HEADER TRANSCRIPTION 10-OCT-17 6EP3 TITLE LAR CONTROLS THE EXPRESSION OF THE LISTERIA MONOCYTOGENES AGR SYSTEM TITLE 2 AND MEDIATES VIRULENCE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: LMO0651 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES SEROVAR 1/2A (STRAIN SOURCE 3 ATCC BAA-679 / EGD-E); SOURCE 4 ORGANISM_TAXID: 169963; SOURCE 5 STRAIN: ATCC BAA-679 / EGD-E; SOURCE 6 GENE: LMO0651; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, DNA BINDING PROTEIN, ACTIVATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.PINHEIRO,J.LISBOA,F.CARVALHO,A.CARREAUX,N.SANTOS,J.CABRAL,S.SOUSA, AUTHOR 2 D.CABANES REVDAT 3 08-MAY-24 6EP3 1 REMARK REVDAT 2 24-OCT-18 6EP3 1 JRNL REVDAT 1 25-JUL-18 6EP3 0 JRNL AUTH J.PINHEIRO,J.LISBOA,R.POMBINHO,F.CARVALHO,A.CARREAUX, JRNL AUTH 2 C.BRITO,A.PONTINEN,H.KORKEALA,N.M.S.DOS SANTOS, JRNL AUTH 3 J.H.MORAIS-CABRAL,S.SOUSA,D.CABANES JRNL TITL MOUR CONTROLS THE EXPRESSION OF THE LISTERIA MONOCYTOGENES JRNL TITL 2 AGR SYSTEM AND MEDIATES VIRULENCE. JRNL REF NUCLEIC ACIDS RES. V. 46 9338 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 30011022 JRNL DOI 10.1093/NAR/GKY624 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 45954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 2164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2992 - 5.4233 0.99 3017 141 0.1856 0.2081 REMARK 3 2 5.4233 - 4.3059 0.99 2948 142 0.1730 0.2049 REMARK 3 3 4.3059 - 3.7619 0.99 2924 156 0.1894 0.2365 REMARK 3 4 3.7619 - 3.4181 1.00 2916 151 0.2043 0.2312 REMARK 3 5 3.4181 - 3.1732 0.99 2974 120 0.2317 0.2540 REMARK 3 6 3.1732 - 2.9862 1.00 2901 155 0.2540 0.2818 REMARK 3 7 2.9862 - 2.8367 1.00 2917 159 0.2397 0.2648 REMARK 3 8 2.8367 - 2.7132 0.99 2902 160 0.2609 0.2440 REMARK 3 9 2.7132 - 2.6088 1.00 2946 140 0.2728 0.2741 REMARK 3 10 2.6088 - 2.5188 1.00 2946 110 0.3049 0.3668 REMARK 3 11 2.5188 - 2.4400 1.00 2889 132 0.3235 0.3618 REMARK 3 12 2.4400 - 2.3703 1.00 2941 138 0.3218 0.3555 REMARK 3 13 2.3703 - 2.3079 0.99 2896 154 0.3325 0.3786 REMARK 3 14 2.3079 - 2.2516 0.99 2860 155 0.3591 0.3683 REMARK 3 15 2.2516 - 2.2004 0.96 2813 151 0.3845 0.3638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3700 REMARK 3 ANGLE : 0.562 4971 REMARK 3 CHIRALITY : 0.041 537 REMARK 3 PLANARITY : 0.004 622 REMARK 3 DIHEDRAL : 8.089 2216 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1883 -53.4430 6.7306 REMARK 3 T TENSOR REMARK 3 T11: 0.9282 T22: 0.4419 REMARK 3 T33: 0.7368 T12: -0.1263 REMARK 3 T13: 0.0069 T23: 0.0228 REMARK 3 L TENSOR REMARK 3 L11: 0.6527 L22: 0.2114 REMARK 3 L33: 0.3623 L12: -0.1488 REMARK 3 L13: 0.1086 L23: 0.3064 REMARK 3 S TENSOR REMARK 3 S11: -0.0742 S12: -0.2515 S13: -0.0320 REMARK 3 S21: -0.0873 S22: 0.2400 S23: 0.2109 REMARK 3 S31: 0.3475 S32: -0.1347 S33: 0.0240 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8115 -25.2857 -3.4774 REMARK 3 T TENSOR REMARK 3 T11: 0.4907 T22: 0.3348 REMARK 3 T33: 0.4147 T12: 0.0276 REMARK 3 T13: 0.0205 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.4509 L22: 0.5609 REMARK 3 L33: 2.1494 L12: -0.0539 REMARK 3 L13: -0.0146 L23: 0.2121 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.2208 S13: -0.0195 REMARK 3 S21: -0.0708 S22: 0.0819 S23: 0.0373 REMARK 3 S31: -0.0355 S32: 0.0123 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2131 -53.9323 17.5317 REMARK 3 T TENSOR REMARK 3 T11: 0.9595 T22: 0.4913 REMARK 3 T33: 0.8361 T12: 0.1201 REMARK 3 T13: 0.0170 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.3037 L22: 0.4626 REMARK 3 L33: 0.2171 L12: -0.1186 REMARK 3 L13: 0.1423 L23: -0.2962 REMARK 3 S TENSOR REMARK 3 S11: 0.3172 S12: -0.1930 S13: -0.2668 REMARK 3 S21: -0.0465 S22: -0.2451 S23: -0.2741 REMARK 3 S31: 0.3248 S32: 0.3532 S33: -0.0046 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 44 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0911 -51.0567 10.4048 REMARK 3 T TENSOR REMARK 3 T11: 0.9828 T22: 0.4294 REMARK 3 T33: 0.7524 T12: -0.0425 REMARK 3 T13: -0.0647 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0826 L22: 0.0505 REMARK 3 L33: 0.0428 L12: 0.0704 REMARK 3 L13: 0.0552 L23: 0.0630 REMARK 3 S TENSOR REMARK 3 S11: -0.1826 S12: 0.1513 S13: 0.0856 REMARK 3 S21: -0.3601 S22: 0.6559 S23: 0.3848 REMARK 3 S31: 0.3735 S32: 0.1683 S33: 0.0028 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1500 -44.1357 6.2943 REMARK 3 T TENSOR REMARK 3 T11: 0.8797 T22: 0.5727 REMARK 3 T33: 0.6668 T12: 0.0434 REMARK 3 T13: 0.0771 T23: 0.0409 REMARK 3 L TENSOR REMARK 3 L11: -0.0429 L22: 0.0204 REMARK 3 L33: 0.0850 L12: 0.0024 REMARK 3 L13: 0.0204 L23: 0.0369 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: -0.0396 S13: 0.3334 REMARK 3 S21: -0.4900 S22: 0.1338 S23: -0.3145 REMARK 3 S31: 0.3782 S32: 0.1047 S33: 0.0108 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6678 -24.7008 25.0370 REMARK 3 T TENSOR REMARK 3 T11: 0.5463 T22: 0.4722 REMARK 3 T33: 0.4504 T12: 0.0688 REMARK 3 T13: 0.0132 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.0449 L22: 0.6143 REMARK 3 L33: 0.5396 L12: 0.1883 REMARK 3 L13: 0.1159 L23: 0.1483 REMARK 3 S TENSOR REMARK 3 S11: -0.0473 S12: -0.1323 S13: 0.0701 REMARK 3 S21: -0.0432 S22: 0.0108 S23: 0.0169 REMARK 3 S31: -0.0460 S32: -0.1446 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 126 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3306 -29.3737 27.0562 REMARK 3 T TENSOR REMARK 3 T11: 0.6616 T22: 0.4553 REMARK 3 T33: 0.4369 T12: 0.0193 REMARK 3 T13: 0.0076 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.0014 L22: -0.0038 REMARK 3 L33: 0.0576 L12: -0.0081 REMARK 3 L13: 0.0704 L23: -0.0551 REMARK 3 S TENSOR REMARK 3 S11: -0.3153 S12: -0.0246 S13: -0.0415 REMARK 3 S21: 0.4211 S22: 0.2482 S23: 0.1846 REMARK 3 S31: -0.0031 S32: -0.0587 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8272 -33.2190 20.4193 REMARK 3 T TENSOR REMARK 3 T11: 0.5648 T22: 0.3748 REMARK 3 T33: 0.4931 T12: -0.0195 REMARK 3 T13: -0.0153 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.2276 L22: 0.4055 REMARK 3 L33: 0.5539 L12: 0.3008 REMARK 3 L13: -0.0414 L23: -0.1904 REMARK 3 S TENSOR REMARK 3 S11: 0.1037 S12: -0.4665 S13: -0.3354 REMARK 3 S21: -0.1310 S22: -0.0094 S23: 0.0278 REMARK 3 S31: 0.5057 S32: -0.3287 S33: 0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4491 -17.5379 31.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.6065 T22: 0.4130 REMARK 3 T33: 0.4500 T12: 0.0126 REMARK 3 T13: 0.0337 T23: -0.1107 REMARK 3 L TENSOR REMARK 3 L11: 0.2101 L22: -0.0399 REMARK 3 L33: 0.1995 L12: -0.0098 REMARK 3 L13: -0.1061 L23: -0.0899 REMARK 3 S TENSOR REMARK 3 S11: -0.1584 S12: -0.7671 S13: 0.6551 REMARK 3 S21: 0.4189 S22: 0.0709 S23: -0.2507 REMARK 3 S31: -0.5536 S32: 0.1587 S33: 0.0118 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 195 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7322 -19.3041 21.8959 REMARK 3 T TENSOR REMARK 3 T11: 0.5765 T22: 0.4937 REMARK 3 T33: 0.5736 T12: -0.0324 REMARK 3 T13: 0.0775 T23: -0.0610 REMARK 3 L TENSOR REMARK 3 L11: -0.0137 L22: 0.0010 REMARK 3 L33: -0.0138 L12: 0.0054 REMARK 3 L13: -0.0042 L23: 0.0886 REMARK 3 S TENSOR REMARK 3 S11: -0.4380 S12: -0.1512 S13: 0.2930 REMARK 3 S21: 0.0850 S22: 0.4156 S23: -0.2851 REMARK 3 S31: -0.1515 S32: 0.1186 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EP3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200007004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980065, 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46113 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 43.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.11590 REMARK 200 R SYM (I) : 0.12850 REMARK 200 FOR THE DATA SET : 8.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M LITHIUM SULFATE, 100 MM SODIUM REMARK 280 HEPES PH 7.5, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.56500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.28250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.84750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 221 REMARK 465 HIS B 222 REMARK 465 HIS B 223 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 177 O HOH B 401 2.10 REMARK 500 O HOH B 409 O HOH B 443 2.12 REMARK 500 O HOH A 401 O HOH A 436 2.13 REMARK 500 O HOH A 429 O HOH A 434 2.13 REMARK 500 O1 SO4 B 306 O HOH B 402 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 4 67.21 66.79 REMARK 500 SER A 43 -169.48 -74.80 REMARK 500 ASP A 106 76.65 -68.99 REMARK 500 LYS B 4 69.79 -150.79 REMARK 500 SER B 66 -44.30 -137.97 REMARK 500 HIS B 219 27.93 -141.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 308 DBREF 6EP3 A 1 215 UNP Q8Y982 Q8Y982_LISMO 1 215 DBREF 6EP3 B 1 215 UNP Q8Y982 Q8Y982_LISMO 1 215 SEQADV 6EP3 LEU A 216 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 GLU A 217 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS A 218 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS A 219 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS A 220 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS A 221 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS A 222 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS A 223 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 LEU B 216 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 GLU B 217 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS B 218 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS B 219 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS B 220 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS B 221 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS B 222 UNP Q8Y982 EXPRESSION TAG SEQADV 6EP3 HIS B 223 UNP Q8Y982 EXPRESSION TAG SEQRES 1 A 223 MET ALA ASN LYS PHE LYS THR LEU ASP LYS MET VAL TYR SEQRES 2 A 223 ASN LEU LEU LEU GLU LYS ILE LYS ASN GLY GLU LEU VAL SEQRES 3 A 223 PRO ASN GLU HIS LEU ALA GLU GLU LYS LEU ALA ARG GLU SEQRES 4 A 223 PHE GLY VAL SER ARG SER PRO LEU ARG LYS ALA ILE ALA SEQRES 5 A 223 THR LEU THR ALA GLN GLY ILE VAL SER TYR HIS GLU ASN SEQRES 6 A 223 SER GLY ALA VAL LEU ASN ASP CYS ILE VAL ASP ALA ASP SEQRES 7 A 223 ARG TYR VAL GLN LEU MET GLU THR ILE GLU ILE PHE VAL SEQRES 8 A 223 ASP ALA ALA ILE ALA LYS ALA ALA HIS PHE GLY TYR GLU SEQRES 9 A 223 MET ASP LEU GLU LYS LEU TYR ALA ARG MET GLN GLU MET SEQRES 10 A 223 GLU ARG PHE SER TYR LEU THR ASP LEU GLU ASN TYR PHE SEQRES 11 A 223 ASP ALA HIS HIS ARG PHE ILE LEU CYS LEU ILE SER PHE SEQRES 12 A 223 ALA GLU ASN PRO TYR GLN VAL ARG ILE VAL LYS GLN ILE SEQRES 13 A 223 PHE PHE GLN MET VAL HIS PHE SER ASP GLY ILE ASN MET SEQRES 14 A 223 PHE LYS SER VAL GLU ILE ARG GLU TRP THR ASN LYS LYS SEQRES 15 A 223 SER ASN GLN ILE TYR GLU LEU LEU ALA GLU GLY LYS ILE SEQRES 16 A 223 GLU LEU ALA ARG LYS THR ILE LYS SER MET PHE ALA GLU SEQRES 17 A 223 LEU THR ILE GLN ALA TYR ARG LEU GLU HIS HIS HIS HIS SEQRES 18 A 223 HIS HIS SEQRES 1 B 223 MET ALA ASN LYS PHE LYS THR LEU ASP LYS MET VAL TYR SEQRES 2 B 223 ASN LEU LEU LEU GLU LYS ILE LYS ASN GLY GLU LEU VAL SEQRES 3 B 223 PRO ASN GLU HIS LEU ALA GLU GLU LYS LEU ALA ARG GLU SEQRES 4 B 223 PHE GLY VAL SER ARG SER PRO LEU ARG LYS ALA ILE ALA SEQRES 5 B 223 THR LEU THR ALA GLN GLY ILE VAL SER TYR HIS GLU ASN SEQRES 6 B 223 SER GLY ALA VAL LEU ASN ASP CYS ILE VAL ASP ALA ASP SEQRES 7 B 223 ARG TYR VAL GLN LEU MET GLU THR ILE GLU ILE PHE VAL SEQRES 8 B 223 ASP ALA ALA ILE ALA LYS ALA ALA HIS PHE GLY TYR GLU SEQRES 9 B 223 MET ASP LEU GLU LYS LEU TYR ALA ARG MET GLN GLU MET SEQRES 10 B 223 GLU ARG PHE SER TYR LEU THR ASP LEU GLU ASN TYR PHE SEQRES 11 B 223 ASP ALA HIS HIS ARG PHE ILE LEU CYS LEU ILE SER PHE SEQRES 12 B 223 ALA GLU ASN PRO TYR GLN VAL ARG ILE VAL LYS GLN ILE SEQRES 13 B 223 PHE PHE GLN MET VAL HIS PHE SER ASP GLY ILE ASN MET SEQRES 14 B 223 PHE LYS SER VAL GLU ILE ARG GLU TRP THR ASN LYS LYS SEQRES 15 B 223 SER ASN GLN ILE TYR GLU LEU LEU ALA GLU GLY LYS ILE SEQRES 16 B 223 GLU LEU ALA ARG LYS THR ILE LYS SER MET PHE ALA GLU SEQRES 17 B 223 LEU THR ILE GLN ALA TYR ARG LEU GLU HIS HIS HIS HIS SEQRES 18 B 223 HIS HIS HET EDO A 301 4 HET EDO A 302 4 HET EDO A 303 4 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HET EPE A 309 15 HET EDO B 301 4 HET EDO B 302 4 HET EDO B 303 4 HET SO4 B 304 5 HET SO4 B 305 5 HET SO4 B 306 5 HET SO4 B 307 5 HET SO4 B 308 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN EPE HEPES FORMUL 3 EDO 6(C2 H6 O2) FORMUL 6 SO4 10(O4 S 2-) FORMUL 11 EPE C8 H18 N2 O4 S FORMUL 20 HOH *85(H2 O) HELIX 1 AA1 THR A 7 ASN A 22 1 16 HELIX 2 AA2 ALA A 32 GLY A 41 1 10 HELIX 3 AA3 SER A 43 GLN A 57 1 15 HELIX 4 AA4 ASP A 76 GLY A 102 1 27 HELIX 5 AA5 ASP A 106 THR A 124 1 19 HELIX 6 AA6 ASP A 125 PHE A 143 1 19 HELIX 7 AA7 ASN A 146 SER A 164 1 19 HELIX 8 AA8 ASP A 165 LYS A 171 5 7 HELIX 9 AA9 SER A 172 GLY A 193 1 22 HELIX 10 AB1 LYS A 194 LEU A 216 1 23 HELIX 11 AB2 THR B 7 ASN B 22 1 16 HELIX 12 AB3 ALA B 32 GLY B 41 1 10 HELIX 13 AB4 SER B 43 GLN B 57 1 15 HELIX 14 AB5 ASP B 76 GLY B 102 1 27 HELIX 15 AB6 ASP B 106 THR B 124 1 19 HELIX 16 AB7 ASP B 125 PHE B 143 1 19 HELIX 17 AB8 ASN B 146 SER B 164 1 19 HELIX 18 AB9 ASP B 165 LYS B 171 5 7 HELIX 19 AC1 SER B 172 GLY B 193 1 22 HELIX 20 AC2 LYS B 194 HIS B 220 1 27 SHEET 1 AA1 2 VAL A 60 SER A 61 0 SHEET 2 AA1 2 VAL A 69 LEU A 70 -1 O VAL A 69 N SER A 61 SHEET 1 AA2 2 VAL B 60 HIS B 63 0 SHEET 2 AA2 2 GLY B 67 LEU B 70 -1 O VAL B 69 N SER B 61 SITE 1 AC1 7 TYR A 80 MET A 84 PHE A 130 HIS A 133 SITE 2 AC1 7 HIS A 134 MET A 160 HOH A 411 SITE 1 AC2 2 ARG A 135 LYS A 154 SITE 1 AC3 5 PHE A 90 ALA A 93 ALA A 94 ALA A 144 SITE 2 AC3 5 GLN A 149 SITE 1 AC4 3 ARG A 79 HOH A 403 HOH A 406 SITE 1 AC5 3 LYS A 109 ARG A 113 TYR B 122 SITE 1 AC6 1 ARG A 199 SITE 1 AC7 3 SER A 45 ARG A 48 ARG B 48 SITE 1 AC8 2 LYS A 194 LYS B 194 SITE 1 AC9 3 SER A 172 VAL A 173 GLU A 174 SITE 1 AD1 6 TYR B 80 PHE B 130 HIS B 133 HIS B 134 SITE 2 AD1 6 MET B 160 LEU B 209 SITE 1 AD2 3 ARG B 135 LYS B 154 HOH B 428 SITE 1 AD3 3 SER B 172 VAL B 173 GLU B 174 SITE 1 AD4 3 TYR A 122 LYS B 109 ARG B 113 SITE 1 AD5 1 ARG B 199 SITE 1 AD6 2 ARG B 79 HOH B 402 SITE 1 AD7 5 ALA B 99 HIS B 100 LYS B 181 LYS B 182 SITE 2 AD7 5 GLN B 185 SITE 1 AD8 2 ARG A 119 ARG B 119 CRYST1 122.445 122.445 61.130 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008167 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016359 0.00000