HEADER PLANT PROTEIN 18-JAN-18 6FIH TITLE CRYSTAL STRUCTURE OF THE ANX2 ECTODOMAIN FROM ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-LIKE PROTEIN KINASE ANXUR2; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.11.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ANX2, AT5G28680, F4I4.60; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: TNAOS38; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PFASTMULTIBAC KEYWDS RECEPTOR KINASE, MALECTIN-LIKE DOMAIN, MEMBRANE PROTEIN, ARABIDOPSIS KEYWDS 2 THALIANA, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.SANTIAGO REVDAT 3 29-JUL-20 6FIH 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 10-OCT-18 6FIH 1 REMARK REVDAT 1 11-JUL-18 6FIH 0 JRNL AUTH S.MOUSSU,S.AUGUSTIN,A.O.ROMAN,C.BROYART,J.SANTIAGO JRNL TITL CRYSTAL STRUCTURES OF TWO TANDEM MALECTIN-LIKE RECEPTOR JRNL TITL 2 KINASES INVOLVED IN PLANT REPRODUCTION. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 74 671 2018 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 29968676 JRNL DOI 10.1107/S205979831800774X REMARK 2 REMARK 2 RESOLUTION. 1.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 165089 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 8689 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9560 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.5420 REMARK 3 BIN FREE R VALUE SET COUNT : 503 REMARK 3 BIN FREE R VALUE : 0.5350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2950 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 433 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.91000 REMARK 3 B22 (A**2) : -2.30000 REMARK 3 B33 (A**2) : 1.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.88000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.029 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.454 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3233 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2903 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4426 ; 1.714 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6812 ; 1.045 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 409 ; 6.568 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;35.817 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 513 ;10.241 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;17.607 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 506 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3559 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 624 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1549 ; 1.694 ; 2.066 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1548 ; 1.686 ; 2.064 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1942 ; 2.117 ; 3.110 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1943 ; 2.123 ; 3.111 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1684 ; 2.310 ; 2.344 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1684 ; 2.310 ; 2.343 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2470 ; 2.693 ; 3.430 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3671 ; 3.911 ;27.454 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3562 ; 3.436 ;26.442 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6136 ; 2.736 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 275 ;34.505 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6202 ;14.466 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1200008403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999894 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 175203 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.080 REMARK 200 RESOLUTION RANGE LOW (A) : 44.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 6.460 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03700 REMARK 200 FOR THE DATA SET : 18.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.16000 REMARK 200 FOR SHELL : 1.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.5, 28% PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.78300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.88300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.78300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.88300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1019 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1028 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 27 REMARK 465 VAL A 197 REMARK 465 GLY A 198 REMARK 465 PHE A 199 REMARK 465 SER A 200 REMARK 465 ASP A 201 REMARK 465 GLN A 202 REMARK 465 THR A 203 REMARK 465 SER A 414 REMARK 465 PRO A 415 REMARK 465 MET A 416 REMARK 465 GLN A 417 REMARK 465 ALA A 418 REMARK 465 ASN A 419 REMARK 465 GLU A 420 REMARK 465 ASP A 421 REMARK 465 VAL A 422 REMARK 465 LYS A 423 REMARK 465 LYS A 424 REMARK 465 ASP A 425 REMARK 465 PHE A 426 REMARK 465 GLN A 427 REMARK 465 GLY A 428 REMARK 465 ASP A 429 REMARK 465 LYS A 430 REMARK 465 ARG A 431 REMARK 465 LEU A 432 REMARK 465 GLU A 433 REMARK 465 ASN A 434 REMARK 465 LEU A 435 REMARK 465 TYR A 436 REMARK 465 PHE A 437 REMARK 465 GLN A 438 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 28 CG CD OE1 NE2 REMARK 470 LEU A 196 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 623 O HOH A 693 2.00 REMARK 500 O HOH A 609 O HOH A 751 2.05 REMARK 500 O HOH A 623 O HOH A 930 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 97 CG ASP A 97 OD1 0.158 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 101 CG - SD - CE ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG A 235 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 MET A 266 CG - SD - CE ANGL. DEV. = -19.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 126 -124.63 52.13 REMARK 500 ASP A 192 -75.66 -132.88 REMARK 500 ASN A 258 15.82 58.94 REMARK 500 GLN A 264 -126.59 57.50 REMARK 500 GLN A 264 -127.20 58.18 REMARK 500 ALA A 271 144.15 -170.04 REMARK 500 ASP A 337 -123.25 53.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1033 DISTANCE = 6.79 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 33 OG REMARK 620 2 CYS A 34 O 108.2 REMARK 620 3 PRO A 77 O 91.3 159.0 REMARK 620 4 THR A 80 O 160.8 78.2 80.8 REMARK 620 5 THR A 80 OG1 80.6 88.0 87.8 81.7 REMARK 620 6 ASN A 180 O 98.5 94.2 90.2 99.0 177.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 218 OD1 REMARK 620 2 VAL A 219 O 102.5 REMARK 620 3 VAL A 275 O 99.2 157.3 REMARK 620 4 THR A 278 O 158.4 87.8 74.0 REMARK 620 5 THR A 278 OG1 78.5 97.5 93.1 81.4 REMARK 620 6 ASN A 393 O 99.6 85.2 84.9 100.2 177.0 REMARK 620 N 1 2 3 4 5 DBREF 6FIH A 27 431 UNP Q3E8W4 ANX2_ARATH 27 431 SEQADV 6FIH LEU A 432 UNP Q3E8W4 EXPRESSION TAG SEQADV 6FIH GLU A 433 UNP Q3E8W4 EXPRESSION TAG SEQADV 6FIH ASN A 434 UNP Q3E8W4 EXPRESSION TAG SEQADV 6FIH LEU A 435 UNP Q3E8W4 EXPRESSION TAG SEQADV 6FIH TYR A 436 UNP Q3E8W4 EXPRESSION TAG SEQADV 6FIH PHE A 437 UNP Q3E8W4 EXPRESSION TAG SEQADV 6FIH GLN A 438 UNP Q3E8W4 EXPRESSION TAG SEQRES 1 A 412 GLY GLN ASP ILE SER LEU SER CYS GLY ALA SER GLU PRO SEQRES 2 A 412 ALA VAL ASP GLN ASP LYS LYS LYS TRP GLU PRO ASP THR SEQRES 3 A 412 LYS PHE LEU LYS THR PRO ASN THR VAL HIS ALA PRO ALA SEQRES 4 A 412 THR TYR GLN ASP PRO SER LEU LEU SER THR VAL PRO TYR SEQRES 5 A 412 MET THR SER ARG ILE PHE THR ALA PRO ALA THR TYR GLU SEQRES 6 A 412 ILE PRO VAL LYS GLY ASP LYS ARG HIS MET LEU ARG LEU SEQRES 7 A 412 HIS PHE TYR PRO SER THR TYR THR GLY LEU ASN ILE LEU SEQRES 8 A 412 ASP SER TYR PHE SER VAL ALA ALA ASN ASP LEU THR LEU SEQRES 9 A 412 LEU SER ASN PHE SER ALA ALA ILE THR CYS GLN ALA LEU SEQRES 10 A 412 THR GLN ALA TYR LEU VAL ARG GLU TYR SER LEU ALA PRO SEQRES 11 A 412 SER GLU LYS ASP VAL LEU SER ILE ILE PHE THR PRO SER SEQRES 12 A 412 ASP LYS HIS PRO LYS ALA PHE ALA PHE ILE ASN GLY ILE SEQRES 13 A 412 GLU VAL ILE PRO MET PRO GLU LEU PHE ASP THR ALA SER SEQRES 14 A 412 LEU VAL GLY PHE SER ASP GLN THR SER ASP THR LYS THR SEQRES 15 A 412 ALA ASN LEU GLN THR MET PHE ARG LEU ASN VAL GLY GLY SEQRES 16 A 412 GLN ASP ILE PRO GLY SER GLN ASP SER GLY GLY LEU THR SEQRES 17 A 412 ARG THR TRP TYR ASN ASP ALA PRO TYR ILE PHE SER ALA SEQRES 18 A 412 GLY LEU GLY VAL THR LEU GLN ALA SER ASN ASN PHE ARG SEQRES 19 A 412 ILE ASP TYR GLN LYS MET PRO VAL SER THR ALA PRO ALA SEQRES 20 A 412 ASP VAL TYR LYS THR ALA ARG SER GLN GLY PRO ASN GLY SEQRES 21 A 412 ASP ILE ASN MET LYS SER ASN LEU THR TRP MET PHE GLN SEQRES 22 A 412 VAL ASP THR ASN PHE THR TYR ILE MET ARG LEU HIS PHE SEQRES 23 A 412 CYS GLU PHE GLN LEU ALA LYS ILE ASN GLN LYS VAL PHE SEQRES 24 A 412 ASN ILE PHE ILE ASN ASN ARG THR ALA GLN GLY ASP THR SEQRES 25 A 412 ASN PRO ALA ASP ILE LEU GLY TRP THR GLY GLY LYS GLY SEQRES 26 A 412 ILE PRO THR TYR LYS ASP TYR ALA ILE TYR VAL ASP ALA SEQRES 27 A 412 ASN THR GLY GLY GLY GLY GLU GLU ILE SER LEU GLN MET SEQRES 28 A 412 THR PRO SER THR PHE GLY GLN PRO GLU TYR TYR ASP SER SEQRES 29 A 412 GLN LEU ASN GLY LEU GLU ILE PHE LYS ILE ASP THR MET SEQRES 30 A 412 LYS ASN LEU ALA GLY PRO ASN PRO LYS PRO SER PRO MET SEQRES 31 A 412 GLN ALA ASN GLU ASP VAL LYS LYS ASP PHE GLN GLY ASP SEQRES 32 A 412 LYS ARG LEU GLU ASN LEU TYR PHE GLN HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET NAG C 1 14 HET NAG C 2 14 HET CA A 501 1 HET CA A 502 1 HET NAG A 508 14 HET NAG A 509 14 HET EDO A 510 4 HET EDO A 511 4 HET EDO A 512 4 HET EDO A 513 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 4 CA 2(CA 2+) FORMUL 8 EDO 4(C2 H6 O2) FORMUL 12 HOH *433(H2 O) HELIX 1 AA1 THR A 52 LEU A 55 5 4 HELIX 2 AA2 ASN A 115 SER A 119 5 5 HELIX 3 AA3 SER A 135 THR A 144 1 10 HELIX 4 AA4 PRO A 225 ASP A 229 5 5 HELIX 5 AA5 ALA A 241 ILE A 244 5 4 HELIX 6 AA6 PRO A 267 ALA A 271 5 5 HELIX 7 AA7 PRO A 272 LYS A 277 1 6 HELIX 8 AA8 ASN A 285 LYS A 291 1 7 HELIX 9 AA9 ASP A 342 GLY A 348 1 7 SHEET 1 AA1 8 ALA A 40 VAL A 41 0 SHEET 2 AA1 8 LYS A 47 PRO A 50 -1 O TRP A 48 N ALA A 40 SHEET 3 AA1 8 ILE A 30 SER A 33 1 N SER A 33 O GLU A 49 SHEET 4 AA1 8 GLY A 181 MET A 187 -1 O ILE A 182 N LEU A 32 SHEET 5 AA1 8 ARG A 99 PHE A 106 -1 N MET A 101 O ILE A 185 SHEET 6 AA1 8 LEU A 148 LEU A 154 -1 O LEU A 154 N HIS A 100 SHEET 7 AA1 8 LEU A 211 ASN A 218 -1 O THR A 213 N GLU A 151 SHEET 8 AA1 8 TYR A 238 ASN A 239 1 O TYR A 238 N ARG A 216 SHEET 1 AA210 ALA A 40 VAL A 41 0 SHEET 2 AA210 LYS A 47 PRO A 50 -1 O TRP A 48 N ALA A 40 SHEET 3 AA210 ILE A 30 SER A 33 1 N SER A 33 O GLU A 49 SHEET 4 AA210 GLY A 181 MET A 187 -1 O ILE A 182 N LEU A 32 SHEET 5 AA210 ARG A 99 PHE A 106 -1 N MET A 101 O ILE A 185 SHEET 6 AA210 LEU A 148 LEU A 154 -1 O LEU A 154 N HIS A 100 SHEET 7 AA210 LEU A 211 ASN A 218 -1 O THR A 213 N GLU A 151 SHEET 8 AA210 GLY A 394 ILE A 400 -1 O ILE A 397 N MET A 214 SHEET 9 AA210 PHE A 304 CYS A 313 -1 N ARG A 309 O GLU A 396 SHEET 10 AA210 PRO A 353 VAL A 362 -1 O TYR A 358 N MET A 308 SHEET 1 AA3 3 VAL A 61 PRO A 64 0 SHEET 2 AA3 3 THR A 80 PHE A 84 -1 O SER A 81 N ALA A 63 SHEET 3 AA3 3 ALA A 177 ILE A 179 -1 O ALA A 177 N PHE A 84 SHEET 1 AA4 4 ALA A 88 PRO A 93 0 SHEET 2 AA4 4 VAL A 161 PRO A 168 -1 O PHE A 166 N ALA A 88 SHEET 3 AA4 4 PHE A 121 ALA A 125 -1 N SER A 122 O THR A 167 SHEET 4 AA4 4 LEU A 128 PHE A 134 -1 O LEU A 130 N VAL A 123 SHEET 1 AA5 3 VAL A 251 GLN A 254 0 SHEET 2 AA5 3 THR A 278 SER A 281 -1 O SER A 281 N VAL A 251 SHEET 3 AA5 3 GLN A 391 LEU A 392 -1 O LEU A 392 N ARG A 280 SHEET 1 AA6 4 LEU A 294 GLN A 299 0 SHEET 2 AA6 4 GLU A 372 PRO A 379 -1 O MET A 377 N LEU A 294 SHEET 3 AA6 4 PHE A 325 ILE A 329 -1 N PHE A 328 O GLN A 376 SHEET 4 AA6 4 ARG A 332 GLN A 335 -1 O GLN A 335 N ILE A 327 LINK ND2 ASN A 133 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 293 C1 NAG C 1 1555 1555 1.42 LINK ND2 ASN A 303 C1 NAG A 508 1555 1555 1.43 LINK ND2 ASN A 331 C1 NAG A 509 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.41 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK OG SER A 33 CA CA A 502 1555 1555 2.50 LINK O CYS A 34 CA CA A 502 1555 1555 2.46 LINK O PRO A 77 CA CA A 502 1555 1555 2.38 LINK O THR A 80 CA CA A 502 1555 1555 2.39 LINK OG1 THR A 80 CA CA A 502 1555 1555 2.40 LINK O ASN A 180 CA CA A 502 1555 1555 2.46 LINK OD1 ASN A 218 CA CA A 501 1555 1555 2.34 LINK O VAL A 219 CA CA A 501 1555 1555 2.50 LINK O VAL A 275 CA CA A 501 1555 1555 2.46 LINK O THR A 278 CA CA A 501 1555 1555 2.42 LINK OG1 THR A 278 CA CA A 501 1555 1555 2.39 LINK O ASN A 393 CA CA A 501 1555 1555 2.29 CISPEP 1 VAL A 76 PRO A 77 0 4.76 CRYST1 123.566 41.766 93.371 90.00 117.37 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008093 0.000000 0.004189 0.00000 SCALE2 0.000000 0.023943 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012060 0.00000