HEADER ANTIMICROBIAL PROTEIN 14-JAN-18 6FHG TITLE CRYSTAL STRUCTURE OF THE TS2631 ENDOLYSIN FROM THERMUS SCOTODUCTUS TITLE 2 PHAGE WITH THE UNIQUE N-TERMINAL MOIETY RESPONSIBLE FOR PEPTIDOGLYCAN TITLE 3 ANCHORING COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYST ENDOLYSIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS PHAGE 2631; SOURCE 3 ORGANISM_TAXID: 1542447; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENDOLYSIN, THERMOPHILIC, N-TERMINAL DOMAIN, T7-LIKE FOLD, KEYWDS 2 ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.ZETH,E.SANCHO-VAELLO,M.PLOTKA REVDAT 3 17-JAN-24 6FHG 1 LINK REVDAT 2 20-FEB-19 6FHG 1 JRNL REVDAT 1 30-JAN-19 6FHG 0 JRNL AUTH M.PLOTKA,E.SANCHO-VAELLO,S.DORAWA,A.K.KACZOROWSKA, JRNL AUTH 2 L.P.KOZLOWSKI,T.KACZOROWSKI,K.ZETH JRNL TITL STRUCTURE AND FUNCTION OF THE TS2631 ENDOLYSIN OF THERMUS JRNL TITL 2 SCOTODUCTUS PHAGE VB_TSC2631 WITH UNIQUE N-TERMINAL JRNL TITL 3 EXTENSION USED FOR PEPTIDOGLYCAN BINDING. JRNL REF SCI REP V. 9 1261 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30718611 JRNL DOI 10.1038/S41598-018-37417-6 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 24301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7086 - 4.0551 1.00 2957 150 0.1515 0.1889 REMARK 3 2 4.0551 - 3.2188 1.00 2830 142 0.1723 0.2118 REMARK 3 3 3.2188 - 2.8120 1.00 2772 150 0.2251 0.2401 REMARK 3 4 2.8120 - 2.5549 1.00 2761 149 0.2480 0.2925 REMARK 3 5 2.5549 - 2.3718 1.00 2755 164 0.2580 0.3400 REMARK 3 6 2.3718 - 2.2320 1.00 948 45 0.2688 0.3400 REMARK 3 7 2.2320 - 2.1202 0.96 2583 152 0.3056 0.3362 REMARK 3 8 2.1202 - 2.0279 1.00 2730 148 0.2907 0.3578 REMARK 3 9 2.0279 - 1.9498 1.00 2719 146 0.3117 0.3725 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2638 REMARK 3 ANGLE : 1.057 3606 REMARK 3 CHIRALITY : 0.044 368 REMARK 3 PLANARITY : 0.006 463 REMARK 3 DIHEDRAL : 13.140 964 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.1741 77.8552 49.4149 REMARK 3 T TENSOR REMARK 3 T11: 0.3541 T22: 0.3716 REMARK 3 T33: 0.4388 T12: 0.0130 REMARK 3 T13: -0.0719 T23: -0.0707 REMARK 3 L TENSOR REMARK 3 L11: 2.3775 L22: 8.7389 REMARK 3 L33: 8.4511 L12: -2.0604 REMARK 3 L13: -1.8962 L23: -1.3793 REMARK 3 S TENSOR REMARK 3 S11: 0.2689 S12: 0.0668 S13: 0.5389 REMARK 3 S21: -0.8996 S22: -0.2143 S23: 0.8644 REMARK 3 S31: -0.2227 S32: -1.0824 S33: 0.0146 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0104 57.4983 34.8810 REMARK 3 T TENSOR REMARK 3 T11: 0.5563 T22: 0.3172 REMARK 3 T33: 0.5023 T12: -0.0300 REMARK 3 T13: -0.0870 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: -0.1430 L22: 0.7838 REMARK 3 L33: 3.6619 L12: 0.7383 REMARK 3 L13: 1.8314 L23: 1.6563 REMARK 3 S TENSOR REMARK 3 S11: 0.1401 S12: -0.0665 S13: 0.3190 REMARK 3 S21: 0.2506 S22: -0.0831 S23: -0.5029 REMARK 3 S31: -0.7766 S32: -0.5700 S33: -0.1286 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5616 36.5469 35.5819 REMARK 3 T TENSOR REMARK 3 T11: 0.3247 T22: 0.3332 REMARK 3 T33: 0.3292 T12: -0.0101 REMARK 3 T13: -0.0356 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.8003 L22: 1.5360 REMARK 3 L33: 9.4259 L12: -0.8340 REMARK 3 L13: 1.3999 L23: -1.9575 REMARK 3 S TENSOR REMARK 3 S11: 0.3133 S12: 0.2155 S13: -0.2091 REMARK 3 S21: 0.0387 S22: -0.2089 S23: -0.2236 REMARK 3 S31: 0.2099 S32: 1.3524 S33: -0.1335 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.5767 46.5698 41.4452 REMARK 3 T TENSOR REMARK 3 T11: 0.3364 T22: 0.5169 REMARK 3 T33: 0.4153 T12: -0.0895 REMARK 3 T13: -0.1050 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 3.1867 L22: 4.1968 REMARK 3 L33: 3.6942 L12: 0.7496 REMARK 3 L13: 1.3051 L23: -0.5956 REMARK 3 S TENSOR REMARK 3 S11: -0.0958 S12: -0.1446 S13: 0.2871 REMARK 3 S21: 0.3774 S22: 0.0712 S23: -0.4937 REMARK 3 S31: -0.4552 S32: 0.9126 S33: 0.1074 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9398 42.3924 34.3838 REMARK 3 T TENSOR REMARK 3 T11: 0.2660 T22: 0.2644 REMARK 3 T33: 0.2712 T12: -0.0446 REMARK 3 T13: -0.0264 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 2.3998 L22: 5.9582 REMARK 3 L33: 5.1623 L12: -0.6973 REMARK 3 L13: 0.6983 L23: -2.0169 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: 0.0274 S13: 0.1836 REMARK 3 S21: 0.0187 S22: -0.1963 S23: -0.2169 REMARK 3 S31: -0.3135 S32: 0.6481 S33: 0.1125 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2405 25.6278 35.7043 REMARK 3 T TENSOR REMARK 3 T11: 0.5065 T22: 0.3854 REMARK 3 T33: 0.4709 T12: 0.1466 REMARK 3 T13: -0.0080 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 3.5443 L22: 3.7081 REMARK 3 L33: 4.5754 L12: -0.7777 REMARK 3 L13: 0.0974 L23: 0.7366 REMARK 3 S TENSOR REMARK 3 S11: 0.1709 S12: -0.1576 S13: -0.8840 REMARK 3 S21: -0.2695 S22: -0.2607 S23: -0.3205 REMARK 3 S31: 1.1624 S32: 0.9387 S33: 0.1363 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3168 32.0664 32.6005 REMARK 3 T TENSOR REMARK 3 T11: 0.3497 T22: 0.2218 REMARK 3 T33: 0.3728 T12: -0.0221 REMARK 3 T13: -0.0219 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 4.0963 L22: 3.9213 REMARK 3 L33: 3.9373 L12: -1.4450 REMARK 3 L13: 1.7841 L23: -2.0613 REMARK 3 S TENSOR REMARK 3 S11: 0.3100 S12: -0.0856 S13: -0.5200 REMARK 3 S21: -0.2644 S22: -0.1518 S23: 0.6237 REMARK 3 S31: 0.4680 S32: -0.0931 S33: 0.0057 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.9565 39.5198 23.0796 REMARK 3 T TENSOR REMARK 3 T11: 0.3929 T22: 0.3997 REMARK 3 T33: 0.2965 T12: 0.0319 REMARK 3 T13: -0.0175 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 7.2000 L22: 3.2788 REMARK 3 L33: 4.5323 L12: -0.6334 REMARK 3 L13: -0.4672 L23: -0.2301 REMARK 3 S TENSOR REMARK 3 S11: 0.1507 S12: 0.9595 S13: 0.0484 REMARK 3 S21: -0.6089 S22: -0.2422 S23: -0.0388 REMARK 3 S31: -0.1283 S32: 0.2585 S33: 0.0919 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.9466 33.6995 26.3386 REMARK 3 T TENSOR REMARK 3 T11: 0.3642 T22: 0.8834 REMARK 3 T33: 0.4409 T12: 0.0761 REMARK 3 T13: 0.0557 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 5.3286 L22: 4.0967 REMARK 3 L33: 8.1869 L12: 3.2338 REMARK 3 L13: -1.9083 L23: -5.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.2073 S12: -0.3609 S13: -0.9931 REMARK 3 S21: -1.0582 S22: -0.8257 S23: -1.6172 REMARK 3 S31: 0.9712 S32: 2.2302 S33: 0.9531 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1272 25.4416 26.9518 REMARK 3 T TENSOR REMARK 3 T11: 0.4661 T22: 0.3654 REMARK 3 T33: 0.3654 T12: -0.0074 REMARK 3 T13: -0.0132 T23: -0.1118 REMARK 3 L TENSOR REMARK 3 L11: 4.1518 L22: 3.4021 REMARK 3 L33: 3.6558 L12: 2.8839 REMARK 3 L13: 2.0582 L23: 2.5550 REMARK 3 S TENSOR REMARK 3 S11: -0.1643 S12: 0.6887 S13: -0.6530 REMARK 3 S21: -0.5297 S22: 0.4481 S23: -0.2899 REMARK 3 S31: 0.6997 S32: 0.7440 S33: -0.2978 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7246 44.0088 44.9006 REMARK 3 T TENSOR REMARK 3 T11: 0.4646 T22: 0.3102 REMARK 3 T33: 0.3834 T12: -0.0023 REMARK 3 T13: 0.0192 T23: -0.0929 REMARK 3 L TENSOR REMARK 3 L11: 2.5229 L22: 2.3539 REMARK 3 L33: 7.7221 L12: 1.4856 REMARK 3 L13: 1.0263 L23: -1.6894 REMARK 3 S TENSOR REMARK 3 S11: -0.1773 S12: -1.0503 S13: -0.0305 REMARK 3 S21: 0.8306 S22: -0.3428 S23: 0.6884 REMARK 3 S31: -0.1504 S32: -0.7505 S33: 0.7366 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1310 62.3767 56.2659 REMARK 3 T TENSOR REMARK 3 T11: 0.4889 T22: 0.3650 REMARK 3 T33: 0.4459 T12: -0.0941 REMARK 3 T13: -0.0503 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 0.4056 L22: 3.7600 REMARK 3 L33: 1.8769 L12: -1.6178 REMARK 3 L13: -1.2831 L23: 3.0509 REMARK 3 S TENSOR REMARK 3 S11: 0.2761 S12: -0.1914 S13: -0.2613 REMARK 3 S21: -0.2845 S22: -0.1846 S23: 0.1624 REMARK 3 S31: 0.3885 S32: -0.5361 S33: 0.2411 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5234 81.9023 61.3601 REMARK 3 T TENSOR REMARK 3 T11: 0.3618 T22: 0.6682 REMARK 3 T33: 0.3487 T12: -0.1508 REMARK 3 T13: -0.0113 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 1.2159 L22: 0.7560 REMARK 3 L33: 5.2101 L12: 1.0154 REMARK 3 L13: -2.2169 L23: -1.2667 REMARK 3 S TENSOR REMARK 3 S11: 0.3230 S12: -0.6372 S13: 0.2486 REMARK 3 S21: 0.1027 S22: -0.4126 S23: 0.0591 REMARK 3 S31: -0.0437 S32: 0.8153 S33: 0.1301 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6096 75.8062 50.4867 REMARK 3 T TENSOR REMARK 3 T11: 0.3486 T22: 0.4623 REMARK 3 T33: 0.3584 T12: 0.0341 REMARK 3 T13: 0.0227 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 8.5739 L22: 2.6186 REMARK 3 L33: 4.8387 L12: -3.3039 REMARK 3 L13: 0.8424 L23: -1.1573 REMARK 3 S TENSOR REMARK 3 S11: 0.2722 S12: 1.0115 S13: 0.0457 REMARK 3 S21: -0.2529 S22: -0.8156 S23: -0.9464 REMARK 3 S31: -0.1014 S32: 0.5339 S33: 0.5437 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2458 79.2913 56.0315 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.3787 REMARK 3 T33: 0.2978 T12: -0.0269 REMARK 3 T13: -0.0183 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 4.1057 L22: 3.3498 REMARK 3 L33: 4.0968 L12: 0.3685 REMARK 3 L13: -0.7009 L23: -0.5263 REMARK 3 S TENSOR REMARK 3 S11: 0.1606 S12: -0.5140 S13: 0.0594 REMARK 3 S21: 0.2623 S22: -0.1598 S23: -0.1460 REMARK 3 S31: -0.1784 S32: 0.6022 S33: 0.0423 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1795 70.6295 59.4835 REMARK 3 T TENSOR REMARK 3 T11: 0.2550 T22: 0.3605 REMARK 3 T33: 0.3545 T12: -0.0436 REMARK 3 T13: -0.0194 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 5.3741 L22: 5.4933 REMARK 3 L33: 6.9185 L12: 0.8317 REMARK 3 L13: -0.2952 L23: -2.3040 REMARK 3 S TENSOR REMARK 3 S11: 0.3021 S12: -0.6706 S13: -0.5819 REMARK 3 S21: 0.5168 S22: -0.4006 S23: -0.1840 REMARK 3 S31: -0.1087 S32: 0.3728 S33: 0.1668 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 82 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.6164 81.7898 66.7692 REMARK 3 T TENSOR REMARK 3 T11: 0.3448 T22: 0.6420 REMARK 3 T33: 0.2961 T12: -0.1327 REMARK 3 T13: 0.0532 T23: -0.1285 REMARK 3 L TENSOR REMARK 3 L11: 4.7382 L22: 4.7283 REMARK 3 L33: 5.1537 L12: 1.7624 REMARK 3 L13: -0.3778 L23: -1.0304 REMARK 3 S TENSOR REMARK 3 S11: 0.3837 S12: -0.9646 S13: 0.3412 REMARK 3 S21: 0.4444 S22: -0.3803 S23: 0.0173 REMARK 3 S31: -0.5569 S32: 0.2800 S33: 0.0202 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6454 81.1326 70.8355 REMARK 3 T TENSOR REMARK 3 T11: 0.5135 T22: 1.0832 REMARK 3 T33: 0.3957 T12: -0.1900 REMARK 3 T13: -0.0729 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 7.1492 L22: 4.7788 REMARK 3 L33: 2.6584 L12: -3.2005 REMARK 3 L13: -0.7163 L23: -2.4292 REMARK 3 S TENSOR REMARK 3 S11: 0.3254 S12: -1.2126 S13: 0.6906 REMARK 3 S21: 0.9489 S22: -0.9876 S23: -1.1764 REMARK 3 S31: -0.5875 S32: 1.3739 S33: 0.4931 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4816 90.3365 71.5246 REMARK 3 T TENSOR REMARK 3 T11: 0.6948 T22: 1.2355 REMARK 3 T33: 0.5806 T12: -0.2568 REMARK 3 T13: 0.1599 T23: -0.5566 REMARK 3 L TENSOR REMARK 3 L11: 1.6891 L22: 4.0823 REMARK 3 L33: 1.0306 L12: -1.0553 REMARK 3 L13: 1.3423 L23: -0.6646 REMARK 3 S TENSOR REMARK 3 S11: -0.3213 S12: -2.0965 S13: 0.9676 REMARK 3 S21: 1.0243 S22: 0.5517 S23: 0.6295 REMARK 3 S31: -0.3703 S32: -0.4984 S33: -0.1239 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008327. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26266 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 48.693 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1LBA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350 AND 0.2 MM DI-SODIUM REMARK 280 TARTRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.78950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.35750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.04700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.35750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.78950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.04700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 154 REMARK 465 GLY B 155 REMARK 465 GLN B 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 MET B 1 CG SD CE REMARK 470 ARG B 2 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 139 CA - CB - SG ANGL. DEV. = 9.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 80 -33.29 -146.48 REMARK 500 CYS A 80 -36.40 -144.77 REMARK 500 ARG A 82 -119.94 58.25 REMARK 500 PRO A 140 43.58 -103.21 REMARK 500 CYS B 80 -32.47 -145.57 REMARK 500 ARG B 82 -118.61 57.85 REMARK 500 PRO B 140 43.99 -104.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 30 ND1 REMARK 620 2 HIS A 131 ND1 106.0 REMARK 620 3 CYS A 139 SG 104.9 97.0 REMARK 620 4 HOH A 367 O 118.2 116.6 111.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 30 ND1 REMARK 620 2 HIS B 131 ND1 102.5 REMARK 620 3 CYS B 139 SG 100.8 103.7 REMARK 620 4 HOH B 341 O 109.9 104.9 131.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 DBREF1 6FHG A 1 156 UNP A0A088FLK9_9VIRU DBREF2 6FHG A A0A088FLK9 1 156 DBREF1 6FHG B 1 156 UNP A0A088FLK9_9VIRU DBREF2 6FHG B A0A088FLK9 1 156 SEQRES 1 A 156 MET ARG ILE LEU GLU PRO TRP ASN ARG TRP TYR ARG GLN SEQRES 2 A 156 LYS ARG ALA TYR ARG VAL ARG LEU THR PRO ILE HIS TYR SEQRES 3 A 156 VAL VAL LEU HIS HIS THR ALA GLY PRO GLU ASN GLN THR SEQRES 4 A 156 PRO GLU ALA ILE LYS ARG TYR HIS GLU GLU ALA ARG GLY SEQRES 5 A 156 TRP PRO HIS ILE GLY TYR HIS TYR LEU VAL TYR ARG ASP SEQRES 6 A 156 GLY ARG VAL TYR LYS THR LEU PRO ASN ASN ALA VAL PRO SEQRES 7 A 156 ILE CYS VAL ARG GLU PHE ASN PRO VAL SER ILE CYS VAL SEQRES 8 A 156 ALA ALA VAL GLY ASP PHE SER ALA GLY VAL TRP PRO ASP SEQRES 9 A 156 ASP ALA PRO GLY TRP ARG ALA LEU TRP GLU LEU LYS GLN SEQRES 10 A 156 ALA LEU ALA LYS ALA TYR PRO LYS ALA LEU PHE VAL LEU SEQRES 11 A 156 HIS LYS ASN LEU VAL PRO THR GLU CYS PRO GLY ARG LEU SEQRES 12 A 156 THR TRP GLU LEU ILE GLN ARG LYS GLY GLY GLY GLY GLN SEQRES 1 B 156 MET ARG ILE LEU GLU PRO TRP ASN ARG TRP TYR ARG GLN SEQRES 2 B 156 LYS ARG ALA TYR ARG VAL ARG LEU THR PRO ILE HIS TYR SEQRES 3 B 156 VAL VAL LEU HIS HIS THR ALA GLY PRO GLU ASN GLN THR SEQRES 4 B 156 PRO GLU ALA ILE LYS ARG TYR HIS GLU GLU ALA ARG GLY SEQRES 5 B 156 TRP PRO HIS ILE GLY TYR HIS TYR LEU VAL TYR ARG ASP SEQRES 6 B 156 GLY ARG VAL TYR LYS THR LEU PRO ASN ASN ALA VAL PRO SEQRES 7 B 156 ILE CYS VAL ARG GLU PHE ASN PRO VAL SER ILE CYS VAL SEQRES 8 B 156 ALA ALA VAL GLY ASP PHE SER ALA GLY VAL TRP PRO ASP SEQRES 9 B 156 ASP ALA PRO GLY TRP ARG ALA LEU TRP GLU LEU LYS GLN SEQRES 10 B 156 ALA LEU ALA LYS ALA TYR PRO LYS ALA LEU PHE VAL LEU SEQRES 11 B 156 HIS LYS ASN LEU VAL PRO THR GLU CYS PRO GLY ARG LEU SEQRES 12 B 156 THR TRP GLU LEU ILE GLN ARG LYS GLY GLY GLY GLY GLN HET ZN A 201 1 HET ZN B 201 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *122(H2 O) HELIX 1 AA1 PRO A 6 TYR A 11 1 6 HELIX 2 AA2 THR A 39 ALA A 50 1 12 HELIX 3 AA3 VAL A 81 PRO A 86 5 6 HELIX 4 AA4 ALA A 106 TYR A 123 1 18 HELIX 5 AA5 HIS A 131 VAL A 135 1 5 HELIX 6 AA6 THR A 144 GLY A 152 1 9 HELIX 7 AA7 PRO B 6 TYR B 11 1 6 HELIX 8 AA8 THR B 39 ALA B 50 1 12 HELIX 9 AA9 VAL B 81 PRO B 86 5 6 HELIX 10 AB1 ALA B 106 TYR B 123 1 18 HELIX 11 AB2 HIS B 131 VAL B 135 1 5 HELIX 12 AB3 THR B 144 GLY B 152 1 9 SHEET 1 AA1 5 VAL A 68 LYS A 70 0 SHEET 2 AA1 5 TYR A 60 VAL A 62 -1 N LEU A 61 O TYR A 69 SHEET 3 AA1 5 SER A 88 ALA A 93 1 O ALA A 92 N TYR A 60 SHEET 4 AA1 5 TYR A 26 HIS A 31 1 N VAL A 28 O ILE A 89 SHEET 5 AA1 5 LEU A 127 LEU A 130 1 O LEU A 127 N VAL A 27 SHEET 1 AA2 5 VAL B 68 LYS B 70 0 SHEET 2 AA2 5 TYR B 60 VAL B 62 -1 N LEU B 61 O TYR B 69 SHEET 3 AA2 5 SER B 88 ALA B 93 1 O ALA B 92 N TYR B 60 SHEET 4 AA2 5 TYR B 26 HIS B 31 1 N VAL B 28 O VAL B 91 SHEET 5 AA2 5 LEU B 127 LEU B 130 1 O LEU B 127 N VAL B 27 SSBOND 1 CYS A 80 CYS A 90 1555 1555 2.03 SSBOND 2 CYS B 80 CYS B 90 1555 1555 2.03 LINK ND1 HIS A 30 ZN ZN A 201 1555 1555 2.16 LINK ND1 HIS A 131 ZN ZN A 201 1555 1555 2.07 LINK SG CYS A 139 ZN ZN A 201 1555 1555 2.01 LINK ZN ZN A 201 O HOH A 367 1555 1555 2.29 LINK ND1 HIS B 30 ZN ZN B 201 1555 1555 2.13 LINK ND1 HIS B 131 ZN ZN B 201 1555 1555 2.10 LINK SG CYS B 139 ZN ZN B 201 1555 1555 2.25 LINK ZN ZN B 201 O HOH B 341 1555 1555 2.63 CISPEP 1 CYS A 139 PRO A 140 0 1.53 CISPEP 2 CYS B 139 PRO B 140 0 1.92 SITE 1 AC1 4 HIS A 30 HIS A 131 CYS A 139 HOH A 367 SITE 1 AC2 4 HIS B 30 HIS B 131 CYS B 139 HOH B 341 CRYST1 53.579 56.094 116.715 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018664 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008568 0.00000