HEADER HYDROLASE 12-DEC-17 6F8B TITLE LASB BOUND TO THIOL BASED INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELASTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.24.26; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: PSEUDOMONAS AERUGINOSA; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 287 KEYWDS LASB, INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOEHNKE,A.SIKANDAR REVDAT 3 17-JAN-24 6F8B 1 REMARK REVDAT 2 20-JUN-18 6F8B 1 JRNL REVDAT 1 28-MAR-18 6F8B 0 JRNL AUTH A.M.KANY,A.SIKANDAR,J.HAUPENTHAL,S.YAHIAOUI,C.K.MAURER, JRNL AUTH 2 E.PROSCHAK,J.KOHNKE,R.W.HARTMANN JRNL TITL BINDING MODE CHARACTERIZATION AND EARLY IN VIVO EVALUATION JRNL TITL 2 OF FRAGMENT-LIKE THIOLS AS INHIBITORS OF THE VIRULENCE JRNL TITL 3 FACTOR LASB FROM PSEUDOMONAS AERUGINOSA. JRNL REF ACS INFECT DIS V. 4 988 2018 JRNL REFN ESSN 2373-8227 JRNL PMID 29485268 JRNL DOI 10.1021/ACSINFECDIS.8B00010 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 64720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.159 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 3121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0260 - 3.6420 1.00 2939 143 0.1459 0.1484 REMARK 3 2 3.6420 - 2.8909 0.99 2875 162 0.1339 0.1664 REMARK 3 3 2.8909 - 2.5255 0.99 2827 189 0.1353 0.1569 REMARK 3 4 2.5255 - 2.2946 0.99 2897 137 0.1296 0.1370 REMARK 3 5 2.2946 - 2.1302 0.99 2774 199 0.1214 0.1292 REMARK 3 6 2.1302 - 2.0046 0.99 2827 168 0.1292 0.1379 REMARK 3 7 2.0046 - 1.9042 0.98 2824 160 0.1358 0.1730 REMARK 3 8 1.9042 - 1.8213 0.98 2817 151 0.1376 0.1503 REMARK 3 9 1.8213 - 1.7512 0.97 2800 138 0.1419 0.1769 REMARK 3 10 1.7512 - 1.6908 0.97 2842 120 0.1398 0.1536 REMARK 3 11 1.6908 - 1.6379 0.97 2799 130 0.1351 0.1360 REMARK 3 12 1.6379 - 1.5911 0.96 2778 150 0.1400 0.1597 REMARK 3 13 1.5911 - 1.5492 0.96 2704 163 0.1411 0.1618 REMARK 3 14 1.5492 - 1.5114 0.97 2863 117 0.1424 0.1599 REMARK 3 15 1.5114 - 1.4770 0.96 2784 125 0.1558 0.1635 REMARK 3 16 1.4770 - 1.4456 0.96 2762 118 0.1578 0.1892 REMARK 3 17 1.4456 - 1.4167 0.95 2828 100 0.1658 0.1771 REMARK 3 18 1.4167 - 1.3899 0.95 2753 102 0.1772 0.1849 REMARK 3 19 1.3899 - 1.3651 0.95 2775 142 0.1821 0.2229 REMARK 3 20 1.3651 - 1.3420 0.95 2712 126 0.1824 0.2003 REMARK 3 21 1.3420 - 1.3203 0.95 2705 146 0.1984 0.2191 REMARK 3 22 1.3203 - 1.3000 0.94 2714 135 0.2033 0.2453 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2375 REMARK 3 ANGLE : 0.975 3226 REMARK 3 CHIRALITY : 0.087 324 REMARK 3 PLANARITY : 0.007 429 REMARK 3 DIHEDRAL : 15.648 816 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1384 7.9622 -26.8128 REMARK 3 T TENSOR REMARK 3 T11: 0.0646 T22: 0.0783 REMARK 3 T33: 0.1247 T12: -0.0136 REMARK 3 T13: -0.0134 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 0.0202 L22: 0.1252 REMARK 3 L33: 0.1014 L12: -0.0371 REMARK 3 L13: 0.0376 L23: -0.1191 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0333 S13: 0.0619 REMARK 3 S21: -0.1217 S22: 0.1319 S23: 0.2122 REMARK 3 S31: 0.0755 S32: -0.0846 S33: 0.0436 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1931 15.9251 -16.3368 REMARK 3 T TENSOR REMARK 3 T11: 0.1151 T22: 0.0854 REMARK 3 T33: 0.1715 T12: 0.0325 REMARK 3 T13: 0.0512 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.0976 L22: 0.0683 REMARK 3 L33: 0.1293 L12: 0.0718 REMARK 3 L13: -0.0670 L23: -0.0934 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: 0.0254 S13: 0.1946 REMARK 3 S21: 0.0957 S22: 0.1507 S23: 0.2856 REMARK 3 S31: -0.0597 S32: -0.1068 S33: 0.0161 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1515 24.0376 -21.3856 REMARK 3 T TENSOR REMARK 3 T11: 0.1073 T22: -0.0101 REMARK 3 T33: 0.2209 T12: 0.0769 REMARK 3 T13: 0.0131 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 0.0103 L22: 0.0722 REMARK 3 L33: 1.0675 L12: -0.0011 REMARK 3 L13: 0.0652 L23: 0.1614 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: -0.0167 S13: 0.0773 REMARK 3 S21: 0.1431 S22: 0.1339 S23: 0.1971 REMARK 3 S31: -0.4634 S32: 0.1841 S33: 0.1266 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4437 12.4036 -17.6190 REMARK 3 T TENSOR REMARK 3 T11: 0.0769 T22: 0.0626 REMARK 3 T33: 0.0573 T12: 0.0015 REMARK 3 T13: 0.0067 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 0.2068 L22: 0.1302 REMARK 3 L33: 0.0977 L12: -0.0431 REMARK 3 L13: 0.0275 L23: -0.0639 REMARK 3 S TENSOR REMARK 3 S11: -0.0112 S12: -0.0539 S13: 0.0863 REMARK 3 S21: 0.0064 S22: 0.0394 S23: 0.0769 REMARK 3 S31: -0.0362 S32: 0.0018 S33: -0.0066 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4822 13.5169 -23.1748 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.0733 REMARK 3 T33: 0.0721 T12: -0.0086 REMARK 3 T13: -0.0084 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.0175 L22: 0.0610 REMARK 3 L33: 0.0257 L12: -0.0042 REMARK 3 L13: -0.0157 L23: -0.0391 REMARK 3 S TENSOR REMARK 3 S11: 0.0193 S12: -0.0141 S13: 0.0400 REMARK 3 S21: 0.0144 S22: 0.0158 S23: -0.0329 REMARK 3 S31: 0.0467 S32: 0.0591 S33: -0.0002 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4962 6.5684 -9.2031 REMARK 3 T TENSOR REMARK 3 T11: 0.0731 T22: 0.0780 REMARK 3 T33: 0.0748 T12: 0.0048 REMARK 3 T13: -0.0055 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.0110 L22: 0.0437 REMARK 3 L33: 0.0243 L12: 0.0162 REMARK 3 L13: -0.0042 L23: -0.0180 REMARK 3 S TENSOR REMARK 3 S11: -0.0801 S12: -0.0220 S13: 0.0933 REMARK 3 S21: 0.0121 S22: 0.0090 S23: -0.0116 REMARK 3 S31: -0.0975 S32: -0.0102 S33: -0.0006 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5047 -0.2286 -13.3687 REMARK 3 T TENSOR REMARK 3 T11: 0.0526 T22: 0.0679 REMARK 3 T33: 0.0707 T12: 0.0009 REMARK 3 T13: 0.0025 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.0134 L22: 0.1368 REMARK 3 L33: 0.0190 L12: 0.0199 REMARK 3 L13: 0.0016 L23: 0.0199 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.0242 S13: 0.0806 REMARK 3 S21: 0.0279 S22: -0.0137 S23: 0.0302 REMARK 3 S31: 0.0107 S32: -0.0093 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2209 -0.9734 -25.8427 REMARK 3 T TENSOR REMARK 3 T11: 0.0866 T22: 0.0769 REMARK 3 T33: 0.0575 T12: 0.0097 REMARK 3 T13: -0.0019 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.0195 L22: 0.0529 REMARK 3 L33: 0.0411 L12: -0.0318 REMARK 3 L13: 0.0144 L23: 0.0206 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: -0.0003 S13: -0.0613 REMARK 3 S21: -0.0707 S22: -0.0735 S23: 0.0331 REMARK 3 S31: -0.0075 S32: 0.0471 S33: -0.0056 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8285 -6.5619 -10.4558 REMARK 3 T TENSOR REMARK 3 T11: 0.0559 T22: 0.0648 REMARK 3 T33: 0.0481 T12: -0.0043 REMARK 3 T13: 0.0008 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.3415 L22: 0.3026 REMARK 3 L33: 0.1759 L12: -0.1217 REMARK 3 L13: 0.1527 L23: 0.0129 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.0390 S13: -0.0218 REMARK 3 S21: 0.0203 S22: 0.0151 S23: -0.0153 REMARK 3 S31: 0.0459 S32: -0.0216 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 279 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9895 -15.0665 -5.3184 REMARK 3 T TENSOR REMARK 3 T11: 0.0967 T22: 0.0977 REMARK 3 T33: 0.0904 T12: -0.0114 REMARK 3 T13: -0.0010 T23: 0.0515 REMARK 3 L TENSOR REMARK 3 L11: 0.1326 L22: 0.0934 REMARK 3 L33: 0.0180 L12: 0.0996 REMARK 3 L13: 0.0498 L23: 0.0400 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: -0.0483 S13: -0.2374 REMARK 3 S21: 0.0917 S22: 0.0864 S23: -0.0255 REMARK 3 S31: 0.1610 S32: -0.0166 S33: 0.0292 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6F8B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64739 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02876 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19240 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1EZM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 30% (W/V) REMARK 280 PEG 3350, EVAPORATION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.99900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 90 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 299 REMARK 465 ALA A 300 REMARK 465 LEU A 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 28 CG OD1 OD2 REMARK 470 ARG A 29 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 108 CG CD NE CZ NH1 NH2 REMARK 470 MET A 128 CG SD CE REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 ARG A 274 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 85 O HOH A 501 1.96 REMARK 500 O HOH A 510 O HOH A 794 1.98 REMARK 500 O HOH A 871 O HOH A 891 1.99 REMARK 500 O HOH A 675 O HOH A 898 2.01 REMARK 500 O HOH A 685 O HOH A 871 2.05 REMARK 500 OE2 GLU A 2 O HOH A 502 2.08 REMARK 500 O HOH A 557 O HOH A 798 2.08 REMARK 500 O HOH A 658 O HOH A 837 2.11 REMARK 500 O HOH A 724 O HOH A 787 2.13 REMARK 500 O HOH A 833 O HOH A 897 2.13 REMARK 500 O HOH A 742 O HOH A 776 2.16 REMARK 500 O SER A 194 O HOH A 503 2.16 REMARK 500 O HOH A 591 O HOH A 658 2.18 REMARK 500 O HOH A 877 O HOH A 885 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 536 O HOH A 725 2554 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -77.43 -133.31 REMARK 500 SER A 44 7.26 80.73 REMARK 500 SER A 71 90.69 -165.60 REMARK 500 GLU A 111 51.70 -91.28 REMARK 500 THR A 118 -46.82 -131.85 REMARK 500 ALA A 126 -103.44 -153.84 REMARK 500 ASN A 150 -109.80 -108.46 REMARK 500 ARG A 208 -29.31 -140.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 913 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 914 DISTANCE = 7.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 136 OD2 REMARK 620 2 GLU A 172 OE2 94.5 REMARK 620 3 GLU A 175 OE1 85.0 95.0 REMARK 620 4 GLU A 175 OE2 127.7 100.0 44.1 REMARK 620 5 ASP A 183 OD1 160.5 95.6 110.6 66.5 REMARK 620 6 LEU A 185 O 81.6 85.8 166.6 148.9 82.6 REMARK 620 7 HOH A 548 O 87.8 174.7 89.9 82.3 80.9 89.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 140 NE2 REMARK 620 2 HIS A 144 NE2 100.8 REMARK 620 3 GLU A 164 OE2 116.5 93.9 REMARK 620 4 CXH A 403 S08 115.7 121.5 107.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXH A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXH A 404 DBREF 6F8B A 1 301 UNP I6R951 I6R951_PSEAI 198 498 SEQRES 1 A 301 ALA GLU ALA GLY GLY PRO GLY GLY ASN GLN LYS ILE GLY SEQRES 2 A 301 LYS TYR THR TYR GLY SER ASP TYR GLY PRO LEU ILE VAL SEQRES 3 A 301 ASN ASP ARG CYS GLU MET ASP ASP GLY ASN VAL ILE THR SEQRES 4 A 301 VAL ASP MET ASN SER SER THR ASP ASP SER LYS THR THR SEQRES 5 A 301 PRO PHE ARG PHE ALA CYS PRO THR ASN THR TYR LYS GLN SEQRES 6 A 301 VAL ASN GLY ALA TYR SER PRO LEU ASN ASP ALA HIS PHE SEQRES 7 A 301 PHE GLY GLY VAL VAL PHE LYS LEU TYR ARG ASP TRP PHE SEQRES 8 A 301 GLY THR SER PRO LEU THR HIS LYS LEU TYR MET LYS VAL SEQRES 9 A 301 HIS TYR GLY ARG SER VAL GLU ASN ALA TYR TRP ASP GLY SEQRES 10 A 301 THR ALA MET LEU PHE GLY ASP GLY ALA THR MET PHE TYR SEQRES 11 A 301 PRO LEU VAL SER LEU ASP VAL ALA ALA HIS GLU VAL SER SEQRES 12 A 301 HIS GLY PHE THR GLU GLN ASN SER GLY LEU ILE TYR ARG SEQRES 13 A 301 GLY GLN SER GLY GLY MET ASN GLU ALA PHE SER ASP MET SEQRES 14 A 301 ALA GLY GLU ALA ALA GLU PHE TYR MET ARG GLY LYS ASN SEQRES 15 A 301 ASP PHE LEU ILE GLY TYR ASP ILE LYS LYS GLY SER GLY SEQRES 16 A 301 ALA LEU ARG TYR MET ASP GLN PRO SER ARG ASP GLY ARG SEQRES 17 A 301 SER ILE ASP ASN ALA SER GLN TYR TYR ASN GLY ILE ASP SEQRES 18 A 301 VAL HIS HIS SER SER GLY VAL TYR ASN ARG ALA PHE TYR SEQRES 19 A 301 LEU LEU ALA ASN SER PRO GLY TRP ASP THR ARG LYS ALA SEQRES 20 A 301 PHE GLU VAL PHE VAL ASP ALA ASN ARG TYR TYR TRP THR SEQRES 21 A 301 ALA THR SER ASN TYR ASN SER GLY ALA CYS GLY VAL ILE SEQRES 22 A 301 ARG SER ALA GLN ASN ARG ASN TYR SER ALA ALA ASP VAL SEQRES 23 A 301 THR ARG ALA PHE SER THR VAL GLY VAL THR CYS PRO SER SEQRES 24 A 301 ALA LEU HET CA A 401 1 HET ZN A 402 1 HET CXH A 403 13 HET CXH A 404 13 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION HETNAM CXH ~{N}-(3,4-DICHLOROPHENYL)-2-SULFANYL-ETHANAMIDE FORMUL 2 CA CA 2+ FORMUL 3 ZN ZN 2+ FORMUL 4 CXH 2(C8 H7 CL2 N O S) FORMUL 6 HOH *414(H2 O) HELIX 1 AA1 SER A 71 GLY A 92 1 22 HELIX 2 AA2 SER A 134 ASN A 150 1 17 HELIX 3 AA3 ARG A 156 GLY A 180 1 25 HELIX 4 AA4 GLN A 202 GLY A 207 5 6 HELIX 5 AA5 ASN A 212 TYR A 216 5 5 HELIX 6 AA6 ASP A 221 SER A 226 1 6 HELIX 7 AA7 SER A 226 ASN A 238 1 13 HELIX 8 AA8 ASP A 243 TYR A 258 1 16 HELIX 9 AA9 ASN A 264 ARG A 279 1 16 HELIX 10 AB1 SER A 282 VAL A 293 1 12 SHEET 1 AA1 2 GLU A 2 ALA A 3 0 SHEET 2 AA1 2 LEU A 24 ILE A 25 -1 O LEU A 24 N ALA A 3 SHEET 1 AA2 2 GLY A 5 ASN A 9 0 SHEET 2 AA2 2 GLY A 13 TYR A 17 -1 O TYR A 17 N GLY A 5 SHEET 1 AA3 4 VAL A 37 ASP A 41 0 SHEET 2 AA3 4 LEU A 100 VAL A 104 1 O VAL A 104 N VAL A 40 SHEET 3 AA3 4 ALA A 119 PHE A 122 1 O MET A 120 N LYS A 103 SHEET 4 AA3 4 ALA A 113 TRP A 115 -1 N TYR A 114 O LEU A 121 SHEET 1 AA4 2 LEU A 185 ILE A 186 0 SHEET 2 AA4 2 ARG A 198 TYR A 199 -1 O ARG A 198 N ILE A 186 SSBOND 1 CYS A 30 CYS A 58 1555 1555 2.04 SSBOND 2 CYS A 270 CYS A 297 1555 1555 2.04 LINK OD2 ASP A 136 CA CA A 401 1555 1555 2.39 LINK NE2 HIS A 140 ZN ZN A 402 1555 1555 2.04 LINK NE2 HIS A 144 ZN ZN A 402 1555 1555 2.09 LINK OE2 GLU A 164 ZN ZN A 402 1555 1555 1.98 LINK OE2 GLU A 172 CA CA A 401 1555 1555 2.32 LINK OE1 GLU A 175 CA CA A 401 1555 1555 2.35 LINK OE2 GLU A 175 CA CA A 401 1555 1555 3.20 LINK OD1 ASP A 183 CA CA A 401 1555 1555 2.41 LINK O LEU A 185 CA CA A 401 1555 1555 2.36 LINK CA CA A 401 O HOH A 548 1555 1555 2.43 LINK ZN ZN A 402 S08 CXH A 403 1555 1555 2.29 CISPEP 1 CYS A 58 PRO A 59 0 9.62 CISPEP 2 TYR A 63 LYS A 64 0 -4.06 SITE 1 AC1 6 ASP A 136 GLU A 172 GLU A 175 ASP A 183 SITE 2 AC1 6 LEU A 185 HOH A 548 SITE 1 AC2 4 HIS A 140 HIS A 144 GLU A 164 CXH A 403 SITE 1 AC3 9 HIS A 140 GLU A 141 GLU A 164 ARG A 198 SITE 2 AC3 9 HIS A 223 ZN A 402 CXH A 404 HOH A 560 SITE 3 AC3 9 HOH A 668 SITE 1 AC4 9 ASN A 112 ALA A 113 VAL A 137 GLU A 141 SITE 2 AC4 9 ILE A 186 LEU A 197 ARG A 198 CXH A 403 SITE 3 AC4 9 HOH A 547 CRYST1 40.293 89.998 41.857 90.00 114.08 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024818 0.000000 0.011089 0.00000 SCALE2 0.000000 0.011111 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026167 0.00000