HEADER ONCOPROTEIN 15-DEC-17 6FA4 TITLE ANTIBODY DERIVED (ABD-7) SMALL MOLECULE BINDING TO KRAS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: KRAS169 Q61H GPPNHP; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: GTPASE KRAS; COMPND 10 CHAIN: A, C, D, E, F; COMPND 11 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: KRAS, KRAS2, RASK2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ABD-4, INHIBITOR, KRAS, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.E.QUEVEDO,A.CRUZ-MIGONI,M.T.EHEBAUER,S.B.CARR,S.V.E.PHILLIPS, AUTHOR 2 T.H.RABBITTS REVDAT 2 17-JAN-24 6FA4 1 LINK REVDAT 1 22-AUG-18 6FA4 0 JRNL AUTH C.E.QUEVEDO,A.CRUZ-MIGONI,N.BERY,A.MILLER,T.TANAKA,D.PETCH, JRNL AUTH 2 C.J.R.BATAILLE,L.Y.W.LEE,P.S.FALLON,H.TULMIN,M.T.EHEBAUER, JRNL AUTH 3 N.FERNANDEZ-FUENTES,A.J.RUSSELL,S.B.CARR,S.E.V.PHILLIPS, JRNL AUTH 4 T.H.RABBITTS JRNL TITL SMALL MOLECULE INHIBITORS OF RAS-EFFECTOR PROTEIN JRNL TITL 2 INTERACTIONS DERIVED USING AN INTRACELLULAR ANTIBODY JRNL TITL 3 FRAGMENT. JRNL REF NAT COMMUN V. 9 3169 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30093669 JRNL DOI 10.1038/S41467-018-05707-2 REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 69712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3662 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5411 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 300 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8075 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 343 REMARK 3 SOLVENT ATOMS : 136 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.210 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.382 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8696 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7890 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11806 ; 1.900 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 18285 ; 1.010 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1040 ; 5.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 419 ;43.960 ;24.368 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1495 ;14.403 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;17.601 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1287 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10172 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1788 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4124 ; 3.544 ; 3.412 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4123 ; 3.542 ; 3.412 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5158 ; 4.931 ; 5.082 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5159 ; 4.931 ; 5.083 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4572 ; 4.685 ; 4.063 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4573 ; 4.684 ; 4.064 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 6643 ; 7.167 ; 5.861 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9217 ; 9.025 ;40.027 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9214 ; 9.026 ;40.030 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 15 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B -3 167 A -3 167 10580 0.08 0.05 REMARK 3 2 B -3 168 C -3 168 10636 0.06 0.05 REMARK 3 3 B -3 167 D -3 167 10508 0.07 0.05 REMARK 3 4 B -3 168 E -3 168 10526 0.08 0.05 REMARK 3 5 B -3 168 F -3 168 10598 0.06 0.05 REMARK 3 6 A -3 168 C -3 168 10628 0.07 0.05 REMARK 3 7 A -3 167 D -3 167 10560 0.07 0.05 REMARK 3 8 A -3 168 E -3 168 10510 0.08 0.05 REMARK 3 9 A -3 168 F -3 168 10584 0.07 0.05 REMARK 3 10 C -3 167 D -3 167 10598 0.05 0.05 REMARK 3 11 C -3 168 E -3 168 10652 0.07 0.05 REMARK 3 12 C -3 168 F -3 168 10752 0.05 0.05 REMARK 3 13 D -3 167 E -3 167 10604 0.07 0.05 REMARK 3 14 D -3 166 F -3 166 10594 0.06 0.05 REMARK 3 15 E -3 168 F -3 168 10718 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FA4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1200007994. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73612 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 65.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5OCO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8-15% W/V POLYETHYLENE GLYCOL 3350 AND REMARK 280 0.2M LITHIUM CITRATE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.85200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.66450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.30950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.66450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.85200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.30950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 169 REMARK 465 GLU C 62 REMARK 465 GLU C 63 REMARK 465 TYR C 64 REMARK 465 LYS C 169 REMARK 465 GLU D 62 REMARK 465 GLU D 63 REMARK 465 TYR D 64 REMARK 465 SER D 65 REMARK 465 GLU D 168 REMARK 465 LYS D 169 REMARK 465 GLU E 62 REMARK 465 GLU E 63 REMARK 465 TYR E 64 REMARK 465 LYS E 169 REMARK 465 GLU F 62 REMARK 465 GLU F 63 REMARK 465 TYR F 64 REMARK 465 SER F 65 REMARK 465 LYS F 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 GLN A 70 CD OE1 NE2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 MET C 67 CG SD CE REMARK 470 LYS D 167 CD CE NZ REMARK 470 MET E 67 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 1 CB - CG - SD ANGL. DEV. = 22.1 DEGREES REMARK 500 ARG B 41 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 102 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 149 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 MET A 67 CG - SD - CE ANGL. DEV. = 10.0 DEGREES REMARK 500 MET A 72 CG - SD - CE ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG A 97 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 MET C 1 CG - SD - CE ANGL. DEV. = -11.3 DEGREES REMARK 500 LEU C 52 CA - CB - CG ANGL. DEV. = 17.4 DEGREES REMARK 500 ARG C 97 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 149 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG D 68 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG D 149 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG E 102 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG E 123 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ASP E 126 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG E 149 NE - CZ - NH1 ANGL. DEV. = 7.6 DEGREES REMARK 500 MET F 1 CB - CG - SD ANGL. DEV. = 19.8 DEGREES REMARK 500 GLU F 3 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP F 126 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP F 126 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG F 149 NE - CZ - NH1 ANGL. DEV. = 7.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 122 49.38 -95.67 REMARK 500 ARG B 149 -0.91 76.82 REMARK 500 ILE A 36 -67.09 -91.69 REMARK 500 GLU A 63 150.18 -40.32 REMARK 500 TYR A 64 117.39 -33.13 REMARK 500 SER A 122 40.66 -89.34 REMARK 500 ASP C 108 70.92 -119.60 REMARK 500 SER C 122 42.89 -91.12 REMARK 500 ARG C 149 -0.71 77.84 REMARK 500 ILE D 36 -68.42 -90.12 REMARK 500 SER D 122 42.54 -87.86 REMARK 500 ARG D 149 -0.52 76.39 REMARK 500 ILE E 36 -68.16 -90.81 REMARK 500 SER E 122 42.73 -89.72 REMARK 500 ARG E 149 -0.06 76.93 REMARK 500 ILE F 36 -71.91 -89.78 REMARK 500 SER F 122 45.71 -91.91 REMARK 500 ARG F 149 -1.59 77.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 THR B 35 OG1 80.8 REMARK 620 3 GNP B 202 O2G 170.1 89.6 REMARK 620 4 GNP B 202 O2B 94.7 174.6 94.7 REMARK 620 5 HOH B 310 O 84.2 85.8 92.8 90.7 REMARK 620 6 HOH B 317 O 90.3 92.0 92.5 91.1 174.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 84.4 REMARK 620 3 GNP A 202 O2B 93.3 176.9 REMARK 620 4 GNP A 202 O2G 171.7 88.3 93.8 REMARK 620 5 HOH A 309 O 83.4 88.6 89.1 92.6 REMARK 620 6 HOH A 317 O 90.8 95.7 86.4 93.8 172.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 17 OG REMARK 620 2 THR C 35 OG1 77.7 REMARK 620 3 GNP C 202 O1G 159.6 82.5 REMARK 620 4 GNP C 202 O1B 101.0 175.3 98.4 REMARK 620 5 HOH C 305 O 85.2 83.2 87.7 92.2 REMARK 620 6 HOH C 306 O 89.1 89.2 95.5 95.4 171.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 17 OG REMARK 620 2 THR D 35 OG1 78.9 REMARK 620 3 GNP D 201 O2G 159.3 89.6 REMARK 620 4 GNP D 201 O2B 102.3 172.3 86.9 REMARK 620 5 HOH D 301 O 97.5 96.3 100.8 91.1 REMARK 620 6 HOH D 302 O 83.2 78.2 77.6 94.4 174.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER E 17 OG REMARK 620 2 THR E 35 OG1 73.2 REMARK 620 3 GNP E 202 O1G 163.0 90.8 REMARK 620 4 GNP E 202 O1B 96.5 169.2 99.1 REMARK 620 5 HOH E 303 O 84.5 86.7 100.4 95.7 REMARK 620 6 HOH E 304 O 82.5 83.1 90.2 92.5 165.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER F 17 OG REMARK 620 2 THR F 35 OG1 77.1 REMARK 620 3 GNP F 202 O1B 101.2 174.5 REMARK 620 4 GNP F 202 O1G 162.2 85.6 95.7 REMARK 620 5 HOH F 301 O 90.6 82.1 103.2 91.2 REMARK 620 6 HOH F 309 O 87.0 86.8 87.9 87.9 168.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D1W B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D1W A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D1W A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D1W D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP F 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D1W F 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OCO RELATED DB: PDB REMARK 900 5OCO CONTAINS THE SAME PROTEIN COMPLEXED WITH ABD-2 REMARK 900 RELATED ID: 5OCT RELATED DB: PDB REMARK 900 5OCT CONTAINS THE SAME PROTEIN COMPLEXED WITH ABD-3 REMARK 900 RELATED ID: 5OCG RELATED DB: PDB REMARK 900 5OCG CONTAINS ABD-3 LIGAND, SAME AS 5OCT BUT IN A DIFFERENT KRAS REMARK 900 COMPLEX (G12D MUTANT) REMARK 900 RELATED ID: 6F76 RELATED DB: PDB REMARK 900 6F76 CONTAINS THE SAME PROTEIN COMPLEXED WITH ABD-8 DBREF 6FA4 B 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6FA4 A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6FA4 C 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6FA4 D 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6FA4 E 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 6FA4 F 1 169 UNP P01116 RASK_HUMAN 1 169 SEQADV 6FA4 ALA B -3 UNP P01116 EXPRESSION TAG SEQADV 6FA4 PHE B -2 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLN B -1 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLY B 0 UNP P01116 EXPRESSION TAG SEQADV 6FA4 HIS B 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA4 ALA A -3 UNP P01116 EXPRESSION TAG SEQADV 6FA4 PHE A -2 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLN A -1 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 6FA4 HIS A 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA4 ALA C -3 UNP P01116 EXPRESSION TAG SEQADV 6FA4 PHE C -2 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLN C -1 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLY C 0 UNP P01116 EXPRESSION TAG SEQADV 6FA4 HIS C 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA4 ALA D -3 UNP P01116 EXPRESSION TAG SEQADV 6FA4 PHE D -2 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLN D -1 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLY D 0 UNP P01116 EXPRESSION TAG SEQADV 6FA4 HIS D 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA4 ALA E -3 UNP P01116 EXPRESSION TAG SEQADV 6FA4 PHE E -2 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLN E -1 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLY E 0 UNP P01116 EXPRESSION TAG SEQADV 6FA4 HIS E 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQADV 6FA4 ALA F -3 UNP P01116 EXPRESSION TAG SEQADV 6FA4 PHE F -2 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLN F -1 UNP P01116 EXPRESSION TAG SEQADV 6FA4 GLY F 0 UNP P01116 EXPRESSION TAG SEQADV 6FA4 HIS F 61 UNP P01116 GLN 61 ENGINEERED MUTATION SEQRES 1 B 173 ALA PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 B 173 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 B 173 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 B 173 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 B 173 GLU THR CSO LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 B 173 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 B 173 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 B 173 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 B 173 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 B 173 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 B 173 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 B 173 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 B 173 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 B 173 HIS LYS GLU LYS SEQRES 1 A 173 ALA PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 A 173 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 A 173 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 A 173 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 A 173 GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 A 173 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 A 173 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 A 173 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 A 173 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 A 173 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 A 173 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 A 173 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 A 173 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 A 173 HIS LYS GLU LYS SEQRES 1 C 173 ALA PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 C 173 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 C 173 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 C 173 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 C 173 GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 C 173 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 C 173 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 C 173 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 C 173 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 C 173 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 C 173 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 C 173 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 C 173 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 C 173 HIS LYS GLU LYS SEQRES 1 D 173 ALA PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 D 173 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 D 173 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 D 173 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 D 173 GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 D 173 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 D 173 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 D 173 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 D 173 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 D 173 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 D 173 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 D 173 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 D 173 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 D 173 HIS LYS GLU LYS SEQRES 1 E 173 ALA PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 E 173 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 E 173 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 E 173 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 E 173 GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 E 173 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 E 173 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 E 173 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 E 173 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 E 173 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 E 173 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 E 173 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 E 173 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 E 173 HIS LYS GLU LYS SEQRES 1 F 173 ALA PHE GLN GLY MET THR GLU TYR LYS LEU VAL VAL VAL SEQRES 2 F 173 GLY ALA GLY GLY VAL GLY LYS SER ALA LEU THR ILE GLN SEQRES 3 F 173 LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR SEQRES 4 F 173 ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY SEQRES 5 F 173 GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY HIS SEQRES 6 F 173 GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG THR SEQRES 7 F 173 GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN THR SEQRES 8 F 173 LYS SER PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE SEQRES 9 F 173 LYS ARG VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU SEQRES 10 F 173 VAL GLY ASN LYS CYS ASP LEU PRO SER ARG THR VAL ASP SEQRES 11 F 173 THR LYS GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE SEQRES 12 F 173 PRO PHE ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL SEQRES 13 F 173 ASP ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS SEQRES 14 F 173 HIS LYS GLU LYS MODRES 6FA4 CSO B 51 CYS MODIFIED RESIDUE HET CSO B 51 7 HET MG B 201 1 HET GNP B 202 32 HET D1W B 203 29 HET MG A 201 1 HET GNP A 202 32 HET D1W A 203 29 HET D1W A 204 29 HET MG C 201 1 HET GNP C 202 32 HET GNP D 201 32 HET MG D 202 1 HET D1W D 203 29 HET MG E 201 1 HET GNP E 202 32 HET MG F 201 1 HET GNP F 202 32 HET D1W F 203 29 HETNAM CSO S-HYDROXYCYSTEINE HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM D1W 6-(2,3-DIHYDRO-1,4-BENZODIOXIN-5-YL)-~{N}-[4- HETNAM 2 D1W [(DIMETHYLAMINO)METHYL]PHENYL]-2-METHOXY-PYRIDIN-3- HETNAM 3 D1W AMINE FORMUL 1 CSO C3 H7 N O3 S FORMUL 7 MG 6(MG 2+) FORMUL 8 GNP 6(C10 H17 N6 O13 P3) FORMUL 9 D1W 5(C23 H25 N3 O3) FORMUL 24 HOH *136(H2 O) HELIX 1 AA1 GLY B 15 ASN B 26 1 12 HELIX 2 AA2 TYR B 64 GLY B 75 1 12 HELIX 3 AA3 ASN B 86 ASP B 105 1 20 HELIX 4 AA4 ASP B 126 GLY B 138 1 13 HELIX 5 AA5 GLY B 151 LYS B 169 1 19 HELIX 6 AA6 GLY A 15 ASN A 26 1 12 HELIX 7 AA7 SER A 65 GLY A 75 1 11 HELIX 8 AA8 ASN A 86 ASP A 105 1 20 HELIX 9 AA9 ASP A 126 GLY A 138 1 13 HELIX 10 AB1 GLY A 151 GLU A 168 1 18 HELIX 11 AB2 GLY C 15 ASN C 26 1 12 HELIX 12 AB3 ALA C 66 GLY C 75 1 10 HELIX 13 AB4 ASN C 86 ASP C 105 1 20 HELIX 14 AB5 ASP C 126 GLY C 138 1 13 HELIX 15 AB6 GLY C 151 GLU C 168 1 18 HELIX 16 AB7 GLY D 15 ASN D 26 1 12 HELIX 17 AB8 MET D 67 GLY D 75 1 9 HELIX 18 AB9 ASN D 86 ASP D 92 1 7 HELIX 19 AC1 ASP D 92 ASP D 105 1 14 HELIX 20 AC2 ASP D 126 GLY D 138 1 13 HELIX 21 AC3 GLY D 151 LYS D 167 1 17 HELIX 22 AC4 GLY E 15 ASN E 26 1 12 HELIX 23 AC5 ALA E 66 GLY E 75 1 10 HELIX 24 AC6 ASN E 86 ASP E 92 1 7 HELIX 25 AC7 ASP E 92 ASP E 105 1 14 HELIX 26 AC8 ASP E 126 GLY E 138 1 13 HELIX 27 AC9 GLY E 151 GLU E 168 1 18 HELIX 28 AD1 GLY F 15 ASN F 26 1 12 HELIX 29 AD2 MET F 67 GLY F 75 1 9 HELIX 30 AD3 ASN F 86 ASP F 92 1 7 HELIX 31 AD4 ASP F 92 ASP F 105 1 14 HELIX 32 AD5 ASP F 126 GLY F 138 1 13 HELIX 33 AD6 GLY F 151 GLU F 168 1 18 SHEET 1 AA1 6 GLU B 37 ILE B 46 0 SHEET 2 AA1 6 GLU B 49 THR B 58 -1 O CSO B 51 N VAL B 44 SHEET 3 AA1 6 THR B 2 GLY B 10 1 N TYR B 4 O ASP B 54 SHEET 4 AA1 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 AA1 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 AA1 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 SHEET 1 AA2 6 GLU A 37 ILE A 46 0 SHEET 2 AA2 6 GLU A 49 THR A 58 -1 O CYS A 51 N VAL A 44 SHEET 3 AA2 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA2 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA2 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA2 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA3 6 GLU C 37 ILE C 46 0 SHEET 2 AA3 6 GLU C 49 THR C 58 -1 O CYS C 51 N VAL C 44 SHEET 3 AA3 6 THR C 2 GLY C 10 1 N LEU C 6 O ASP C 54 SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA3 6 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 6 AA3 6 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 SHEET 1 AA4 6 GLU D 37 ILE D 46 0 SHEET 2 AA4 6 GLU D 49 THR D 58 -1 O CYS D 51 N VAL D 44 SHEET 3 AA4 6 THR D 2 GLY D 10 1 N TYR D 4 O ASP D 54 SHEET 4 AA4 6 GLY D 77 ALA D 83 1 O VAL D 81 N VAL D 9 SHEET 5 AA4 6 MET D 111 ASN D 116 1 O ASN D 116 N PHE D 82 SHEET 6 AA4 6 PHE D 141 GLU D 143 1 O ILE D 142 N LEU D 113 SHEET 1 AA5 6 GLU E 37 ILE E 46 0 SHEET 2 AA5 6 GLU E 49 THR E 58 -1 O CYS E 51 N VAL E 44 SHEET 3 AA5 6 THR E 2 GLY E 10 1 N TYR E 4 O ASP E 54 SHEET 4 AA5 6 GLY E 77 ALA E 83 1 O VAL E 81 N VAL E 9 SHEET 5 AA5 6 MET E 111 ASN E 116 1 O ASN E 116 N PHE E 82 SHEET 6 AA5 6 PHE E 141 GLU E 143 1 O ILE E 142 N LEU E 113 SHEET 1 AA6 6 GLU F 37 ILE F 46 0 SHEET 2 AA6 6 GLU F 49 THR F 58 -1 O CYS F 51 N VAL F 44 SHEET 3 AA6 6 THR F 2 GLY F 10 1 N TYR F 4 O ASP F 54 SHEET 4 AA6 6 GLY F 77 ALA F 83 1 O VAL F 81 N VAL F 9 SHEET 5 AA6 6 MET F 111 ASN F 116 1 O ASN F 116 N PHE F 82 SHEET 6 AA6 6 PHE F 141 GLU F 143 1 O ILE F 142 N LEU F 113 LINK C THR B 50 N CSO B 51 1555 1555 1.33 LINK C CSO B 51 N LEU B 52 1555 1555 1.33 LINK OG SER B 17 MG MG B 201 1555 1555 2.16 LINK OG1 THR B 35 MG MG B 201 1555 1555 2.13 LINK MG MG B 201 O2G GNP B 202 1555 1555 2.03 LINK MG MG B 201 O2B GNP B 202 1555 1555 1.99 LINK MG MG B 201 O HOH B 310 1555 1555 2.10 LINK MG MG B 201 O HOH B 317 1555 1555 2.13 LINK OG SER A 17 MG MG A 201 1555 1555 2.14 LINK OG1 THR A 35 MG MG A 201 1555 1555 1.98 LINK MG MG A 201 O2B GNP A 202 1555 1555 2.13 LINK MG MG A 201 O2G GNP A 202 1555 1555 2.02 LINK MG MG A 201 O HOH A 309 1555 1555 2.16 LINK MG MG A 201 O HOH A 317 1555 1555 2.06 LINK OG SER C 17 MG MG C 201 1555 1555 2.17 LINK OG1 THR C 35 MG MG C 201 1555 1555 2.25 LINK MG MG C 201 O1G GNP C 202 1555 1555 2.12 LINK MG MG C 201 O1B GNP C 202 1555 1555 1.89 LINK MG MG C 201 O HOH C 305 1555 1555 2.01 LINK MG MG C 201 O HOH C 306 1555 1555 2.13 LINK OG SER D 17 MG MG D 202 1555 1555 2.09 LINK OG1 THR D 35 MG MG D 202 1555 1555 2.27 LINK O2G GNP D 201 MG MG D 202 1555 1555 2.23 LINK O2B GNP D 201 MG MG D 202 1555 1555 2.00 LINK MG MG D 202 O HOH D 301 1555 1555 2.61 LINK MG MG D 202 O HOH D 302 1555 1555 2.41 LINK OG SER E 17 MG MG E 201 1555 1555 2.33 LINK OG1 THR E 35 MG MG E 201 1555 1555 2.33 LINK MG MG E 201 O1G GNP E 202 1555 1555 1.97 LINK MG MG E 201 O1B GNP E 202 1555 1555 2.02 LINK MG MG E 201 O HOH E 303 1555 1555 2.40 LINK MG MG E 201 O HOH E 304 1555 1555 2.27 LINK OG SER F 17 MG MG F 201 1555 1555 2.27 LINK OG1 THR F 35 MG MG F 201 1555 1555 2.16 LINK MG MG F 201 O1B GNP F 202 1555 1555 1.95 LINK MG MG F 201 O1G GNP F 202 1555 1555 2.09 LINK MG MG F 201 O HOH F 301 1555 1555 2.16 LINK MG MG F 201 O HOH F 309 1555 1555 2.20 SITE 1 AC1 5 SER B 17 THR B 35 GNP B 202 HOH B 310 SITE 2 AC1 5 HOH B 317 SITE 1 AC2 30 GLY B 12 GLY B 13 VAL B 14 GLY B 15 SITE 2 AC2 30 LYS B 16 SER B 17 ALA B 18 PHE B 28 SITE 3 AC2 30 VAL B 29 ASP B 30 GLU B 31 TYR B 32 SITE 4 AC2 30 PRO B 34 THR B 35 GLY B 60 ASN B 116 SITE 5 AC2 30 LYS B 117 ASP B 119 LEU B 120 SER B 145 SITE 6 AC2 30 ALA B 146 LYS B 147 MG B 201 HOH B 303 SITE 7 AC2 30 HOH B 308 HOH B 309 HOH B 310 HOH B 312 SITE 8 AC2 30 HOH B 317 HOH B 326 SITE 1 AC3 10 LYS B 5 SER B 39 TYR B 40 ARG B 41 SITE 2 AC3 10 ASP B 54 TYR B 71 THR B 74 GLY E 0 SITE 3 AC3 10 MET E 1 GLU E 3 SITE 1 AC4 5 SER A 17 THR A 35 GNP A 202 HOH A 309 SITE 2 AC4 5 HOH A 317 SITE 1 AC5 27 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC5 27 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC5 27 VAL A 29 ASP A 30 GLU A 31 PRO A 34 SITE 4 AC5 27 THR A 35 GLY A 60 ASN A 116 LYS A 117 SITE 5 AC5 27 ASP A 119 LEU A 120 SER A 145 ALA A 146 SITE 6 AC5 27 LYS A 147 MG A 201 HOH A 302 HOH A 308 SITE 7 AC5 27 HOH A 309 HOH A 316 HOH A 317 SITE 1 AC6 12 LYS A 5 LEU A 6 VAL A 7 SER A 39 SITE 2 AC6 12 TYR A 40 ARG A 41 ASP A 54 TYR A 71 SITE 3 AC6 12 THR A 74 ARG B 102 GLU B 107 MET C 1 SITE 1 AC7 9 GLY A 0 MET A 1 GLU A 3 VAL C 7 SITE 2 AC7 9 TYR C 40 ARG C 41 ASP C 54 TYR C 71 SITE 3 AC7 9 THR C 74 SITE 1 AC8 5 SER C 17 THR C 35 GNP C 202 HOH C 305 SITE 2 AC8 5 HOH C 306 SITE 1 AC9 24 GLY C 13 VAL C 14 GLY C 15 LYS C 16 SITE 2 AC9 24 SER C 17 ALA C 18 PHE C 28 VAL C 29 SITE 3 AC9 24 ASP C 30 GLU C 31 TYR C 32 PRO C 34 SITE 4 AC9 24 THR C 35 GLY C 60 ASN C 116 LYS C 117 SITE 5 AC9 24 ASP C 119 LEU C 120 SER C 145 ALA C 146 SITE 6 AC9 24 LYS C 147 MG C 201 HOH C 305 HOH C 306 SITE 1 AD1 24 GLY D 12 GLY D 13 VAL D 14 GLY D 15 SITE 2 AD1 24 LYS D 16 SER D 17 ALA D 18 PHE D 28 SITE 3 AD1 24 VAL D 29 ASP D 30 TYR D 32 PRO D 34 SITE 4 AD1 24 THR D 35 GLY D 60 ASN D 116 LYS D 117 SITE 5 AD1 24 ASP D 119 LEU D 120 SER D 145 ALA D 146 SITE 6 AD1 24 LYS D 147 MG D 202 HOH D 301 HOH D 302 SITE 1 AD2 5 SER D 17 THR D 35 GNP D 201 HOH D 301 SITE 2 AD2 5 HOH D 302 SITE 1 AD3 8 LEU D 6 VAL D 7 SER D 39 ARG D 41 SITE 2 AD3 8 ASP D 54 TYR D 71 THR D 74 GLY F 0 SITE 1 AD4 5 SER E 17 THR E 35 GNP E 202 HOH E 303 SITE 2 AD4 5 HOH E 304 SITE 1 AD5 24 GLY E 12 GLY E 13 VAL E 14 GLY E 15 SITE 2 AD5 24 LYS E 16 SER E 17 ALA E 18 PHE E 28 SITE 3 AD5 24 VAL E 29 ASP E 30 TYR E 32 PRO E 34 SITE 4 AD5 24 THR E 35 GLY E 60 ASN E 116 LYS E 117 SITE 5 AD5 24 ASP E 119 LEU E 120 SER E 145 ALA E 146 SITE 6 AD5 24 LYS E 147 MG E 201 HOH E 303 HOH E 304 SITE 1 AD6 5 SER F 17 THR F 35 GNP F 202 HOH F 301 SITE 2 AD6 5 HOH F 309 SITE 1 AD7 25 GLY F 12 GLY F 13 VAL F 14 GLY F 15 SITE 2 AD7 25 LYS F 16 SER F 17 ALA F 18 PHE F 28 SITE 3 AD7 25 VAL F 29 ASP F 30 TYR F 32 PRO F 34 SITE 4 AD7 25 THR F 35 GLY F 60 ASN F 116 LYS F 117 SITE 5 AD7 25 ASP F 119 LEU F 120 SER F 145 ALA F 146 SITE 6 AD7 25 LYS F 147 MG F 201 HOH F 301 HOH F 309 SITE 7 AD7 25 HOH F 314 SITE 1 AD8 11 GLY D 0 MET D 1 LYS F 5 VAL F 7 SITE 2 AD8 11 SER F 39 TYR F 40 ARG F 41 ASP F 54 SITE 3 AD8 11 ILE F 55 TYR F 71 THR F 74 CRYST1 63.704 118.619 157.329 90.00 90.00 90.00 P 21 21 21 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015698 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008430 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006356 0.00000