HEADER TRANSFERASE 19-OCT-17 6ERT TITLE CRYSTAL STRUCTURE OF THE PROTEIN-KINASE A CATALYTIC SUBUNIT FROM TITLE 2 CRITECULUS GRISEUS IN COMPLEX WITH COMPOUNDS RKP193 AND RKP117 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: PKI 5-22 WITH R18BAR MUTATION. THE NON NATURAL AMINO COMPND 12 ACID IS DISORDERED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 ORGAN: OVARY; SOURCE 6 TISSUE: OVARY; SOURCE 7 GENE: PRKACA; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: GOLD PLYSS AG; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 14 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 15 ORGANISM_TAXID: 10029 KEYWDS COMPLEX, PEPTIDIC LIGAND, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.MUELLER,A.HEINE,G.KLEBE REVDAT 3 30-OCT-19 6ERT 1 COMPND HETNAM FORMUL REVDAT 2 15-MAY-19 6ERT 1 JRNL REVDAT 1 31-OCT-18 6ERT 0 JRNL AUTH J.M.MUELLER,R.KIRSCHNER,A.GEYER,G.KLEBE JRNL TITL CONCEPTIONAL DESIGN OF SELF-ASSEMBLING BISUBSTRATE-LIKE JRNL TITL 2 INHIBITORS OF PROTEIN KINASE A RESULTING IN A BORONIC ACID JRNL TITL 3 GLUTAMATE LINKAGE JRNL REF ACS OMEGA 2019 JRNL REFN ESSN 2470-1343 JRNL DOI 10.1021/ACSOMEGA.8B02364 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 36575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5509 - 4.2232 0.97 2806 148 0.1611 0.1835 REMARK 3 2 4.2232 - 3.3527 0.98 2697 142 0.1617 0.2119 REMARK 3 3 3.3527 - 2.9290 0.99 2710 143 0.1941 0.1934 REMARK 3 4 2.9290 - 2.6613 0.99 2666 140 0.1918 0.2228 REMARK 3 5 2.6613 - 2.4706 1.00 2687 141 0.1845 0.2133 REMARK 3 6 2.4706 - 2.3249 1.00 2692 142 0.1883 0.2176 REMARK 3 7 2.3249 - 2.2085 1.00 2670 141 0.1915 0.2500 REMARK 3 8 2.2085 - 2.1124 1.00 2662 140 0.2048 0.2415 REMARK 3 9 2.1124 - 2.0311 1.00 2655 139 0.2134 0.2569 REMARK 3 10 2.0311 - 1.9610 1.00 2679 142 0.2161 0.2789 REMARK 3 11 1.9610 - 1.8997 1.00 2654 139 0.2263 0.2999 REMARK 3 12 1.8997 - 1.8454 1.00 2672 141 0.2267 0.3188 REMARK 3 13 1.8454 - 1.7968 0.95 2497 130 0.2360 0.2643 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2904 REMARK 3 ANGLE : 0.976 3955 REMARK 3 CHIRALITY : 0.056 421 REMARK 3 PLANARITY : 0.007 529 REMARK 3 DIHEDRAL : 14.304 1699 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1178 30.7999 15.4325 REMARK 3 T TENSOR REMARK 3 T11: 0.3380 T22: 0.3758 REMARK 3 T33: 0.3364 T12: -0.1284 REMARK 3 T13: -0.0401 T23: 0.1388 REMARK 3 L TENSOR REMARK 3 L11: 1.2470 L22: 0.7224 REMARK 3 L33: 0.4551 L12: -0.9525 REMARK 3 L13: -0.1456 L23: 0.0977 REMARK 3 S TENSOR REMARK 3 S11: -0.1816 S12: -0.2144 S13: 0.3254 REMARK 3 S21: -0.2454 S22: 0.0521 S23: -0.3645 REMARK 3 S31: -0.0994 S32: 0.3269 S33: 0.1531 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6073 16.0547 -3.8559 REMARK 3 T TENSOR REMARK 3 T11: 0.3221 T22: 0.3320 REMARK 3 T33: 0.2319 T12: -0.0221 REMARK 3 T13: 0.0736 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 0.3786 L22: 0.1812 REMARK 3 L33: 0.1222 L12: -0.1927 REMARK 3 L13: 0.1431 L23: -0.1476 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: 0.0342 S13: 0.0726 REMARK 3 S21: -0.3231 S22: -0.0212 S23: 0.2177 REMARK 3 S31: -0.1296 S32: 0.0552 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5491 14.1130 -2.5717 REMARK 3 T TENSOR REMARK 3 T11: 0.2222 T22: 0.3296 REMARK 3 T33: 0.2158 T12: 0.0384 REMARK 3 T13: -0.0394 T23: -0.0807 REMARK 3 L TENSOR REMARK 3 L11: 1.2466 L22: 0.5274 REMARK 3 L33: 0.9872 L12: 0.7986 REMARK 3 L13: -0.4690 L23: -0.3192 REMARK 3 S TENSOR REMARK 3 S11: -0.1687 S12: 0.0048 S13: -0.1344 REMARK 3 S21: -0.2642 S22: 0.0165 S23: 0.1525 REMARK 3 S31: 0.0843 S32: -0.1452 S33: -0.4775 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3294 16.2315 12.8988 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.1515 REMARK 3 T33: 0.1162 T12: 0.0129 REMARK 3 T13: -0.0104 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.7358 L22: 0.4937 REMARK 3 L33: 0.6433 L12: -0.0904 REMARK 3 L13: 0.2955 L23: 0.1347 REMARK 3 S TENSOR REMARK 3 S11: 0.0273 S12: 0.1325 S13: -0.1138 REMARK 3 S21: 0.0154 S22: -0.0366 S23: 0.0366 REMARK 3 S31: -0.0262 S32: 0.2162 S33: 0.0019 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9984 21.1984 17.0535 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.1430 REMARK 3 T33: 0.2021 T12: 0.0363 REMARK 3 T13: -0.0139 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.7208 L22: 0.3221 REMARK 3 L33: 0.1455 L12: 0.4654 REMARK 3 L13: -0.0352 L23: 0.0403 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: 0.0535 S13: 0.1507 REMARK 3 S21: -0.2295 S22: -0.0709 S23: 0.0928 REMARK 3 S31: -0.0430 S32: 0.0826 S33: -0.0121 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7104 20.9286 26.5195 REMARK 3 T TENSOR REMARK 3 T11: 0.2230 T22: 0.1595 REMARK 3 T33: 0.2274 T12: 0.0198 REMARK 3 T13: 0.0086 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.4147 L22: 0.1979 REMARK 3 L33: 0.2151 L12: 0.1365 REMARK 3 L13: 0.1390 L23: -0.1035 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: -0.1567 S13: 0.0742 REMARK 3 S21: 0.1093 S22: -0.0050 S23: 0.2381 REMARK 3 S31: -0.1023 S32: -0.0526 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9835 14.8646 28.5452 REMARK 3 T TENSOR REMARK 3 T11: 0.2253 T22: 0.2434 REMARK 3 T33: 0.4491 T12: 0.0457 REMARK 3 T13: 0.0296 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 0.9080 L22: 0.2486 REMARK 3 L33: 0.2855 L12: 0.0544 REMARK 3 L13: -0.2478 L23: -0.2489 REMARK 3 S TENSOR REMARK 3 S11: 0.0783 S12: -0.2967 S13: -0.2094 REMARK 3 S21: 0.0462 S22: -0.0690 S23: 1.0222 REMARK 3 S31: -0.0495 S32: -0.2837 S33: -0.0393 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9987 15.6647 33.3095 REMARK 3 T TENSOR REMARK 3 T11: 0.2577 T22: 0.2333 REMARK 3 T33: 0.1586 T12: -0.0150 REMARK 3 T13: 0.0058 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.3613 L22: 1.1205 REMARK 3 L33: 1.0552 L12: 0.0446 REMARK 3 L13: 0.6465 L23: -0.6027 REMARK 3 S TENSOR REMARK 3 S11: -0.0365 S12: -0.4858 S13: -0.0089 REMARK 3 S21: 0.4511 S22: -0.0168 S23: -0.1547 REMARK 3 S31: -0.1946 S32: 0.2115 S33: -0.0617 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7136 13.9696 -2.2736 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.3511 REMARK 3 T33: 0.3020 T12: 0.0026 REMARK 3 T13: -0.0351 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.2126 L22: 0.3724 REMARK 3 L33: 0.7137 L12: -0.0270 REMARK 3 L13: 0.0251 L23: 0.5134 REMARK 3 S TENSOR REMARK 3 S11: -0.0500 S12: 0.1479 S13: -0.1042 REMARK 3 S21: -0.2172 S22: 0.0855 S23: 0.1976 REMARK 3 S31: 0.0577 S32: -0.0203 S33: -0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 8 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9266 2.8374 28.9652 REMARK 3 T TENSOR REMARK 3 T11: 0.2316 T22: 0.2005 REMARK 3 T33: 0.3730 T12: -0.0250 REMARK 3 T13: 0.0629 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.0525 L22: 0.0254 REMARK 3 L33: 0.0211 L12: -0.0100 REMARK 3 L13: 0.0209 L23: 0.0005 REMARK 3 S TENSOR REMARK 3 S11: -0.0778 S12: -0.1120 S13: -0.1221 REMARK 3 S21: 0.1825 S22: 0.2349 S23: 0.0817 REMARK 3 S31: -0.3126 S32: -0.0887 S33: -0.0002 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 17 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3561 12.1269 17.9668 REMARK 3 T TENSOR REMARK 3 T11: 0.2799 T22: 0.1862 REMARK 3 T33: 0.3922 T12: 0.0460 REMARK 3 T13: -0.0457 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.0474 L22: 0.2513 REMARK 3 L33: 0.3400 L12: 0.0931 REMARK 3 L13: 0.1013 L23: 0.2918 REMARK 3 S TENSOR REMARK 3 S11: 0.0873 S12: 0.0642 S13: -0.2004 REMARK 3 S21: -0.1900 S22: -0.0057 S23: 0.2408 REMARK 3 S31: -0.3728 S32: -0.2619 S33: 0.0032 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ERT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200007153. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36578 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 38.542 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.330 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04000 REMARK 200 FOR THE DATA SET : 20.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.42 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50300 REMARK 200 FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES-BIS-TRIS, 75 MM LITHIUM REMARK 280 CHLORIDE, 1 MM DTT, 0.1 MM SODIUM EDTA, 0.25 MM MEGA 8, 0.7 MM REMARK 280 PEPTIDIC LIGAND, 5 MM RKP117, 17% V/V METHANOL/WATER IN REMARK 280 RESERVOIR, PH 6.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.42400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.54200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.63250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.54200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.42400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.63250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 SEP A 10 REMARK 465 GLU A 11 REMARK 465 GLN A 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 SER A 14 OG REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 LYS A 21 CD CE NZ REMARK 470 LYS A 23 CE NZ REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 LYS A 29 NZ REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 THR A 51 OG1 CG2 REMARK 470 SER A 53 OG REMARK 470 LYS A 63 NZ REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 LYS A 78 CD CE NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 105 CD CE NZ REMARK 470 ILE A 135 CG1 CD1 REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 ARG A 190 NE CZ NH1 NH2 REMARK 470 VAL A 191 CG1 CG2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LYS A 213 CD CE NZ REMARK 470 LYS A 217 CE NZ REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 GLU A 248 CG CD OE1 OE2 REMARK 470 LYS A 249 CE NZ REMARK 470 VAL A 255 CG1 CG2 REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 VAL A 288 CG1 CG2 REMARK 470 LYS A 295 NZ REMARK 470 ILE A 303 CD1 REMARK 470 LYS A 309 CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 PHE A 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 335 CG1 CD1 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 339 CG1 CG2 CD1 REMARK 470 LYS A 342 NZ REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 GLU A 349 OE1 OE2 REMARK 470 LYS D 21 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 144 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 51 -162.83 -105.73 REMARK 500 LYS A 319 49.97 -97.85 REMARK 500 ARG D 18 46.99 -109.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BVZ A 401 DBREF 6ERT A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF1 6ERT D 8 25 UNP A0A061IH64_CRIGR DBREF2 6ERT D A0A061IH64 6 23 SEQADV 6ERT GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 6ERT HIS A -1 UNP P25321 EXPRESSION TAG SEQADV 6ERT LYS D 21 UNP A0A061IH6 ARG 19 ENGINEERED MUTATION SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SEP GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 D 18 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 D 18 LYS ARG ASN ALA ILE MODRES 6ERT SEP A 139 SER MODIFIED RESIDUE MODRES 6ERT TPO A 197 THR MODIFIED RESIDUE MODRES 6ERT SEP A 338 SER MODIFIED RESIDUE HET SEP A 139 14 HET TPO A 197 17 HET SEP A 338 14 HET BVZ A 401 52 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM BVZ [2-[(4-ISOQUINOLIN-5-YLSULFONYL-1,4-DIAZEPAN-1-YL) HETNAM 2 BVZ METHYL]PHENYL]-TRIS(OXIDANYL)BORANUIDE HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 BVZ C21 H25 B N3 O5 S 1- FORMUL 4 HOH *139(H2 O) HELIX 1 AA1 GLU A 13 SER A 32 1 20 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 VAL A 98 1 15 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SEP A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 GLY A 253 1 12 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 VAL A 288 ASN A 293 1 6 HELIX 14 AB5 HIS A 294 ALA A 298 5 5 HELIX 15 AB6 ASP A 301 GLN A 307 1 7 HELIX 16 AB7 GLY A 344 THR A 348 5 5 HELIX 17 AB8 THR D 9 GLY D 17 1 9 SHEET 1 AA1 5 PHE A 43 GLY A 50 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O VAL A 57 N LEU A 49 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O MET A 71 N MET A 58 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 118 N LYS A 72 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N PHE A 110 O TYR A 117 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK OE2 GLU A 127 B26 BVZ A 401 1555 1555 1.52 LINK C PHE A 138 N SEP A 139 1555 1555 1.34 LINK C SEP A 139 N GLU A 140 1555 1555 1.34 LINK C TRP A 196 N TPO A 197 1555 1555 1.32 LINK C TPO A 197 N LEU A 198 1555 1555 1.34 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 SITE 1 AC1 15 VAL A 57 ALA A 70 MET A 120 GLU A 121 SITE 2 AC1 15 TYR A 122 VAL A 123 GLU A 127 GLU A 170 SITE 3 AC1 15 ASN A 171 LEU A 173 THR A 183 ASP A 184 SITE 4 AC1 15 PHE A 327 LYS D 21 ARG D 22 CRYST1 68.848 73.265 77.084 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014525 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013649 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012973 0.00000