HEADER HYDROLASE 14-DEC-17 6F9H TITLE CRYSTAL STRUCTURE OF BARLEY BETA-AMYLASE COMPLEXED WITH 4-S-ALPHA-D- TITLE 2 GLUCOPYRANOSYL-(1,4-DIDEOXY-4-THIO-NOJIRIMYCIN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-AMYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.2; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HORDEUM VULGARE; SOURCE 3 ORGANISM_COMMON: BARLEY; SOURCE 4 ORGANISM_TAXID: 4513 KEYWDS EDIBLE GRAIN, ENDOSPERM, ENZYME INHIBITORS, MODELS, MOLECULAR, KEYWDS 2 MOLECULAR CONFORMATION, STARCH, STRUCTURE-ACTIVITY RELATIONSHIP, KEYWDS 3 BETA-AMYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.MONCAYO,L.L.RODRIGUES,C.E.M.STEVENSON,C.RUZANSKI,M.REJZEK, AUTHOR 2 D.M.LAWSON,J.ANGULO,R.A.FIELD REVDAT 3 17-JAN-24 6F9H 1 HETSYN REVDAT 2 29-JUL-20 6F9H 1 COMPND REMARK HETNAM SITE REVDAT 1 30-JAN-19 6F9H 0 JRNL AUTH M.A.MONCAYO,L.L.RODRIGUES,C.E.M.STEVENSON,C.RUZANSKI, JRNL AUTH 2 M.REJZEK,D.M.LAWSON,J.ANGULO,R.A.FIELD JRNL TITL SYNTHESIS, BIOLOGICAL AND STRUCTURAL ANALYSIS OF PROSPECTIVE JRNL TITL 2 GLYCOSYL-IMINOSUGAR PRODRUGS: IMPACT ON GERMINATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 3 NUMBER OF REFLECTIONS : 32099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1706 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3869 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 294 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.24000 REMARK 3 B22 (A**2) : -1.33000 REMARK 3 B33 (A**2) : 2.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.868 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6F9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007871. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36512 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 59.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 1.05800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2XFR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% POLYACRYLATE AND 100MM TRIS PH 8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.76000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.55500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.76000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.55500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 603 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 VAL A 3 REMARK 465 ASN A 4 REMARK 465 PRO A 490 REMARK 465 THR A 491 REMARK 465 GLY A 492 REMARK 465 GLY A 493 REMARK 465 MET A 494 REMARK 465 GLY A 495 REMARK 465 GLY A 496 REMARK 465 GLN A 497 REMARK 465 ALA A 498 REMARK 465 GLU A 499 REMARK 465 GLY A 500 REMARK 465 PRO A 501 REMARK 465 THR A 502 REMARK 465 CYS A 503 REMARK 465 GLY A 504 REMARK 465 MET A 505 REMARK 465 GLY A 506 REMARK 465 GLY A 507 REMARK 465 GLN A 508 REMARK 465 VAL A 509 REMARK 465 LYS A 510 REMARK 465 GLY A 511 REMARK 465 PRO A 512 REMARK 465 THR A 513 REMARK 465 GLY A 514 REMARK 465 GLY A 515 REMARK 465 MET A 516 REMARK 465 GLY A 517 REMARK 465 GLY A 518 REMARK 465 GLN A 519 REMARK 465 ALA A 520 REMARK 465 GLU A 521 REMARK 465 ASP A 522 REMARK 465 PRO A 523 REMARK 465 THR A 524 REMARK 465 SER A 525 REMARK 465 GLY A 526 REMARK 465 MET A 527 REMARK 465 GLY A 528 REMARK 465 GLY A 529 REMARK 465 GLU A 530 REMARK 465 LEU A 531 REMARK 465 PRO A 532 REMARK 465 ALA A 533 REMARK 465 THR A 534 REMARK 465 MET A 535 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 242 NE CZ NH1 NH2 REMARK 470 GLN A 352 CG CD OE1 NE2 REMARK 470 GLN A 403 CG CD OE1 NE2 REMARK 470 GLU A 408 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 328 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 370 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 143 77.81 -111.03 REMARK 500 PRO A 199 54.29 -109.58 REMARK 500 ILE A 205 60.83 -107.10 REMARK 500 REMARK 500 REMARK: NULL DBREF 6F9H A 1 535 UNP A8CFR3 A8CFR3_HORVU 1 535 SEQADV 6F9H GLU A 165 UNP A8CFR3 ASP 165 VARIANT SEQRES 1 A 535 MET GLU VAL ASN VAL LYS GLY ASN TYR VAL GLN VAL TYR SEQRES 2 A 535 VAL MET LEU PRO LEU ASP ALA VAL SER VAL ASN ASN ARG SEQRES 3 A 535 PHE GLU LYS GLY ASP GLU LEU ARG ALA GLN LEU ARG LYS SEQRES 4 A 535 LEU VAL GLU ALA GLY VAL ASP GLY VAL MET VAL ASP VAL SEQRES 5 A 535 TRP TRP GLY LEU VAL GLU GLY LYS GLY PRO LYS ALA TYR SEQRES 6 A 535 ASP TRP SER ALA TYR LYS GLN LEU PHE GLU LEU VAL GLN SEQRES 7 A 535 LYS ALA GLY LEU LYS LEU GLN ALA ILE MET SER PHE HIS SEQRES 8 A 535 GLN CYS GLY GLY ASN VAL GLY ASP ALA VAL ASN ILE PRO SEQRES 9 A 535 ILE PRO GLN TRP VAL ARG ASP VAL GLY THR ARG ASP PRO SEQRES 10 A 535 ASP ILE PHE TYR THR ASP GLY HIS GLY THR ARG ASN ILE SEQRES 11 A 535 GLU TYR LEU THR LEU GLY VAL ASP ASN GLN PRO LEU PHE SEQRES 12 A 535 HIS GLY ARG SER ALA VAL GLN MET TYR ALA ASP TYR MET SEQRES 13 A 535 THR SER PHE ARG GLU ASN MET LYS GLU PHE LEU ASP ALA SEQRES 14 A 535 GLY VAL ILE VAL ASP ILE GLU VAL GLY LEU GLY PRO ALA SEQRES 15 A 535 GLY GLU MET ARG TYR PRO SER TYR PRO GLN SER HIS GLY SEQRES 16 A 535 TRP SER PHE PRO GLY ILE GLY GLU PHE ILE CYS TYR ASP SEQRES 17 A 535 LYS TYR LEU GLN ALA ASP PHE LYS ALA ALA ALA ALA ALA SEQRES 18 A 535 VAL GLY HIS PRO GLU TRP GLU PHE PRO ASN ASP VAL GLY SEQRES 19 A 535 GLN TYR ASN ASP THR PRO GLU ARG THR GLN PHE PHE ARG SEQRES 20 A 535 ASP ASN GLY THR TYR LEU SER GLU LYS GLY ARG PHE PHE SEQRES 21 A 535 LEU ALA TRP TYR SER ASN ASN LEU ILE LYS HIS GLY ASP SEQRES 22 A 535 ARG ILE LEU ASP GLU ALA ASN LYS VAL PHE LEU GLY TYR SEQRES 23 A 535 LYS VAL GLN LEU ALA ILE LYS ILE SER GLY ILE HIS TRP SEQRES 24 A 535 TRP TYR LYS VAL PRO SER HIS ALA ALA GLU LEU THR ALA SEQRES 25 A 535 GLY TYR TYR ASN LEU HIS ASP ARG ASP GLY TYR ARG THR SEQRES 26 A 535 ILE ALA ARG MET LEU LYS ARG HIS ARG ALA SER ILE ASN SEQRES 27 A 535 PHE THR CYS ALA GLU MET ARG ASP SER GLU GLN SER SER SEQRES 28 A 535 GLN ALA MET SER ALA PRO GLU GLU LEU VAL GLN GLN VAL SEQRES 29 A 535 LEU SER ALA GLY TRP ARG GLU GLY LEU ASN VAL ALA CYS SEQRES 30 A 535 GLU ASN ALA LEU PRO ARG TYR ASP PRO THR ALA TYR ASN SEQRES 31 A 535 THR ILE LEU ARG ASN ALA ARG PRO HIS GLY ILE ASN GLN SEQRES 32 A 535 SER GLY PRO PRO GLU HIS LYS LEU PHE GLY PHE THR TYR SEQRES 33 A 535 LEU ARG LEU SER ASN GLN LEU VAL GLU GLY GLN ASN TYR SEQRES 34 A 535 VAL ASN PHE LYS THR PHE VAL ASP ARG MET HIS ALA ASN SEQRES 35 A 535 LEU PRO ARG ASP PRO TYR VAL ASP PRO MET ALA PRO LEU SEQRES 36 A 535 PRO ARG SER GLY PRO GLU ILE SER ILE GLU MET ILE LEU SEQRES 37 A 535 GLN ALA ALA GLN PRO LYS LEU GLN PRO PHE PRO PHE GLN SEQRES 38 A 535 GLU HIS THR ASP LEU PRO VAL GLY PRO THR GLY GLY MET SEQRES 39 A 535 GLY GLY GLN ALA GLU GLY PRO THR CYS GLY MET GLY GLY SEQRES 40 A 535 GLN VAL LYS GLY PRO THR GLY GLY MET GLY GLY GLN ALA SEQRES 41 A 535 GLU ASP PRO THR SER GLY MET GLY GLY GLU LEU PRO ALA SEQRES 42 A 535 THR MET HET SGJ A 601 11 HET GLC A 602 11 HET CL A 603 1 HETNAM SGJ 1,4-DIDEOXY-4-THIO-NOJIRIMYCIN HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 SGJ C6 H13 N O3 S FORMUL 3 GLC C6 H12 O6 FORMUL 4 CL CL 1- FORMUL 5 HOH *294(H2 O) HELIX 1 AA1 VAL A 5 TYR A 9 5 5 HELIX 2 AA2 LYS A 29 ALA A 43 1 15 HELIX 3 AA3 TRP A 54 GLU A 58 1 5 HELIX 4 AA4 TRP A 67 GLY A 81 1 15 HELIX 5 AA5 PRO A 106 THR A 114 1 9 HELIX 6 AA6 ARG A 115 ASP A 118 5 4 HELIX 7 AA7 LEU A 135 ASP A 138 5 4 HELIX 8 AA8 SER A 147 MET A 163 1 17 HELIX 9 AA9 MET A 163 ALA A 169 1 7 HELIX 10 AB1 GLY A 180 GLU A 184 5 5 HELIX 11 AB2 PRO A 191 GLY A 195 5 5 HELIX 12 AB3 ASP A 208 ALA A 221 1 14 HELIX 13 AB4 THR A 239 THR A 243 5 5 HELIX 14 AB5 GLY A 250 LEU A 253 5 4 HELIX 15 AB6 SER A 254 LEU A 284 1 31 HELIX 16 AB7 HIS A 306 GLY A 313 1 8 HELIX 17 AB8 TYR A 323 ARG A 332 1 10 HELIX 18 AB9 ARG A 345 GLN A 349 5 5 HELIX 19 AC1 SER A 350 MET A 354 5 5 HELIX 20 AC2 ALA A 356 GLU A 371 1 16 HELIX 21 AC3 ASP A 385 ARG A 397 1 13 HELIX 22 AC4 GLU A 425 HIS A 440 1 16 HELIX 23 AC5 SER A 463 GLN A 469 1 7 HELIX 24 AC6 ALA A 470 GLN A 472 5 3 SHEET 1 AA1 9 GLN A 11 MET A 15 0 SHEET 2 AA1 9 GLY A 47 TRP A 53 1 O MET A 49 N VAL A 14 SHEET 3 AA1 9 LYS A 83 SER A 89 1 O ILE A 87 N VAL A 50 SHEET 4 AA1 9 ILE A 172 VAL A 177 1 O GLU A 176 N MET A 88 SHEET 5 AA1 9 GLN A 289 LYS A 293 1 O ALA A 291 N VAL A 177 SHEET 6 AA1 9 SER A 336 PHE A 339 1 O SER A 336 N LEU A 290 SHEET 7 AA1 9 VAL A 375 GLU A 378 1 O ALA A 376 N ILE A 337 SHEET 8 AA1 9 GLY A 413 TYR A 416 1 O THR A 415 N CYS A 377 SHEET 9 AA1 9 GLN A 11 MET A 15 1 N TYR A 13 O TYR A 416 SHEET 1 AA2 2 PHE A 120 THR A 122 0 SHEET 2 AA2 2 ARG A 128 LEU A 133 -1 O ASN A 129 N TYR A 121 LINK S1 SGJ A 601 C1 GLC A 602 1555 1555 1.79 CISPEP 1 PHE A 198 PRO A 199 0 -1.41 CISPEP 2 LEU A 417 ARG A 418 0 5.85 CISPEP 3 GLN A 472 PRO A 473 0 -9.13 CRYST1 73.520 99.110 65.040 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013602 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010090 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015375 0.00000