HEADER TRANSFERASE 11-JAN-18 6FGJ TITLE CRYSTAL STRUCTURE OF THE SMALL ALARMONE SYNTHETHASE 2 FROM TITLE 2 STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP PYROPHOSPHOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GTP PYROPHOSPHOKINASE YWAC,RELA/SPOT DOMAIN PROTEIN; COMPND 5 EC: 2.7.6.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: YWAC, AB454_12730, AB466_12625, AB478_12605, AB526_12980, SOURCE 5 AFO97_10970, AFP37_10975, EP54_00695, EQ90_03295, ERS072738_01254, SOURCE 6 ERS074020_00750, HMPREF3211_00175; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS STRINGENT RESPONSE, ALARMONE, RELP, SAS2, MRSA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.BANGE,W.STEINCHEN,M.VOGT,F.ALTEGOER REVDAT 4 17-JAN-24 6FGJ 1 REMARK REVDAT 3 20-FEB-19 6FGJ 1 REMARK LINK REVDAT 2 14-FEB-18 6FGJ 1 JRNL REVDAT 1 07-FEB-18 6FGJ 0 JRNL AUTH W.STEINCHEN,M.S.VOGT,F.ALTEGOER,P.I.GIAMMARINARO,P.HORVATEK, JRNL AUTH 2 C.WOLZ,G.BANGE JRNL TITL STRUCTURAL AND MECHANISTIC DIVERGENCE OF THE SMALL (P)PPGPP JRNL TITL 2 SYNTHETASES RELP AND RELQ. JRNL REF SCI REP V. 8 2195 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29391580 JRNL DOI 10.1038/S41598-018-20634-4 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 24250 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0764 - 4.6805 0.97 2734 141 0.1812 0.1890 REMARK 3 2 4.6805 - 3.7155 0.98 2559 163 0.1673 0.2464 REMARK 3 3 3.7155 - 3.2459 1.00 2597 137 0.1988 0.2578 REMARK 3 4 3.2459 - 2.9492 0.98 2514 150 0.2350 0.3194 REMARK 3 5 2.9492 - 2.7378 1.00 2561 127 0.2502 0.2786 REMARK 3 6 2.7378 - 2.5764 0.99 2520 141 0.2455 0.3028 REMARK 3 7 2.5764 - 2.4474 0.99 2537 124 0.2290 0.3037 REMARK 3 8 2.4474 - 2.3409 1.00 2535 122 0.2533 0.3301 REMARK 3 9 2.3409 - 2.2507 0.98 2467 121 0.2880 0.3596 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3352 REMARK 3 ANGLE : 1.267 4508 REMARK 3 CHIRALITY : 0.077 516 REMARK 3 PLANARITY : 0.007 568 REMARK 3 DIHEDRAL : 15.835 2074 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 1:229) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5939 -15.9181 -14.7986 REMARK 3 T TENSOR REMARK 3 T11: 0.4021 T22: 0.4226 REMARK 3 T33: 0.3811 T12: -0.0208 REMARK 3 T13: -0.0686 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 1.0619 L22: 1.6897 REMARK 3 L33: 2.0276 L12: 0.8608 REMARK 3 L13: -0.2292 L23: -0.1384 REMARK 3 S TENSOR REMARK 3 S11: 0.0189 S12: 0.0848 S13: -0.1653 REMARK 3 S21: 0.0327 S22: -0.0630 S23: -0.1623 REMARK 3 S31: 0.0980 S32: 0.0692 S33: -0.0007 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESSEQ 32:229) REMARK 3 ORIGIN FOR THE GROUP (A): -31.9687 -20.0876 -42.3984 REMARK 3 T TENSOR REMARK 3 T11: 0.6953 T22: 0.4694 REMARK 3 T33: 0.5840 T12: 0.1792 REMARK 3 T13: -0.0694 T23: -0.1248 REMARK 3 L TENSOR REMARK 3 L11: 2.0369 L22: 2.0012 REMARK 3 L33: 1.5692 L12: -0.0972 REMARK 3 L13: 0.6927 L23: -0.0769 REMARK 3 S TENSOR REMARK 3 S11: 0.0124 S12: 0.0952 S13: 0.5155 REMARK 3 S21: -0.2847 S22: -0.1475 S23: 0.1032 REMARK 3 S31: -0.4945 S32: -0.2165 S33: -0.0030 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FGJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24257 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 49.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.03640 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5DEC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 0.2 M LITHIUM REMARK 280 SULFATE, 30% (W/V) PEG4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.41400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.90100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.90100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 143.12100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.90100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.90100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.70700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.90100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.90100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 143.12100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.90100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.90100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.70700 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 95.41400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 35.90100 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 -35.90100 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 47.70700 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -35.90100 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 35.90100 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -47.70700 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 -71.80200 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 -71.80200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -95.41400 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 -35.90100 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -35.90100 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -47.70700 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -35.90100 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -35.90100 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -47.70700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 GLY A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 TYR A 2 REMARK 465 VAL A 3 REMARK 465 ASP A 4 REMARK 465 ARG A 5 REMARK 465 LYS A 6 REMARK 465 PRO A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 TYR A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 ASP A 13 REMARK 465 LEU A 14 REMARK 465 ARG A 15 REMARK 465 HIS A 16 REMARK 465 ASP A 17 REMARK 465 PHE A 18 REMARK 465 LYS A 19 REMARK 465 ASN A 20 REMARK 465 SER A 21 REMARK 465 LEU A 22 REMARK 465 SER A 23 REMARK 465 LYS A 24 REMARK 465 PHE A 25 REMARK 465 GLU A 26 REMARK 465 ASN A 27 REMARK 465 GLY A 28 REMARK 465 ASP A 29 REMARK 465 GLU A 30 REMARK 465 ALA A 31 REMARK 465 PHE A 32 REMARK 465 GLU A 230 REMARK 465 MET B -6 REMARK 465 GLY B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 HIS B 1 REMARK 465 TYR B 2 REMARK 465 VAL B 3 REMARK 465 ASP B 4 REMARK 465 ARG B 5 REMARK 465 LYS B 6 REMARK 465 PRO B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 TYR B 10 REMARK 465 LEU B 11 REMARK 465 GLU B 12 REMARK 465 ASP B 13 REMARK 465 LEU B 14 REMARK 465 ARG B 15 REMARK 465 HIS B 16 REMARK 465 ASP B 17 REMARK 465 PHE B 18 REMARK 465 LYS B 19 REMARK 465 ASN B 20 REMARK 465 SER B 21 REMARK 465 LEU B 22 REMARK 465 SER B 23 REMARK 465 LYS B 24 REMARK 465 PHE B 25 REMARK 465 GLU B 26 REMARK 465 ASN B 27 REMARK 465 GLY B 28 REMARK 465 ASP B 29 REMARK 465 GLU B 30 REMARK 465 ALA B 31 REMARK 465 ASN B 196 REMARK 465 GLU B 230 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 193 OD1 ASN A 197 0.54 REMARK 500 NH2 ARG A 78 O HOH A 401 1.06 REMARK 500 CD1 LEU B 89 CD1 ILE B 96 1.08 REMARK 500 OE1 GLU A 189 NH1 ARG A 193 1.39 REMARK 500 C ARG A 193 OD1 ASN A 197 1.64 REMARK 500 OE2 GLU A 189 NH1 ARG A 193 1.66 REMARK 500 CD GLU A 189 NH1 ARG A 193 1.68 REMARK 500 O ASN B 64 O TYR B 67 1.71 REMARK 500 CD1 LEU B 89 CG1 ILE B 96 1.72 REMARK 500 OE2 GLU B 81 N ARG B 83 1.73 REMARK 500 O ARG A 193 CG ASN A 197 1.75 REMARK 500 NH2 ARG A 77 O HOH A 402 1.79 REMARK 500 O ARG B 193 ND2 ASN B 197 1.92 REMARK 500 OH TYR B 122 OD2 ASP B 141 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 184 CB - CG - SD ANGL. DEV. = -19.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU B 89 and ILE B REMARK 800 96 DBREF 6FGJ A 2 230 UNP W8U368 W8U368_STAAU 2 230 DBREF 6FGJ B 2 230 UNP W8U368 W8U368_STAAU 2 230 SEQADV 6FGJ MET A -6 UNP W8U368 INITIATING METHIONINE SEQADV 6FGJ GLY A -5 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS A -4 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS A -3 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS A -2 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS A -1 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS A 0 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS A 1 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ MET B -6 UNP W8U368 INITIATING METHIONINE SEQADV 6FGJ GLY B -5 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS B -4 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS B -3 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS B -2 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS B -1 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS B 0 UNP W8U368 EXPRESSION TAG SEQADV 6FGJ HIS B 1 UNP W8U368 EXPRESSION TAG SEQRES 1 A 237 MET GLY HIS HIS HIS HIS HIS HIS TYR VAL ASP ARG LYS SEQRES 2 A 237 PRO SER LEU TYR LEU GLU ASP LEU ARG HIS ASP PHE LYS SEQRES 3 A 237 ASN SER LEU SER LYS PHE GLU ASN GLY ASP GLU ALA PHE SEQRES 4 A 237 ASP THR LEU LEU GLY PHE VAL GLU LEU ASP HIS ILE TYR SEQRES 5 A 237 SER SER ALA LEU LYS GLU ILE SER THR LYS LEU SER ILE SEQRES 6 A 237 LEU ASP ASP ASN PHE ASN HIS ILE TYR LYS HIS ASN PRO SEQRES 7 A 237 ILE HIS HIS MET GLU ARG ARG VAL LYS GLU MET ARG SER SEQRES 8 A 237 LEU ILE GLU LYS LEU ASN ARG LYS GLY LEU GLN ILE SER SEQRES 9 A 237 ALA GLU THR ALA LYS GLU HIS ILE LEU ASP ILE ALA GLY SEQRES 10 A 237 ILE ARG VAL VAL CYS ASN TYR LEU ASP ASP ILE TYR LEU SEQRES 11 A 237 ILE GLU GLU MET LEU LEU LYS GLN GLU ASP VAL GLN LEU SEQRES 12 A 237 ILE LYS ARG LYS ASP TYR ILE GLN HIS PRO LYS GLU ASN SEQRES 13 A 237 GLY TYR ARG SER LEU HIS ILE VAL VAL SER ILE PRO VAL SEQRES 14 A 237 PHE LEU ALA GLU ARG VAL GLU VAL LEU PRO VAL GLU ILE SEQRES 15 A 237 GLN ILE ARG THR ILE GLY MET ASP MET TRP ALA SER LEU SEQRES 16 A 237 GLU HIS LYS ILE ARG TYR LYS ASN ASN ALA GLU THR GLU SEQRES 17 A 237 LYS TYR ARG ASP LEU LEU LYS GLU CYS ALA THR GLU ILE SEQRES 18 A 237 THR GLU VAL GLU ASP LYS LEU GLN GLN ILE HIS SER GLU SEQRES 19 A 237 ILE THR GLU SEQRES 1 B 237 MET GLY HIS HIS HIS HIS HIS HIS TYR VAL ASP ARG LYS SEQRES 2 B 237 PRO SER LEU TYR LEU GLU ASP LEU ARG HIS ASP PHE LYS SEQRES 3 B 237 ASN SER LEU SER LYS PHE GLU ASN GLY ASP GLU ALA PHE SEQRES 4 B 237 ASP THR LEU LEU GLY PHE VAL GLU LEU ASP HIS ILE TYR SEQRES 5 B 237 SER SER ALA LEU LYS GLU ILE SER THR LYS LEU SER ILE SEQRES 6 B 237 LEU ASP ASP ASN PHE ASN HIS ILE TYR LYS HIS ASN PRO SEQRES 7 B 237 ILE HIS HIS MET GLU ARG ARG VAL LYS GLU MET ARG SER SEQRES 8 B 237 LEU ILE GLU LYS LEU ASN ARG LYS GLY LEU GLN ILE SER SEQRES 9 B 237 ALA GLU THR ALA LYS GLU HIS ILE LEU ASP ILE ALA GLY SEQRES 10 B 237 ILE ARG VAL VAL CYS ASN TYR LEU ASP ASP ILE TYR LEU SEQRES 11 B 237 ILE GLU GLU MET LEU LEU LYS GLN GLU ASP VAL GLN LEU SEQRES 12 B 237 ILE LYS ARG LYS ASP TYR ILE GLN HIS PRO LYS GLU ASN SEQRES 13 B 237 GLY TYR ARG SER LEU HIS ILE VAL VAL SER ILE PRO VAL SEQRES 14 B 237 PHE LEU ALA GLU ARG VAL GLU VAL LEU PRO VAL GLU ILE SEQRES 15 B 237 GLN ILE ARG THR ILE GLY MET ASP MET TRP ALA SER LEU SEQRES 16 B 237 GLU HIS LYS ILE ARG TYR LYS ASN ASN ALA GLU THR GLU SEQRES 17 B 237 LYS TYR ARG ASP LEU LEU LYS GLU CYS ALA THR GLU ILE SEQRES 18 B 237 THR GLU VAL GLU ASP LYS LEU GLN GLN ILE HIS SER GLU SEQRES 19 B 237 ILE THR GLU HET PGE A 301 10 HET PGE B 301 10 HETNAM PGE TRIETHYLENE GLYCOL FORMUL 3 PGE 2(C6 H14 O4) FORMUL 5 HOH *33(H2 O) HELIX 1 AA1 ASP A 33 LYS A 68 1 36 HELIX 2 AA2 GLU A 81 LYS A 92 1 12 HELIX 3 AA3 SER A 97 ILE A 105 1 9 HELIX 4 AA4 TYR A 117 LYS A 130 1 14 HELIX 5 AA5 ILE A 180 TYR A 194 1 15 HELIX 6 AA6 ASN A 196 GLU A 201 5 6 HELIX 7 AA7 TYR A 203 THR A 229 1 27 HELIX 8 AA8 ASP B 33 TYR B 67 1 35 HELIX 9 AA9 GLU B 81 LYS B 92 1 12 HELIX 10 AB1 SER B 97 ILE B 105 1 9 HELIX 11 AB2 TYR B 117 LYS B 130 1 14 HELIX 12 AB3 ILE B 180 TYR B 194 1 15 HELIX 13 AB4 ALA B 198 THR B 229 1 32 SHEET 1 AA1 5 ILE A 72 VAL A 79 0 SHEET 2 AA1 5 ALA A 109 CYS A 115 -1 O VAL A 114 N HIS A 73 SHEET 3 AA1 5 VAL A 168 THR A 179 1 O ARG A 178 N CYS A 115 SHEET 4 AA1 5 LEU A 154 PHE A 163 -1 N ILE A 156 O ILE A 175 SHEET 5 AA1 5 GLN A 135 ASP A 141 -1 N ILE A 137 O VAL A 157 SHEET 1 AA2 5 ILE B 72 VAL B 79 0 SHEET 2 AA2 5 ALA B 109 CYS B 115 -1 O VAL B 114 N HIS B 73 SHEET 3 AA2 5 VAL B 168 THR B 179 1 O ARG B 178 N CYS B 115 SHEET 4 AA2 5 LEU B 154 PHE B 163 -1 N LEU B 154 O ILE B 177 SHEET 5 AA2 5 GLN B 135 ASP B 141 -1 N ILE B 137 O VAL B 157 SITE 1 AC1 3 TYR A 142 LYS A 147 ASN A 149 SITE 1 AC2 6 TYR B 142 LYS B 147 ASN B 149 TYR B 151 SITE 2 AC2 6 GLU B 189 ARG B 193 SITE 1 AC3 11 LEU B 85 ILE B 86 GLU B 87 LYS B 88 SITE 2 AC3 11 ASN B 90 ARG B 91 LYS B 92 GLY B 93 SITE 3 AC3 11 LEU B 94 GLN B 95 SER B 97 CRYST1 71.802 71.802 190.828 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013927 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013927 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005240 0.00000