HEADER HYDROLASE 12-OCT-17 6EQE TITLE HIGH RESOLUTION CRYSTAL STRUCTURE OF A POLYETHYLENE TEREPHTHALATE TITLE 2 DEGRADING HYDROLASE FROM IDEONELLA SAKAIENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(ETHYLENE TEREPHTHALATE) HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PETASE; COMPND 5 EC: 3.1.1.101; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: IDEONELLA SAKAIENSIS (STRAIN 201-F6); SOURCE 3 ORGANISM_TAXID: 1547922; SOURCE 4 GENE: ISF6_4831; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41 KEYWDS PETASE, PET DEGRADATION, A/B HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.P.AUSTIN,M.D.ALLEN,C.W.JOHNSON,G.T.BECKHAM,J.E.MCGEEHAN REVDAT 5 06-NOV-24 6EQE 1 REMARK REVDAT 4 17-JAN-24 6EQE 1 LINK REVDAT 3 16-MAY-18 6EQE 1 JRNL REVDAT 2 02-MAY-18 6EQE 1 JRNL REVDAT 1 25-APR-18 6EQE 0 JRNL AUTH H.P.AUSTIN,M.D.ALLEN,B.S.DONOHOE,N.A.RORRER,F.L.KEARNS, JRNL AUTH 2 R.L.SILVEIRA,B.C.POLLARD,G.DOMINICK,R.DUMAN,K.EL OMARI, JRNL AUTH 3 V.MYKHAYLYK,A.WAGNER,W.E.MICHENER,A.AMORE,M.S.SKAF, JRNL AUTH 4 M.F.CROWLEY,A.W.THORNE,C.W.JOHNSON,H.L.WOODCOCK, JRNL AUTH 5 J.E.MCGEEHAN,G.T.BECKHAM JRNL TITL CHARACTERIZATION AND ENGINEERING OF A PLASTIC-DEGRADING JRNL TITL 2 AROMATIC POLYESTERASE. JRNL REF PROC. NATL. ACAD. SCI. V. 115 E4350 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29666242 JRNL DOI 10.1073/PNAS.1718804115 REMARK 2 REMARK 2 RESOLUTION. 0.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 154294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.101 REMARK 3 R VALUE (WORKING SET) : 0.100 REMARK 3 FREE R VALUE : 0.110 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.220 REMARK 3 FREE R VALUE TEST SET COUNT : 8053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.5254 - 2.8577 1.00 5216 274 0.1279 0.1307 REMARK 3 2 2.8577 - 2.2685 1.00 5045 260 0.1015 0.1144 REMARK 3 3 2.2685 - 1.9819 1.00 4980 246 0.0900 0.0896 REMARK 3 4 1.9819 - 1.8007 1.00 4936 283 0.0845 0.0991 REMARK 3 5 1.8007 - 1.6717 1.00 4928 288 0.0822 0.0916 REMARK 3 6 1.6717 - 1.5731 1.00 4857 302 0.0752 0.0926 REMARK 3 7 1.5731 - 1.4943 1.00 4879 285 0.0745 0.0891 REMARK 3 8 1.4943 - 1.4293 1.00 4890 266 0.0732 0.0926 REMARK 3 9 1.4293 - 1.3743 1.00 4892 268 0.0771 0.0868 REMARK 3 10 1.3743 - 1.3268 1.00 4883 266 0.0766 0.0853 REMARK 3 11 1.3268 - 1.2854 1.00 4819 304 0.0748 0.0868 REMARK 3 12 1.2854 - 1.2486 1.00 4830 309 0.0749 0.0821 REMARK 3 13 1.2486 - 1.2158 1.00 4901 246 0.0734 0.0818 REMARK 3 14 1.2158 - 1.1861 1.00 4860 253 0.0773 0.0948 REMARK 3 15 1.1861 - 1.1591 1.00 4879 239 0.0812 0.0947 REMARK 3 16 1.1591 - 1.1345 1.00 4852 259 0.0822 0.0948 REMARK 3 17 1.1345 - 1.1118 1.00 4876 229 0.0829 0.0916 REMARK 3 18 1.1118 - 1.0908 1.00 4886 252 0.0928 0.1087 REMARK 3 19 1.0908 - 1.0713 1.00 4798 277 0.0987 0.1147 REMARK 3 20 1.0713 - 1.0531 1.00 4851 265 0.1017 0.1146 REMARK 3 21 1.0531 - 1.0362 1.00 4814 294 0.1159 0.1231 REMARK 3 22 1.0362 - 1.0202 1.00 4836 269 0.1213 0.1327 REMARK 3 23 1.0202 - 1.0052 1.00 4832 249 0.1316 0.1282 REMARK 3 24 1.0052 - 0.9910 1.00 4853 272 0.1503 0.1681 REMARK 3 25 0.9910 - 0.9777 0.99 4778 284 0.1780 0.1878 REMARK 3 26 0.9777 - 0.9650 0.99 4831 247 0.1866 0.2078 REMARK 3 27 0.9650 - 0.9529 1.00 4801 269 0.1856 0.2062 REMARK 3 28 0.9529 - 0.9414 1.00 4830 266 0.1972 0.2159 REMARK 3 29 0.9414 - 0.9305 1.00 4848 231 0.1969 0.2242 REMARK 3 30 0.9305 - 0.9200 0.99 4760 301 0.2152 0.2337 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 9.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2174 REMARK 3 ANGLE : 1.104 2997 REMARK 3 CHIRALITY : 0.093 332 REMARK 3 PLANARITY : 0.010 396 REMARK 3 DIHEDRAL : 12.676 837 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EQE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200007045. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I23 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2398 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 12M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 154417 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.920 REMARK 200 RESOLUTION RANGE LOW (A) : 84.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6EQD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 0.1 M MES, PH 6.0 20% PEG REMARK 280 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.55700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.27250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.69400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.27250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.55700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.69400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 PHE A 3 REMARK 465 PRO A 4 REMARK 465 ARG A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 ARG A 8 REMARK 465 LEU A 9 REMARK 465 MET A 10 REMARK 465 GLN A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 VAL A 14 REMARK 465 LEU A 15 REMARK 465 GLY A 16 REMARK 465 GLY A 17 REMARK 465 LEU A 18 REMARK 465 MET A 19 REMARK 465 ALA A 20 REMARK 465 VAL A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 THR A 26 REMARK 465 ALA A 27 REMARK 465 GLN A 28 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 519 O HOH A 523 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 73 35.33 -146.25 REMARK 500 THR A 88 -12.79 75.21 REMARK 500 SER A 160 -120.21 65.27 REMARK 500 SER A 214 -82.35 -132.27 REMARK 500 SER A 214 -86.09 -129.79 REMARK 500 SER A 214 -85.41 -130.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 123 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 791 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH A 792 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH A 793 DISTANCE = 7.00 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 193 OG REMARK 620 2 HOH A 662 O 100.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 204 OE1 REMARK 620 2 ASN A 233 OD1 78.1 REMARK 620 3 HOH A 401 O 119.6 58.0 REMARK 620 4 HOH A 417 O 85.8 81.5 51.3 REMARK 620 5 HOH A 643 O 145.3 67.6 43.4 93.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6EQD RELATED DB: PDB REMARK 900 INITAL STRUCTURE OF PETASE DBREF1 6EQE A 1 290 UNP PETH_IDESA DBREF2 6EQE A A0A0K8P6T7 1 290 SEQADV 6EQE LEU A 291 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE GLU A 292 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE HIS A 293 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE HIS A 294 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE HIS A 295 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE HIS A 296 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE HIS A 297 UNP A0A0K8P6T EXPRESSION TAG SEQADV 6EQE HIS A 298 UNP A0A0K8P6T EXPRESSION TAG SEQRES 1 A 298 MET ASN PHE PRO ARG ALA SER ARG LEU MET GLN ALA ALA SEQRES 2 A 298 VAL LEU GLY GLY LEU MET ALA VAL SER ALA ALA ALA THR SEQRES 3 A 298 ALA GLN THR ASN PRO TYR ALA ARG GLY PRO ASN PRO THR SEQRES 4 A 298 ALA ALA SER LEU GLU ALA SER ALA GLY PRO PHE THR VAL SEQRES 5 A 298 ARG SER PHE THR VAL SER ARG PRO SER GLY TYR GLY ALA SEQRES 6 A 298 GLY THR VAL TYR TYR PRO THR ASN ALA GLY GLY THR VAL SEQRES 7 A 298 GLY ALA ILE ALA ILE VAL PRO GLY TYR THR ALA ARG GLN SEQRES 8 A 298 SER SER ILE LYS TRP TRP GLY PRO ARG LEU ALA SER HIS SEQRES 9 A 298 GLY PHE VAL VAL ILE THR ILE ASP THR ASN SER THR LEU SEQRES 10 A 298 ASP GLN PRO SER SER ARG SER SER GLN GLN MET ALA ALA SEQRES 11 A 298 LEU ARG GLN VAL ALA SER LEU ASN GLY THR SER SER SER SEQRES 12 A 298 PRO ILE TYR GLY LYS VAL ASP THR ALA ARG MET GLY VAL SEQRES 13 A 298 MET GLY TRP SER MET GLY GLY GLY GLY SER LEU ILE SER SEQRES 14 A 298 ALA ALA ASN ASN PRO SER LEU LYS ALA ALA ALA PRO GLN SEQRES 15 A 298 ALA PRO TRP ASP SER SER THR ASN PHE SER SER VAL THR SEQRES 16 A 298 VAL PRO THR LEU ILE PHE ALA CYS GLU ASN ASP SER ILE SEQRES 17 A 298 ALA PRO VAL ASN SER SER ALA LEU PRO ILE TYR ASP SER SEQRES 18 A 298 MET SER ARG ASN ALA LYS GLN PHE LEU GLU ILE ASN GLY SEQRES 19 A 298 GLY SER HIS SER CYS ALA ASN SER GLY ASN SER ASN GLN SEQRES 20 A 298 ALA LEU ILE GLY LYS LYS GLY VAL ALA TRP MET LYS ARG SEQRES 21 A 298 PHE MET ASP ASN ASP THR ARG TYR SER THR PHE ALA CYS SEQRES 22 A 298 GLU ASN PRO ASN SER THR ARG VAL SER ASP PHE ARG THR SEQRES 23 A 298 ALA ASN CYS SER LEU GLU HIS HIS HIS HIS HIS HIS HET CL A 301 1 HET CL A 302 1 HET NA A 303 1 HET NA A 304 1 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 CL 2(CL 1-) FORMUL 4 NA 2(NA 1+) FORMUL 6 HOH *393(H2 O) HELIX 1 AA1 THR A 39 ALA A 45 1 7 HELIX 2 AA2 ARG A 90 LYS A 95 5 6 HELIX 3 AA3 TRP A 96 PHE A 106 1 11 HELIX 4 AA4 GLN A 119 GLY A 139 1 21 HELIX 5 AA5 SER A 160 ASN A 173 1 14 HELIX 6 AA6 SER A 214 MET A 222 1 9 HELIX 7 AA7 ASN A 246 ASP A 263 1 18 HELIX 8 AA8 ASP A 265 ARG A 267 5 3 HELIX 9 AA9 TYR A 268 GLU A 274 1 7 SHEET 1 AA1 6 VAL A 52 THR A 56 0 SHEET 2 AA1 6 ALA A 65 PRO A 71 -1 O VAL A 68 N PHE A 55 SHEET 3 AA1 6 VAL A 107 ASP A 112 -1 O VAL A 108 N TYR A 69 SHEET 4 AA1 6 VAL A 78 VAL A 84 1 N ILE A 81 O ILE A 109 SHEET 5 AA1 6 VAL A 149 GLY A 158 1 O ASP A 150 N VAL A 78 SHEET 6 AA1 6 ALA A 178 ALA A 179 1 O ALA A 178 N VAL A 156 SHEET 1 AA2 3 THR A 198 CYS A 203 0 SHEET 2 AA2 3 LYS A 227 ILE A 232 1 O GLN A 228 N ILE A 200 SHEET 3 AA2 3 VAL A 281 ALA A 287 -1 O ASP A 283 N GLU A 231 SSBOND 1 CYS A 203 CYS A 239 1555 1555 2.05 SSBOND 2 CYS A 273 CYS A 289 1555 1555 2.05 LINK OG SER A 193 NA NA A 303 1555 1555 2.71 LINK OE1 GLU A 204 NA NA A 304 1555 1555 2.38 LINK OD1 ASN A 233 NA NA A 304 1555 1555 2.37 LINK NA NA A 303 O HOH A 662 1555 1555 2.68 LINK NA NA A 304 O HOH A 401 1555 1555 2.03 LINK NA NA A 304 O HOH A 417 1555 1555 2.52 LINK NA NA A 304 O HOH A 643 1555 1555 3.08 SITE 1 AC1 4 TYR A 87 ARG A 132 SER A 160 MET A 161 SITE 1 AC2 3 SER A 207 HIS A 237 HOH A 773 SITE 1 AC3 5 ASN A 190 PHE A 191 SER A 193 HIS A 293 SITE 2 AC3 5 HOH A 662 SITE 1 AC4 5 GLU A 204 ASN A 233 HOH A 401 HOH A 417 SITE 2 AC4 5 HOH A 643 CRYST1 51.114 51.388 84.545 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019460 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011828 0.00000