HEADER RNA 19-OCT-17 6ES4 TITLE A CRYPTIC RNA-BINDING DOMAIN MEDIATES SYNCRIP RECOGNITION AND EXOSOMAL TITLE 2 PARTITIONING OF MIRNA TARGETS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNCRIP, ISOFORM K; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: SYP, AI945337, ANON-WO0118547.613, DMEL\CG17838, L(3)03806, SOURCE 6 SYP, CG17838, DMEL_CG17838; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MIRNA, EXOSOME, SYNCRIP, RNA-BINDING, RNA EXPDTA X-RAY DIFFRACTION AUTHOR F.HOBOR,A.DALLMANN,N.J.BALL,C.CICCHINI,C.BATTISTELLI,R.W.OGRODOWICZ, AUTHOR 2 E.CHRISTODOULOU,S.R.MARTIN,A.CASTELLO,M.TRIPODI,I.A.TAYLOR,A.RAMOS REVDAT 1 07-MAR-18 6ES4 0 JRNL AUTH F.HOBOR,A.DALLMANN,N.J.BALL,C.CICCHINI,C.BATTISTELLI, JRNL AUTH 2 R.W.OGRODOWICZ,E.CHRISTODOULOU,S.R.MARTIN,A.CASTELLO, JRNL AUTH 3 M.TRIPODI,I.A.TAYLOR,A.RAMOS JRNL TITL A CRYPTIC RNA-BINDING DOMAIN MEDIATES SYNCRIP RECOGNITION JRNL TITL 2 AND EXOSOMAL PARTITIONING OF MIRNA TARGETS. JRNL REF NAT COMMUN V. 9 831 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29483512 JRNL DOI 10.1038/S41467-018-03182-3 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 33546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1650 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5667 - 5.0332 0.98 2695 126 0.1610 0.1844 REMARK 3 2 5.0332 - 3.9965 0.99 2674 124 0.1374 0.1635 REMARK 3 3 3.9965 - 3.4917 0.99 2648 151 0.1627 0.1892 REMARK 3 4 3.4917 - 3.1726 0.99 2639 151 0.1793 0.2076 REMARK 3 5 3.1726 - 2.9453 1.00 2690 133 0.1945 0.2200 REMARK 3 6 2.9453 - 2.7717 1.00 2626 147 0.2023 0.2160 REMARK 3 7 2.7717 - 2.6330 1.00 2687 132 0.2015 0.2641 REMARK 3 8 2.6330 - 2.5184 1.00 2681 129 0.2013 0.2439 REMARK 3 9 2.5184 - 2.4214 1.00 2596 143 0.2042 0.2774 REMARK 3 10 2.4214 - 2.3379 1.00 2742 124 0.2068 0.2734 REMARK 3 11 2.3379 - 2.2648 1.00 2631 137 0.2173 0.2557 REMARK 3 12 2.2648 - 2.2001 0.97 2587 153 0.2404 0.2925 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3259 REMARK 3 ANGLE : 0.753 4407 REMARK 3 CHIRALITY : 0.027 480 REMARK 3 PLANARITY : 0.003 565 REMARK 3 DIHEDRAL : 13.245 1191 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 22:121) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9347 120.0156 113.3148 REMARK 3 T TENSOR REMARK 3 T11: 0.7055 T22: 0.5619 REMARK 3 T33: 0.5483 T12: -0.0846 REMARK 3 T13: 0.0080 T23: -0.1503 REMARK 3 L TENSOR REMARK 3 L11: 1.0698 L22: 4.1275 REMARK 3 L33: 3.8460 L12: 1.0338 REMARK 3 L13: 0.9866 L23: 3.8114 REMARK 3 S TENSOR REMARK 3 S11: -0.1051 S12: 0.0554 S13: -0.0758 REMARK 3 S21: -0.1639 S22: -0.0442 S23: 0.1668 REMARK 3 S31: -0.0345 S32: 0.0106 S33: 0.1417 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 122:243) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7579 97.2544 93.2616 REMARK 3 T TENSOR REMARK 3 T11: 0.1903 T22: 0.2968 REMARK 3 T33: 0.3297 T12: -0.0055 REMARK 3 T13: 0.0132 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 2.4094 L22: 2.9400 REMARK 3 L33: 3.1671 L12: 0.4232 REMARK 3 L13: -0.1534 L23: -0.3073 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: 0.0029 S13: 0.2114 REMARK 3 S21: 0.1494 S22: -0.0442 S23: 0.2143 REMARK 3 S31: 0.0459 S32: 0.0439 S33: 0.0806 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 22:104) REMARK 3 ORIGIN FOR THE GROUP (A): 38.6030 49.8197 81.9799 REMARK 3 T TENSOR REMARK 3 T11: 0.7597 T22: 0.4924 REMARK 3 T33: 0.5540 T12: 0.1536 REMARK 3 T13: 0.0779 T23: -0.0748 REMARK 3 L TENSOR REMARK 3 L11: 1.9240 L22: 4.4548 REMARK 3 L33: 3.0586 L12: -2.5977 REMARK 3 L13: -1.0894 L23: 2.6560 REMARK 3 S TENSOR REMARK 3 S11: -0.2389 S12: -0.1851 S13: -0.0733 REMARK 3 S21: 0.8423 S22: 0.2877 S23: 0.3908 REMARK 3 S31: -0.8017 S32: -0.2001 S33: -0.0602 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 122:243) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9010 72.2847 99.1353 REMARK 3 T TENSOR REMARK 3 T11: 0.4632 T22: 0.3370 REMARK 3 T33: 0.3390 T12: 0.1199 REMARK 3 T13: -0.0314 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 3.1786 L22: 4.4766 REMARK 3 L33: 3.2053 L12: 0.0958 REMARK 3 L13: -0.5213 L23: -2.0435 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: -0.0607 S13: -0.3840 REMARK 3 S21: -0.5069 S22: -0.1780 S23: 0.0754 REMARK 3 S31: 0.6566 S32: 0.1763 S33: 0.0787 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ES4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1200007157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33579 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.360 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER 2.5.6, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M AMMONIUM SULPHATE, 0.1 M SODIUM REMARK 280 CITRATE PH 6, SEEDING, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 64.26400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 106 REMARK 465 SER A 107 REMARK 465 ARG A 108 REMARK 465 ALA A 109 REMARK 465 SER A 110 REMARK 465 GLN A 111 REMARK 465 GLN A 112 REMARK 465 GLY A 113 REMARK 465 VAL A 114 REMARK 465 ALA A 115 REMARK 465 ALA A 116 REMARK 465 PRO A 117 REMARK 465 ALA A 118 REMARK 465 THR A 119 REMARK 465 VAL A 120 REMARK 465 GLN B 105 REMARK 465 LYS B 106 REMARK 465 SER B 107 REMARK 465 ARG B 108 REMARK 465 ALA B 109 REMARK 465 SER B 110 REMARK 465 GLN B 111 REMARK 465 GLN B 112 REMARK 465 GLY B 113 REMARK 465 VAL B 114 REMARK 465 ALA B 115 REMARK 465 ALA B 116 REMARK 465 PRO B 117 REMARK 465 ALA B 118 REMARK 465 THR B 119 REMARK 465 VAL B 120 REMARK 465 LYS B 121 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 GLU A 46 CG CD OE1 OE2 REMARK 470 LYS A 49 CD CE NZ REMARK 470 LYS A 52 CE NZ REMARK 470 LEU A 58 CD1 CD2 REMARK 470 ARG A 61 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 68 OE1 OE2 REMARK 470 ASP A 72 CG OD1 OD2 REMARK 470 VAL A 77 CG1 CG2 REMARK 470 ARG A 104 CZ NH1 NH2 REMARK 470 GLN A 105 CG CD OE1 NE2 REMARK 470 LYS A 129 CE NZ REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 ASP A 174 CG OD1 OD2 REMARK 470 ARG A 205 CZ NH1 NH2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 GLU B 26 CG CD OE1 OE2 REMARK 470 ASP B 59 CG OD1 OD2 REMARK 470 GLU B 60 OE1 OE2 REMARK 470 ARG B 61 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 470 GLN B 80 CD OE1 NE2 REMARK 470 GLU B 83 CG CD OE1 OE2 REMARK 470 ASN B 85 CG OD1 ND2 REMARK 470 GLU B 87 CG CD OE1 OE2 REMARK 470 SER B 93 OG REMARK 470 LYS B 101 CE NZ REMARK 470 ARG B 104 NE CZ NH1 NH2 REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 470 LYS B 129 CD CE NZ REMARK 470 LYS B 173 CG CD CE NZ REMARK 470 ASP B 174 CG OD1 OD2 REMARK 470 MET B 200 CG SD CE REMARK 470 THR B 201 OG1 CG2 REMARK 470 ARG B 223 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET B 200 -61.85 -91.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 DBREF1 6ES4 A 22 243 UNP A0A0B4KHH8_DROME DBREF2 6ES4 A A0A0B4KHH8 56 277 DBREF1 6ES4 B 22 243 UNP A0A0B4KHH8_DROME DBREF2 6ES4 B A0A0B4KHH8 56 277 SEQRES 1 A 222 GLY GLU ARG THR GLU ASP TYR PRO LYS LEU LEU GLU TYR SEQRES 2 A 222 GLY LEU ASP LYS LYS VAL ALA GLY LYS LEU ASP GLU ILE SEQRES 3 A 222 TYR LYS THR GLY LYS LEU ALA HIS ALA GLU LEU ASP GLU SEQRES 4 A 222 ARG ALA LEU ASP ALA LEU LYS GLU PHE PRO VAL ASP GLY SEQRES 5 A 222 ALA LEU ASN VAL LEU GLY GLN PHE LEU GLU SER ASN LEU SEQRES 6 A 222 GLU HIS VAL SER ASN LYS SER ALA TYR LEU CYS GLY VAL SEQRES 7 A 222 MET LYS THR TYR ARG GLN LYS SER ARG ALA SER GLN GLN SEQRES 8 A 222 GLY VAL ALA ALA PRO ALA THR VAL LYS GLY PRO ASP GLU SEQRES 9 A 222 ASP LYS ILE LYS LYS ILE LEU GLU ARG THR GLY TYR THR SEQRES 10 A 222 LEU ASP VAL THR THR GLY GLN ARG LYS TYR GLY GLY PRO SEQRES 11 A 222 PRO PRO HIS TRP GLU GLY ASN VAL PRO GLY ASN GLY CYS SEQRES 12 A 222 GLU VAL PHE CYS GLY LYS ILE PRO LYS ASP MET TYR GLU SEQRES 13 A 222 ASP GLU LEU ILE PRO LEU PHE GLU ASN CME GLY ILE ILE SEQRES 14 A 222 TRP ASP LEU ARG LEU MET MET ASP PRO MET THR GLY THR SEQRES 15 A 222 ASN ARG GLY TYR ALA PHE VAL THR PHE THR ASN ARG GLU SEQRES 16 A 222 ALA ALA VAL ASN ALA VAL ARG GLN LEU ASP ASN HIS GLU SEQRES 17 A 222 ILE LYS PRO GLY LYS CYS LEU LYS ILE ASN ILE SER VAL SEQRES 18 A 222 PRO SEQRES 1 B 222 GLY GLU ARG THR GLU ASP TYR PRO LYS LEU LEU GLU TYR SEQRES 2 B 222 GLY LEU ASP LYS LYS VAL ALA GLY LYS LEU ASP GLU ILE SEQRES 3 B 222 TYR LYS THR GLY LYS LEU ALA HIS ALA GLU LEU ASP GLU SEQRES 4 B 222 ARG ALA LEU ASP ALA LEU LYS GLU PHE PRO VAL ASP GLY SEQRES 5 B 222 ALA LEU ASN VAL LEU GLY GLN PHE LEU GLU SER ASN LEU SEQRES 6 B 222 GLU HIS VAL SER ASN LYS SER ALA TYR LEU CYS GLY VAL SEQRES 7 B 222 MET LYS THR TYR ARG GLN LYS SER ARG ALA SER GLN GLN SEQRES 8 B 222 GLY VAL ALA ALA PRO ALA THR VAL LYS GLY PRO ASP GLU SEQRES 9 B 222 ASP LYS ILE LYS LYS ILE LEU GLU ARG THR GLY TYR THR SEQRES 10 B 222 LEU ASP VAL THR THR GLY GLN ARG LYS TYR GLY GLY PRO SEQRES 11 B 222 PRO PRO HIS TRP GLU GLY ASN VAL PRO GLY ASN GLY CYS SEQRES 12 B 222 GLU VAL PHE CYS GLY LYS ILE PRO LYS ASP MET TYR GLU SEQRES 13 B 222 ASP GLU LEU ILE PRO LEU PHE GLU ASN CME GLY ILE ILE SEQRES 14 B 222 TRP ASP LEU ARG LEU MET MET ASP PRO MET THR GLY THR SEQRES 15 B 222 ASN ARG GLY TYR ALA PHE VAL THR PHE THR ASN ARG GLU SEQRES 16 B 222 ALA ALA VAL ASN ALA VAL ARG GLN LEU ASP ASN HIS GLU SEQRES 17 B 222 ILE LYS PRO GLY LYS CYS LEU LYS ILE ASN ILE SER VAL SEQRES 18 B 222 PRO MODRES 6ES4 CME A 187 CYS MODIFIED RESIDUE MODRES 6ES4 CME B 187 CYS MODIFIED RESIDUE HET CME A 187 10 HET CME B 187 10 HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET SO4 B 301 5 HET SO4 B 302 5 HET EDO B 303 4 HET EDO B 304 4 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 3 SO4 7(O4 S 2-) FORMUL 8 EDO 6(C2 H6 O2) FORMUL 16 HOH *76(H2 O) HELIX 1 AA1 ASP A 27 TYR A 34 1 8 HELIX 2 AA2 ASP A 37 GLY A 51 1 15 HELIX 3 AA3 ASP A 59 GLU A 68 1 10 HELIX 4 AA4 PRO A 70 GLU A 83 1 14 HELIX 5 AA5 ASN A 91 ARG A 104 1 14 HELIX 6 AA6 ASP A 124 GLY A 136 1 13 HELIX 7 AA7 GLY A 161 GLY A 163 5 3 HELIX 8 AA8 TYR A 176 ASN A 186 1 11 HELIX 9 AA9 ASN A 214 ASP A 226 1 13 HELIX 10 AB1 ASP B 27 GLY B 35 1 9 HELIX 11 AB2 ASP B 37 GLY B 51 1 15 HELIX 12 AB3 ALA B 54 LEU B 58 5 5 HELIX 13 AB4 ASP B 59 PHE B 69 1 11 HELIX 14 AB5 PRO B 70 GLU B 83 1 14 HELIX 15 AB6 ASN B 91 ARG B 104 1 14 HELIX 16 AB7 ASP B 124 GLY B 136 1 13 HELIX 17 AB8 TYR B 176 ASN B 186 1 11 HELIX 18 AB9 ASN B 214 ASP B 226 1 13 SHEET 1 AA1 6 LEU A 139 VAL A 141 0 SHEET 2 AA1 6 GLN A 145 GLY A 149 -1 O LYS A 147 N ASP A 140 SHEET 3 AA1 6 ILE A 190 MET A 197 -1 O LEU A 193 N TYR A 148 SHEET 4 AA1 6 ASN A 204 PHE A 212 -1 O THR A 211 N TRP A 191 SHEET 5 AA1 6 GLU A 165 GLY A 169 -1 N CYS A 168 O ALA A 208 SHEET 6 AA1 6 LYS A 237 ILE A 240 -1 O ASN A 239 N PHE A 167 SHEET 1 AA2 2 GLU A 229 LYS A 231 0 SHEET 2 AA2 2 LYS A 234 CYS A 235 -1 O LYS A 234 N LYS A 231 SHEET 1 AA3 6 LEU B 139 THR B 142 0 SHEET 2 AA3 6 GLN B 145 GLY B 149 -1 O GLN B 145 N THR B 142 SHEET 3 AA3 6 ILE B 190 MET B 197 -1 O LEU B 193 N TYR B 148 SHEET 4 AA3 6 ASN B 204 PHE B 212 -1 O THR B 211 N TRP B 191 SHEET 5 AA3 6 GLU B 165 GLY B 169 -1 N CYS B 168 O ALA B 208 SHEET 6 AA3 6 LYS B 237 ILE B 240 -1 O ASN B 239 N PHE B 167 SHEET 1 AA4 2 GLU B 229 LYS B 231 0 SHEET 2 AA4 2 LYS B 234 CYS B 235 -1 O LYS B 234 N LYS B 231 LINK C ASN A 186 N CME A 187 1555 1555 1.33 LINK C CME A 187 N GLY A 188 1555 1555 1.33 LINK C ASN B 186 N CME B 187 1555 1555 1.33 LINK C CME B 187 N GLY B 188 1555 1555 1.33 CISPEP 1 GLY A 150 PRO A 151 0 3.78 CISPEP 2 GLY B 150 PRO B 151 0 0.41 SITE 1 AC1 3 LYS A 130 ARG A 134 GLN B 224 SITE 1 AC2 4 ASN A 158 HOH A 413 HOH A 443 HIS B 154 SITE 1 AC3 3 PRO A 172 LYS A 173 LYS A 234 SITE 1 AC4 3 ASN A 158 CME A 187 HIS A 228 SITE 1 AC5 2 ARG A 215 HOH A 428 SITE 1 AC6 5 TYR A 137 TYR A 148 GLU A 185 ILE A 190 SITE 2 AC6 5 HOH A 434 SITE 1 AC7 4 TYR A 137 PRO A 152 TYR B 137 PRO B 152 SITE 1 AC8 5 ASN A 91 ALA A 94 TYR A 95 THR A 142 SITE 2 AC8 5 THR A 143 SITE 1 AC9 2 ARG A 194 PHE A 209 SITE 1 AD1 4 ARG A 223 GLN A 224 LYS B 130 ARG B 134 SITE 1 AD2 1 LYS B 173 SITE 1 AD3 5 TYR B 137 TYR B 148 GLU B 185 ILE B 189 SITE 2 AD3 5 ILE B 190 SITE 1 AD4 4 GLU A 185 GLY A 188 THR B 135 GLU B 185 CRYST1 33.783 128.528 79.585 90.00 101.12 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029601 0.000000 0.005818 0.00000 SCALE2 0.000000 0.007780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012806 0.00000