HEADER ONCOPROTEIN 15-DEC-17 6FA2 TITLE ANTIBODY DERIVED (ABD-5) SMALL MOLECULE BINDING TO KRAS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GTPASE KRAS; COMPND 9 CHAIN: B, D, E, F; COMPND 10 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 OTHER_DETAILS: KRAS169 Q61H GPPNHP; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: GTPASE KRAS; COMPND 16 CHAIN: C; COMPND 17 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 18 ENGINEERED: YES; COMPND 19 MUTATION: YES; COMPND 20 OTHER_DETAILS: KRAS169 Q61H GPPNHP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: KRAS, KRAS2, RASK2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: KRAS, KRAS2, RASK2; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: KRAS, KRAS2, RASK2 KEYWDS ABD-5, INHIBITOR, KRAS, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.E.QUEVEDO,A.CRUZ-MIGONI,M.T.EHEBAUER,S.B.CARR,S.V.E.PHILLIPS, AUTHOR 2 T.H.RABBITTS REVDAT 1 05-SEP-18 6FA2 0 JRNL AUTH C.E.QUEVEDO,A.CRUZ-MIGONI,N.BERY,A.MILLER,T.TANAKA,D.PETCH, JRNL AUTH 2 C.J.R.BATAILLE,L.Y.W.LEE,P.S.FALLON,H.TULMIN,M.T.EHEBAUER, JRNL AUTH 3 N.FERNANDEZ-FUENTES,A.J.RUSSELL,S.B.CARR,S.E.V.PHILLIPS, JRNL AUTH 4 T.H.RABBITTS JRNL TITL SMALL MOLECULE INHIBITORS OF RAS-EFFECTOR PROTEIN JRNL TITL 2 INTERACTIONS DERIVED USING AN INTRACELLULAR ANTIBODY JRNL TITL 3 FRAGMENT. JRNL REF NAT COMMUN V. 9 3169 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30093669 JRNL DOI 10.1038/S41467-018-05707-2 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 93.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 34830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1723 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2543 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.3940 REMARK 3 BIN FREE R VALUE SET COUNT : 126 REMARK 3 BIN FREE R VALUE : 0.3870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7700 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 402 REMARK 3 SOLVENT ATOMS : 28 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.24000 REMARK 3 B22 (A**2) : 9.14000 REMARK 3 B33 (A**2) : -5.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.023 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.298 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.269 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.101 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8262 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7488 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11196 ; 1.702 ; 2.013 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17322 ; 0.947 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 972 ; 5.504 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 379 ;41.094 ;24.433 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1392 ;15.904 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;14.841 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1239 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8999 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1680 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3912 ; 4.959 ; 6.025 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3911 ; 4.958 ; 6.024 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4867 ; 7.504 ; 9.015 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4868 ; 7.504 ; 9.016 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4350 ; 6.084 ; 6.986 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4351 ; 6.083 ; 6.986 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6327 ; 9.577 ;10.184 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8917 ;12.233 ;71.755 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8918 ;12.232 ;71.754 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 15 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 166 B 1 166 10200 0.06 0.05 REMARK 3 2 A 1 167 C 1 167 10020 0.05 0.05 REMARK 3 3 A 1 167 D 1 167 9830 0.05 0.05 REMARK 3 4 A 1 167 E 1 167 9940 0.06 0.05 REMARK 3 5 A 1 167 F 1 167 9668 0.06 0.05 REMARK 3 6 B -2 167 C -2 167 10218 0.04 0.05 REMARK 3 7 B -2 167 D -2 167 9984 0.04 0.05 REMARK 3 8 B -2 167 E -2 167 10170 0.06 0.05 REMARK 3 9 B -2 167 F -2 167 9928 0.05 0.05 REMARK 3 10 C -2 167 D -2 167 9942 0.04 0.05 REMARK 3 11 C -2 167 E -2 167 9994 0.05 0.05 REMARK 3 12 C -2 167 F -2 167 9838 0.05 0.05 REMARK 3 13 D -2 167 E -2 167 9856 0.05 0.05 REMARK 3 14 D -2 167 F -2 167 9930 0.04 0.05 REMARK 3 15 E -2 167 F -2 167 9792 0.05 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FA2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007893. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36640 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 93.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8-15% W/V POLYETHYLENE GLYCOL 3350 AND REMARK 280 0.2M LITHIUM CITRATE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.61500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.22300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.60750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.22300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.61500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.60750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 63 REMARK 465 TYR B 64 REMARK 465 ILE C 36 REMARK 465 GLU C 37 REMARK 465 HIS C 61 REMARK 465 GLU C 62 REMARK 465 GLU C 63 REMARK 465 TYR C 64 REMARK 465 ASP D 33 REMARK 465 PRO D 34 REMARK 465 THR D 35 REMARK 465 ILE D 36 REMARK 465 GLU D 37 REMARK 465 HIS D 61 REMARK 465 GLU D 62 REMARK 465 GLU D 63 REMARK 465 TYR D 64 REMARK 465 SER D 65 REMARK 465 ALA D 66 REMARK 465 MET D 67 REMARK 465 HIS E 61 REMARK 465 GLU E 62 REMARK 465 GLU E 63 REMARK 465 TYR E 64 REMARK 465 SER E 65 REMARK 465 ALA E 66 REMARK 465 TYR F 32 REMARK 465 ASP F 33 REMARK 465 PRO F 34 REMARK 465 THR F 35 REMARK 465 ILE F 36 REMARK 465 GLU F 37 REMARK 465 HIS F 61 REMARK 465 GLU F 62 REMARK 465 GLU F 63 REMARK 465 TYR F 64 REMARK 465 SER F 65 REMARK 465 ALA F 66 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 61 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 MET B 67 CG SD CE REMARK 470 ARG B 68 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 88 CE NZ REMARK 470 ARG B 135 NE CZ NH1 NH2 REMARK 470 GLU C 49 CG CD OE1 OE2 REMARK 470 MET C 67 CG SD CE REMARK 470 ARG C 68 NE CZ NH1 NH2 REMARK 470 LYS C 101 CD CE NZ REMARK 470 ARG C 102 CD NE CZ NH1 NH2 REMARK 470 GLU D 49 CG CD OE1 OE2 REMARK 470 ARG D 68 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 31 CG CD OE1 OE2 REMARK 470 MET E 67 CG SD CE REMARK 470 ARG E 68 CG CD NE CZ NH1 NH2 REMARK 470 GLN E 70 CG CD OE1 NE2 REMARK 470 ARG E 73 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 101 CG CD CE NZ REMARK 470 GLU E 107 CG CD OE1 OE2 REMARK 470 MET F 67 CG SD CE REMARK 470 ARG F 68 CG CD NE CZ NH1 NH2 REMARK 470 GLN F 70 CG CD OE1 NE2 REMARK 470 ARG F 102 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 74 O7 D2W A 203 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER D 106 OD1 ASP E 132 3755 1.78 REMARK 500 O SER B 65 N32 D2W A 203 1455 1.91 REMARK 500 N SER C 65 C24 D2W E 203 1655 1.94 REMARK 500 O SER B 65 C34 D2W A 203 1455 2.00 REMARK 500 OD2 ASP B 105 OE2 GLU C 3 1455 2.16 REMARK 500 OD2 ASP B 105 CD GLU C 3 1455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 72 CB - CG - SD ANGL. DEV. = 22.2 DEGREES REMARK 500 MET A 72 CG - SD - CE ANGL. DEV. = -9.9 DEGREES REMARK 500 ARG B 123 CG - CD - NE ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG B 123 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP F 126 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -63.72 -96.39 REMARK 500 HIS A 61 80.05 -67.46 REMARK 500 GLU A 63 -167.10 -64.15 REMARK 500 LYS A 117 32.86 71.20 REMARK 500 SER A 122 47.05 -82.66 REMARK 500 ILE B 36 -64.36 -95.78 REMARK 500 HIS B 61 93.94 -68.97 REMARK 500 LYS B 117 32.63 70.89 REMARK 500 SER B 122 49.18 -84.81 REMARK 500 ARG B 149 -0.05 79.51 REMARK 500 LYS C 117 32.36 71.00 REMARK 500 SER C 122 47.09 -82.59 REMARK 500 ARG C 149 -0.30 79.87 REMARK 500 LYS D 117 32.97 70.62 REMARK 500 SER D 122 45.93 -81.82 REMARK 500 ARG D 149 -0.43 79.62 REMARK 500 ILE E 36 -62.72 -95.21 REMARK 500 LYS E 117 32.55 70.24 REMARK 500 SER E 122 46.09 -80.80 REMARK 500 ARG E 149 -0.38 79.74 REMARK 500 LYS F 117 32.93 70.72 REMARK 500 SER F 122 47.58 -81.46 REMARK 500 ARG F 149 -0.21 79.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 82.4 REMARK 620 3 GNP A 202 O2B 93.6 168.4 REMARK 620 4 HOH A 304 O 83.3 92.3 76.4 REMARK 620 5 GNP A 202 O2G 166.7 85.5 97.2 91.7 REMARK 620 6 HOH A 301 O 88.8 93.2 97.6 169.7 97.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 THR B 35 OG1 76.4 REMARK 620 3 GNP B 202 O2G 166.4 92.0 REMARK 620 4 HOH B 301 O 87.7 96.6 100.7 REMARK 620 5 GNP B 202 O2B 89.4 163.6 101.1 90.7 REMARK 620 6 HOH B 303 O 80.1 85.0 92.2 167.0 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 17 OG REMARK 620 2 THR C 35 OG1 74.7 REMARK 620 3 GNP C 202 O1G 163.2 94.0 REMARK 620 4 GNP C 202 O1B 88.8 135.0 90.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 17 OG REMARK 620 2 GNP D 202 O2G 115.1 REMARK 620 3 GNP D 202 O2B 68.0 67.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER E 17 OG REMARK 620 2 THR E 35 OG1 99.4 REMARK 620 3 GNP E 202 O1G 115.4 69.1 REMARK 620 4 GNP E 202 O1B 77.2 133.3 70.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER F 17 OG REMARK 620 2 GNP F 202 O1B 73.1 REMARK 620 3 GNP F 202 O1G 128.6 72.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D2W A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D2W B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D2W C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D2W D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D2W E 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP F 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D2W F 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OCO RELATED DB: PDB REMARK 900 5OCO CONTAINS THE SAME PROTEIN COMPLEX WITH ABD-2 REMARK 900 RELATED ID: 5OCT RELATED DB: PDB REMARK 900 5OCT CONTAINS THE SAME PROTEIN COMPLEX WITH ABD-3 REMARK 900 RELATED ID: 5OCG RELATED DB: PDB REMARK 900 5OCG CONTAINS THE ABD-3 LIGAND IN COMPLEX WITH A DIFFERENT KRAS REMARK 900 PROTEIN (G12D MUTANT) REMARK 900 RELATED ID: 6F76 RELATED DB: PDB REMARK 900 6F76 CONTAINS THE SAME PROTEIN COMPLEX WITH ABD-8 DBREF 6FA2 A 1 167 UNP P01116 RASK_HUMAN 1 167 DBREF 6FA2 B 1 167 UNP P01116 RASK_HUMAN 1 167 DBREF 6FA2 C 1 167 UNP P01116 RASK_HUMAN 1 167 DBREF 6FA2 D 1 167 UNP P01116 RASK_HUMAN 1 167 DBREF 6FA2 E 1 167 UNP P01116 RASK_HUMAN 1 167 DBREF 6FA2 F 1 167 UNP P01116 RASK_HUMAN 1 167 SEQADV 6FA2 HIS A 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA2 PHE B -2 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLN B -1 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLY B 0 UNP P01116 EXPRESSION TAG SEQADV 6FA2 HIS B 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA2 TYR C -3 UNP P01116 EXPRESSION TAG SEQADV 6FA2 PHE C -2 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLN C -1 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLY C 0 UNP P01116 EXPRESSION TAG SEQADV 6FA2 HIS C 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA2 PHE D -2 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLN D -1 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLY D 0 UNP P01116 EXPRESSION TAG SEQADV 6FA2 HIS D 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA2 PHE E -2 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLN E -1 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLY E 0 UNP P01116 EXPRESSION TAG SEQADV 6FA2 HIS E 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA2 PHE F -2 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLN F -1 UNP P01116 EXPRESSION TAG SEQADV 6FA2 GLY F 0 UNP P01116 EXPRESSION TAG SEQADV 6FA2 HIS F 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQRES 1 A 167 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 A 167 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 167 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 167 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 167 LEU ASP ILE LEU ASP THR ALA GLY HIS GLU GLU TYR SER SEQRES 6 A 167 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 167 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 167 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 167 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 167 CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 A 167 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 A 167 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 A 167 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS SEQRES 1 B 170 PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY SEQRES 2 B 170 ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU SEQRES 3 B 170 ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE SEQRES 4 B 170 GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU SEQRES 5 B 170 THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS GLU SEQRES 6 B 170 GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY SEQRES 7 B 170 GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SEQRES 8 B 170 SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS SEQRES 9 B 170 ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL SEQRES 10 B 170 GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR SEQRES 11 B 170 LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO SEQRES 12 B 170 PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP SEQRES 13 B 170 ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS SEQRES 14 B 170 LYS SEQRES 1 C 171 TYR PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 C 171 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 C 171 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 C 171 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 C 171 GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 C 171 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 C 171 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 C 171 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 C 171 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 C 171 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 C 171 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 C 171 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 C 171 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 C 171 HIS LYS SEQRES 1 D 170 PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY SEQRES 2 D 170 ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU SEQRES 3 D 170 ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE SEQRES 4 D 170 GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU SEQRES 5 D 170 THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS GLU SEQRES 6 D 170 GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY SEQRES 7 D 170 GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SEQRES 8 D 170 SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS SEQRES 9 D 170 ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL SEQRES 10 D 170 GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR SEQRES 11 D 170 LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO SEQRES 12 D 170 PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP SEQRES 13 D 170 ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS SEQRES 14 D 170 LYS SEQRES 1 E 170 PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY SEQRES 2 E 170 ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU SEQRES 3 E 170 ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE SEQRES 4 E 170 GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU SEQRES 5 E 170 THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS GLU SEQRES 6 E 170 GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY SEQRES 7 E 170 GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SEQRES 8 E 170 SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS SEQRES 9 E 170 ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL SEQRES 10 E 170 GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR SEQRES 11 E 170 LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO SEQRES 12 E 170 PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP SEQRES 13 E 170 ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS SEQRES 14 E 170 LYS SEQRES 1 F 170 PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY SEQRES 2 F 170 ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU SEQRES 3 F 170 ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE SEQRES 4 F 170 GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU SEQRES 5 F 170 THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS GLU SEQRES 6 F 170 GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY SEQRES 7 F 170 GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SEQRES 8 F 170 SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS SEQRES 9 F 170 ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL SEQRES 10 F 170 GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR SEQRES 11 F 170 LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO SEQRES 12 F 170 PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP SEQRES 13 F 170 ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS SEQRES 14 F 170 LYS HET MG A 201 1 HET GNP A 202 32 HET D2W A 203 34 HET MG B 201 1 HET GNP B 202 32 HET D2W B 203 34 HET MG C 201 1 HET GNP C 202 32 HET D2W C 203 34 HET MG D 201 1 HET GNP D 202 32 HET D2W D 203 34 HET MG E 201 1 HET GNP E 202 32 HET D2W E 203 34 HET MG F 201 1 HET GNP F 202 32 HET D2W F 203 34 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM D2W 4-[2-(DIMETHYLAMINO)ETHOXY]-~{N}-[[(3~{R})-5-(6- HETNAM 2 D2W METHOXYPYRIDIN-2-YL)-2,3-DIHYDRO-1,4-BENZODIOXIN-3- HETNAM 3 D2W YL]METHYL]BENZAMIDE FORMUL 7 MG 6(MG 2+) FORMUL 8 GNP 6(C10 H17 N6 O13 P3) FORMUL 9 D2W 6(C26 H29 N3 O5) FORMUL 25 HOH *28(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 SER A 65 GLY A 75 1 11 HELIX 3 AA3 ASN A 86 ASP A 92 1 7 HELIX 4 AA4 ASP A 92 ASP A 105 1 14 HELIX 5 AA5 ASP A 126 GLY A 138 1 13 HELIX 6 AA6 GLY A 151 LYS A 167 1 17 HELIX 7 AA7 GLY B 15 ASN B 26 1 12 HELIX 8 AA8 ALA B 66 GLY B 75 1 10 HELIX 9 AA9 ASN B 86 ASP B 92 1 7 HELIX 10 AB1 ASP B 92 ASP B 105 1 14 HELIX 11 AB2 ASP B 126 GLY B 138 1 13 HELIX 12 AB3 GLY B 151 LYS B 167 1 17 HELIX 13 AB4 GLY C 15 ASN C 26 1 12 HELIX 14 AB5 ALA C 66 GLY C 75 1 10 HELIX 15 AB6 ASN C 86 ASP C 92 1 7 HELIX 16 AB7 ASP C 92 ASP C 105 1 14 HELIX 17 AB8 ASP C 126 GLY C 138 1 13 HELIX 18 AB9 GLY C 151 LYS C 167 1 17 HELIX 19 AC1 GLY D 15 ASN D 26 1 12 HELIX 20 AC2 ASP D 69 GLY D 75 1 7 HELIX 21 AC3 ASN D 86 ASP D 92 1 7 HELIX 22 AC4 ASP D 92 ASP D 105 1 14 HELIX 23 AC5 ASP D 126 GLY D 138 1 13 HELIX 24 AC6 GLY D 151 LYS D 167 1 17 HELIX 25 AC7 GLY E 15 ASN E 26 1 12 HELIX 26 AC8 ARG E 68 GLY E 75 1 8 HELIX 27 AC9 ASN E 86 ASP E 92 1 7 HELIX 28 AD1 ASP E 92 ASP E 105 1 14 HELIX 29 AD2 ASP E 126 GLY E 138 1 13 HELIX 30 AD3 GLY E 151 LYS E 167 1 17 HELIX 31 AD4 GLY F 15 ASN F 26 1 12 HELIX 32 AD5 ARG F 68 GLY F 75 1 8 HELIX 33 AD6 ASN F 86 ASP F 92 1 7 HELIX 34 AD7 ASP F 92 ASP F 105 1 14 HELIX 35 AD8 ASP F 126 GLY F 138 1 13 HELIX 36 AD9 GLY F 151 LYS F 167 1 17 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 THR A 2 VAL A 9 1 N LEU A 6 O LEU A 56 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 6 GLU B 37 ILE B 46 0 SHEET 2 AA2 6 GLU B 49 THR B 58 -1 O LEU B 53 N LYS B 42 SHEET 3 AA2 6 THR B 2 GLY B 10 1 N LEU B 6 O LEU B 56 SHEET 4 AA2 6 GLY B 77 ALA B 83 1 O LEU B 79 N VAL B 9 SHEET 5 AA2 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 AA2 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 SHEET 1 AA3 6 SER C 39 ILE C 46 0 SHEET 2 AA3 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42 SHEET 3 AA3 6 THR C 2 VAL C 9 1 N LEU C 6 O LEU C 56 SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O LEU C 79 N VAL C 9 SHEET 5 AA3 6 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 6 AA3 6 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 SHEET 1 AA4 6 SER D 39 ILE D 46 0 SHEET 2 AA4 6 GLU D 49 ASP D 57 -1 O LEU D 53 N LYS D 42 SHEET 3 AA4 6 THR D 2 VAL D 9 1 N LEU D 6 O LEU D 56 SHEET 4 AA4 6 GLY D 77 ALA D 83 1 O LEU D 79 N VAL D 9 SHEET 5 AA4 6 MET D 111 ASN D 116 1 O ASN D 116 N PHE D 82 SHEET 6 AA4 6 PHE D 141 GLU D 143 1 O ILE D 142 N LEU D 113 SHEET 1 AA5 6 GLU E 37 ILE E 46 0 SHEET 2 AA5 6 GLU E 49 THR E 58 -1 O LEU E 53 N LYS E 42 SHEET 3 AA5 6 THR E 2 GLY E 10 1 N LEU E 6 O LEU E 56 SHEET 4 AA5 6 GLY E 77 ALA E 83 1 O LEU E 79 N VAL E 9 SHEET 5 AA5 6 MET E 111 ASN E 116 1 O ASN E 116 N PHE E 82 SHEET 6 AA5 6 PHE E 141 GLU E 143 1 O ILE E 142 N LEU E 113 SHEET 1 AA6 6 SER F 39 ILE F 46 0 SHEET 2 AA6 6 GLU F 49 ASP F 57 -1 O LEU F 53 N LYS F 42 SHEET 3 AA6 6 THR F 2 VAL F 9 1 N LEU F 6 O LEU F 56 SHEET 4 AA6 6 GLY F 77 ALA F 83 1 O LEU F 79 N VAL F 9 SHEET 5 AA6 6 MET F 111 ASN F 116 1 O ASN F 116 N PHE F 82 SHEET 6 AA6 6 PHE F 141 GLU F 143 1 O ILE F 142 N LEU F 113 LINK OG SER A 17 MG MG A 201 1555 1555 2.09 LINK OG1 THR A 35 MG MG A 201 1555 1555 2.19 LINK OG SER B 17 MG MG B 201 1555 1555 2.35 LINK OG1 THR B 35 MG MG B 201 1555 1555 2.19 LINK OG SER C 17 MG MG C 201 1555 1555 2.26 LINK OG1 THR C 35 MG MG C 201 1555 1555 2.36 LINK OG SER D 17 MG MG D 201 1555 1555 2.68 LINK OG SER E 17 MG MG E 201 1555 1555 2.54 LINK OG1 THR E 35 MG MG E 201 1555 1555 2.35 LINK OG SER F 17 MG MG F 201 1555 1555 2.39 LINK MG MG A 201 O2B GNP A 202 1555 1555 2.02 LINK MG MG A 201 O HOH A 304 1555 1555 2.12 LINK MG MG A 201 O2G GNP A 202 1555 1555 1.94 LINK MG MG A 201 O HOH A 301 1555 1555 2.05 LINK MG MG B 201 O2G GNP B 202 1555 1555 1.93 LINK MG MG B 201 O HOH B 301 1555 1555 2.05 LINK MG MG B 201 O2B GNP B 202 1555 1555 2.10 LINK MG MG B 201 O HOH B 303 1555 1555 1.98 LINK MG MG C 201 O1G GNP C 202 1555 1555 2.02 LINK MG MG C 201 O1B GNP C 202 1555 1555 2.08 LINK MG MG D 201 O2G GNP D 202 1555 1555 2.56 LINK MG MG D 201 O2B GNP D 202 1555 1555 2.84 LINK MG MG E 201 O1G GNP E 202 1555 1555 2.45 LINK MG MG E 201 O1B GNP E 202 1555 1555 2.45 LINK MG MG F 201 O1B GNP F 202 1555 1555 2.74 LINK MG MG F 201 O1G GNP F 202 1555 1555 2.44 SITE 1 AC1 5 SER A 17 THR A 35 GNP A 202 HOH A 301 SITE 2 AC1 5 HOH A 304 SITE 1 AC2 24 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC2 24 SER A 17 ALA A 18 PHE A 28 VAL A 29 SITE 3 AC2 24 ASP A 30 TYR A 32 PRO A 34 THR A 35 SITE 4 AC2 24 GLY A 60 ASN A 116 LYS A 117 ASP A 119 SITE 5 AC2 24 LEU A 120 SER A 145 ALA A 146 LYS A 147 SITE 6 AC2 24 MG A 201 HOH A 301 HOH A 304 HOH A 308 SITE 1 AC3 12 LEU A 6 ARG A 41 ASP A 54 LEU A 56 SITE 2 AC3 12 GLN A 70 TYR A 71 THR A 74 SER B 65 SITE 3 AC3 12 ARG B 68 ASP B 69 GLN B 99 ARG B 102 SITE 1 AC4 5 SER B 17 THR B 35 GNP B 202 HOH B 301 SITE 2 AC4 5 HOH B 303 SITE 1 AC5 23 GLY B 12 GLY B 13 VAL B 14 GLY B 15 SITE 2 AC5 23 LYS B 16 SER B 17 ALA B 18 PHE B 28 SITE 3 AC5 23 VAL B 29 ASP B 30 TYR B 32 PRO B 34 SITE 4 AC5 23 THR B 35 GLY B 60 ASN B 116 LYS B 117 SITE 5 AC5 23 ASP B 119 LEU B 120 SER B 145 ALA B 146 SITE 6 AC5 23 MG B 201 HOH B 301 HOH B 303 SITE 1 AC6 8 LYS B 5 GLU B 37 SER B 39 TYR B 40 SITE 2 AC6 8 ASP B 54 ILE B 55 TYR B 71 THR B 74 SITE 1 AC7 4 SER C 17 THR C 35 ASP C 57 GNP C 202 SITE 1 AC8 22 GLY C 12 GLY C 13 VAL C 14 GLY C 15 SITE 2 AC8 22 LYS C 16 SER C 17 ALA C 18 PHE C 28 SITE 3 AC8 22 VAL C 29 ASP C 30 TYR C 32 PRO C 34 SITE 4 AC8 22 THR C 35 THR C 58 GLY C 60 ASN C 116 SITE 5 AC8 22 LYS C 117 ASP C 119 LEU C 120 SER C 145 SITE 6 AC8 22 ALA C 146 MG C 201 SITE 1 AC9 7 LYS A 5 ARG B 73 SER C 39 TYR C 40 SITE 2 AC9 7 ARG C 41 ASP C 54 THR C 74 SITE 1 AD1 4 SER D 17 ASP D 57 THR D 58 GNP D 202 SITE 1 AD2 20 GLY D 12 GLY D 13 VAL D 14 GLY D 15 SITE 2 AD2 20 LYS D 16 SER D 17 ALA D 18 PHE D 28 SITE 3 AD2 20 VAL D 29 ASP D 30 TYR D 32 GLY D 60 SITE 4 AD2 20 ASN D 116 LYS D 117 ASP D 119 LEU D 120 SITE 5 AD2 20 SER D 145 ALA D 146 LYS D 147 MG D 201 SITE 1 AD3 5 SER D 39 ASP D 54 LEU D 56 TYR D 71 SITE 2 AD3 5 THR D 74 SITE 1 AD4 5 SER E 17 THR E 35 ASP E 57 THR E 58 SITE 2 AD4 5 GNP E 202 SITE 1 AD5 23 GLY E 12 GLY E 13 VAL E 14 GLY E 15 SITE 2 AD5 23 LYS E 16 SER E 17 ALA E 18 PHE E 28 SITE 3 AD5 23 VAL E 29 ASP E 30 TYR E 32 PRO E 34 SITE 4 AD5 23 THR E 35 GLY E 60 ASN E 116 LYS E 117 SITE 5 AD5 23 ASP E 119 LEU E 120 SER E 145 ALA E 146 SITE 6 AD5 23 LYS E 147 MG E 201 HOH E 303 SITE 1 AD6 7 SER C 65 LYS E 5 VAL E 7 ARG E 41 SITE 2 AD6 7 ASP E 54 TYR E 71 THR E 74 SITE 1 AD7 4 SER F 17 ASP F 57 THR F 58 GNP F 202 SITE 1 AD8 19 GLY F 13 VAL F 14 GLY F 15 LYS F 16 SITE 2 AD8 19 SER F 17 ALA F 18 PHE F 28 VAL F 29 SITE 3 AD8 19 ASP F 30 GLU F 31 GLY F 60 ASN F 116 SITE 4 AD8 19 LYS F 117 ASP F 119 LEU F 120 SER F 145 SITE 5 AD8 19 ALA F 146 LYS F 147 MG F 201 SITE 1 AD9 10 ASP C 33 LYS F 5 VAL F 7 SER F 39 SITE 2 AD9 10 TYR F 40 ARG F 41 ASP F 54 ILE F 55 SITE 3 AD9 10 TYR F 71 THR F 74 CRYST1 63.230 117.215 156.446 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015815 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008531 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006392 0.00000