HEADER TRANSFERASE 21-NOV-17 6F0Y TITLE RTT109 PEPTIDE BOUND TO ASF1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE CHAPERONE ASF1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANTI-SILENCING FUNCTION PROTEIN 1,YASF1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE ACETYLTRANSFERASE RTT109 C-TERMINUS; COMPND 8 CHAIN: B; COMPND 9 EC: 2.3.1.48; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 ATCC: 204508; SOURCE 8 GENE: ASF1, CIA1, YJL115W, J0755; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PETM11; SOURCE 13 MOL_ID: 2; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 16 ORGANISM_TAXID: 559292 KEYWDS HISTONE CHAPERONE, ACETYL TRANSFERASE, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR L.LERCHER,J.P.KIRKPATRICK,T.CARLOMAGNO REVDAT 7 15-MAY-24 6F0Y 1 REMARK REVDAT 6 08-MAY-19 6F0Y 1 REMARK REVDAT 5 04-APR-18 6F0Y 1 JRNL REVDAT 4 31-JAN-18 6F0Y 1 REMARK REVDAT 3 24-JAN-18 6F0Y 1 SOURCE REVDAT 2 17-JAN-18 6F0Y 1 JRNL REVDAT 1 27-DEC-17 6F0Y 0 JRNL AUTH L.LERCHER,N.DANILENKO,J.KIRKPATRICK,T.CARLOMAGNO JRNL TITL STRUCTURAL CHARACTERIZATION OF THE ASF1-RTT109 INTERACTION JRNL TITL 2 AND ITS ROLE IN HISTONE ACETYLATION. JRNL REF NUCLEIC ACIDS RES. V. 46 2279 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29300933 JRNL DOI 10.1093/NAR/GKX1283 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.21, CNS 1.21, CNS 1.21 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, DELANO, GROS, GROSSE REMARK 3 -KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, READ, REMARK 3 RICE, SIMONSON, WARREN (CNS), BRUNGER, ADAMS, REMARK 3 CLORE, DELANO, GROS, GROSSE-KUNSTLEVE, JIANG, REMARK 3 KUSZEWSKI, NILGES, PANNU, READ, RICE, SIMONSON, REMARK 3 WARREN (CNS), BRUNGER, ADAMS, CLORE, DELANO, GROS, REMARK 3 GROSSE-KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, REMARK 3 READ, RICE, SIMONSON, WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1200007564. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298 REMARK 210 PH : 6.2; 6.2 REMARK 210 IONIC STRENGTH : 150; 150 REMARK 210 PRESSURE : AMBIENT PA; AMBIENT PA REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 HISTONE CHAPERONE ASF1, 3 MM REMARK 210 HISTONE ACETYLTRANSFERASE RTT109 REMARK 210 C-TERMINUS, 90% H2O/10% D2O; 0.5 REMARK 210 MM [U-99% 13C; U-99% 15N; U-99% REMARK 210 2D] HISTONE CHAPERONE ASF1, 0.15 REMARK 210 MM HISTONE ACETYLTRANSFERASE REMARK 210 RTT109 C-TERMINUS, 90% H2O/10% REMARK 210 D2O; 0.15 MM [U-99% 13C; U-99% REMARK 210 15N] HISTONE CHAPERONE ASF1, 0.5 REMARK 210 MM HISTONE ACETYLTRANSFERASE REMARK 210 RTT109 C-TERMINUS, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HCCH-TOCSY; REMARK 210 (HB)CB(CGCD)HD; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 3D 13C,15N REMARK 210 FILTERED 1H-13C NOESY; 2D 1H-15N REMARK 210 HSQC; 2D 1H-15N TROSY-HSQC; 2D REMARK 210 1H-1H TOCSY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.2, NMRPIPE, CCPNMR REMARK 210 ANALYSIS 2.4.2, ARIA 2.3, PALES, REMARK 210 TALOS-N REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 104 OE1 GLU A 156 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 14 117.01 -167.71 REMARK 500 1 SER A 47 -76.20 69.83 REMARK 500 1 SER A 48 -62.59 -142.61 REMARK 500 1 SER A 50 81.90 66.69 REMARK 500 1 HIS A 53 108.12 67.37 REMARK 500 1 ASP A 58 148.90 -175.46 REMARK 500 1 GLN A 131 75.89 -104.92 REMARK 500 1 ASP A 154 -59.63 64.52 REMARK 500 1 ASN A 155 31.77 -88.85 REMARK 500 1 LEU B 424 -173.76 61.06 REMARK 500 1 LYS B 429 -100.03 59.50 REMARK 500 2 VAL A 11 98.40 -68.50 REMARK 500 2 SER A 47 -71.32 71.55 REMARK 500 2 SER A 48 -67.80 -142.16 REMARK 500 2 SER A 50 101.68 68.27 REMARK 500 2 ASP A 54 131.33 69.43 REMARK 500 2 GLN A 131 76.62 -103.64 REMARK 500 2 TRP A 153 -168.10 -76.69 REMARK 500 2 ASP A 160 51.47 -97.31 REMARK 500 2 LYS B 425 94.86 61.49 REMARK 500 3 ALA A -1 82.64 54.08 REMARK 500 3 ASN A 14 110.43 -167.44 REMARK 500 3 HIS A 36 -165.52 -108.71 REMARK 500 3 SER A 47 -64.99 72.04 REMARK 500 3 SER A 48 -54.63 -166.56 REMARK 500 3 SER A 50 97.33 65.54 REMARK 500 3 ASP A 54 141.62 68.48 REMARK 500 3 VAL A 90 56.67 -118.93 REMARK 500 3 GLN A 131 77.89 -103.55 REMARK 500 3 ASP A 154 30.34 31.98 REMARK 500 3 ASN A 155 13.85 -151.04 REMARK 500 3 ASN A 157 -76.47 -173.84 REMARK 500 3 PRO A 167 81.25 -66.41 REMARK 500 3 ILE B 421 -150.43 55.67 REMARK 500 3 ALA B 430 37.00 -160.04 REMARK 500 4 VAL A 11 98.49 -67.73 REMARK 500 4 ASN A 14 110.01 -165.61 REMARK 500 4 SER A 47 -86.04 65.20 REMARK 500 4 SER A 48 -20.42 -152.72 REMARK 500 4 SER A 50 74.60 53.25 REMARK 500 4 ASP A 54 104.57 65.10 REMARK 500 4 PRO A 85 161.17 -49.00 REMARK 500 4 VAL A 90 58.63 -96.72 REMARK 500 4 GLN A 131 77.66 -105.36 REMARK 500 4 ASP A 154 -62.47 64.33 REMARK 500 4 LEU A 161 -2.62 66.23 REMARK 500 4 ALA B 430 39.43 -84.61 REMARK 500 5 ALA A -1 78.83 -107.15 REMARK 500 5 ASN A 14 108.45 -163.69 REMARK 500 5 SER A 47 -102.47 47.93 REMARK 500 REMARK 500 THIS ENTRY HAS 119 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34201 RELATED DB: BMRB REMARK 900 RTT109 PEPTIDE BOUND TO ASF1 DBREF 6F0Y A 2 169 UNP P32447 ASF1_YEAST 2 169 DBREF 6F0Y B 419 433 PDB 6F0Y 6F0Y 419 433 SEQADV 6F0Y GLY A -2 UNP P32447 EXPRESSION TAG SEQADV 6F0Y ALA A -1 UNP P32447 EXPRESSION TAG SEQADV 6F0Y MET A 0 UNP P32447 EXPRESSION TAG SEQADV 6F0Y GLY A 1 UNP P32447 EXPRESSION TAG SEQRES 1 A 172 GLY ALA MET GLY SER ILE VAL SER LEU LEU GLY ILE LYS SEQRES 2 A 172 VAL LEU ASN ASN PRO ALA LYS PHE THR ASP PRO TYR GLU SEQRES 3 A 172 PHE GLU ILE THR PHE GLU CYS LEU GLU SER LEU LYS HIS SEQRES 4 A 172 ASP LEU GLU TRP LYS LEU THR TYR VAL GLY SER SER ARG SEQRES 5 A 172 SER LEU ASP HIS ASP GLN GLU LEU ASP SER ILE LEU VAL SEQRES 6 A 172 GLY PRO VAL PRO VAL GLY VAL ASN LYS PHE VAL PHE SER SEQRES 7 A 172 ALA ASP PRO PRO SER ALA GLU LEU ILE PRO ALA SER GLU SEQRES 8 A 172 LEU VAL SER VAL THR VAL ILE LEU LEU SER CYS SER TYR SEQRES 9 A 172 ASP GLY ARG GLU PHE VAL ARG VAL GLY TYR TYR VAL ASN SEQRES 10 A 172 ASN GLU TYR ASP GLU GLU GLU LEU ARG GLU ASN PRO PRO SEQRES 11 A 172 ALA LYS VAL GLN VAL ASP HIS ILE VAL ARG ASN ILE LEU SEQRES 12 A 172 ALA GLU LYS PRO ARG VAL THR ARG PHE ASN ILE VAL TRP SEQRES 13 A 172 ASP ASN GLU ASN GLU GLY ASP LEU TYR PRO PRO GLU GLN SEQRES 14 A 172 PRO GLY VAL SEQRES 1 B 15 LEU ALA ILE THR MET LEU LYS PRO ARG LYS LYS ALA LYS SEQRES 2 B 15 ALA LEU HELIX 1 AA1 PRO A 85 VAL A 90 1 6 HELIX 2 AA2 GLU A 119 ASN A 125 1 7 HELIX 3 AA3 GLN A 131 ASP A 133 5 3 SHEET 1 AA1 3 VAL A 4 VAL A 11 0 SHEET 2 AA1 3 TYR A 22 CYS A 30 -1 O GLU A 25 N LYS A 10 SHEET 3 AA1 3 GLY A 68 ALA A 76 -1 O PHE A 74 N PHE A 24 SHEET 1 AA2 6 ALA A 16 LYS A 17 0 SHEET 2 AA2 6 ILE A 135 ILE A 139 -1 O ARG A 137 N ALA A 16 SHEET 3 AA2 6 ARG A 104 TYR A 117 -1 N GLU A 116 O VAL A 136 SHEET 4 AA2 6 THR A 93 TYR A 101 -1 N TYR A 101 O ARG A 104 SHEET 5 AA2 6 LEU A 38 VAL A 45 -1 N VAL A 45 O VAL A 94 SHEET 6 AA2 6 GLN A 55 VAL A 62 -1 O ILE A 60 N TRP A 40 SHEET 1 AA3 4 ALA A 16 LYS A 17 0 SHEET 2 AA3 4 ILE A 135 ILE A 139 -1 O ARG A 137 N ALA A 16 SHEET 3 AA3 4 ARG A 104 TYR A 117 -1 N GLU A 116 O VAL A 136 SHEET 4 AA3 4 ARG A 145 ARG A 148 -1 O ARG A 145 N GLY A 110 CISPEP 1 ASN A 14 PRO A 15 1 -3.64 CISPEP 2 GLY A 63 PRO A 64 1 -5.04 CISPEP 3 ASN A 14 PRO A 15 2 -0.48 CISPEP 4 GLY A 63 PRO A 64 2 -5.35 CISPEP 5 ASN A 14 PRO A 15 3 -0.52 CISPEP 6 GLY A 63 PRO A 64 3 -4.68 CISPEP 7 ASN A 14 PRO A 15 4 -1.92 CISPEP 8 GLY A 63 PRO A 64 4 -6.18 CISPEP 9 ASN A 14 PRO A 15 5 -3.97 CISPEP 10 GLY A 63 PRO A 64 5 -5.11 CISPEP 11 ASN A 14 PRO A 15 6 -5.03 CISPEP 12 GLY A 63 PRO A 64 6 -5.10 CISPEP 13 ASN A 14 PRO A 15 7 -2.99 CISPEP 14 GLY A 63 PRO A 64 7 -5.49 CISPEP 15 ASN A 14 PRO A 15 8 -2.25 CISPEP 16 GLY A 63 PRO A 64 8 -6.02 CISPEP 17 ASN A 14 PRO A 15 9 -1.04 CISPEP 18 GLY A 63 PRO A 64 9 -4.48 CISPEP 19 ASN A 14 PRO A 15 10 -4.87 CISPEP 20 GLY A 63 PRO A 64 10 -4.21 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1