HEADER TRANSFERASE 02-NOV-17 6EVS TITLE CHARACTERIZATION OF 2-DEOXYRIBOSYLTRANSFERASE FROM PSYCHROTOLERANT TITLE 2 BACTERIUM BACILLUS PSYCHROSACCHAROLYTICUS: A SUITABLE BIOCATALYST FOR TITLE 3 THE INDUSTRIAL SYNTHESIS OF ANTIVIRAL AND ANTITUMORAL NUCLEOSIDES COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-DEOXYRIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.4.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS PSYCHROSACCHAROLYTICUS; SOURCE 3 ORGANISM_TAXID: 1407; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS 2-DEOXYRIBOSYLTRANSFERASE, ENZYMATIC SYNTHESIS, OLIGOMERIC ASSEMBLY, KEYWDS 2 PROTEIN CRYSTALLOGRAPHY, PURINE NUCLEOSIDE ANALOGUES, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.FRESCO-TABOHADA,J.FERNANDEZ-LUCAS,C.ACEBAL,M.ARROYO,F.RAMON, AUTHOR 2 J.M.MANCHENO,I.DE LA MATA REVDAT 3 17-JAN-24 6EVS 1 REMARK REVDAT 2 29-MAY-19 6EVS 1 JRNL REVDAT 1 14-NOV-18 6EVS 0 JRNL AUTH A.FRESCO-TABOHADA,J.FERNANDEZ-LUCAS,C.ACEBAL,M.ARROYO, JRNL AUTH 2 F.RAMON,I.DE LA MATA,J.M.MANCHENO JRNL TITL 2'-DEOXYRIBOSYLTRANSFERASE FROM BACILLUS JRNL TITL 2 PSYCHROSACCHAROLYTICUS: A MESOPHILIC-LIKE BIOCATALYST FOR JRNL TITL 3 THE SYNTHESIS OF MODIFIED NUCLEOSIDES FROM A PSYCHROTOLERANT JRNL TITL 4 BACTERIUM JRNL REF CATALYSTS 2019 JRNL REFN ESSN 2073-4344 JRNL DOI 10.3390/CATAL8010008 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 20783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0768 - 3.7994 1.00 2474 128 0.1607 0.2013 REMARK 3 2 3.7994 - 3.0161 1.00 2479 122 0.1647 0.1796 REMARK 3 3 3.0161 - 2.6350 1.00 2466 132 0.1815 0.2194 REMARK 3 4 2.6350 - 2.3941 1.00 2463 128 0.1798 0.2363 REMARK 3 5 2.3941 - 2.2226 1.00 2466 138 0.1913 0.2312 REMARK 3 6 2.2226 - 2.0915 1.00 2448 145 0.2029 0.2752 REMARK 3 7 2.0915 - 1.9868 1.00 2482 125 0.2300 0.2611 REMARK 3 8 1.9868 - 1.9003 1.00 2438 149 0.2722 0.3207 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2328 REMARK 3 ANGLE : 0.927 3171 REMARK 3 CHIRALITY : 0.055 335 REMARK 3 PLANARITY : 0.007 409 REMARK 3 DIHEDRAL : 3.049 1602 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0480 -6.1721 2.2171 REMARK 3 T TENSOR REMARK 3 T11: 0.2795 T22: 0.3623 REMARK 3 T33: 0.2528 T12: -0.0557 REMARK 3 T13: -0.0675 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 5.9477 L22: 4.8195 REMARK 3 L33: 3.1239 L12: 1.0090 REMARK 3 L13: -0.3170 L23: -0.2066 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: 0.3477 S13: -0.1222 REMARK 3 S21: -0.3493 S22: -0.0266 S23: 0.3856 REMARK 3 S31: 0.1430 S32: -0.4542 S33: 0.0234 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6658 -14.8216 10.5283 REMARK 3 T TENSOR REMARK 3 T11: 0.3411 T22: 0.3173 REMARK 3 T33: 0.4624 T12: -0.0657 REMARK 3 T13: -0.1172 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 2.8906 L22: 3.7098 REMARK 3 L33: 3.0027 L12: 0.6367 REMARK 3 L13: -0.7410 L23: -1.7307 REMARK 3 S TENSOR REMARK 3 S11: 0.0685 S12: 0.1742 S13: -0.7165 REMARK 3 S21: -0.6105 S22: 0.1252 S23: 0.0724 REMARK 3 S31: 0.6396 S32: -0.3210 S33: -0.1401 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6973 -4.1822 14.7495 REMARK 3 T TENSOR REMARK 3 T11: 0.8242 T22: 1.0434 REMARK 3 T33: 1.0517 T12: 0.0013 REMARK 3 T13: 0.0289 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.8232 L22: 7.2022 REMARK 3 L33: 8.7973 L12: -3.4702 REMARK 3 L13: 1.2776 L23: -4.5986 REMARK 3 S TENSOR REMARK 3 S11: 0.6761 S12: -0.1668 S13: -0.4450 REMARK 3 S21: 1.0180 S22: 0.6047 S23: 1.6966 REMARK 3 S31: 0.1279 S32: -1.7912 S33: -1.2247 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1377 5.4654 9.4173 REMARK 3 T TENSOR REMARK 3 T11: 0.2434 T22: 0.3664 REMARK 3 T33: 0.4639 T12: 0.0652 REMARK 3 T13: -0.0155 T23: 0.0452 REMARK 3 L TENSOR REMARK 3 L11: 2.1478 L22: 2.8578 REMARK 3 L33: 2.8519 L12: 0.1339 REMARK 3 L13: 0.8828 L23: 0.0243 REMARK 3 S TENSOR REMARK 3 S11: 0.0778 S12: 0.1901 S13: 0.1537 REMARK 3 S21: -0.1455 S22: -0.0092 S23: 0.6442 REMARK 3 S31: -0.3125 S32: -0.5878 S33: -0.0487 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.9093 -0.9181 38.1371 REMARK 3 T TENSOR REMARK 3 T11: 0.3585 T22: 0.4884 REMARK 3 T33: 0.4715 T12: 0.0301 REMARK 3 T13: 0.1199 T23: 0.0527 REMARK 3 L TENSOR REMARK 3 L11: 7.2064 L22: 3.5686 REMARK 3 L33: 4.7845 L12: 0.0788 REMARK 3 L13: -1.5193 L23: 0.6053 REMARK 3 S TENSOR REMARK 3 S11: -0.1198 S12: -0.5540 S13: -0.2364 REMARK 3 S21: 0.6201 S22: 0.3089 S23: 0.6636 REMARK 3 S31: -0.1814 S32: -0.5346 S33: -0.1425 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2043 7.6449 28.9344 REMARK 3 T TENSOR REMARK 3 T11: 0.2582 T22: 0.3605 REMARK 3 T33: 0.5060 T12: 0.0127 REMARK 3 T13: 0.0536 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 2.9928 L22: 1.2136 REMARK 3 L33: 3.4871 L12: -0.5746 REMARK 3 L13: -0.1604 L23: -1.5628 REMARK 3 S TENSOR REMARK 3 S11: 0.0911 S12: -0.0804 S13: 0.0526 REMARK 3 S21: 0.2699 S22: 0.2126 S23: 0.5974 REMARK 3 S31: -0.1287 S32: -0.4805 S33: -0.1734 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2948 -11.1600 30.7157 REMARK 3 T TENSOR REMARK 3 T11: 0.3277 T22: 0.3471 REMARK 3 T33: 0.5376 T12: -0.0535 REMARK 3 T13: 0.0835 T23: 0.0692 REMARK 3 L TENSOR REMARK 3 L11: 2.9500 L22: 2.4218 REMARK 3 L33: 4.4159 L12: -0.0855 REMARK 3 L13: -1.0109 L23: -1.2476 REMARK 3 S TENSOR REMARK 3 S11: -0.0873 S12: -0.4397 S13: -0.6276 REMARK 3 S21: 0.3492 S22: 0.0341 S23: 0.7134 REMARK 3 S31: 0.4637 S32: -0.4006 S33: 0.0673 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6EVS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1200007330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20796 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 37.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.53400 REMARK 200 R SYM FOR SHELL (I) : 0.53400 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1S2G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IN 3 M SODIUM NITRATE, 0.1 M SODIUM REMARK 280 ACETATE TRIHYDRATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.77350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.04614 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.41467 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 53.77350 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 31.04614 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.41467 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 53.77350 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 31.04614 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.41467 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.09229 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 40.82933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 62.09229 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 40.82933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 62.09229 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 40.82933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 261 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 262 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 241 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 139 REMARK 465 ALA A 140 REMARK 465 VAL A 141 REMARK 465 LYS A 142 REMARK 465 MET B 1 REMARK 465 LYS B 139 REMARK 465 ALA B 140 REMARK 465 VAL B 141 REMARK 465 LYS B 142 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 249 O HOH B 205 1.95 REMARK 500 OG SER B 48 O HOH B 201 2.06 REMARK 500 ND2 ASN A 76 O HOH A 201 2.10 REMARK 500 O HOH A 260 O HOH B 205 2.11 REMARK 500 ND2 ASN A 76 O HOH A 202 2.14 REMARK 500 O HOH A 236 O HOH A 251 2.17 REMARK 500 OG1 THR B 111 O HOH B 202 2.18 REMARK 500 O MET A 109 OG SER A 113 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 10 44.35 -152.69 REMARK 500 LEU A 41 120.84 76.63 REMARK 500 ASP A 75 45.19 -95.47 REMARK 500 TYR A 77 28.51 28.75 REMARK 500 PHE B 10 47.61 -153.09 REMARK 500 PRO B 42 44.50 -84.80 REMARK 500 TYR B 77 48.48 -53.26 REMARK 500 GLU B 104 -142.78 -87.60 REMARK 500 REMARK 500 REMARK: NULL DBREF 6EVS A 1 142 PDB 6EVS 6EVS 1 142 DBREF 6EVS B 1 142 PDB 6EVS 6EVS 1 142 SEQRES 1 A 142 MET ALA LYS ILE TYR LEU ALA SER PRO PHE PHE ASN GLU SEQRES 2 A 142 GLU GLN LEU LYS HIS VAL SER LYS ALA GLU GLN VAL LEU SEQRES 3 A 142 ARG ASP LEU GLY HIS THR VAL PHE SER PRO ARG GLU ASN SEQRES 4 A 142 GLN LEU PRO GLU VAL GLU PHE GLY SER PHE GLU TRP ARG SEQRES 5 A 142 THR PHE VAL PHE LYS ASN ASP LEU GLU HIS ILE LYS TRP SEQRES 6 A 142 ALA ASP ILE THR PHE GLY ILE ILE GLY ASP ASN TYR ASP SEQRES 7 A 142 ASP THR GLY THR ALA TRP GLU LEU GLY ALA SER TYR ILE SEQRES 8 A 142 LEU GLY LYS PRO VAL MET LEU PHE SER PRO THR GLY GLU SEQRES 9 A 142 ILE ILE ASN LEU MET ILE THR ASP SER LEU HIS ALA TYR SEQRES 10 A 142 PHE GLU ASP TRP ASN ASP VAL GLU ASN TYR ASP PHE ALA SEQRES 11 A 142 THR LEU PRO ILE LYS PRO TYR LEU LYS ALA VAL LYS SEQRES 1 B 142 MET ALA LYS ILE TYR LEU ALA SER PRO PHE PHE ASN GLU SEQRES 2 B 142 GLU GLN LEU LYS HIS VAL SER LYS ALA GLU GLN VAL LEU SEQRES 3 B 142 ARG ASP LEU GLY HIS THR VAL PHE SER PRO ARG GLU ASN SEQRES 4 B 142 GLN LEU PRO GLU VAL GLU PHE GLY SER PHE GLU TRP ARG SEQRES 5 B 142 THR PHE VAL PHE LYS ASN ASP LEU GLU HIS ILE LYS TRP SEQRES 6 B 142 ALA ASP ILE THR PHE GLY ILE ILE GLY ASP ASN TYR ASP SEQRES 7 B 142 ASP THR GLY THR ALA TRP GLU LEU GLY ALA SER TYR ILE SEQRES 8 B 142 LEU GLY LYS PRO VAL MET LEU PHE SER PRO THR GLY GLU SEQRES 9 B 142 ILE ILE ASN LEU MET ILE THR ASP SER LEU HIS ALA TYR SEQRES 10 B 142 PHE GLU ASP TRP ASN ASP VAL GLU ASN TYR ASP PHE ALA SEQRES 11 B 142 THR LEU PRO ILE LYS PRO TYR LEU LYS ALA VAL LYS FORMUL 3 HOH *104(H2 O) HELIX 1 AA1 ASN A 12 LEU A 29 1 18 HELIX 2 AA2 SER A 35 ASN A 39 5 5 HELIX 3 AA3 SER A 48 ALA A 66 1 19 HELIX 4 AA4 ASP A 79 LEU A 92 1 14 HELIX 5 AA5 ASN A 107 ASP A 112 1 6 HELIX 6 AA6 ASP A 120 TYR A 127 1 8 HELIX 7 AA7 ASN B 12 LEU B 29 1 18 HELIX 8 AA8 SER B 35 ASN B 39 5 5 HELIX 9 AA9 SER B 48 ALA B 66 1 19 HELIX 10 AB1 ASP B 79 GLY B 93 1 15 HELIX 11 AB2 ASN B 107 LEU B 114 1 8 HELIX 12 AB3 ASP B 120 ASN B 126 1 7 SHEET 1 AA1 5 THR A 32 PHE A 34 0 SHEET 2 AA1 5 LYS A 3 ALA A 7 1 N ILE A 4 O THR A 32 SHEET 3 AA1 5 ILE A 68 ILE A 72 1 O PHE A 70 N TYR A 5 SHEET 4 AA1 5 VAL A 96 PHE A 99 1 O MET A 97 N GLY A 71 SHEET 5 AA1 5 ALA A 116 PHE A 118 1 O PHE A 118 N LEU A 98 SHEET 1 AA2 5 THR B 32 PHE B 34 0 SHEET 2 AA2 5 LYS B 3 ALA B 7 1 N ILE B 4 O THR B 32 SHEET 3 AA2 5 ILE B 68 ILE B 72 1 O PHE B 70 N TYR B 5 SHEET 4 AA2 5 VAL B 96 PHE B 99 1 O MET B 97 N GLY B 71 SHEET 5 AA2 5 ALA B 116 PHE B 118 1 O PHE B 118 N LEU B 98 CISPEP 1 PRO A 42 GLU A 43 0 -7.58 CRYST1 107.547 107.547 61.244 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009298 0.005368 0.000000 0.00000 SCALE2 0.000000 0.010737 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016328 0.00000