HEADER OXIDOREDUCTASE 12-DEC-17 6F8A TITLE CRYSTAL STRUCTURE OF CYTOCHROME P450 CYP260A1 (S276I) BOUND WITH TITLE 2 HISTIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 CYP260A1; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SORANGIUM CELLULOSUM (STRAIN SO CE56); SOURCE 3 ORGANISM_COMMON: POLYANGIUM CELLULOSUM (STRAIN SO CE56); SOURCE 4 ORGANISM_TAXID: 448385; SOURCE 5 STRAIN: SO CE56; SOURCE 6 GENE: SCE1588; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS BACTERIAL PROTEINS, SORANGIUM CELLULOSUM, CYTOCHROME P-450 ENZYME KEYWDS 2 SYSTEM, CYTOCHROME P450, HYDROXYLATION, HEME, OXIDATION-REDUCTION, KEYWDS 3 PROGESTERONE, HISTIDINE, BIOCATALYSIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.K.JOZWIK,A.M.W.H.THUNNISSEN REVDAT 3 17-JAN-24 6F8A 1 LINK REVDAT 2 02-MAY-18 6F8A 1 JRNL REVDAT 1 14-MAR-18 6F8A 0 JRNL AUTH Y.KHATRI,I.K.JOZWIK,M.RINGLE,I.A.IONESCU,M.LITZENBURGER, JRNL AUTH 2 M.C.HUTTER,A.W.H.THUNNISSEN,R.BERNHARDT JRNL TITL STRUCTURE-BASED ENGINEERING OF STEROIDOGENIC CYP260A1 FOR JRNL TITL 2 STEREO- AND REGIOSELECTIVE HYDROXYLATION OF PROGESTERONE. JRNL REF ACS CHEM. BIOL. V. 13 1021 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 29509407 JRNL DOI 10.1021/ACSCHEMBIO.8B00026 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 167978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 16858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6787 - 4.1938 0.99 10497 529 0.1659 0.1624 REMARK 3 2 4.1938 - 3.3290 1.00 10445 572 0.1572 0.1675 REMARK 3 3 3.3290 - 2.9083 1.00 10493 636 0.1709 0.1817 REMARK 3 4 2.9083 - 2.6424 0.99 10469 469 0.1783 0.1868 REMARK 3 5 2.6424 - 2.4530 0.99 10490 526 0.1687 0.1971 REMARK 3 6 2.4530 - 2.3084 1.00 10485 549 0.1649 0.1748 REMARK 3 7 2.3084 - 2.1928 1.00 10541 543 0.1637 0.1855 REMARK 3 8 2.1928 - 2.0973 1.00 10479 572 0.1685 0.1857 REMARK 3 9 2.0973 - 2.0166 1.00 10473 542 0.1714 0.2024 REMARK 3 10 2.0166 - 1.9470 0.98 10279 515 0.1809 0.1968 REMARK 3 11 1.9470 - 1.8861 0.99 10514 563 0.1809 0.2094 REMARK 3 12 1.8861 - 1.8322 1.00 10375 600 0.1778 0.2020 REMARK 3 13 1.8322 - 1.7840 1.00 10553 547 0.1807 0.1891 REMARK 3 14 1.7840 - 1.7405 1.00 10541 586 0.1803 0.1989 REMARK 3 15 1.7405 - 1.7009 1.00 10505 499 0.1863 0.2283 REMARK 3 16 1.7009 - 1.6647 1.00 10376 592 0.1885 0.2200 REMARK 3 17 1.6647 - 1.6314 1.00 10506 563 0.1907 0.2025 REMARK 3 18 1.6314 - 1.6006 1.00 10494 590 0.1879 0.2233 REMARK 3 19 1.6006 - 1.5720 0.98 10245 530 0.1971 0.2105 REMARK 3 20 1.5720 - 1.5454 0.98 10350 561 0.2059 0.2111 REMARK 3 21 1.5454 - 1.5204 0.99 10455 563 0.2017 0.2213 REMARK 3 22 1.5204 - 1.4970 0.99 10381 620 0.2056 0.2293 REMARK 3 23 1.4970 - 1.4750 1.00 10430 556 0.2130 0.2317 REMARK 3 24 1.4750 - 1.4542 0.99 10487 622 0.2177 0.2442 REMARK 3 25 1.4542 - 1.4346 1.00 10374 572 0.2252 0.2444 REMARK 3 26 1.4346 - 1.4160 0.99 10585 501 0.2266 0.2494 REMARK 3 27 1.4160 - 1.3983 1.00 10308 535 0.2350 0.2800 REMARK 3 28 1.3983 - 1.3814 1.00 10684 592 0.2441 0.2766 REMARK 3 29 1.3814 - 1.3653 1.00 10282 630 0.2433 0.2651 REMARK 3 30 1.3653 - 1.3500 1.00 10493 583 0.2474 0.2487 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 6610 REMARK 3 ANGLE : 1.185 9040 REMARK 3 CHIRALITY : 0.076 974 REMARK 3 PLANARITY : 0.007 1181 REMARK 3 DIHEDRAL : 14.630 2460 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F8A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007928. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91165 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 167978 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 46.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.31300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LIV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE PH 6.5, 16% REMARK 280 (W/V) PEG 3350, 0.2 M MGCL2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.61050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.57550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.61050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.57550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NH2 ARG B 115 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 395 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 465 HIS A 398 REMARK 465 HIS A 399 REMARK 465 HIS A 400 REMARK 465 MET B 1 REMARK 465 HIS B 396 REMARK 465 HIS B 397 REMARK 465 HIS B 398 REMARK 465 HIS B 399 REMARK 465 HIS B 400 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 121 OE1 GLU A 370 1.74 REMARK 500 O HOH A 900 O HOH A 941 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CZ ARG B 115 NH2 ARG B 115 2758 1.30 REMARK 500 OE1 GLU A 146 CB ALA B 82 1545 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY B 269 C GLY B 269 O -0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 45 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 85 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 115 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 156 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 10 46.52 -91.29 REMARK 500 PHE A 128 -61.92 -140.12 REMARK 500 TYR A 231 -70.79 -94.12 REMARK 500 ASP A 290 -122.89 54.24 REMARK 500 ASP A 290 -123.03 54.24 REMARK 500 ALA A 303 67.17 -109.55 REMARK 500 PHE B 104 -25.89 -146.58 REMARK 500 PHE B 128 -59.98 -139.65 REMARK 500 VAL B 163 -62.47 -101.43 REMARK 500 TYR B 231 -69.93 -92.72 REMARK 500 ASP B 290 -117.29 51.62 REMARK 500 ALA B 303 69.66 -109.54 REMARK 500 GLU B 369 -108.92 -133.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 340 SG REMARK 620 2 HEM A 501 NA 94.2 REMARK 620 3 HEM A 501 NB 89.5 89.9 REMARK 620 4 HEM A 501 NC 90.2 175.4 91.5 REMARK 620 5 HEM A 501 ND 94.2 87.1 175.3 91.2 REMARK 620 6 HIS A 502 NE2 174.9 88.6 94.7 86.8 81.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 340 SG REMARK 620 2 HEM A 501 NA 90.6 REMARK 620 3 HEM A 501 NB 78.9 84.4 REMARK 620 4 HEM A 501 NC 82.8 165.6 81.7 REMARK 620 5 HEM A 501 ND 95.6 97.4 174.2 96.0 REMARK 620 6 HIS A 502 NE2 168.2 95.7 91.7 88.7 93.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 340 SG REMARK 620 2 HEM B 501 NA 94.5 REMARK 620 3 HEM B 501 NB 83.2 85.4 REMARK 620 4 HEM B 501 NC 86.1 172.8 87.6 REMARK 620 5 HEM B 501 ND 98.2 94.3 178.5 92.6 REMARK 620 6 HIS B 502 NE2 171.1 87.9 88.4 90.4 90.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 340 SG REMARK 620 2 HEM B 501 NA 97.4 REMARK 620 3 HEM B 501 NB 95.3 95.8 REMARK 620 4 HEM B 501 NC 88.4 164.6 97.9 REMARK 620 5 HEM B 501 ND 91.0 83.6 173.7 82.1 REMARK 620 6 HIS B 502 NE2 169.0 84.7 95.2 86.9 78.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HIS A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HIS B 502 DBREF 6F8A A 1 394 UNP A9FDB7 A9FDB7_SORC5 1 394 DBREF 6F8A B 1 394 UNP A9FDB7 A9FDB7_SORC5 1 394 SEQADV 6F8A ILE A 276 UNP A9FDB7 SER 276 ENGINEERED MUTATION SEQADV 6F8A HIS A 395 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS A 396 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS A 397 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS A 398 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS A 399 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS A 400 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A ILE B 276 UNP A9FDB7 SER 276 ENGINEERED MUTATION SEQADV 6F8A HIS B 395 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS B 396 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS B 397 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS B 398 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS B 399 UNP A9FDB7 EXPRESSION TAG SEQADV 6F8A HIS B 400 UNP A9FDB7 EXPRESSION TAG SEQRES 1 A 400 MET ASP PHE PRO LEU ALA ASN LEU PHE PHE VAL PRO SER SEQRES 2 A 400 GLU ASP ALA THR ALA PHE GLY ARG ARG LEU ARG ALA ALA SEQRES 3 A 400 ALA GLN GLN ALA PRO ILE VAL PHE ASP THR ALA PHE GLY SEQRES 4 A 400 MET PRO ILE LEU LEU ARG LYS SER HIS ILE THR THR ALA SEQRES 5 A 400 TYR ARG ASP THR ALA THR PHE SER THR ARG MET PHE GLN SEQRES 6 A 400 ALA GLY ILE LEU ASN GLY GLY LEU ALA ALA MET GLN GLY SEQRES 7 A 400 ASP GLU HIS ALA ARG MET ARG ARG VAL TYR ASN MET PHE SEQRES 8 A 400 PHE LEU PRO ARG ALA VAL SER GLN TYR GLU GLU ARG PHE SEQRES 9 A 400 VAL ARG PRO ILE SER GLU GLN VAL VAL ASP ARG LEU ALA SEQRES 10 A 400 GLY LYS PRO ARG VAL ASP LEU LEU GLU ASP PHE ALA MET SEQRES 11 A 400 GLU LEU PRO ARG ARG VAL ILE GLY GLU LEU PHE GLY PHE SEQRES 12 A 400 PRO ALA GLU LYS LEU HIS GLU THR ASP GLU ARG VAL ARG SEQRES 13 A 400 ALA MET LEU ARG GLY LEU VAL ARG MET HIS ASP PRO ALA SEQRES 14 A 400 ALA VAL ALA GLU SER GLN ARG ALA TYR GLY GLU THR LEU SEQRES 15 A 400 GLY LEU ILE THR GLU VAL VAL GLU ARG GLU SER ARG ASP SEQRES 16 A 400 THR SER ASP THR LEU LEU GLY GLU ILE LEU ARG THR LEU SEQRES 17 A 400 LYS ALA GLU HIS MET ASP THR ILE GLU ALA SER ARG GLN SEQRES 18 A 400 ILE VAL LEU SER LEU ILE LEU GLY GLY TYR GLU THR THR SEQRES 19 A 400 SER TRP LEU VAL ALA ASN THR ILE HIS ALA LEU LEU ALA SEQRES 20 A 400 HIS PRO ASP THR LEU ALA ARG VAL ARG GLN ASP PRO SER SEQRES 21 A 400 LEU LEU PRO ALA ALA ILE GLU GLU GLY MET ARG TRP CYS SEQRES 22 A 400 PRO SER ILE PHE GLY VAL LEU ARG MET VAL GLU ARG ASP SEQRES 23 A 400 VAL ARG LEU ASP ASP GLN ALA LEU SER ALA GLY THR VAL SEQRES 24 A 400 VAL CYS LEU ALA GLY ILE ALA GLY ASN TYR ASP GLU THR SEQRES 25 A 400 ALA TYR PRO SER PRO GLU VAL TYR ASP ILE ASP ARG LYS SEQRES 26 A 400 PRO LEU PRO ALA ALA ASN VAL PHE GLY GLY GLY ALA HIS SEQRES 27 A 400 PHE CYS VAL GLY ALA PRO LEU ALA ARG MET GLU ALA ARG SEQRES 28 A 400 VAL GLY LEU GLN ALA LEU LEU ALA ARG PHE PRO GLY LEU SEQRES 29 A 400 ARG ALA VAL PRO GLU GLU ARG PRO SER PHE MET TYR GLY SEQRES 30 A 400 ALA LYS ASP SER VAL ALA HIS GLY PRO ASP LYS LEU PRO SEQRES 31 A 400 VAL LEU LEU HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 400 MET ASP PHE PRO LEU ALA ASN LEU PHE PHE VAL PRO SER SEQRES 2 B 400 GLU ASP ALA THR ALA PHE GLY ARG ARG LEU ARG ALA ALA SEQRES 3 B 400 ALA GLN GLN ALA PRO ILE VAL PHE ASP THR ALA PHE GLY SEQRES 4 B 400 MET PRO ILE LEU LEU ARG LYS SER HIS ILE THR THR ALA SEQRES 5 B 400 TYR ARG ASP THR ALA THR PHE SER THR ARG MET PHE GLN SEQRES 6 B 400 ALA GLY ILE LEU ASN GLY GLY LEU ALA ALA MET GLN GLY SEQRES 7 B 400 ASP GLU HIS ALA ARG MET ARG ARG VAL TYR ASN MET PHE SEQRES 8 B 400 PHE LEU PRO ARG ALA VAL SER GLN TYR GLU GLU ARG PHE SEQRES 9 B 400 VAL ARG PRO ILE SER GLU GLN VAL VAL ASP ARG LEU ALA SEQRES 10 B 400 GLY LYS PRO ARG VAL ASP LEU LEU GLU ASP PHE ALA MET SEQRES 11 B 400 GLU LEU PRO ARG ARG VAL ILE GLY GLU LEU PHE GLY PHE SEQRES 12 B 400 PRO ALA GLU LYS LEU HIS GLU THR ASP GLU ARG VAL ARG SEQRES 13 B 400 ALA MET LEU ARG GLY LEU VAL ARG MET HIS ASP PRO ALA SEQRES 14 B 400 ALA VAL ALA GLU SER GLN ARG ALA TYR GLY GLU THR LEU SEQRES 15 B 400 GLY LEU ILE THR GLU VAL VAL GLU ARG GLU SER ARG ASP SEQRES 16 B 400 THR SER ASP THR LEU LEU GLY GLU ILE LEU ARG THR LEU SEQRES 17 B 400 LYS ALA GLU HIS MET ASP THR ILE GLU ALA SER ARG GLN SEQRES 18 B 400 ILE VAL LEU SER LEU ILE LEU GLY GLY TYR GLU THR THR SEQRES 19 B 400 SER TRP LEU VAL ALA ASN THR ILE HIS ALA LEU LEU ALA SEQRES 20 B 400 HIS PRO ASP THR LEU ALA ARG VAL ARG GLN ASP PRO SER SEQRES 21 B 400 LEU LEU PRO ALA ALA ILE GLU GLU GLY MET ARG TRP CYS SEQRES 22 B 400 PRO SER ILE PHE GLY VAL LEU ARG MET VAL GLU ARG ASP SEQRES 23 B 400 VAL ARG LEU ASP ASP GLN ALA LEU SER ALA GLY THR VAL SEQRES 24 B 400 VAL CYS LEU ALA GLY ILE ALA GLY ASN TYR ASP GLU THR SEQRES 25 B 400 ALA TYR PRO SER PRO GLU VAL TYR ASP ILE ASP ARG LYS SEQRES 26 B 400 PRO LEU PRO ALA ALA ASN VAL PHE GLY GLY GLY ALA HIS SEQRES 27 B 400 PHE CYS VAL GLY ALA PRO LEU ALA ARG MET GLU ALA ARG SEQRES 28 B 400 VAL GLY LEU GLN ALA LEU LEU ALA ARG PHE PRO GLY LEU SEQRES 29 B 400 ARG ALA VAL PRO GLU GLU ARG PRO SER PHE MET TYR GLY SEQRES 30 B 400 ALA LYS ASP SER VAL ALA HIS GLY PRO ASP LYS LEU PRO SEQRES 31 B 400 VAL LEU LEU HIS HIS HIS HIS HIS HIS HIS HET HEM A 501 86 HET HIS A 502 11 HET HEM B 501 86 HET HIS B 502 11 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM HIS HISTIDINE HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 HIS 2(C6 H10 N3 O2 1+) FORMUL 7 HOH *763(H2 O) HELIX 1 AA1 THR A 17 ALA A 30 1 14 HELIX 2 AA2 ARG A 45 ASP A 55 1 11 HELIX 3 AA3 THR A 61 GLY A 67 5 7 HELIX 4 AA4 GLN A 77 PHE A 91 1 15 HELIX 5 AA5 LEU A 93 PHE A 104 1 12 HELIX 6 AA6 PHE A 104 ARG A 115 1 12 HELIX 7 AA7 LEU A 124 PHE A 128 1 5 HELIX 8 AA8 MET A 130 GLY A 142 1 13 HELIX 9 AA9 PRO A 144 GLU A 150 1 7 HELIX 10 AB1 THR A 151 GLY A 161 1 11 HELIX 11 AB2 ASP A 167 GLU A 180 1 14 HELIX 12 AB3 THR A 181 SER A 193 1 13 HELIX 13 AB4 THR A 199 GLU A 211 1 13 HELIX 14 AB5 THR A 215 GLY A 229 1 15 HELIX 15 AB6 TYR A 231 ALA A 247 1 17 HELIX 16 AB7 HIS A 248 ASP A 258 1 11 HELIX 17 AB8 LEU A 261 CYS A 273 1 13 HELIX 18 AB9 GLY A 304 ASP A 310 5 7 HELIX 19 AC1 GLY A 335 PHE A 339 5 5 HELIX 20 AC2 GLY A 342 PHE A 361 1 20 HELIX 21 AC3 ALA A 378 SER A 381 5 4 HELIX 22 AC4 THR B 17 ALA B 30 1 14 HELIX 23 AC5 ARG B 45 ASP B 55 1 11 HELIX 24 AC6 THR B 61 GLY B 67 5 7 HELIX 25 AC7 GLY B 72 MET B 76 5 5 HELIX 26 AC8 GLN B 77 PHE B 91 1 15 HELIX 27 AC9 LEU B 93 PHE B 104 1 12 HELIX 28 AD1 PHE B 104 LEU B 116 1 13 HELIX 29 AD2 LEU B 124 PHE B 128 1 5 HELIX 30 AD3 MET B 130 GLY B 142 1 13 HELIX 31 AD4 PRO B 144 GLU B 150 1 7 HELIX 32 AD5 THR B 151 ARG B 164 1 14 HELIX 33 AD6 ASP B 167 GLU B 180 1 14 HELIX 34 AD7 THR B 181 ARG B 194 1 14 HELIX 35 AD8 THR B 199 GLU B 211 1 13 HELIX 36 AD9 THR B 215 GLY B 229 1 15 HELIX 37 AE1 TYR B 231 HIS B 248 1 18 HELIX 38 AE2 HIS B 248 ASP B 258 1 11 HELIX 39 AE3 LEU B 261 CYS B 273 1 13 HELIX 40 AE4 GLY B 304 ASN B 308 5 5 HELIX 41 AE5 GLY B 335 PHE B 339 5 5 HELIX 42 AE6 GLY B 342 PHE B 361 1 20 HELIX 43 AE7 ALA B 378 SER B 381 5 4 SHEET 1 AA1 6 LEU A 5 ALA A 6 0 SHEET 2 AA1 6 ILE A 32 ASP A 35 1 O PHE A 34 N ALA A 6 SHEET 3 AA1 6 MET A 40 LEU A 43 -1 O ILE A 42 N VAL A 33 SHEET 4 AA1 6 VAL A 299 LEU A 302 1 O CYS A 301 N LEU A 43 SHEET 5 AA1 6 VAL A 279 VAL A 283 -1 N VAL A 279 O LEU A 302 SHEET 6 AA1 6 PHE A 59 SER A 60 -1 N SER A 60 O MET A 282 SHEET 1 AA2 3 ARG A 121 ASP A 123 0 SHEET 2 AA2 3 PRO A 390 LEU A 392 -1 O VAL A 391 N VAL A 122 SHEET 3 AA2 3 ARG A 365 ALA A 366 -1 N ARG A 365 O LEU A 392 SHEET 1 AA3 2 VAL A 287 LEU A 289 0 SHEET 2 AA3 2 GLN A 292 LEU A 294 -1 O LEU A 294 N VAL A 287 SHEET 1 AA4 2 PHE A 374 TYR A 376 0 SHEET 2 AA4 2 HIS A 384 PRO A 386 -1 O GLY A 385 N MET A 375 SHEET 1 AA5 6 LEU B 5 ALA B 6 0 SHEET 2 AA5 6 ILE B 32 ASP B 35 1 O PHE B 34 N ALA B 6 SHEET 3 AA5 6 MET B 40 LEU B 43 -1 O ILE B 42 N VAL B 33 SHEET 4 AA5 6 VAL B 299 LEU B 302 1 O CYS B 301 N LEU B 43 SHEET 5 AA5 6 VAL B 279 VAL B 283 -1 N VAL B 279 O LEU B 302 SHEET 6 AA5 6 PHE B 59 SER B 60 -1 N SER B 60 O MET B 282 SHEET 1 AA6 3 ARG B 121 ASP B 123 0 SHEET 2 AA6 3 PRO B 390 LEU B 392 -1 O VAL B 391 N VAL B 122 SHEET 3 AA6 3 ARG B 365 ALA B 366 -1 N ARG B 365 O LEU B 392 SHEET 1 AA7 2 VAL B 287 LEU B 289 0 SHEET 2 AA7 2 GLN B 292 LEU B 294 -1 O GLN B 292 N LEU B 289 SHEET 1 AA8 2 PHE B 374 TYR B 376 0 SHEET 2 AA8 2 HIS B 384 PRO B 386 -1 O GLY B 385 N MET B 375 LINK SG CYS A 340 FE AHEM A 501 1555 1555 2.20 LINK SG CYS A 340 FE BHEM A 501 1555 1555 2.39 LINK FE AHEM A 501 NE2 HIS A 502 1555 1555 2.20 LINK FE BHEM A 501 NE2 HIS A 502 1555 1555 2.03 LINK SG CYS B 340 FE AHEM B 501 1555 1555 2.34 LINK SG CYS B 340 FE BHEM B 501 1555 1555 2.23 LINK FE AHEM B 501 NE2 HIS B 502 1555 1555 2.11 LINK FE BHEM B 501 NE2 HIS B 502 1555 1555 2.22 CISPEP 1 LYS A 325 PRO A 326 0 -1.44 CISPEP 2 LYS B 325 PRO B 326 0 -1.84 SITE 1 AC1 28 LEU A 73 ALA A 74 HIS A 81 ARG A 85 SITE 2 AC1 28 PHE A 92 LEU A 226 GLY A 229 GLY A 230 SITE 3 AC1 28 THR A 233 THR A 234 LEU A 237 SER A 275 SITE 4 AC1 28 ILE A 276 VAL A 279 ARG A 281 VAL A 332 SITE 5 AC1 28 PHE A 333 GLY A 334 GLY A 335 HIS A 338 SITE 6 AC1 28 CYS A 340 VAL A 341 GLY A 342 LEU A 345 SITE 7 AC1 28 ALA A 346 HIS A 502 HOH A 733 HOH A 780 SITE 1 AC2 8 LEU A 69 LEU A 159 LEU A 228 GLY A 229 SITE 2 AC2 8 THR A 233 HEM A 501 HOH A 606 HOH A 759 SITE 1 AC3 28 LEU B 73 ALA B 74 HIS B 81 ARG B 85 SITE 2 AC3 28 PHE B 92 LEU B 226 GLY B 229 GLY B 230 SITE 3 AC3 28 THR B 233 THR B 234 LEU B 237 SER B 275 SITE 4 AC3 28 ILE B 276 VAL B 279 ARG B 281 VAL B 332 SITE 5 AC3 28 PHE B 333 GLY B 334 GLY B 335 HIS B 338 SITE 6 AC3 28 CYS B 340 VAL B 341 GLY B 342 LEU B 345 SITE 7 AC3 28 ALA B 346 HIS B 502 HOH B 772 HOH B 789 SITE 1 AC4 7 LEU B 69 LEU B 159 LEU B 228 GLY B 229 SITE 2 AC4 7 THR B 233 HEM B 501 HOH B 665 CRYST1 101.221 65.151 128.533 90.00 112.81 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009879 0.000000 0.004156 0.00000 SCALE2 0.000000 0.015349 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008440 0.00000