HEADER SUGAR BINDING PROTEIN 12-DEC-17 6F7W TITLE CRYSTAL STRUCTURE OF DIMETHYLATED RSL - CUCURBIT[7]URIL COMPLEX, C2221 TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUCOSE-BINDING LECTIN PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PUTATIVE FUCOSE-BINDING LECTIN PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: RECOMBINANT PROTEIN DIMETHYLATED AT LYSINE RESIDUES COMPND 8 AND N-TERMINUS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SOLANACEARUM; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS SOLANACEARUM; SOURCE 4 ORGANISM_TAXID: 305; SOURCE 5 GENE: RSP795_21825, RSP799_05830, RUN39_V1_50103; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CUCURBITURIL, DIMETHYLLYSINE, SUPRAMOLECULAR RECOGNITION, SUGAR KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.GUAGNINI,M.L.RENNIE,P.B.CROWLEY REVDAT 4 17-JAN-24 6F7W 1 REMARK REVDAT 3 05-AUG-20 6F7W 1 SEQRES LINK REVDAT 2 13-JUN-18 6F7W 1 JRNL REVDAT 1 30-MAY-18 6F7W 0 JRNL AUTH F.GUAGNINI,P.M.ANTONIK,M.L.RENNIE,P.O'BYRNE,A.R.KHAN, JRNL AUTH 2 R.PINALLI,E.DALCANALE,P.B.CROWLEY JRNL TITL CUCURBIT[7]URIL-DIMETHYLLYSINE RECOGNITION IN A MODEL JRNL TITL 2 PROTEIN. JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 57 7126 2018 JRNL REFN ESSN 1521-3773 JRNL PMID 29673020 JRNL DOI 10.1002/ANIE.201803232 REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 74734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.125 REMARK 3 R VALUE (WORKING SET) : 0.124 REMARK 3 FREE R VALUE : 0.151 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3865 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2070 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 301 REMARK 3 SOLVENT ATOMS : 382 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : 1.05000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.039 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.039 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.338 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6F7W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78616 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 43.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BT9 CHAIN A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350 200 MM SODIUM MALONATE PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.29750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.29750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.17150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.58800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.17150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.58800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.29750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.17150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.58800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 73.29750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.17150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.58800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 90 REMARK 465 ASN B 90 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SNM A 1 CA - C - N ANGL. DEV. = 15.2 DEGREES REMARK 500 SNM C 1 CA - C - N ANGL. DEV. = 17.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 79 51.55 -146.94 REMARK 500 ASN B 79 59.66 -143.66 REMARK 500 ASN C 79 49.45 -147.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 323 DISTANCE = 6.10 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 104 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 QQ7 A 101 O07 REMARK 620 2 QQ7 A 101 O10 86.4 REMARK 620 3 QQ7 B 101 O06 44.5 43.0 REMARK 620 4 QQ7 B 101 O 47.7 39.4 3.8 REMARK 620 5 QQ7 C 101 O02 46.1 42.5 3.5 5.6 REMARK 620 6 QQ7 C 101 O07 49.3 38.8 4.9 3.7 3.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QQ7 A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QQ7 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue QQ7 C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 104 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6F7Y RELATED DB: PDB REMARK 900 RELATED ID: 6F7X RELATED DB: PDB DBREF1 6F7W A 1 90 UNP A0A0S4TLR1_RALSL DBREF2 6F7W A A0A0S4TLR1 2 91 DBREF1 6F7W B 1 90 UNP A0A0S4TLR1_RALSL DBREF2 6F7W B A0A0S4TLR1 2 91 DBREF1 6F7W C 1 90 UNP A0A0S4TLR1_RALSL DBREF2 6F7W C A0A0S4TLR1 2 91 SEQRES 1 A 90 SNM SER VAL GLN THR ALA ALA THR SER TRP GLY THR VAL SEQRES 2 A 90 PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY MLY ILE SEQRES 3 A 90 THR GLU ARG CYS TRP ASP GLY MLY GLY TRP TYR THR GLY SEQRES 4 A 90 ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SER SEQRES 5 A 90 TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR ALA SEQRES 6 A 90 SER THR GLY THR THR THR THR GLU TRP CYS TRP ASP GLY SEQRES 7 A 90 ASN GLY TRP THR MLY GLY ALA TYR THR ALA THR ASN SEQRES 1 B 90 SNM SER VAL GLN THR ALA ALA THR SER TRP GLY THR VAL SEQRES 2 B 90 PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY MLY ILE SEQRES 3 B 90 THR GLU ARG CYS TRP ASP GLY MLY GLY TRP TYR THR GLY SEQRES 4 B 90 ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SER SEQRES 5 B 90 TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR ALA SEQRES 6 B 90 SER THR GLY THR THR THR THR GLU TRP CYS TRP ASP GLY SEQRES 7 B 90 ASN GLY TRP THR MLY GLY ALA TYR THR ALA THR ASN SEQRES 1 C 90 SNM SER VAL GLN THR ALA ALA THR SER TRP GLY THR VAL SEQRES 2 C 90 PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY MLY ILE SEQRES 3 C 90 THR GLU ARG CYS TRP ASP GLY MLY GLY TRP TYR THR GLY SEQRES 4 C 90 ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SER SEQRES 5 C 90 TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR ALA SEQRES 6 C 90 SER THR GLY THR THR THR THR GLU TRP CYS TRP ASP GLY SEQRES 7 C 90 ASN GLY TRP THR MLY GLY ALA TYR THR ALA THR ASN MODRES 6F7W SNM A 1 SER MODIFIED RESIDUE MODRES 6F7W MLY A 25 LYS MODIFIED RESIDUE MODRES 6F7W MLY A 34 LYS MODIFIED RESIDUE MODRES 6F7W MLY A 83 LYS MODIFIED RESIDUE MODRES 6F7W SNM B 1 SER MODIFIED RESIDUE MODRES 6F7W MLY B 25 LYS MODIFIED RESIDUE MODRES 6F7W MLY B 34 LYS MODIFIED RESIDUE MODRES 6F7W MLY B 83 LYS MODIFIED RESIDUE MODRES 6F7W SNM C 1 SER MODIFIED RESIDUE MODRES 6F7W MLY C 25 LYS MODIFIED RESIDUE MODRES 6F7W MLY C 34 LYS MODIFIED RESIDUE MODRES 6F7W MLY C 83 LYS MODIFIED RESIDUE HET SNM A 1 8 HET MLY A 25 11 HET MLY A 34 11 HET MLY A 83 11 HET SNM B 1 8 HET MLY B 25 11 HET MLY B 34 19 HET MLY B 83 11 HET SNM C 1 8 HET MLY C 25 11 HET MLY C 34 19 HET MLY C 83 11 HET QQ7 A 101 84 HET GOL A 102 6 HET GOL A 103 6 HET GOL A 104 6 HET QQ7 B 101 84 HET GOL B 102 6 HET GOL B 103 6 HET NA B 104 1 HET QQ7 C 101 84 HET GOL C 102 6 HET GOL C 103 6 HET GOL C 104 6 HETNAM SNM N,N-DIMETHYL-L-SERINE HETNAM MLY N-DIMETHYL-LYSINE HETNAM QQ7 CUCURBIT[7]URIL HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 SNM 3(C5 H11 N O3) FORMUL 1 MLY 9(C8 H18 N2 O2) FORMUL 4 QQ7 3(C42 H42 N28 O14) FORMUL 5 GOL 8(C3 H8 O3) FORMUL 11 NA NA 1+ FORMUL 16 HOH *382(H2 O) SHEET 1 AA1 4 GLN A 4 TRP A 10 0 SHEET 2 AA1 4 SER A 15 ASN A 22 -1 O ALA A 21 N GLN A 4 SHEET 3 AA1 4 MLY A 25 TRP A 31 -1 O ARG A 29 N VAL A 18 SHEET 4 AA1 4 TRP A 36 PRO A 44 -1 O GLU A 43 N ILE A 26 SHEET 1 AA2 4 ASN A 47 VAL A 55 0 SHEET 2 AA2 4 ALA A 58 THR A 67 -1 O ARG A 62 N THR A 51 SHEET 3 AA2 4 THR A 70 TRP A 76 -1 O THR A 72 N ALA A 65 SHEET 4 AA2 4 TRP A 81 MLY A 83 -1 O THR A 82 N CYS A 75 SHEET 1 AA3 4 GLN B 4 TRP B 10 0 SHEET 2 AA3 4 SER B 15 ASN B 22 -1 O ALA B 21 N GLN B 4 SHEET 3 AA3 4 MLY B 25 TRP B 31 -1 O ARG B 29 N VAL B 18 SHEET 4 AA3 4 TRP B 36 PRO B 44 -1 O TYR B 37 N CYS B 30 SHEET 1 AA4 4 ASN B 47 VAL B 55 0 SHEET 2 AA4 4 ALA B 58 THR B 67 -1 O ARG B 62 N THR B 51 SHEET 3 AA4 4 THR B 70 TRP B 76 -1 O THR B 72 N ALA B 65 SHEET 4 AA4 4 TRP B 81 MLY B 83 -1 O THR B 82 N CYS B 75 SHEET 1 AA5 4 GLN C 4 TRP C 10 0 SHEET 2 AA5 4 SER C 15 ASN C 22 -1 O ALA C 21 N GLN C 4 SHEET 3 AA5 4 MLY C 25 TRP C 31 -1 O MLY C 25 N ASN C 22 SHEET 4 AA5 4 TRP C 36 PRO C 44 -1 O TYR C 37 N CYS C 30 SHEET 1 AA6 4 ASN C 47 VAL C 55 0 SHEET 2 AA6 4 ALA C 58 THR C 67 -1 O ARG C 62 N THR C 51 SHEET 3 AA6 4 THR C 70 TRP C 76 -1 O THR C 72 N ALA C 65 SHEET 4 AA6 4 TRP C 81 MLY C 83 -1 O THR C 82 N CYS C 75 LINK C SNM A 1 N SER A 2 1555 1555 1.31 LINK C GLY A 24 N MLY A 25 1555 1555 1.34 LINK C MLY A 25 N ILE A 26 1555 1555 1.33 LINK C GLY A 33 N MLY A 34 1555 1555 1.32 LINK C MLY A 34 N GLY A 35 1555 1555 1.31 LINK C THR A 82 N MLY A 83 1555 1555 1.32 LINK C MLY A 83 N GLY A 84 1555 1555 1.33 LINK C SNM B 1 N SER B 2 1555 1555 1.28 LINK C GLY B 24 N MLY B 25 1555 1555 1.33 LINK C MLY B 25 N ILE B 26 1555 1555 1.33 LINK C GLY B 33 N MLY B 34 1555 1555 1.34 LINK C MLY B 34 N GLY B 35 1555 1555 1.31 LINK C THR B 82 N MLY B 83 1555 1555 1.32 LINK C MLY B 83 N GLY B 84 1555 1555 1.33 LINK C SNM C 1 N SER C 2 1555 1555 1.30 LINK C GLY C 24 N MLY C 25 1555 1555 1.34 LINK C MLY C 25 N ILE C 26 1555 1555 1.33 LINK C GLY C 33 N MLY C 34 1555 1555 1.33 LINK C MLY C 34 N GLY C 35 1555 1555 1.32 LINK C THR C 82 N MLY C 83 1555 1555 1.32 LINK C MLY C 83 N GLY C 84 1555 1555 1.33 LINK O07 QQ7 A 101 NA NA B 104 1555 5545 2.53 LINK O10 QQ7 A 101 NA NA B 104 1555 5545 2.40 LINK O06 QQ7 B 101 NA NA B 104 1555 1555 2.57 LINK O QQ7 B 101 NA NA B 104 1555 1555 2.40 LINK NA NA B 104 O02 QQ7 C 101 1555 1455 2.56 LINK NA NA B 104 O07 QQ7 C 101 1555 1455 2.41 CISPEP 1 VAL A 13 PRO A 14 0 -6.96 CISPEP 2 VAL B 13 PRO B 14 0 -8.33 CISPEP 3 VAL C 13 PRO C 14 0 -6.30 SITE 1 AC1 20 MLY A 34 GLY A 35 TRP A 36 TYR A 37 SITE 2 AC1 20 HOH A 201 HOH A 205 HOH A 216 HOH A 242 SITE 3 AC1 20 HOH A 245 HOH A 258 HOH A 263 HOH A 280 SITE 4 AC1 20 QQ7 B 101 NA B 104 HOH B 207 HOH B 218 SITE 5 AC1 20 TYR C 37 QQ7 C 101 HOH C 241 HOH C 326 SITE 1 AC2 10 ARG A 62 GLU A 73 GLY A 84 ALA A 85 SITE 2 AC2 10 TYR A 86 HOH A 224 HOH A 243 ILE C 16 SITE 3 AC2 10 TRP C 31 TRP C 36 SITE 1 AC3 7 ARG A 17 GLU A 28 ALA A 40 PHE A 41 SITE 2 AC3 7 TRP A 76 TRP A 81 HOH A 236 SITE 1 AC4 9 SER A 2 GLN A 4 ALA A 21 ASN A 23 SITE 2 AC4 9 GLY A 24 ASP A 46 HOH A 252 HOH A 266 SITE 3 AC4 9 MLY B 25 SITE 1 AC5 17 TYR A 37 QQ7 A 101 HOH A 216 MLY B 34 SITE 2 AC5 17 GLY B 35 TRP B 36 TYR B 37 NA B 104 SITE 3 AC5 17 HOH B 201 HOH B 207 HOH B 213 HOH B 218 SITE 4 AC5 17 HOH B 221 HOH B 255 HOH B 258 QQ7 C 101 SITE 5 AC5 17 HOH C 208 SITE 1 AC6 10 ILE A 16 TRP A 31 TRP A 36 ARG B 62 SITE 2 AC6 10 GLU B 73 GLY B 84 ALA B 85 TYR B 86 SITE 3 AC6 10 HOH B 216 HOH B 232 SITE 1 AC7 6 ARG B 17 GLU B 28 ALA B 40 TRP B 76 SITE 2 AC7 6 TRP B 81 HOH B 234 SITE 1 AC8 3 QQ7 A 101 QQ7 B 101 QQ7 C 101 SITE 1 AC9 18 QQ7 A 101 HOH A 216 HOH A 242 HOH A 280 SITE 2 AC9 18 TYR B 37 QQ7 B 101 NA B 104 HOH B 221 SITE 3 AC9 18 MLY C 34 GLY C 35 TRP C 36 TYR C 37 SITE 4 AC9 18 HOH C 201 HOH C 208 HOH C 238 HOH C 241 SITE 5 AC9 18 HOH C 253 HOH C 270 SITE 1 AD1 9 ILE B 16 TRP B 36 ARG C 62 GLU C 73 SITE 2 AD1 9 GLY C 84 ALA C 85 TYR C 86 HOH C 240 SITE 3 AD1 9 HOH C 250 SITE 1 AD2 6 ARG C 17 GLU C 28 ALA C 40 TRP C 76 SITE 2 AD2 6 TRP C 81 HOH C 246 SITE 1 AD3 6 THR A 69 THR B 67 SNM C 1 ASN C 22 SITE 2 AD3 6 ASN C 23 HOH C 214 CRYST1 50.343 87.176 146.595 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019864 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011471 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006822 0.00000 HETATM 1 N SNM A 1 -3.782 19.820 2.628 1.00 55.85 N ANISOU 1 N SNM A 1 6785 7124 7310 -379 -19 -120 N HETATM 2 CA SNM A 1 -5.150 19.990 2.044 1.00 45.55 C ANISOU 2 CA SNM A 1 6078 6199 5027 -1673 682 -997 C HETATM 3 CB SNM A 1 -5.596 21.454 2.095 1.00 54.74 C ANISOU 3 CB SNM A 1 6740 7004 7055 -564 634 -105 C HETATM 4 OG SNM A 1 -7.023 21.511 2.205 1.00 57.14 O ANISOU 4 OG SNM A 1 6724 7164 7820 -1172 995 278 O HETATM 5 C SNM A 1 -5.322 19.408 0.634 1.00 40.26 C ANISOU 5 C SNM A 1 5376 6098 3822 -1056 1551 -26 C HETATM 6 O SNM A 1 -6.426 18.765 0.552 1.00 37.46 O ANISOU 6 O SNM A 1 6250 4415 3566 -1330 2336 -797 O HETATM 7 C1 SNM A 1 -3.508 18.393 2.965 1.00 50.72 C ANISOU 7 C1 SNM A 1 5965 7022 6282 -90 123 -83 C HETATM 8 C2 SNM A 1 -2.676 20.451 1.855 1.00 57.18 C ANISOU 8 C2 SNM A 1 7225 7259 7239 -366 232 77 C