data_6F5B # _entry.id 6F5B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6F5B pdb_00006f5b 10.2210/pdb6f5b/pdb WWPDB D_1200007626 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-10 2 'Structure model' 1 1 2018-10-24 3 'Structure model' 1 2 2018-12-26 4 'Structure model' 1 3 2019-10-16 5 'Structure model' 1 4 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Author supporting evidence' 6 4 'Structure model' 'Data collection' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' pdbx_audit_support 4 4 'Structure model' reflns 5 4 'Structure model' reflns_shell 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_initial_refinement_model 10 5 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 4 'Structure model' '_pdbx_audit_support.funding_organization' 14 4 'Structure model' '_reflns.pdbx_CC_half' 15 4 'Structure model' '_reflns_shell.Rmerge_I_obs' 16 4 'Structure model' '_reflns_shell.pdbx_CC_half' 17 5 'Structure model' '_database_2.pdbx_DOI' 18 5 'Structure model' '_database_2.pdbx_database_accession' 19 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 20 5 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 21 5 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 22 5 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 23 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 24 5 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 25 5 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 26 5 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6F5B _pdbx_database_status.recvd_initial_deposition_date 2017-12-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Obaji, E.' 1 ? 'Haikarainen, T.' 2 ? 'Lehtio, L.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 12154 _citation.page_last 12165 _citation.title 'Structural basis for DNA break recognition by ARTD2/PARP2.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gky927 _citation.pdbx_database_id_PubMed 30321391 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Obaji, E.' 1 ? primary 'Haikarainen, T.' 2 ? primary 'Lehtio, L.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Poly [ADP-ribose] polymerase 2' 15275.181 2 2.4.2.30 ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*CP*CP*TP*AP*TP*AP*GP*GP*C)-3') ; 3045.005 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;hPARP-2,ADP-ribosyltransferase diphtheria toxin-like 2,ARTD2,NAD(+) ADP-ribosyltransferase 2,ADPRT-2,Poly[ADP-ribose] synthase 2,pADPRT-2 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMGKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSG NLNKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEET ; ;SMGKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSG NLNKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEET ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DT)(DA)(DT)(DA)(DG)(DG)(DC)' GCCTATAGGC C,D,E,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLY n 1 4 LYS n 1 5 ALA n 1 6 PRO n 1 7 VAL n 1 8 ASP n 1 9 PRO n 1 10 GLU n 1 11 CYS n 1 12 THR n 1 13 ALA n 1 14 LYS n 1 15 VAL n 1 16 GLY n 1 17 LYS n 1 18 ALA n 1 19 HIS n 1 20 VAL n 1 21 TYR n 1 22 CYS n 1 23 GLU n 1 24 GLY n 1 25 ASN n 1 26 ASP n 1 27 VAL n 1 28 TYR n 1 29 ASP n 1 30 VAL n 1 31 MET n 1 32 LEU n 1 33 ASN n 1 34 GLN n 1 35 THR n 1 36 ASN n 1 37 LEU n 1 38 GLN n 1 39 PHE n 1 40 ASN n 1 41 ASN n 1 42 ASN n 1 43 LYS n 1 44 TYR n 1 45 TYR n 1 46 LEU n 1 47 ILE n 1 48 GLN n 1 49 LEU n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 ASP n 1 54 ALA n 1 55 GLN n 1 56 ARG n 1 57 ASN n 1 58 PHE n 1 59 SER n 1 60 VAL n 1 61 TRP n 1 62 MET n 1 63 ARG n 1 64 TRP n 1 65 GLY n 1 66 ARG n 1 67 VAL n 1 68 GLY n 1 69 LYS n 1 70 MET n 1 71 GLY n 1 72 GLN n 1 73 HIS n 1 74 SER n 1 75 LEU n 1 76 VAL n 1 77 ALA n 1 78 CYS n 1 79 SER n 1 80 GLY n 1 81 ASN n 1 82 LEU n 1 83 ASN n 1 84 LYS n 1 85 ALA n 1 86 LYS n 1 87 GLU n 1 88 ILE n 1 89 PHE n 1 90 GLN n 1 91 LYS n 1 92 LYS n 1 93 PHE n 1 94 LEU n 1 95 ASP n 1 96 LYS n 1 97 THR n 1 98 LYS n 1 99 ASN n 1 100 ASN n 1 101 TRP n 1 102 GLU n 1 103 ASP n 1 104 ARG n 1 105 GLU n 1 106 LYS n 1 107 PHE n 1 108 GLU n 1 109 LYS n 1 110 VAL n 1 111 PRO n 1 112 GLY n 1 113 LYS n 1 114 TYR n 1 115 ASP n 1 116 MET n 1 117 LEU n 1 118 GLN n 1 119 MET n 1 120 ASP n 1 121 TYR n 1 122 ALA n 1 123 THR n 1 124 ASN n 1 125 THR n 1 126 GLN n 1 127 ASP n 1 128 GLU n 1 129 GLU n 1 130 GLU n 1 131 THR n 2 1 DG n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DG n 2 9 DG n 2 10 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 131 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PARP2, ADPRT2, ADPRTL2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 88 ? ? ? A . n A 1 2 MET 2 89 ? ? ? A . n A 1 3 GLY 3 90 ? ? ? A . n A 1 4 LYS 4 91 ? ? ? A . n A 1 5 ALA 5 92 92 ALA ALA A . n A 1 6 PRO 6 93 93 PRO PRO A . n A 1 7 VAL 7 94 94 VAL VAL A . n A 1 8 ASP 8 95 95 ASP ASP A . n A 1 9 PRO 9 96 96 PRO PRO A . n A 1 10 GLU 10 97 97 GLU GLU A . n A 1 11 CYS 11 98 98 CYS CYS A . n A 1 12 THR 12 99 99 THR THR A . n A 1 13 ALA 13 100 100 ALA ALA A . n A 1 14 LYS 14 101 101 LYS LYS A . n A 1 15 VAL 15 102 102 VAL VAL A . n A 1 16 GLY 16 103 103 GLY GLY A . n A 1 17 LYS 17 104 104 LYS LYS A . n A 1 18 ALA 18 105 105 ALA ALA A . n A 1 19 HIS 19 106 106 HIS HIS A . n A 1 20 VAL 20 107 107 VAL VAL A . n A 1 21 TYR 21 108 108 TYR TYR A . n A 1 22 CYS 22 109 109 CYS CYS A . n A 1 23 GLU 23 110 110 GLU GLU A . n A 1 24 GLY 24 111 111 GLY GLY A . n A 1 25 ASN 25 112 112 ASN ASN A . n A 1 26 ASP 26 113 113 ASP ASP A . n A 1 27 VAL 27 114 114 VAL VAL A . n A 1 28 TYR 28 115 115 TYR TYR A . n A 1 29 ASP 29 116 116 ASP ASP A . n A 1 30 VAL 30 117 117 VAL VAL A . n A 1 31 MET 31 118 118 MET MET A . n A 1 32 LEU 32 119 119 LEU LEU A . n A 1 33 ASN 33 120 120 ASN ASN A . n A 1 34 GLN 34 121 121 GLN GLN A . n A 1 35 THR 35 122 122 THR THR A . n A 1 36 ASN 36 123 123 ASN ASN A . n A 1 37 LEU 37 124 124 LEU LEU A . n A 1 38 GLN 38 125 125 GLN GLN A . n A 1 39 PHE 39 126 126 PHE PHE A . n A 1 40 ASN 40 127 127 ASN ASN A . n A 1 41 ASN 41 128 128 ASN ASN A . n A 1 42 ASN 42 129 129 ASN ASN A . n A 1 43 LYS 43 130 130 LYS LYS A . n A 1 44 TYR 44 131 131 TYR TYR A . n A 1 45 TYR 45 132 132 TYR TYR A . n A 1 46 LEU 46 133 133 LEU LEU A . n A 1 47 ILE 47 134 134 ILE ILE A . n A 1 48 GLN 48 135 135 GLN GLN A . n A 1 49 LEU 49 136 136 LEU LEU A . n A 1 50 LEU 50 137 137 LEU LEU A . n A 1 51 GLU 51 138 138 GLU GLU A . n A 1 52 ASP 52 139 139 ASP ASP A . n A 1 53 ASP 53 140 140 ASP ASP A . n A 1 54 ALA 54 141 141 ALA ALA A . n A 1 55 GLN 55 142 142 GLN GLN A . n A 1 56 ARG 56 143 143 ARG ARG A . n A 1 57 ASN 57 144 144 ASN ASN A . n A 1 58 PHE 58 145 145 PHE PHE A . n A 1 59 SER 59 146 146 SER SER A . n A 1 60 VAL 60 147 147 VAL VAL A . n A 1 61 TRP 61 148 148 TRP TRP A . n A 1 62 MET 62 149 149 MET MET A . n A 1 63 ARG 63 150 150 ARG ARG A . n A 1 64 TRP 64 151 151 TRP TRP A . n A 1 65 GLY 65 152 152 GLY GLY A . n A 1 66 ARG 66 153 153 ARG ARG A . n A 1 67 VAL 67 154 154 VAL VAL A . n A 1 68 GLY 68 155 155 GLY GLY A . n A 1 69 LYS 69 156 156 LYS LYS A . n A 1 70 MET 70 157 157 MET MET A . n A 1 71 GLY 71 158 158 GLY GLY A . n A 1 72 GLN 72 159 159 GLN GLN A . n A 1 73 HIS 73 160 160 HIS HIS A . n A 1 74 SER 74 161 161 SER SER A . n A 1 75 LEU 75 162 162 LEU LEU A . n A 1 76 VAL 76 163 163 VAL VAL A . n A 1 77 ALA 77 164 164 ALA ALA A . n A 1 78 CYS 78 165 165 CYS CYS A . n A 1 79 SER 79 166 166 SER SER A . n A 1 80 GLY 80 167 167 GLY GLY A . n A 1 81 ASN 81 168 168 ASN ASN A . n A 1 82 LEU 82 169 169 LEU LEU A . n A 1 83 ASN 83 170 170 ASN ASN A . n A 1 84 LYS 84 171 171 LYS LYS A . n A 1 85 ALA 85 172 172 ALA ALA A . n A 1 86 LYS 86 173 173 LYS LYS A . n A 1 87 GLU 87 174 174 GLU GLU A . n A 1 88 ILE 88 175 175 ILE ILE A . n A 1 89 PHE 89 176 176 PHE PHE A . n A 1 90 GLN 90 177 177 GLN GLN A . n A 1 91 LYS 91 178 178 LYS LYS A . n A 1 92 LYS 92 179 179 LYS LYS A . n A 1 93 PHE 93 180 180 PHE PHE A . n A 1 94 LEU 94 181 181 LEU LEU A . n A 1 95 ASP 95 182 182 ASP ASP A . n A 1 96 LYS 96 183 183 LYS LYS A . n A 1 97 THR 97 184 184 THR THR A . n A 1 98 LYS 98 185 185 LYS LYS A . n A 1 99 ASN 99 186 186 ASN ASN A . n A 1 100 ASN 100 187 187 ASN ASN A . n A 1 101 TRP 101 188 188 TRP TRP A . n A 1 102 GLU 102 189 189 GLU GLU A . n A 1 103 ASP 103 190 190 ASP ASP A . n A 1 104 ARG 104 191 191 ARG ARG A . n A 1 105 GLU 105 192 192 GLU GLU A . n A 1 106 LYS 106 193 193 LYS LYS A . n A 1 107 PHE 107 194 194 PHE PHE A . n A 1 108 GLU 108 195 195 GLU GLU A . n A 1 109 LYS 109 196 196 LYS LYS A . n A 1 110 VAL 110 197 197 VAL VAL A . n A 1 111 PRO 111 198 198 PRO PRO A . n A 1 112 GLY 112 199 199 GLY GLY A . n A 1 113 LYS 113 200 200 LYS LYS A . n A 1 114 TYR 114 201 201 TYR TYR A . n A 1 115 ASP 115 202 202 ASP ASP A . n A 1 116 MET 116 203 203 MET MET A . n A 1 117 LEU 117 204 204 LEU LEU A . n A 1 118 GLN 118 205 205 GLN GLN A . n A 1 119 MET 119 206 ? ? ? A . n A 1 120 ASP 120 207 ? ? ? A . n A 1 121 TYR 121 208 ? ? ? A . n A 1 122 ALA 122 209 ? ? ? A . n A 1 123 THR 123 210 ? ? ? A . n A 1 124 ASN 124 211 ? ? ? A . n A 1 125 THR 125 212 ? ? ? A . n A 1 126 GLN 126 213 ? ? ? A . n A 1 127 ASP 127 214 ? ? ? A . n A 1 128 GLU 128 215 ? ? ? A . n A 1 129 GLU 129 216 ? ? ? A . n A 1 130 GLU 130 217 ? ? ? A . n A 1 131 THR 131 218 ? ? ? A . n B 1 1 SER 1 88 ? ? ? B . n B 1 2 MET 2 89 ? ? ? B . n B 1 3 GLY 3 90 ? ? ? B . n B 1 4 LYS 4 91 ? ? ? B . n B 1 5 ALA 5 92 92 ALA ALA B . n B 1 6 PRO 6 93 93 PRO PRO B . n B 1 7 VAL 7 94 94 VAL VAL B . n B 1 8 ASP 8 95 95 ASP ASP B . n B 1 9 PRO 9 96 96 PRO PRO B . n B 1 10 GLU 10 97 97 GLU GLU B . n B 1 11 CYS 11 98 98 CYS CYS B . n B 1 12 THR 12 99 99 THR THR B . n B 1 13 ALA 13 100 100 ALA ALA B . n B 1 14 LYS 14 101 101 LYS LYS B . n B 1 15 VAL 15 102 102 VAL VAL B . n B 1 16 GLY 16 103 103 GLY GLY B . n B 1 17 LYS 17 104 104 LYS LYS B . n B 1 18 ALA 18 105 105 ALA ALA B . n B 1 19 HIS 19 106 106 HIS HIS B . n B 1 20 VAL 20 107 107 VAL VAL B . n B 1 21 TYR 21 108 108 TYR TYR B . n B 1 22 CYS 22 109 109 CYS CYS B . n B 1 23 GLU 23 110 110 GLU GLU B . n B 1 24 GLY 24 111 111 GLY GLY B . n B 1 25 ASN 25 112 112 ASN ASN B . n B 1 26 ASP 26 113 113 ASP ASP B . n B 1 27 VAL 27 114 114 VAL VAL B . n B 1 28 TYR 28 115 115 TYR TYR B . n B 1 29 ASP 29 116 116 ASP ASP B . n B 1 30 VAL 30 117 117 VAL VAL B . n B 1 31 MET 31 118 118 MET MET B . n B 1 32 LEU 32 119 119 LEU LEU B . n B 1 33 ASN 33 120 120 ASN ASN B . n B 1 34 GLN 34 121 121 GLN GLN B . n B 1 35 THR 35 122 122 THR THR B . n B 1 36 ASN 36 123 123 ASN ASN B . n B 1 37 LEU 37 124 124 LEU LEU B . n B 1 38 GLN 38 125 125 GLN GLN B . n B 1 39 PHE 39 126 126 PHE PHE B . n B 1 40 ASN 40 127 127 ASN ASN B . n B 1 41 ASN 41 128 128 ASN ASN B . n B 1 42 ASN 42 129 129 ASN ASN B . n B 1 43 LYS 43 130 130 LYS LYS B . n B 1 44 TYR 44 131 131 TYR TYR B . n B 1 45 TYR 45 132 132 TYR TYR B . n B 1 46 LEU 46 133 133 LEU LEU B . n B 1 47 ILE 47 134 134 ILE ILE B . n B 1 48 GLN 48 135 135 GLN GLN B . n B 1 49 LEU 49 136 136 LEU LEU B . n B 1 50 LEU 50 137 137 LEU LEU B . n B 1 51 GLU 51 138 138 GLU GLU B . n B 1 52 ASP 52 139 139 ASP ASP B . n B 1 53 ASP 53 140 140 ASP ASP B . n B 1 54 ALA 54 141 141 ALA ALA B . n B 1 55 GLN 55 142 142 GLN GLN B . n B 1 56 ARG 56 143 143 ARG ARG B . n B 1 57 ASN 57 144 144 ASN ASN B . n B 1 58 PHE 58 145 145 PHE PHE B . n B 1 59 SER 59 146 146 SER SER B . n B 1 60 VAL 60 147 147 VAL VAL B . n B 1 61 TRP 61 148 148 TRP TRP B . n B 1 62 MET 62 149 149 MET MET B . n B 1 63 ARG 63 150 150 ARG ARG B . n B 1 64 TRP 64 151 151 TRP TRP B . n B 1 65 GLY 65 152 152 GLY GLY B . n B 1 66 ARG 66 153 153 ARG ARG B . n B 1 67 VAL 67 154 154 VAL VAL B . n B 1 68 GLY 68 155 155 GLY GLY B . n B 1 69 LYS 69 156 156 LYS LYS B . n B 1 70 MET 70 157 157 MET MET B . n B 1 71 GLY 71 158 158 GLY GLY B . n B 1 72 GLN 72 159 159 GLN GLN B . n B 1 73 HIS 73 160 160 HIS HIS B . n B 1 74 SER 74 161 161 SER SER B . n B 1 75 LEU 75 162 162 LEU LEU B . n B 1 76 VAL 76 163 163 VAL VAL B . n B 1 77 ALA 77 164 164 ALA ALA B . n B 1 78 CYS 78 165 165 CYS CYS B . n B 1 79 SER 79 166 166 SER SER B . n B 1 80 GLY 80 167 167 GLY GLY B . n B 1 81 ASN 81 168 168 ASN ASN B . n B 1 82 LEU 82 169 169 LEU LEU B . n B 1 83 ASN 83 170 170 ASN ASN B . n B 1 84 LYS 84 171 171 LYS LYS B . n B 1 85 ALA 85 172 172 ALA ALA B . n B 1 86 LYS 86 173 173 LYS LYS B . n B 1 87 GLU 87 174 174 GLU GLU B . n B 1 88 ILE 88 175 175 ILE ILE B . n B 1 89 PHE 89 176 176 PHE PHE B . n B 1 90 GLN 90 177 177 GLN GLN B . n B 1 91 LYS 91 178 178 LYS LYS B . n B 1 92 LYS 92 179 179 LYS LYS B . n B 1 93 PHE 93 180 180 PHE PHE B . n B 1 94 LEU 94 181 181 LEU LEU B . n B 1 95 ASP 95 182 182 ASP ASP B . n B 1 96 LYS 96 183 183 LYS LYS B . n B 1 97 THR 97 184 184 THR THR B . n B 1 98 LYS 98 185 185 LYS LYS B . n B 1 99 ASN 99 186 186 ASN ASN B . n B 1 100 ASN 100 187 187 ASN ASN B . n B 1 101 TRP 101 188 188 TRP TRP B . n B 1 102 GLU 102 189 189 GLU GLU B . n B 1 103 ASP 103 190 190 ASP ASP B . n B 1 104 ARG 104 191 191 ARG ARG B . n B 1 105 GLU 105 192 192 GLU GLU B . n B 1 106 LYS 106 193 193 LYS LYS B . n B 1 107 PHE 107 194 194 PHE PHE B . n B 1 108 GLU 108 195 195 GLU GLU B . n B 1 109 LYS 109 196 196 LYS LYS B . n B 1 110 VAL 110 197 197 VAL VAL B . n B 1 111 PRO 111 198 198 PRO PRO B . n B 1 112 GLY 112 199 199 GLY GLY B . n B 1 113 LYS 113 200 200 LYS LYS B . n B 1 114 TYR 114 201 201 TYR TYR B . n B 1 115 ASP 115 202 202 ASP ASP B . n B 1 116 MET 116 203 203 MET MET B . n B 1 117 LEU 117 204 204 LEU LEU B . n B 1 118 GLN 118 205 ? ? ? B . n B 1 119 MET 119 206 ? ? ? B . n B 1 120 ASP 120 207 ? ? ? B . n B 1 121 TYR 121 208 ? ? ? B . n B 1 122 ALA 122 209 ? ? ? B . n B 1 123 THR 123 210 ? ? ? B . n B 1 124 ASN 124 211 ? ? ? B . n B 1 125 THR 125 212 ? ? ? B . n B 1 126 GLN 126 213 ? ? ? B . n B 1 127 ASP 127 214 ? ? ? B . n B 1 128 GLU 128 215 ? ? ? B . n B 1 129 GLU 129 216 ? ? ? B . n B 1 130 GLU 130 217 ? ? ? B . n B 1 131 THR 131 218 ? ? ? B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DG 8 8 8 DG DG C . n C 2 9 DG 9 9 9 DG DG C . n C 2 10 DC 10 10 10 DC DC C . n D 2 1 DG 1 1 1 DG DG D . n D 2 2 DC 2 2 2 DC DC D . n D 2 3 DC 3 3 3 DC DC D . n D 2 4 DT 4 4 4 DT DT D . n D 2 5 DA 5 5 5 DA DA D . n D 2 6 DT 6 6 6 DT DT D . n D 2 7 DA 7 7 7 DA DA D . n D 2 8 DG 8 8 8 DG DG D . n D 2 9 DG 9 9 9 DG DG D . n D 2 10 DC 10 10 10 DC DC D . n E 2 1 DG 1 1 1 DG DG E . n E 2 2 DC 2 2 2 DC DC E . n E 2 3 DC 3 3 3 DC DC E . n E 2 4 DT 4 4 4 DT DT E . n E 2 5 DA 5 5 5 DA DA E . n E 2 6 DT 6 6 6 DT DT E . n E 2 7 DA 7 7 7 DA DA E . n E 2 8 DG 8 8 8 DG DG E . n E 2 9 DG 9 9 9 DG DG E . n E 2 10 DC 10 10 10 DC DC E . n F 2 1 DG 1 1 1 DG DG F . n F 2 2 DC 2 2 2 DC DC F . n F 2 3 DC 3 3 3 DC DC F . n F 2 4 DT 4 4 4 DT DT F . n F 2 5 DA 5 5 5 DA DA F . n F 2 6 DT 6 6 6 DT DT F . n F 2 7 DA 7 7 7 DA DA F . n F 2 8 DG 8 8 8 DG DG F . n F 2 9 DG 9 9 9 DG DG F . n F 2 10 DC 10 10 10 DC DC F . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 191 ? CG ? A ARG 104 CG 2 1 Y 1 A ARG 191 ? CD ? A ARG 104 CD 3 1 Y 1 A ARG 191 ? NE ? A ARG 104 NE 4 1 Y 1 A ARG 191 ? CZ ? A ARG 104 CZ 5 1 Y 1 A ARG 191 ? NH1 ? A ARG 104 NH1 6 1 Y 1 A ARG 191 ? NH2 ? A ARG 104 NH2 7 1 Y 1 B ARG 191 ? CG ? B ARG 104 CG 8 1 Y 1 B ARG 191 ? CD ? B ARG 104 CD 9 1 Y 1 B ARG 191 ? NE ? B ARG 104 NE 10 1 Y 1 B ARG 191 ? CZ ? B ARG 104 CZ 11 1 Y 1 B ARG 191 ? NH1 ? B ARG 104 NH1 12 1 Y 1 B ARG 191 ? NH2 ? B ARG 104 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.entry_id 6F5B _cell.length_a 63.160 _cell.length_b 84.360 _cell.length_c 95.960 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F5B _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6F5B _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;12 % v/v Polypropylene glycol 400 0.1 M Na-acetate 3 % 2 propanol ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-21 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6F5B _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13124 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.77 _reflns.pdbx_Rmerge_I_obs 0.01 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.36 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.0212 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.93 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.797 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.4 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6F5B _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12468 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.75 _refine.ls_R_factor_obs 0.21127 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20811 _refine.ls_R_factor_R_free 0.27392 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 657 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 83.666 _refine.aniso_B[1][1] 1.65 _refine.aniso_B[2][2] -1.22 _refine.aniso_B[3][3] -0.43 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PARP2 homology model' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.728 _refine.pdbx_overall_ESU_R_Free 0.362 _refine.overall_SU_ML 0.313 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 17.400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1849 _refine_hist.pdbx_number_atoms_nucleic_acid 824 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2673 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.017 ? 2809 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2146 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.600 1.667 ? 3958 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.201 3.000 ? 5031 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.760 5.000 ? 225 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.643 25.842 ? 101 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.227 15.000 ? 348 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.767 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.089 0.200 ? 379 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 2589 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 585 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 6.493 8.291 ? 906 'X-RAY DIFFRACTION' ? r_mcbond_other 6.494 8.289 ? 905 'X-RAY DIFFRACTION' ? r_mcangle_it 9.822 12.429 ? 1129 'X-RAY DIFFRACTION' ? r_mcangle_other 9.818 12.433 ? 1130 'X-RAY DIFFRACTION' ? r_scbond_it 7.343 8.789 ? 1903 'X-RAY DIFFRACTION' ? r_scbond_other 7.341 8.789 ? 1902 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 10.974 13.101 ? 2829 'X-RAY DIFFRACTION' ? r_long_range_B_refined 13.730 87.844 ? 3354 'X-RAY DIFFRACTION' ? r_long_range_B_other 13.728 87.837 ? 3355 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 1 ? 0.13 0.05 ? ? A 6744 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 2 1 2 ? 0.13 0.05 ? ? B 6744 'interatomic distance' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.872 _refine_ls_shell.number_reflns_R_work 904 _refine_ls_shell.R_factor_R_work 0.428 _refine_ls_shell.percent_reflns_obs 99.79 _refine_ls_shell.R_factor_R_free 0.437 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A ALA 5 . A MET 116 . A ALA 92 A MET 203 0 ? 1 2 0 B ALA 5 . B MET 116 . B ALA 92 B MET 203 0 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 6F5B _struct.title ;Structure of ARTD2/PARP2 WGR domain bound to double stranded DNA with 5'phosphate ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6F5B _struct_keywords.text 'ADP-ribosylation, DNA repair, DNA end joining, ARTD2, phosphorylated DNA, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PARP2_HUMAN Q9UGN5 ? 1 ;GKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNL NKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEET ; 90 2 PDB 6F5B 6F5B ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6F5B A 3 ? 131 ? Q9UGN5 90 ? 218 ? 90 218 2 1 6F5B B 3 ? 131 ? Q9UGN5 90 ? 218 ? 90 218 3 2 6F5B C 1 ? 10 ? 6F5B 1 ? 10 ? 1 10 4 2 6F5B D 1 ? 10 ? 6F5B 1 ? 10 ? 1 10 5 2 6F5B E 1 ? 10 ? 6F5B 1 ? 10 ? 1 10 6 2 6F5B F 1 ? 10 ? 6F5B 1 ? 10 ? 1 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6F5B SER A 1 ? UNP Q9UGN5 ? ? 'expression tag' 88 1 1 6F5B MET A 2 ? UNP Q9UGN5 ? ? 'expression tag' 89 2 2 6F5B SER B 1 ? UNP Q9UGN5 ? ? 'expression tag' 88 3 2 6F5B MET B 2 ? UNP Q9UGN5 ? ? 'expression tag' 89 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4870 ? 1 MORE -20 ? 1 'SSA (A^2)' 18650 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 81 ? LYS A 98 ? ASN A 168 LYS A 185 1 ? 18 HELX_P HELX_P2 AA2 ASN B 81 ? LYS B 98 ? ASN B 168 LYS B 185 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG 1 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG 1 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG 1 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 9 N1 ? ? C DC 2 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 9 O6 ? ? C DC 2 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 9 N2 ? ? C DC 2 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 8 N1 ? ? C DC 3 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 8 O6 ? ? C DC 3 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 8 N2 ? ? C DC 3 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 4 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 4 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 5 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 5 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 6 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 6 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 7 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 7 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 8 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 8 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 8 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 9 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 9 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 9 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 10 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 10 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 10 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 10 N3 ? ? E DG 1 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 10 O2 ? ? E DG 1 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 10 N4 ? ? E DG 1 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 9 N1 ? ? E DC 2 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 9 O6 ? ? E DC 2 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 9 N2 ? ? E DC 2 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 8 N1 ? ? E DC 3 F DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 8 O6 ? ? E DC 3 F DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 8 N2 ? ? E DC 3 F DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DT 4 N3 ? ? ? 1_555 F DA 7 N1 ? ? E DT 4 F DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DT 4 O4 ? ? ? 1_555 F DA 7 N6 ? ? E DT 4 F DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 6 N3 ? ? E DA 5 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 6 O4 ? ? E DA 5 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 5 N1 ? ? E DT 6 F DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 5 N6 ? ? E DT 6 F DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DA 7 N1 ? ? ? 1_555 F DT 4 N3 ? ? E DA 7 F DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DA 7 N6 ? ? ? 1_555 F DT 4 O4 ? ? E DA 7 F DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DG 8 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 8 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 8 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 8 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DG 8 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 8 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 9 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 9 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 9 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DC 10 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 10 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DC 10 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 10 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DC 10 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 10 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 2 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 18 ? VAL A 20 ? ALA A 105 VAL A 107 AA1 2 ASN A 41 ? ASP A 52 ? ASN A 128 ASP A 139 AA1 3 ASP A 29 ? ASN A 36 ? ASP A 116 ASN A 123 AA2 1 ALA A 18 ? VAL A 20 ? ALA A 105 VAL A 107 AA2 2 ASN A 41 ? ASP A 52 ? ASN A 128 ASP A 139 AA2 3 PHE A 58 ? ARG A 66 ? PHE A 145 ARG A 153 AA2 4 GLN A 72 ? SER A 79 ? GLN A 159 SER A 166 AA3 1 CYS A 22 ? GLU A 23 ? CYS A 109 GLU A 110 AA3 2 ASP A 26 ? VAL A 27 ? ASP A 113 VAL A 114 AA4 1 ALA B 18 ? VAL B 20 ? ALA B 105 VAL B 107 AA4 2 ASN B 41 ? ASP B 52 ? ASN B 128 ASP B 139 AA4 3 ASP B 29 ? ASN B 36 ? ASP B 116 ASN B 123 AA5 1 ALA B 18 ? VAL B 20 ? ALA B 105 VAL B 107 AA5 2 ASN B 41 ? ASP B 52 ? ASN B 128 ASP B 139 AA5 3 PHE B 58 ? ARG B 66 ? PHE B 145 ARG B 153 AA5 4 GLN B 72 ? ALA B 77 ? GLN B 159 ALA B 164 AA6 1 CYS B 22 ? GLU B 23 ? CYS B 109 GLU B 110 AA6 2 ASP B 26 ? VAL B 27 ? ASP B 113 VAL B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N HIS A 19 ? N HIS A 106 O GLU A 51 ? O GLU A 138 AA1 2 3 O ASN A 41 ? O ASN A 128 N ASN A 36 ? N ASN A 123 AA2 1 2 N HIS A 19 ? N HIS A 106 O GLU A 51 ? O GLU A 138 AA2 2 3 N LEU A 46 ? N LEU A 133 O ARG A 63 ? O ARG A 150 AA2 3 4 N PHE A 58 ? N PHE A 145 O SER A 79 ? O SER A 166 AA3 1 2 N GLU A 23 ? N GLU A 110 O ASP A 26 ? O ASP A 113 AA4 1 2 N HIS B 19 ? N HIS B 106 O GLU B 51 ? O GLU B 138 AA4 2 3 O ASN B 41 ? O ASN B 128 N ASN B 36 ? N ASN B 123 AA5 1 2 N HIS B 19 ? N HIS B 106 O GLU B 51 ? O GLU B 138 AA5 2 3 N LEU B 46 ? N LEU B 133 O ARG B 63 ? O ARG B 150 AA5 3 4 N VAL B 60 ? N VAL B 147 O VAL B 76 ? O VAL B 163 AA6 1 2 N GLU B 23 ? N GLU B 110 O ASP B 26 ? O ASP B 113 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P C DG 1 ? ? OP3 C DG 1 ? ? 1.481 1.607 -0.126 0.012 N 2 1 P D DG 1 ? ? OP3 D DG 1 ? ? 1.485 1.607 -0.122 0.012 N 3 1 P E DG 1 ? ? OP3 E DG 1 ? ? 1.487 1.607 -0.120 0.012 N 4 1 P F DG 1 ? ? OP3 F DG 1 ? ? 1.477 1.607 -0.130 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 150 ? ? CZ B ARG 150 ? ? NH1 B ARG 150 ? ? 117.14 120.30 -3.16 0.50 N 2 1 "O5'" C DC 3 ? ? P C DC 3 ? ? OP2 C DC 3 ? ? 99.35 105.70 -6.35 0.90 N 3 1 "O5'" C DT 4 ? ? P C DT 4 ? ? OP2 C DT 4 ? ? 97.43 105.70 -8.27 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 110 ? ? -152.31 86.54 2 1 ASN A 129 ? ? -154.06 87.73 3 1 SER A 166 ? ? 55.33 -135.64 4 1 ARG A 191 ? ? -157.54 45.37 5 1 LYS B 101 ? ? -140.59 -3.69 6 1 ASN B 123 ? ? -168.26 91.50 7 1 ASN B 129 ? ? -153.32 86.86 8 1 ASP B 190 ? ? -75.33 20.09 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ARG _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 191 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLU _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 192 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 144.84 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 88 ? A SER 1 2 1 Y 1 A MET 89 ? A MET 2 3 1 Y 1 A GLY 90 ? A GLY 3 4 1 Y 1 A LYS 91 ? A LYS 4 5 1 Y 1 A MET 206 ? A MET 119 6 1 Y 1 A ASP 207 ? A ASP 120 7 1 Y 1 A TYR 208 ? A TYR 121 8 1 Y 1 A ALA 209 ? A ALA 122 9 1 Y 1 A THR 210 ? A THR 123 10 1 Y 1 A ASN 211 ? A ASN 124 11 1 Y 1 A THR 212 ? A THR 125 12 1 Y 1 A GLN 213 ? A GLN 126 13 1 Y 1 A ASP 214 ? A ASP 127 14 1 Y 1 A GLU 215 ? A GLU 128 15 1 Y 1 A GLU 216 ? A GLU 129 16 1 Y 1 A GLU 217 ? A GLU 130 17 1 Y 1 A THR 218 ? A THR 131 18 1 Y 1 B SER 88 ? B SER 1 19 1 Y 1 B MET 89 ? B MET 2 20 1 Y 1 B GLY 90 ? B GLY 3 21 1 Y 1 B LYS 91 ? B LYS 4 22 1 Y 1 B GLN 205 ? B GLN 118 23 1 Y 1 B MET 206 ? B MET 119 24 1 Y 1 B ASP 207 ? B ASP 120 25 1 Y 1 B TYR 208 ? B TYR 121 26 1 Y 1 B ALA 209 ? B ALA 122 27 1 Y 1 B THR 210 ? B THR 123 28 1 Y 1 B ASN 211 ? B ASN 124 29 1 Y 1 B THR 212 ? B THR 125 30 1 Y 1 B GLN 213 ? B GLN 126 31 1 Y 1 B ASP 214 ? B ASP 127 32 1 Y 1 B GLU 215 ? B GLU 128 33 1 Y 1 B GLU 216 ? B GLU 129 34 1 Y 1 B GLU 217 ? B GLU 130 35 1 Y 1 B THR 218 ? B THR 131 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6F5B 'double helix' 6F5B 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DG 1 1_555 C DC 10 1_555 0.129 -0.122 -0.309 -1.690 -8.305 -3.003 1 D_DG1:DC10_C D 1 ? C 10 ? 19 1 1 D DC 2 1_555 C DG 9 1_555 -0.006 -0.258 0.280 -7.836 -5.886 0.017 2 D_DC2:DG9_C D 2 ? C 9 ? 19 1 1 D DC 3 1_555 C DG 8 1_555 -0.137 0.256 0.212 -5.793 -8.168 7.284 3 D_DC3:DG8_C D 3 ? C 8 ? 19 1 1 D DT 4 1_555 C DA 7 1_555 -0.537 -0.137 0.291 -2.264 -6.293 -7.982 4 D_DT4:DA7_C D 4 ? C 7 ? 20 1 1 D DA 5 1_555 C DT 6 1_555 -0.135 -0.100 0.206 -2.921 -7.110 -0.601 5 D_DA5:DT6_C D 5 ? C 6 ? 20 1 1 D DT 6 1_555 C DA 5 1_555 0.183 -0.112 -0.109 0.332 -11.141 -3.044 6 D_DT6:DA5_C D 6 ? C 5 ? 20 1 1 D DA 7 1_555 C DT 4 1_555 -0.226 -0.115 -0.346 2.892 1.404 -4.994 7 D_DA7:DT4_C D 7 ? C 4 ? 20 1 1 D DG 8 1_555 C DC 3 1_555 0.257 0.091 0.141 5.836 -15.647 1.385 8 D_DG8:DC3_C D 8 ? C 3 ? 19 1 1 D DG 9 1_555 C DC 2 1_555 -0.043 -0.036 0.409 6.306 -10.688 -1.538 9 D_DG9:DC2_C D 9 ? C 2 ? 19 1 1 D DC 10 1_555 C DG 1 1_555 0.454 -0.180 0.706 -7.384 -7.874 -1.169 10 D_DC10:DG1_C D 10 ? C 1 ? 19 1 1 F DG 1 1_555 E DC 10 1_555 -0.113 -0.117 0.092 -5.322 -10.332 -0.564 11 F_DG1:DC10_E F 1 ? E 10 ? 19 1 1 F DC 2 1_555 E DG 9 1_555 0.085 -0.228 0.157 -6.704 -8.785 -0.681 12 F_DC2:DG9_E F 2 ? E 9 ? 19 1 1 F DC 3 1_555 E DG 8 1_555 0.278 -0.090 0.171 3.152 -9.335 -3.455 13 F_DC3:DG8_E F 3 ? E 8 ? 19 1 1 F DT 4 1_555 E DA 7 1_555 -0.146 -0.177 0.397 -8.735 -6.352 6.166 14 F_DT4:DA7_E F 4 ? E 7 ? 20 1 1 F DA 5 1_555 E DT 6 1_555 -0.075 -0.094 0.287 7.908 -11.235 -2.979 15 F_DA5:DT6_E F 5 ? E 6 ? 20 1 1 F DT 6 1_555 E DA 5 1_555 0.418 0.000 0.328 6.960 -11.235 -6.323 16 F_DT6:DA5_E F 6 ? E 5 ? 20 1 1 F DA 7 1_555 E DT 4 1_555 0.077 -0.024 -0.009 -2.320 -7.219 -3.580 17 F_DA7:DT4_E F 7 ? E 4 ? 20 1 1 F DG 8 1_555 E DC 3 1_555 -0.292 -0.064 -0.081 -2.733 -12.180 5.824 18 F_DG8:DC3_E F 8 ? E 3 ? 19 1 1 F DG 9 1_555 E DC 2 1_555 -0.029 0.076 -0.274 -7.634 -9.266 5.139 19 F_DG9:DC2_E F 9 ? E 2 ? 19 1 1 F DC 10 1_555 E DG 1 1_555 0.693 -0.035 -0.334 4.449 -5.289 0.690 20 F_DC10:DG1_E F 10 ? E 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DG 1 1_555 C DC 10 1_555 D DC 2 1_555 C DG 9 1_555 -0.104 -0.437 3.332 -5.610 1.299 31.488 -1.032 -0.843 3.281 2.369 10.230 31.997 1 DD_DG1DC2:DG9DC10_CC D 1 ? C 10 ? D 2 ? C 9 ? 1 D DC 2 1_555 C DG 9 1_555 D DC 3 1_555 C DG 8 1_555 0.144 -0.342 3.290 3.492 2.278 35.723 -0.880 0.267 3.262 3.698 -5.669 35.958 2 DD_DC2DC3:DG8DG9_CC D 2 ? C 9 ? D 3 ? C 8 ? 1 D DC 3 1_555 C DG 8 1_555 D DT 4 1_555 C DA 7 1_555 -0.185 0.029 3.373 -0.961 1.300 31.042 -0.202 0.156 3.376 2.426 1.795 31.083 3 DD_DC3DT4:DA7DG8_CC D 3 ? C 8 ? D 4 ? C 7 ? 1 D DT 4 1_555 C DA 7 1_555 D DA 5 1_555 C DT 6 1_555 0.134 0.784 3.207 1.051 0.057 43.385 1.055 -0.082 3.210 0.077 -1.422 43.397 4 DD_DT4DA5:DT6DA7_CC D 4 ? C 7 ? D 5 ? C 6 ? 1 D DA 5 1_555 C DT 6 1_555 D DT 6 1_555 C DA 5 1_555 -0.200 -0.538 3.227 2.421 -2.000 33.684 -0.606 0.730 3.231 -3.441 -4.166 33.826 5 DD_DA5DT6:DA5DT6_CC D 5 ? C 6 ? D 6 ? C 5 ? 1 D DT 6 1_555 C DA 5 1_555 D DA 7 1_555 C DT 4 1_555 0.636 0.348 3.319 3.610 5.236 33.081 -0.280 -0.490 3.382 9.092 -6.267 33.670 6 DD_DT6DA7:DT4DA5_CC D 6 ? C 5 ? D 7 ? C 4 ? 1 D DA 7 1_555 C DT 4 1_555 D DG 8 1_555 C DC 3 1_555 -0.639 0.034 3.292 -7.116 1.997 35.999 -0.226 0.017 3.351 3.190 11.366 36.726 7 DD_DA7DG8:DC3DT4_CC D 7 ? C 4 ? D 8 ? C 3 ? 1 D DG 8 1_555 C DC 3 1_555 D DG 9 1_555 C DC 2 1_555 -0.147 -0.465 3.208 -6.747 8.619 30.055 -2.358 -0.918 2.931 15.969 12.501 31.943 8 DD_DG8DG9:DC2DC3_CC D 8 ? C 3 ? D 9 ? C 2 ? 1 D DG 9 1_555 C DC 2 1_555 D DC 10 1_555 C DG 1 1_555 0.231 -1.382 3.596 -2.785 -0.833 40.057 -1.908 -0.685 3.600 -1.214 4.059 40.158 9 DD_DG9DC10:DG1DC2_CC D 9 ? C 2 ? D 10 ? C 1 ? 1 D DC 10 1_555 C DG 1 1_555 F DG 1 1_555 E DC 10 1_555 -0.024 -1.128 3.124 5.111 7.480 22.573 -4.803 1.508 2.557 18.196 -12.433 24.301 10 DF_DC10DG1:DC10DG1_EC D 10 ? C 1 ? F 1 ? E 10 ? 1 F DG 1 1_555 E DC 10 1_555 F DC 2 1_555 E DG 9 1_555 -0.260 -0.977 3.266 1.181 4.493 37.655 -2.066 0.549 3.123 6.929 -1.822 37.930 11 FF_DG1DC2:DG9DC10_EE F 1 ? E 10 ? F 2 ? E 9 ? 1 F DC 2 1_555 E DG 9 1_555 F DC 3 1_555 E DG 8 1_555 0.084 -0.075 3.115 2.839 6.976 32.547 -1.231 0.302 3.030 12.244 -4.983 33.385 12 FF_DC2DC3:DG8DG9_EE F 2 ? E 9 ? F 3 ? E 8 ? 1 F DC 3 1_555 E DG 8 1_555 F DT 4 1_555 E DA 7 1_555 1.084 -0.479 3.560 2.111 8.775 30.620 -2.597 -1.558 3.363 16.180 -3.892 31.892 13 FF_DC3DT4:DA7DG8_EE F 3 ? E 8 ? F 4 ? E 7 ? 1 F DT 4 1_555 E DA 7 1_555 F DA 5 1_555 E DT 6 1_555 -0.628 0.285 2.854 0.804 -0.107 38.035 0.450 1.052 2.840 -0.165 -1.234 38.044 14 FF_DT4DA5:DT6DA7_EE F 4 ? E 7 ? F 5 ? E 6 ? 1 F DA 5 1_555 E DT 6 1_555 F DT 6 1_555 E DA 5 1_555 -0.096 -0.896 3.339 -0.363 1.038 33.750 -1.713 0.105 3.311 1.788 0.625 33.767 15 FF_DA5DT6:DA5DT6_EE F 5 ? E 6 ? F 6 ? E 5 ? 1 F DT 6 1_555 E DA 5 1_555 F DA 7 1_555 E DT 4 1_555 0.039 -0.128 3.344 1.755 -4.386 39.148 0.341 0.155 3.337 -6.517 -2.607 39.421 16 FF_DT6DA7:DT4DA5_EE F 6 ? E 5 ? F 7 ? E 4 ? 1 F DA 7 1_555 E DT 4 1_555 F DG 8 1_555 E DC 3 1_555 0.536 -0.223 3.516 1.044 3.650 30.623 -1.182 -0.789 3.482 6.879 -1.967 30.852 17 FF_DA7DG8:DC3DT4_EE F 7 ? E 4 ? F 8 ? E 3 ? 1 F DG 8 1_555 E DC 3 1_555 F DG 9 1_555 E DC 2 1_555 -0.681 0.283 3.338 -3.507 4.351 37.023 -0.151 0.584 3.397 6.804 5.485 37.428 18 FF_DG8DG9:DC2DC3_EE F 8 ? E 3 ? F 9 ? E 2 ? 1 F DG 9 1_555 E DC 2 1_555 F DC 10 1_555 E DG 1 1_555 -0.295 -0.056 2.922 -1.086 2.483 37.889 -0.370 0.330 2.920 3.817 1.670 37.982 19 FF_DG9DC10:DG1DC2_EE F 9 ? E 2 ? F 10 ? E 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Academy of Finland' Finland ? 1 'Jane and Aatos Erkko Foundation' Finland ? 2 'Biocenter Oulu, University of Oulu' Finland ? 3 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'PARP2 homology model' # _atom_sites.entry_id 6F5B _atom_sites.fract_transf_matrix[1][1] 0.015833 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011854 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010421 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_