERNERO, JRNL AUTH 2 D.REVERTER,O.ZARAGOZA,J.ARINO JRNL TITL CHARACTERIZATION OF THE ATYPICAL PPZ/HAL3 PHOSPHATASE SYSTEM JRNL TITL 2 FROM THE PATHOGENIC FUNGUS CRYPTOCOCCUS NEOFORMANS. JRNL REF MOL.MICROBIOL. V. 111 898 2019 JRNL REFN ESSN 1365-2958 JRNL PMID 30536975 JRNL DOI 10.1111/MMI.14181 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 12512 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.1865 - 3.4545 0.97 3174 159 0.1831 0.1904 REMARK 3 2 3.4545 - 2.7419 0.99 3124 164 0.2671 0.3396 REMARK 3 3 2.7419 - 2.3953 0.97 3014 162 0.2673 0.3456 REMARK 3 4 2.3953 - 2.1763 0.83 2575 140 0.2826 0.3254 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1529 REMARK 3 ANGLE : 0.883 2089 REMARK 3 CHIRALITY : 0.033 243 REMARK 3 PLANARITY : 0.003 262 REMARK 3 DIHEDRAL : 15.625 540 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -40.9012 6.0033 14.3356 REMARK 3 T TENSOR REMARK 3 T11: 0.6400 T22: 0.5682 REMARK 3 T33: 0.6271 T12: 0.0116 REMARK 3 T13: 0.0553 T23: -0.1067 REMARK 3 L TENSOR REMARK 3 L11: 2.3547 L22: 3.6386 REMARK 3 L33: 1.8604 L12: -0.0450 REMARK 3 L13: 0.7223 L23: -0.7146 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: 0.2031 S13: -0.4635 REMARK 3 S21: -0.2928 S22: -0.0134 S23: -0.0286 REMARK 3 S31: 0.2214 S32: 0.0189 S33: 0.0081 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EOA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200006961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12855 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 56.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1E20 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M SUCCINIC ACID, PH 7.0, REMARK 280 EVAPORATION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 44.09700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.45941 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 55.25800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 44.09700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.45941 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 55.25800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 44.09700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.45941 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 55.25800 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 44.09700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.45941 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 55.25800 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 44.09700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.45941 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 55.25800 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 44.09700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.45941 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 55.25800 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.91883 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 110.51600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 50.91883 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 110.51600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 50.91883 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 110.51600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 50.91883 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 110.51600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 50.91883 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 110.51600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 50.91883 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 110.51600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -44.09700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 76.37824 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -88.19400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 918 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 PRO A 3 REMARK 465 ALA A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 HIS A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 PRO A 10 REMARK 465 VAL A 11 REMARK 465 ARG A 12 REMARK 465 LYS A 13 REMARK 465 LYS A 14 REMARK 465 PRO A 15 REMARK 465 SER A 16 REMARK 465 ARG A 17 REMARK 465 PRO A 18 REMARK 465 PHE A 19 REMARK 465 VAL A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 ARG A 25 REMARK 465 PRO A 26 REMARK 465 ALA A 27 REMARK 465 ASP A 28 REMARK 465 ASP A 29 REMARK 465 VAL A 30 REMARK 465 ASP A 31 REMARK 465 ASP A 114 REMARK 465 TRP A 115 REMARK 465 LYS A 116 REMARK 465 GLN A 117 REMARK 465 VAL A 118 REMARK 465 ALA A 206 REMARK 465 GLY A 207 REMARK 465 ARG A 208 REMARK 465 LEU A 209 REMARK 465 ALA A 210 REMARK 465 CYS A 211 REMARK 465 GLY A 212 REMARK 465 ASP A 213 REMARK 465 ASP A 214 REMARK 465 ARG A 239 REMARK 465 ARG A 240 REMARK 465 ALA A 241 REMARK 465 VAL A 242 REMARK 465 VAL A 243 REMARK 465 HIS A 244 REMARK 465 PRO A 245 REMARK 465 GLY A 246 REMARK 465 HIS A 247 REMARK 465 PRO A 248 REMARK 465 LEU A 249 REMARK 465 GLN A 250 REMARK 465 GLU A 251 REMARK 465 SER A 252 REMARK 465 SER A 253 REMARK 465 ASP A 254 REMARK 465 PRO A 255 REMARK 465 PRO A 256 REMARK 465 LEU A 257 REMARK 465 PRO A 258 REMARK 465 PRO A 259 REMARK 465 PRO A 260 REMARK 465 THR A 261 REMARK 465 GLU A 262 REMARK 465 THR A 263 REMARK 465 PRO A 264 REMARK 465 PRO A 265 REMARK 465 THR A 266 REMARK 465 PRO A 267 REMARK 465 GLY A 268 REMARK 465 ARG A 269 REMARK 465 PRO A 270 REMARK 465 SER A 271 REMARK 465 LYS A 272 REMARK 465 SER A 273 REMARK 465 SER A 274 REMARK 465 SER A 275 REMARK 465 ALA A 276 REMARK 465 VAL A 277 REMARK 465 GLY A 278 REMARK 465 SER A 279 REMARK 465 SER A 280 REMARK 465 SER A 281 REMARK 465 VAL A 282 REMARK 465 SER A 283 REMARK 465 THR A 284 REMARK 465 GLN A 285 REMARK 465 ASP A 286 REMARK 465 ARG A 287 REMARK 465 ALA A 288 REMARK 465 PRO A 289 REMARK 465 ALA A 290 REMARK 465 LYS A 291 REMARK 465 ALA A 292 REMARK 465 PRO A 293 REMARK 465 SER A 294 REMARK 465 ASP A 295 REMARK 465 ASP A 296 REMARK 465 VAL A 297 REMARK 465 LEU A 298 REMARK 465 THR A 299 REMARK 465 GLY A 300 REMARK 465 ILE A 301 REMARK 465 ALA A 302 REMARK 465 ASP A 303 REMARK 465 TRP A 304 REMARK 465 ARG A 305 REMARK 465 SER A 306 REMARK 465 MET A 307 REMARK 465 THR A 308 REMARK 465 ASN A 309 REMARK 465 GLU A 310 REMARK 465 LEU A 311 REMARK 465 GLY A 312 REMARK 465 GLY A 313 REMARK 465 ASP A 314 REMARK 465 GLY A 315 REMARK 465 THR A 316 REMARK 465 ALA A 317 REMARK 465 TRP A 318 REMARK 465 ARG A 319 REMARK 465 ARG A 320 REMARK 465 LYS A 321 REMARK 465 TRP A 322 REMARK 465 TRP A 323 REMARK 465 LEU A 324 REMARK 465 GLY A 325 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 63 O HOH A 901 1.87 REMARK 500 NH2 ARG A 87 O HOH A 902 2.15 REMARK 500 O SER A 60 O HOH A 901 2.16 REMARK 500 OE2 GLU A 80 O HOH A 902 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 917 O HOH A 917 5555 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 98 N - CA - C ANGL. DEV. = -16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 152 55.00 -140.45 REMARK 500 ASP A 153 32.22 -98.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 801 DBREF 6EOA A 1 325 UNP J9VGI2 J9VGI2_CRYNH 1 325 SEQRES 1 A 325 MET GLN PRO ALA GLN THR HIS ALA ALA PRO VAL ARG LYS SEQRES 2 A 325 LYS PRO SER ARG PRO PHE VAL SER SER HIS HIS ARG PRO SEQRES 3 A 325 ALA ASP ASP VAL ASP ASP GLY ILE PHE ARG VAL VAL LEU SEQRES 4 A 325 ILE THR SER GLY SER VAL ALA SER ILE LYS ALA PRO ASP SEQRES 5 A 325 ILE VAL GLY ALA LEU VAL LYS SER PRO ASN ILE ASP VAL SEQRES 6 A 325 GLN VAL VAL ALA THR LYS ALA SER THR TYR PHE TYR SER SEQRES 7 A 325 GLN GLU ASP VAL ASP ASN SER VAL ARG SER ALA LEU ASN SEQRES 8 A 325 LEU PRO ASP GLY GLN THR GLY GLU HIS PHE GLY VAL ARG SEQRES 9 A 325 VAL TRP THR ASP GLU ASP GLU TRP SER ASP TRP LYS GLN SEQRES 10 A 325 VAL GLY GLU PRO ILE LEU HIS ILE GLU LEU ARG ARG TRP SEQRES 11 A 325 ALA ASP LEU VAL VAL ILE ALA PRO CYS SER ALA ASP LEU SEQRES 12 A 325 LEU ALA LYS ILE ALA GLY GLY ILE CYS ASP SER LEU ALA SEQRES 13 A 325 THR SER LEU LEU ARG ALA LEU GLY PRO SER THR PRO VAL SEQRES 14 A 325 ILE VAL CYS PRO ALA MET ASN THR TYR MET TYR GLN HIS SEQRES 15 A 325 ARG LEU THR THR ARG HIS LEU ALA VAL VAL GLN GLU ASP SEQRES 16 A 325 LEU GLY TYR LEU VAL SER GLY PRO GLN GLY ALA GLY ARG SEQRES 17 A 325 LEU ALA CYS GLY ASP ASP GLY PRO GLY LYS MET THR ASP SEQRES 18 A 325 TRP ARG ASP ILE VAL SER LEU ILE GLU GLY PHE ALA THR SEQRES 19 A 325 MET HIS GLN ASP ARG ARG ALA VAL VAL HIS PRO GLY HIS SEQRES 20 A 325 PRO LEU GLN GLU SER SER ASP PRO PRO LEU PRO PRO PRO SEQRES 21 A 325 THR GLU THR PRO PRO THR PRO GLY ARG PRO SER LYS SER SEQRES 22 A 325 SER SER ALA VAL GLY SER SER SER VAL SER THR GLN ASP SEQRES 23 A 325 ARG ALA PRO ALA LYS ALA PRO SER ASP ASP VAL LEU THR SEQRES 24 A 325 GLY ILE ALA ASP TRP ARG SER MET THR ASN GLU LEU GLY SEQRES 25 A 325 GLY ASP GLY THR ALA TRP ARG ARG LYS TRP TRP LEU GLY HET FMN A 801 31 HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 HOH *20(H2 O) HELIX 1 AA1 SER A 44 ILE A 48 5 5 HELIX 2 AA2 LYS A 49 SER A 60 1 12 HELIX 3 AA3 LYS A 71 PHE A 76 5 6 HELIX 4 AA4 SER A 78 LEU A 90 1 13 HELIX 5 AA5 GLU A 99 VAL A 103 5 5 HELIX 6 AA6 THR A 107 TRP A 112 1 6 HELIX 7 AA7 ILE A 122 ALA A 131 1 10 HELIX 8 AA8 SER A 140 GLY A 150 1 11 HELIX 9 AA9 SER A 154 LEU A 163 1 10 HELIX 10 AB1 ASN A 176 GLN A 181 1 6 HELIX 11 AB2 HIS A 182 ASP A 195 1 14 HELIX 12 AB3 ASP A 221 ASP A 238 1 18 SHEET 1 AA1 6 VAL A 105 TRP A 106 0 SHEET 2 AA1 6 ILE A 63 ALA A 69 1 N VAL A 67 O TRP A 106 SHEET 3 AA1 6 PHE A 35 THR A 41 1 N LEU A 39 O VAL A 68 SHEET 4 AA1 6 LEU A 133 CYS A 139 1 O VAL A 135 N ILE A 40 SHEET 5 AA1 6 VAL A 169 PRO A 173 1 O ILE A 170 N ILE A 136 SHEET 6 AA1 6 LEU A 199 VAL A 200 1 O LEU A 199 N VAL A 171 CISPEP 1 THR A 97 GLY A 98 0 8.76 CISPEP 2 PHE A 101 GLY A 102 0 -10.19 CISPEP 3 ALA A 137 PRO A 138 0 1.68 SITE 1 AC1 23 SER A 42 GLY A 43 SER A 44 VAL A 45 SITE 2 AC1 23 THR A 70 ALA A 72 GLU A 111 TRP A 112 SITE 3 AC1 23 ILE A 122 HIS A 124 SER A 140 ALA A 141 SITE 4 AC1 23 ASP A 142 LEU A 143 CYS A 152 ASP A 153 SITE 5 AC1 23 SER A 158 ALA A 174 MET A 175 HOH A 905 SITE 6 AC1 23 HOH A 911 HOH A 914 HOH A 915 CRYST1 88.194 88.194 165.774 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011339 0.006546 0.000000 0.00000 SCALE2 0.000000 0.013093 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006032 0.00000