data_6FIV # _entry.id 6FIV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6FIV pdb_00006fiv 10.2210/pdb6fiv/pdb RCSB RCSB000199 ? ? WWPDB D_1000000199 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-12-09 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Source and taxonomy' 7 3 'Structure model' 'Structure summary' 8 3 'Structure model' 'Version format compliance' 9 4 'Structure model' Other 10 5 'Structure model' Advisory 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Database references' 13 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 6FIV _pdbx_database_status.recvd_initial_deposition_date 1998-12-02 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, M.' 1 'Lee, T.' 2 'Morris, G.' 3 'Laco, G.' 4 'Wong, C.' 5 'Olson, A.' 6 'Elder, J.' 7 'Wlodawer, A.' 8 'Gustchina, A.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease' Proteins 38 29 40 2000 PSFGEY US 0887-3585 0867 ? 10651036 '10.1002/(SICI)1097-0134(20000101)38:1<29::AID-PROT4>3.0.CO;2-N' 1 'Structural Studies of HIV and Fiv Proteases Complexed with an Efficient Inhibitor of Fiv Pr' Nat.Struct.Biol. 2 480 ? 1995 NSBIEW US 1072-8368 2024 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, M.' 1 ? primary 'Morris, G.M.' 2 ? primary 'Lee, T.' 3 ? primary 'Laco, G.S.' 4 ? primary 'Wong, C.H.' 5 ? primary 'Olson, A.J.' 6 ? primary 'Elder, J.H.' 7 ? primary 'Wlodawer, A.' 8 ? primary 'Gustchina, A.' 9 ? 1 'Wlodawer, A.' 10 ? 1 'Gustchina, A.' 11 ? 1 'Reshetnikova, L.' 12 ? 1 'Lubkowski, J.' 13 ? 1 'Zdanov, A.' 14 ? 1 'Hui, K.' 15 ? 1 'Angleton, E.' 16 ? 1 'Farmerie, W.' 17 ? 1 'Goodenow, M.' 18 ? 1 'Bhatt, D.' 19 ? 1 'Zhang, L.' 20 ? 1 'Dunn, B.' 21 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man RETROPEPSIN 12813.828 1 3.4.23.16 ? ? 'COMPLEXED WITH TL-3-093' 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn ;benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate ; 909.077 1 ? ? ? ? 4 water nat water 18.015 76 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRDFQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENYKTQ CIFGNVCVLEDNSLIVPLLGRDNMIKFNIRLVM ; _entity_poly.pdbx_seq_one_letter_code_can ;VGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRDFQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENYKTQ CIFGNVCVLEDNSLIVPLLGRDNMIKFNIRLVM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 ;benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate ; 3TL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLY n 1 3 THR n 1 4 THR n 1 5 THR n 1 6 THR n 1 7 LEU n 1 8 GLU n 1 9 LYS n 1 10 ARG n 1 11 PRO n 1 12 GLU n 1 13 ILE n 1 14 LEU n 1 15 ILE n 1 16 PHE n 1 17 VAL n 1 18 ASN n 1 19 GLY n 1 20 TYR n 1 21 PRO n 1 22 ILE n 1 23 LYS n 1 24 PHE n 1 25 LEU n 1 26 LEU n 1 27 ASP n 1 28 THR n 1 29 GLY n 1 30 ALA n 1 31 ASP n 1 32 ILE n 1 33 THR n 1 34 ILE n 1 35 LEU n 1 36 ASN n 1 37 ARG n 1 38 ARG n 1 39 ASP n 1 40 PHE n 1 41 GLN n 1 42 VAL n 1 43 LYS n 1 44 ASN n 1 45 SER n 1 46 ILE n 1 47 GLU n 1 48 ASN n 1 49 GLY n 1 50 ARG n 1 51 GLN n 1 52 ASN n 1 53 MET n 1 54 ILE n 1 55 GLY n 1 56 VAL n 1 57 GLY n 1 58 GLY n 1 59 GLY n 1 60 LYS n 1 61 ARG n 1 62 GLY n 1 63 THR n 1 64 ASN n 1 65 TYR n 1 66 ILE n 1 67 ASN n 1 68 VAL n 1 69 HIS n 1 70 LEU n 1 71 GLU n 1 72 ILE n 1 73 ARG n 1 74 ASP n 1 75 GLU n 1 76 ASN n 1 77 TYR n 1 78 LYS n 1 79 THR n 1 80 GLN n 1 81 CYS n 1 82 ILE n 1 83 PHE n 1 84 GLY n 1 85 ASN n 1 86 VAL n 1 87 CYS n 1 88 VAL n 1 89 LEU n 1 90 GLU n 1 91 ASP n 1 92 ASN n 1 93 SER n 1 94 LEU n 1 95 ILE n 1 96 VAL n 1 97 PRO n 1 98 LEU n 1 99 LEU n 1 100 GLY n 1 101 ARG n 1 102 ASP n 1 103 ASN n 1 104 MET n 1 105 ILE n 1 106 LYS n 1 107 PHE n 1 108 ASN n 1 109 ILE n 1 110 ARG n 1 111 LEU n 1 112 VAL n 1 113 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Feline immunodeficiency virus' _entity_src_gen.gene_src_strain '(isolate Petaluma)' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Feline immunodeficiency virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11674 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3TL peptide-like . ;benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate ; 'TL-3, C2 symmetric inhibitor' 'C50 H64 N6 O10' 909.077 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 4 ? ? ? A . n A 1 2 GLY 2 5 5 GLY GLY A . n A 1 3 THR 3 6 6 THR THR A . n A 1 4 THR 4 7 7 THR THR A . n A 1 5 THR 5 8 8 THR THR A . n A 1 6 THR 6 9 9 THR THR A . n A 1 7 LEU 7 10 10 LEU LEU A . n A 1 8 GLU 8 11 11 GLU GLU A . n A 1 9 LYS 9 12 12 LYS LYS A . n A 1 10 ARG 10 13 13 ARG ARG A . n A 1 11 PRO 11 14 14 PRO PRO A . n A 1 12 GLU 12 15 15 GLU GLU A . n A 1 13 ILE 13 16 16 ILE ILE A . n A 1 14 LEU 14 17 17 LEU LEU A . n A 1 15 ILE 15 18 18 ILE ILE A . n A 1 16 PHE 16 19 19 PHE PHE A . n A 1 17 VAL 17 20 20 VAL VAL A . n A 1 18 ASN 18 21 21 ASN ASN A . n A 1 19 GLY 19 22 22 GLY GLY A . n A 1 20 TYR 20 23 23 TYR TYR A . n A 1 21 PRO 21 24 24 PRO PRO A . n A 1 22 ILE 22 25 25 ILE ILE A . n A 1 23 LYS 23 26 26 LYS LYS A . n A 1 24 PHE 24 27 27 PHE PHE A . n A 1 25 LEU 25 28 28 LEU LEU A . n A 1 26 LEU 26 29 29 LEU LEU A . n A 1 27 ASP 27 30 30 ASP ASP A . n A 1 28 THR 28 31 31 THR THR A . n A 1 29 GLY 29 32 32 GLY GLY A . n A 1 30 ALA 30 33 33 ALA ALA A . n A 1 31 ASP 31 34 34 ASP ASP A . n A 1 32 ILE 32 35 35 ILE ILE A . n A 1 33 THR 33 36 36 THR THR A . n A 1 34 ILE 34 37 37 ILE ILE A . n A 1 35 LEU 35 38 38 LEU LEU A . n A 1 36 ASN 36 39 39 ASN ASN A . n A 1 37 ARG 37 40 40 ARG ARG A . n A 1 38 ARG 38 41 41 ARG ARG A . n A 1 39 ASP 39 42 42 ASP ASP A . n A 1 40 PHE 40 43 43 PHE PHE A . n A 1 41 GLN 41 44 44 GLN GLN A . n A 1 42 VAL 42 45 45 VAL VAL A . n A 1 43 LYS 43 46 46 LYS LYS A . n A 1 44 ASN 44 47 47 ASN ASN A . n A 1 45 SER 45 48 48 SER SER A . n A 1 46 ILE 46 49 49 ILE ILE A . n A 1 47 GLU 47 50 50 GLU GLU A . n A 1 48 ASN 48 51 51 ASN ASN A . n A 1 49 GLY 49 52 52 GLY GLY A . n A 1 50 ARG 50 53 53 ARG ARG A . n A 1 51 GLN 51 54 54 GLN GLN A . n A 1 52 ASN 52 55 55 ASN ASN A . n A 1 53 MET 53 56 56 MET MET A . n A 1 54 ILE 54 57 57 ILE ILE A . n A 1 55 GLY 55 58 58 GLY GLY A . n A 1 56 VAL 56 59 59 VAL VAL A . n A 1 57 GLY 57 60 60 GLY GLY A . n A 1 58 GLY 58 61 61 GLY GLY A . n A 1 59 GLY 59 62 62 GLY GLY A . n A 1 60 LYS 60 63 63 LYS LYS A . n A 1 61 ARG 61 64 64 ARG ARG A . n A 1 62 GLY 62 65 65 GLY GLY A . n A 1 63 THR 63 66 66 THR THR A . n A 1 64 ASN 64 67 67 ASN ASN A . n A 1 65 TYR 65 68 68 TYR TYR A . n A 1 66 ILE 66 69 69 ILE ILE A . n A 1 67 ASN 67 70 70 ASN ASN A . n A 1 68 VAL 68 71 71 VAL VAL A . n A 1 69 HIS 69 72 72 HIS HIS A . n A 1 70 LEU 70 73 73 LEU LEU A . n A 1 71 GLU 71 74 74 GLU GLU A . n A 1 72 ILE 72 75 75 ILE ILE A . n A 1 73 ARG 73 76 76 ARG ARG A . n A 1 74 ASP 74 77 77 ASP ASP A . n A 1 75 GLU 75 78 78 GLU GLU A . n A 1 76 ASN 76 79 79 ASN ASN A . n A 1 77 TYR 77 80 80 TYR TYR A . n A 1 78 LYS 78 81 81 LYS LYS A . n A 1 79 THR 79 82 82 THR THR A . n A 1 80 GLN 80 83 83 GLN GLN A . n A 1 81 CYS 81 84 84 CYS CYS A . n A 1 82 ILE 82 85 85 ILE ILE A . n A 1 83 PHE 83 86 86 PHE PHE A . n A 1 84 GLY 84 87 87 GLY GLY A . n A 1 85 ASN 85 88 88 ASN ASN A . n A 1 86 VAL 86 89 89 VAL VAL A . n A 1 87 CYS 87 90 90 CYS CYS A . n A 1 88 VAL 88 91 91 VAL VAL A . n A 1 89 LEU 89 92 92 LEU LEU A . n A 1 90 GLU 90 93 93 GLU GLU A . n A 1 91 ASP 91 94 94 ASP ASP A . n A 1 92 ASN 92 95 95 ASN ASN A . n A 1 93 SER 93 96 96 SER SER A . n A 1 94 LEU 94 97 97 LEU LEU A . n A 1 95 ILE 95 98 98 ILE ILE A . n A 1 96 VAL 96 99 99 VAL VAL A . n A 1 97 PRO 97 100 100 PRO PRO A . n A 1 98 LEU 98 101 101 LEU LEU A . n A 1 99 LEU 99 102 102 LEU LEU A . n A 1 100 GLY 100 103 103 GLY GLY A . n A 1 101 ARG 101 104 104 ARG ARG A . n A 1 102 ASP 102 105 105 ASP ASP A . n A 1 103 ASN 103 106 106 ASN ASN A . n A 1 104 MET 104 107 107 MET MET A . n A 1 105 ILE 105 108 108 ILE ILE A . n A 1 106 LYS 106 109 109 LYS LYS A . n A 1 107 PHE 107 110 110 PHE PHE A . n A 1 108 ASN 108 111 111 ASN ASN A . n A 1 109 ILE 109 112 112 ILE ILE A . n A 1 110 ARG 110 113 113 ARG ARG A . n A 1 111 LEU 111 114 114 LEU LEU A . n A 1 112 VAL 112 115 115 VAL VAL A . n A 1 113 MET 113 116 116 MET MET A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 251 251 SO4 SO4 A . C 3 3TL 1 201 201 3TL 3TL A . D 4 HOH 1 301 301 HOH HOH A . D 4 HOH 2 302 302 HOH HOH A . D 4 HOH 3 303 303 HOH HOH A . D 4 HOH 4 304 304 HOH HOH A . D 4 HOH 5 305 305 HOH HOH A . D 4 HOH 6 306 306 HOH HOH A . D 4 HOH 7 307 307 HOH HOH A . D 4 HOH 8 308 308 HOH HOH A . D 4 HOH 9 309 309 HOH HOH A . D 4 HOH 10 310 310 HOH HOH A . D 4 HOH 11 311 311 HOH HOH A . D 4 HOH 12 312 312 HOH HOH A . D 4 HOH 13 313 313 HOH HOH A . D 4 HOH 14 314 314 HOH HOH A . D 4 HOH 15 315 315 HOH HOH A . D 4 HOH 16 316 316 HOH HOH A . D 4 HOH 17 317 317 HOH HOH A . D 4 HOH 18 318 318 HOH HOH A . D 4 HOH 19 319 319 HOH HOH A . D 4 HOH 20 320 320 HOH HOH A . D 4 HOH 21 321 321 HOH HOH A . D 4 HOH 22 322 322 HOH HOH A . D 4 HOH 23 323 323 HOH HOH A . D 4 HOH 24 324 324 HOH HOH A . D 4 HOH 25 325 325 HOH HOH A . D 4 HOH 26 326 326 HOH HOH A . D 4 HOH 27 327 327 HOH HOH A . D 4 HOH 28 328 328 HOH HOH A . D 4 HOH 29 329 329 HOH HOH A . D 4 HOH 30 330 330 HOH HOH A . D 4 HOH 31 331 331 HOH HOH A . D 4 HOH 32 332 332 HOH HOH A . D 4 HOH 33 333 333 HOH HOH A . D 4 HOH 34 334 334 HOH HOH A . D 4 HOH 35 335 335 HOH HOH A . D 4 HOH 36 336 336 HOH HOH A . D 4 HOH 37 337 337 HOH HOH A . D 4 HOH 38 338 338 HOH HOH A . D 4 HOH 39 339 339 HOH HOH A . D 4 HOH 40 340 340 HOH HOH A . D 4 HOH 41 341 341 HOH HOH A . D 4 HOH 42 342 342 HOH HOH A . D 4 HOH 43 343 343 HOH HOH A . D 4 HOH 44 344 344 HOH HOH A . D 4 HOH 45 345 345 HOH HOH A . D 4 HOH 46 346 346 HOH HOH A . D 4 HOH 47 347 347 HOH HOH A . D 4 HOH 48 348 348 HOH HOH A . D 4 HOH 49 349 349 HOH HOH A . D 4 HOH 50 350 350 HOH HOH A . D 4 HOH 51 351 351 HOH HOH A . D 4 HOH 52 352 352 HOH HOH A . D 4 HOH 53 353 353 HOH HOH A . D 4 HOH 54 354 354 HOH HOH A . D 4 HOH 55 355 355 HOH HOH A . D 4 HOH 56 356 356 HOH HOH A . D 4 HOH 57 357 357 HOH HOH A . D 4 HOH 58 358 358 HOH HOH A . D 4 HOH 59 359 359 HOH HOH A . D 4 HOH 60 360 360 HOH HOH A . D 4 HOH 61 361 361 HOH HOH A . D 4 HOH 62 362 362 HOH HOH A . D 4 HOH 63 363 363 HOH HOH A . D 4 HOH 64 364 364 HOH HOH A . D 4 HOH 65 365 365 HOH HOH A . D 4 HOH 66 366 366 HOH HOH A . D 4 HOH 67 367 367 HOH HOH A . D 4 HOH 68 368 368 HOH HOH A . D 4 HOH 69 369 369 HOH HOH A . D 4 HOH 70 370 370 HOH HOH A . D 4 HOH 71 371 371 HOH HOH A . D 4 HOH 72 372 372 HOH HOH A . D 4 HOH 73 373 373 HOH HOH A . D 4 HOH 74 374 374 HOH HOH A . D 4 HOH 75 375 375 HOH HOH A . D 4 HOH 76 376 376 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 64 ? CG ? A ARG 61 CG 2 1 Y 0 A ARG 64 ? CD ? A ARG 61 CD 3 1 Y 0 A ARG 64 ? NE ? A ARG 61 NE 4 1 Y 0 A ARG 64 ? CZ ? A ARG 61 CZ 5 1 Y 0 A ARG 64 ? NH1 ? A ARG 61 NH1 6 1 Y 0 A ARG 64 ? NH2 ? A ARG 61 NH2 7 1 Y 0 A ARG 76 ? NE ? A ARG 73 NE 8 1 Y 0 A ARG 76 ? CZ ? A ARG 73 CZ 9 1 Y 0 A ARG 76 ? NH1 ? A ARG 73 NH1 10 1 Y 0 A ARG 76 ? NH2 ? A ARG 73 NH2 11 1 Y 0 A GLU 78 ? CG ? A GLU 75 CG 12 1 Y 0 A GLU 78 ? CD ? A GLU 75 CD 13 1 Y 0 A GLU 78 ? OE1 ? A GLU 75 OE1 14 1 Y 0 A GLU 78 ? OE2 ? A GLU 75 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 SHELXL refinement . ? 2 SHELXL-97 refinement . ? 3 SAINT 'data reduction' . ? 4 SAINT 'data scaling' . ? 5 X-PLOR phasing . ? 6 # _cell.entry_id 6FIV _cell.length_a 50.760 _cell.length_b 50.760 _cell.length_c 73.360 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 6FIV _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 6FIV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 44.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details ;SAMPLE: 3.4MG/ML Q99V IN 25MM IMIDAZOL BUFFER AT PH 7.0 WITH 1MM EDTA AND 10MM DTT. WELL SOLUTION: 1.6M AMMONIUM SULFATE IN SODIUM ACETATE BUFFER AT PH 4.5 MIXING SAMPLE AND WELL SOLLUTION 1:1, pH 5.0 ; _exptl_crystal_grow.pdbx_pH_range 4.5-7.0 # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'SIEMENS HI-STAR' _diffrn_detector.pdbx_collection_date 1997-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 6FIV _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20. _reflns.d_resolution_high 1.90 _reflns.number_obs 8437 _reflns.number_all ? _reflns.percent_possible_obs 3.1 _reflns.pdbx_Rmerge_I_obs 0.0780000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 75 _reflns_shell.Rmerge_I_obs 0.3720000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.98 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 6FIV _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 7385 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10. _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs 82.5 _refine.ls_R_factor_obs 0.1573000 _refine.ls_R_factor_all 0.1551000 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.2657000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 11.9 _refine.ls_number_reflns_R_free 879 _refine.ls_number_parameters 4069 _refine.ls_number_restraints 3813 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;ANISOTROPIC SCALING APPLIED BY METHOD PF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56 ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 6FIV _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 2 _refine_analyze.occupancy_sum_hydrogen 0.0 _refine_analyze.occupancy_sum_non_hydrogen 991.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 891 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 76 _refine_hist.number_atoms_total 1005 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 10. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.024 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.00 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.027 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.041 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.089 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 6FIV _pdbx_refine.R_factor_all_no_cutoff 0.1551000 _pdbx_refine.R_factor_obs_no_cutoff 0.1573000 _pdbx_refine.free_R_factor_no_cutoff 0.2657000 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 11.9 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 879 _pdbx_refine.R_factor_all_4sig_cutoff 0.1469000 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1490000 _pdbx_refine.free_R_factor_4sig_cutoff 0.2513000 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 11.8 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 789 _pdbx_refine.number_reflns_obs_4sig_cutoff 6663 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 6FIV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 6FIV _struct.title 'STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 6FIV _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'FIV PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_FIVPE _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P16088 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6FIV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 113 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16088 _struct_ref_seq.db_align_beg 42 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 154 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 116 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6FIV _struct_ref_seq_dif.mon_id VAL _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 96 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P16088 _struct_ref_seq_dif.db_mon_id GLN _struct_ref_seq_dif.pdbx_seq_db_seq_num 137 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 99 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3960 ? 1 MORE -50 ? 1 'SSA (A^2)' 10580 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 48.9066666667 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 37 ? ASP A 39 ? ARG A 40 ASP A 42 5 ? 3 HELX_P HELX_P2 2 ARG A 101 ? MET A 104 ? ARG A 104 MET A 107 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_comp_id 3TL _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id C2 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id 3TL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C2 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id 3TL _struct_conn.ptnr1_auth_seq_id 201 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 3TL _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 5_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.542 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 80 ? GLY A 84 ? GLN A 83 GLY A 87 A 2 VAL A 68 ? ILE A 72 ? VAL A 71 ILE A 75 A 3 GLU A 12 ? VAL A 17 ? GLU A 15 VAL A 20 A 4 TYR A 20 ? LEU A 26 ? TYR A 23 LEU A 29 A 5 PRO A 97 ? LEU A 99 ? PRO A 100 LEU A 102 B 1 ILE A 34 ? ASN A 36 ? ILE A 37 ASN A 39 B 2 VAL A 86 ? LEU A 89 ? VAL A 89 LEU A 92 B 3 GLY A 59 ? TYR A 65 ? GLY A 62 TYR A 68 B 4 ARG A 50 ? ILE A 54 ? ARG A 53 ILE A 57 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 80 ? O GLN A 83 N ILE A 72 ? N ILE A 75 A 2 3 O GLU A 71 ? O GLU A 74 N PHE A 16 ? N PHE A 19 A 3 4 O ILE A 13 ? O ILE A 16 N PHE A 24 ? N PHE A 27 A 4 5 O LEU A 25 ? O LEU A 28 N PRO A 97 ? N PRO A 100 B 1 2 O LEU A 35 ? O LEU A 38 N CYS A 87 ? N CYS A 90 B 2 3 O VAL A 86 ? O VAL A 89 N TYR A 65 ? N TYR A 68 B 3 4 O LYS A 60 ? O LYS A 63 N MET A 53 ? N MET A 56 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 251 ? 5 'BINDING SITE FOR RESIDUE SO4 A 251' AC2 Software A 3TL 201 ? 16 'BINDING SITE FOR RESIDUE 3TL A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS A 9 ? LYS A 12 . ? 6_665 ? 2 AC1 5 ARG A 10 ? ARG A 13 . ? 6_665 ? 3 AC1 5 TYR A 20 ? TYR A 23 . ? 1_555 ? 4 AC1 5 LYS A 43 ? LYS A 46 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 364 . ? 1_555 ? 6 AC2 16 PRO A 21 ? PRO A 24 . ? 2_655 ? 7 AC2 16 ASP A 27 ? ASP A 30 . ? 1_555 ? 8 AC2 16 ASP A 27 ? ASP A 30 . ? 5_555 ? 9 AC2 16 GLY A 29 ? GLY A 32 . ? 1_555 ? 10 AC2 16 ALA A 30 ? ALA A 33 . ? 1_555 ? 11 AC2 16 ASP A 31 ? ASP A 34 . ? 1_555 ? 12 AC2 16 ASN A 52 ? ASN A 55 . ? 1_555 ? 13 AC2 16 MET A 53 ? MET A 56 . ? 1_555 ? 14 AC2 16 ILE A 54 ? ILE A 57 . ? 1_555 ? 15 AC2 16 GLY A 55 ? GLY A 58 . ? 1_555 ? 16 AC2 16 VAL A 56 ? VAL A 59 . ? 5_555 ? 17 AC2 16 VAL A 56 ? VAL A 59 . ? 1_555 ? 18 AC2 16 LEU A 98 ? LEU A 101 . ? 1_555 ? 19 AC2 16 LEU A 98 ? LEU A 101 . ? 5_555 ? 20 AC2 16 HOH D . ? HOH A 301 . ? 5_555 ? 21 AC2 16 HOH D . ? HOH A 301 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 76 ? ? O A HOH 304 ? ? 1.99 2 1 NH2 A ARG 76 ? ? O A HOH 304 ? ? 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 46 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 51.50 _pdbx_validate_torsion.psi -124.26 # _pdbx_molecule_features.prd_id PRD_000434 _pdbx_molecule_features.name 'N-[(benzyloxy)carbonyl]-L-alanyl-N-[(1R)-1-benzyl-2-oxoethyl]-L-valinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000434 _pdbx_molecule.asym_id C # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 301 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_entry_details.entry_id 6FIV _pdbx_entry_details.nonpolymer_details 'THE INHIBITOR IS A C2 SYMMETRIC HIV PROTEASE' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id VAL _pdbx_unobs_or_zero_occ_residues.auth_seq_id 4 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id VAL _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3TL C31 C N N 1 3TL O8 O N N 2 3TL O9 O N N 3 3TL CA C N N 4 3TL C C Y N 5 3TL C13 C Y N 6 3TL C14 C Y N 7 3TL C15 C Y N 8 3TL C16 C Y N 9 3TL C17 C Y N 10 3TL N4 N N N 11 3TL C18 C N S 12 3TL C19 C N N 13 3TL O4 O N N 14 3TL C20 C N N 15 3TL N2 N N N 16 3TL C10 C N S 17 3TL C11 C N N 18 3TL O2 O N N 19 3TL C12 C N N 20 3TL CG2 C N N 21 3TL CG1 C N N 22 3TL C2 C N R 23 3TL O1 O N N 24 3TL C1 C N S 25 3TL N1 N N N 26 3TL C3 C N N 27 3TL C4 C Y N 28 3TL C5 C Y N 29 3TL C9 C Y N 30 3TL C6 C Y N 31 3TL C8 C Y N 32 3TL C7 C Y N 33 3TL N51 N N N 34 3TL C51 C N S 35 3TL C52 C N R 36 3TL O51 O N N 37 3TL C53 C N N 38 3TL C54 C Y N 39 3TL C55 C Y N 40 3TL C59 C Y N 41 3TL C56 C Y N 42 3TL C58 C Y N 43 3TL C57 C Y N 44 3TL N52 N N N 45 3TL C60 C N S 46 3TL C61 C N N 47 3TL O52 O N N 48 3TL C62 C N N 49 3TL CG6 C N N 50 3TL CG5 C N N 51 3TL N54 N N N 52 3TL C68 C N S 53 3TL C69 C N N 54 3TL O54 O N N 55 3TL C70 C N N 56 3TL C81 C N N 57 3TL O58 O N N 58 3TL O59 O N N 59 3TL CA5 C N N 60 3TL C50 C Y N 61 3TL C63 C Y N 62 3TL C64 C Y N 63 3TL C65 C Y N 64 3TL C66 C Y N 65 3TL C67 C Y N 66 3TL HA1 H N N 67 3TL HA2 H N N 68 3TL H13 H N N 69 3TL H14 H N N 70 3TL H15 H N N 71 3TL H16 H N N 72 3TL H17 H N N 73 3TL HN4 H N N 74 3TL H18 H N N 75 3TL H201 H N N 76 3TL H202 H N N 77 3TL H203 H N N 78 3TL HN2 H N N 79 3TL H10 H N N 80 3TL H12 H N N 81 3TL HG21 H N N 82 3TL HG22 H N N 83 3TL HG23 H N N 84 3TL HG11 H N N 85 3TL HG12 H N N 86 3TL HG13 H N N 87 3TL H2 H N N 88 3TL HO1 H N N 89 3TL H1 H N N 90 3TL HN1 H N N 91 3TL H31 H N N 92 3TL H32 H N N 93 3TL H5 H N N 94 3TL H9 H N N 95 3TL H6 H N N 96 3TL H8 H N N 97 3TL H7 H N N 98 3TL HN51 H N N 99 3TL H51 H N N 100 3TL H52 H N N 101 3TL HO51 H N N 102 3TL H531 H N N 103 3TL H532 H N N 104 3TL H55 H N N 105 3TL H59 H N N 106 3TL H56 H N N 107 3TL H58 H N N 108 3TL H57 H N N 109 3TL HN52 H N N 110 3TL H60 H N N 111 3TL H62 H N N 112 3TL HG61 H N N 113 3TL HG62 H N N 114 3TL HG63 H N N 115 3TL HG51 H N N 116 3TL HG52 H N N 117 3TL HG53 H N N 118 3TL HN54 H N N 119 3TL H68 H N N 120 3TL H701 H N N 121 3TL H702 H N N 122 3TL H703 H N N 123 3TL HA51 H N N 124 3TL HA52 H N N 125 3TL H63 H N N 126 3TL H64 H N N 127 3TL H65 H N N 128 3TL H66 H N N 129 3TL H67 H N N 130 ALA N N N N 131 ALA CA C N S 132 ALA C C N N 133 ALA O O N N 134 ALA CB C N N 135 ALA OXT O N N 136 ALA H H N N 137 ALA H2 H N N 138 ALA HA H N N 139 ALA HB1 H N N 140 ALA HB2 H N N 141 ALA HB3 H N N 142 ALA HXT H N N 143 ARG N N N N 144 ARG CA C N S 145 ARG C C N N 146 ARG O O N N 147 ARG CB C N N 148 ARG CG C N N 149 ARG CD C N N 150 ARG NE N N N 151 ARG CZ C N N 152 ARG NH1 N N N 153 ARG NH2 N N N 154 ARG OXT O N N 155 ARG H H N N 156 ARG H2 H N N 157 ARG HA H N N 158 ARG HB2 H N N 159 ARG HB3 H N N 160 ARG HG2 H N N 161 ARG HG3 H N N 162 ARG HD2 H N N 163 ARG HD3 H N N 164 ARG HE H N N 165 ARG HH11 H N N 166 ARG HH12 H N N 167 ARG HH21 H N N 168 ARG HH22 H N N 169 ARG HXT H N N 170 ASN N N N N 171 ASN CA C N S 172 ASN C C N N 173 ASN O O N N 174 ASN CB C N N 175 ASN CG C N N 176 ASN OD1 O N N 177 ASN ND2 N N N 178 ASN OXT O N N 179 ASN H H N N 180 ASN H2 H N N 181 ASN HA H N N 182 ASN HB2 H N N 183 ASN HB3 H N N 184 ASN HD21 H N N 185 ASN HD22 H N N 186 ASN HXT H N N 187 ASP N N N N 188 ASP CA C N S 189 ASP C C N N 190 ASP O O N N 191 ASP CB C N N 192 ASP CG C N N 193 ASP OD1 O N N 194 ASP OD2 O N N 195 ASP OXT O N N 196 ASP H H N N 197 ASP H2 H N N 198 ASP HA H N N 199 ASP HB2 H N N 200 ASP HB3 H N N 201 ASP HD2 H N N 202 ASP HXT H N N 203 CYS N N N N 204 CYS CA C N R 205 CYS C C N N 206 CYS O O N N 207 CYS CB C N N 208 CYS SG S N N 209 CYS OXT O N N 210 CYS H H N N 211 CYS H2 H N N 212 CYS HA H N N 213 CYS HB2 H N N 214 CYS HB3 H N N 215 CYS HG H N N 216 CYS HXT H N N 217 GLN N N N N 218 GLN CA C N S 219 GLN C C N N 220 GLN O O N N 221 GLN CB C N N 222 GLN CG C N N 223 GLN CD C N N 224 GLN OE1 O N N 225 GLN NE2 N N N 226 GLN OXT O N N 227 GLN H H N N 228 GLN H2 H N N 229 GLN HA H N N 230 GLN HB2 H N N 231 GLN HB3 H N N 232 GLN HG2 H N N 233 GLN HG3 H N N 234 GLN HE21 H N N 235 GLN HE22 H N N 236 GLN HXT H N N 237 GLU N N N N 238 GLU CA C N S 239 GLU C C N N 240 GLU O O N N 241 GLU CB C N N 242 GLU CG C N N 243 GLU CD C N N 244 GLU OE1 O N N 245 GLU OE2 O N N 246 GLU OXT O N N 247 GLU H H N N 248 GLU H2 H N N 249 GLU HA H N N 250 GLU HB2 H N N 251 GLU HB3 H N N 252 GLU HG2 H N N 253 GLU HG3 H N N 254 GLU HE2 H N N 255 GLU HXT H N N 256 GLY N N N N 257 GLY CA C N N 258 GLY C C N N 259 GLY O O N N 260 GLY OXT O N N 261 GLY H H N N 262 GLY H2 H N N 263 GLY HA2 H N N 264 GLY HA3 H N N 265 GLY HXT H N N 266 HIS N N N N 267 HIS CA C N S 268 HIS C C N N 269 HIS O O N N 270 HIS CB C N N 271 HIS CG C Y N 272 HIS ND1 N Y N 273 HIS CD2 C Y N 274 HIS CE1 C Y N 275 HIS NE2 N Y N 276 HIS OXT O N N 277 HIS H H N N 278 HIS H2 H N N 279 HIS HA H N N 280 HIS HB2 H N N 281 HIS HB3 H N N 282 HIS HD1 H N N 283 HIS HD2 H N N 284 HIS HE1 H N N 285 HIS HE2 H N N 286 HIS HXT H N N 287 HOH O O N N 288 HOH H1 H N N 289 HOH H2 H N N 290 ILE N N N N 291 ILE CA C N S 292 ILE C C N N 293 ILE O O N N 294 ILE CB C N S 295 ILE CG1 C N N 296 ILE CG2 C N N 297 ILE CD1 C N N 298 ILE OXT O N N 299 ILE H H N N 300 ILE H2 H N N 301 ILE HA H N N 302 ILE HB H N N 303 ILE HG12 H N N 304 ILE HG13 H N N 305 ILE HG21 H N N 306 ILE HG22 H N N 307 ILE HG23 H N N 308 ILE HD11 H N N 309 ILE HD12 H N N 310 ILE HD13 H N N 311 ILE HXT H N N 312 LEU N N N N 313 LEU CA C N S 314 LEU C C N N 315 LEU O O N N 316 LEU CB C N N 317 LEU CG C N N 318 LEU CD1 C N N 319 LEU CD2 C N N 320 LEU OXT O N N 321 LEU H H N N 322 LEU H2 H N N 323 LEU HA H N N 324 LEU HB2 H N N 325 LEU HB3 H N N 326 LEU HG H N N 327 LEU HD11 H N N 328 LEU HD12 H N N 329 LEU HD13 H N N 330 LEU HD21 H N N 331 LEU HD22 H N N 332 LEU HD23 H N N 333 LEU HXT H N N 334 LYS N N N N 335 LYS CA C N S 336 LYS C C N N 337 LYS O O N N 338 LYS CB C N N 339 LYS CG C N N 340 LYS CD C N N 341 LYS CE C N N 342 LYS NZ N N N 343 LYS OXT O N N 344 LYS H H N N 345 LYS H2 H N N 346 LYS HA H N N 347 LYS HB2 H N N 348 LYS HB3 H N N 349 LYS HG2 H N N 350 LYS HG3 H N N 351 LYS HD2 H N N 352 LYS HD3 H N N 353 LYS HE2 H N N 354 LYS HE3 H N N 355 LYS HZ1 H N N 356 LYS HZ2 H N N 357 LYS HZ3 H N N 358 LYS HXT H N N 359 MET N N N N 360 MET CA C N S 361 MET C C N N 362 MET O O N N 363 MET CB C N N 364 MET CG C N N 365 MET SD S N N 366 MET CE C N N 367 MET OXT O N N 368 MET H H N N 369 MET H2 H N N 370 MET HA H N N 371 MET HB2 H N N 372 MET HB3 H N N 373 MET HG2 H N N 374 MET HG3 H N N 375 MET HE1 H N N 376 MET HE2 H N N 377 MET HE3 H N N 378 MET HXT H N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 PRO N N N N 403 PRO CA C N S 404 PRO C C N N 405 PRO O O N N 406 PRO CB C N N 407 PRO CG C N N 408 PRO CD C N N 409 PRO OXT O N N 410 PRO H H N N 411 PRO HA H N N 412 PRO HB2 H N N 413 PRO HB3 H N N 414 PRO HG2 H N N 415 PRO HG3 H N N 416 PRO HD2 H N N 417 PRO HD3 H N N 418 PRO HXT H N N 419 SER N N N N 420 SER CA C N S 421 SER C C N N 422 SER O O N N 423 SER CB C N N 424 SER OG O N N 425 SER OXT O N N 426 SER H H N N 427 SER H2 H N N 428 SER HA H N N 429 SER HB2 H N N 430 SER HB3 H N N 431 SER HG H N N 432 SER HXT H N N 433 SO4 S S N N 434 SO4 O1 O N N 435 SO4 O2 O N N 436 SO4 O3 O N N 437 SO4 O4 O N N 438 THR N N N N 439 THR CA C N S 440 THR C C N N 441 THR O O N N 442 THR CB C N R 443 THR OG1 O N N 444 THR CG2 C N N 445 THR OXT O N N 446 THR H H N N 447 THR H2 H N N 448 THR HA H N N 449 THR HB H N N 450 THR HG1 H N N 451 THR HG21 H N N 452 THR HG22 H N N 453 THR HG23 H N N 454 THR HXT H N N 455 TYR N N N N 456 TYR CA C N S 457 TYR C C N N 458 TYR O O N N 459 TYR CB C N N 460 TYR CG C Y N 461 TYR CD1 C Y N 462 TYR CD2 C Y N 463 TYR CE1 C Y N 464 TYR CE2 C Y N 465 TYR CZ C Y N 466 TYR OH O N N 467 TYR OXT O N N 468 TYR H H N N 469 TYR H2 H N N 470 TYR HA H N N 471 TYR HB2 H N N 472 TYR HB3 H N N 473 TYR HD1 H N N 474 TYR HD2 H N N 475 TYR HE1 H N N 476 TYR HE2 H N N 477 TYR HH H N N 478 TYR HXT H N N 479 VAL N N N N 480 VAL CA C N S 481 VAL C C N N 482 VAL O O N N 483 VAL CB C N N 484 VAL CG1 C N N 485 VAL CG2 C N N 486 VAL OXT O N N 487 VAL H H N N 488 VAL H2 H N N 489 VAL HA H N N 490 VAL HB H N N 491 VAL HG11 H N N 492 VAL HG12 H N N 493 VAL HG13 H N N 494 VAL HG21 H N N 495 VAL HG22 H N N 496 VAL HG23 H N N 497 VAL HXT H N N 498 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3TL C31 O8 doub N N 1 3TL C31 O9 sing N N 2 3TL C31 N4 sing N N 3 3TL O9 CA sing N N 4 3TL CA C sing N N 5 3TL CA HA1 sing N N 6 3TL CA HA2 sing N N 7 3TL C C13 doub Y N 8 3TL C C17 sing Y N 9 3TL C13 C14 sing Y N 10 3TL C13 H13 sing N N 11 3TL C14 C15 doub Y N 12 3TL C14 H14 sing N N 13 3TL C15 C16 sing Y N 14 3TL C15 H15 sing N N 15 3TL C16 C17 doub Y N 16 3TL C16 H16 sing N N 17 3TL C17 H17 sing N N 18 3TL N4 C18 sing N N 19 3TL N4 HN4 sing N N 20 3TL C18 C19 sing N N 21 3TL C18 C20 sing N N 22 3TL C18 H18 sing N N 23 3TL C19 O4 doub N N 24 3TL C19 N2 sing N N 25 3TL C20 H201 sing N N 26 3TL C20 H202 sing N N 27 3TL C20 H203 sing N N 28 3TL N2 C10 sing N N 29 3TL N2 HN2 sing N N 30 3TL C10 C11 sing N N 31 3TL C10 C12 sing N N 32 3TL C10 H10 sing N N 33 3TL C11 O2 doub N N 34 3TL C11 N1 sing N N 35 3TL C12 CG2 sing N N 36 3TL C12 CG1 sing N N 37 3TL C12 H12 sing N N 38 3TL CG2 HG21 sing N N 39 3TL CG2 HG22 sing N N 40 3TL CG2 HG23 sing N N 41 3TL CG1 HG11 sing N N 42 3TL CG1 HG12 sing N N 43 3TL CG1 HG13 sing N N 44 3TL C2 O1 sing N N 45 3TL C2 C1 sing N N 46 3TL C2 H2 sing N N 47 3TL C2 C52 sing N N 48 3TL O1 HO1 sing N N 49 3TL C1 N1 sing N N 50 3TL C1 C3 sing N N 51 3TL C1 H1 sing N N 52 3TL N1 HN1 sing N N 53 3TL C3 C4 sing N N 54 3TL C3 H31 sing N N 55 3TL C3 H32 sing N N 56 3TL C4 C5 doub Y N 57 3TL C4 C9 sing Y N 58 3TL C5 C6 sing Y N 59 3TL C5 H5 sing N N 60 3TL C9 C8 doub Y N 61 3TL C9 H9 sing N N 62 3TL C6 C7 doub Y N 63 3TL C6 H6 sing N N 64 3TL C8 C7 sing Y N 65 3TL C8 H8 sing N N 66 3TL C7 H7 sing N N 67 3TL N51 C51 sing N N 68 3TL N51 HN51 sing N N 69 3TL N51 C61 sing N N 70 3TL C51 C52 sing N N 71 3TL C51 C53 sing N N 72 3TL C51 H51 sing N N 73 3TL C52 O51 sing N N 74 3TL C52 H52 sing N N 75 3TL O51 HO51 sing N N 76 3TL C53 C54 sing N N 77 3TL C53 H531 sing N N 78 3TL C53 H532 sing N N 79 3TL C54 C55 doub Y N 80 3TL C54 C59 sing Y N 81 3TL C55 C56 sing Y N 82 3TL C55 H55 sing N N 83 3TL C59 C58 doub Y N 84 3TL C59 H59 sing N N 85 3TL C56 C57 doub Y N 86 3TL C56 H56 sing N N 87 3TL C58 C57 sing Y N 88 3TL C58 H58 sing N N 89 3TL C57 H57 sing N N 90 3TL N52 C60 sing N N 91 3TL N52 HN52 sing N N 92 3TL N52 C69 sing N N 93 3TL C60 C61 sing N N 94 3TL C60 C62 sing N N 95 3TL C60 H60 sing N N 96 3TL C61 O52 doub N N 97 3TL C62 CG6 sing N N 98 3TL C62 CG5 sing N N 99 3TL C62 H62 sing N N 100 3TL CG6 HG61 sing N N 101 3TL CG6 HG62 sing N N 102 3TL CG6 HG63 sing N N 103 3TL CG5 HG51 sing N N 104 3TL CG5 HG52 sing N N 105 3TL CG5 HG53 sing N N 106 3TL N54 C68 sing N N 107 3TL N54 HN54 sing N N 108 3TL N54 C81 sing N N 109 3TL C68 C69 sing N N 110 3TL C68 C70 sing N N 111 3TL C68 H68 sing N N 112 3TL C69 O54 doub N N 113 3TL C70 H701 sing N N 114 3TL C70 H702 sing N N 115 3TL C70 H703 sing N N 116 3TL C81 O58 doub N N 117 3TL C81 O59 sing N N 118 3TL O59 CA5 sing N N 119 3TL CA5 C50 sing N N 120 3TL CA5 HA51 sing N N 121 3TL CA5 HA52 sing N N 122 3TL C50 C63 doub Y N 123 3TL C50 C67 sing Y N 124 3TL C63 C64 sing Y N 125 3TL C63 H63 sing N N 126 3TL C64 C65 doub Y N 127 3TL C64 H64 sing N N 128 3TL C65 C66 sing Y N 129 3TL C65 H65 sing N N 130 3TL C66 C67 doub Y N 131 3TL C66 H66 sing N N 132 3TL C67 H67 sing N N 133 ALA N CA sing N N 134 ALA N H sing N N 135 ALA N H2 sing N N 136 ALA CA C sing N N 137 ALA CA CB sing N N 138 ALA CA HA sing N N 139 ALA C O doub N N 140 ALA C OXT sing N N 141 ALA CB HB1 sing N N 142 ALA CB HB2 sing N N 143 ALA CB HB3 sing N N 144 ALA OXT HXT sing N N 145 ARG N CA sing N N 146 ARG N H sing N N 147 ARG N H2 sing N N 148 ARG CA C sing N N 149 ARG CA CB sing N N 150 ARG CA HA sing N N 151 ARG C O doub N N 152 ARG C OXT sing N N 153 ARG CB CG sing N N 154 ARG CB HB2 sing N N 155 ARG CB HB3 sing N N 156 ARG CG CD sing N N 157 ARG CG HG2 sing N N 158 ARG CG HG3 sing N N 159 ARG CD NE sing N N 160 ARG CD HD2 sing N N 161 ARG CD HD3 sing N N 162 ARG NE CZ sing N N 163 ARG NE HE sing N N 164 ARG CZ NH1 sing N N 165 ARG CZ NH2 doub N N 166 ARG NH1 HH11 sing N N 167 ARG NH1 HH12 sing N N 168 ARG NH2 HH21 sing N N 169 ARG NH2 HH22 sing N N 170 ARG OXT HXT sing N N 171 ASN N CA sing N N 172 ASN N H sing N N 173 ASN N H2 sing N N 174 ASN CA C sing N N 175 ASN CA CB sing N N 176 ASN CA HA sing N N 177 ASN C O doub N N 178 ASN C OXT sing N N 179 ASN CB CG sing N N 180 ASN CB HB2 sing N N 181 ASN CB HB3 sing N N 182 ASN CG OD1 doub N N 183 ASN CG ND2 sing N N 184 ASN ND2 HD21 sing N N 185 ASN ND2 HD22 sing N N 186 ASN OXT HXT sing N N 187 ASP N CA sing N N 188 ASP N H sing N N 189 ASP N H2 sing N N 190 ASP CA C sing N N 191 ASP CA CB sing N N 192 ASP CA HA sing N N 193 ASP C O doub N N 194 ASP C OXT sing N N 195 ASP CB CG sing N N 196 ASP CB HB2 sing N N 197 ASP CB HB3 sing N N 198 ASP CG OD1 doub N N 199 ASP CG OD2 sing N N 200 ASP OD2 HD2 sing N N 201 ASP OXT HXT sing N N 202 CYS N CA sing N N 203 CYS N H sing N N 204 CYS N H2 sing N N 205 CYS CA C sing N N 206 CYS CA CB sing N N 207 CYS CA HA sing N N 208 CYS C O doub N N 209 CYS C OXT sing N N 210 CYS CB SG sing N N 211 CYS CB HB2 sing N N 212 CYS CB HB3 sing N N 213 CYS SG HG sing N N 214 CYS OXT HXT sing N N 215 GLN N CA sing N N 216 GLN N H sing N N 217 GLN N H2 sing N N 218 GLN CA C sing N N 219 GLN CA CB sing N N 220 GLN CA HA sing N N 221 GLN C O doub N N 222 GLN C OXT sing N N 223 GLN CB CG sing N N 224 GLN CB HB2 sing N N 225 GLN CB HB3 sing N N 226 GLN CG CD sing N N 227 GLN CG HG2 sing N N 228 GLN CG HG3 sing N N 229 GLN CD OE1 doub N N 230 GLN CD NE2 sing N N 231 GLN NE2 HE21 sing N N 232 GLN NE2 HE22 sing N N 233 GLN OXT HXT sing N N 234 GLU N CA sing N N 235 GLU N H sing N N 236 GLU N H2 sing N N 237 GLU CA C sing N N 238 GLU CA CB sing N N 239 GLU CA HA sing N N 240 GLU C O doub N N 241 GLU C OXT sing N N 242 GLU CB CG sing N N 243 GLU CB HB2 sing N N 244 GLU CB HB3 sing N N 245 GLU CG CD sing N N 246 GLU CG HG2 sing N N 247 GLU CG HG3 sing N N 248 GLU CD OE1 doub N N 249 GLU CD OE2 sing N N 250 GLU OE2 HE2 sing N N 251 GLU OXT HXT sing N N 252 GLY N CA sing N N 253 GLY N H sing N N 254 GLY N H2 sing N N 255 GLY CA C sing N N 256 GLY CA HA2 sing N N 257 GLY CA HA3 sing N N 258 GLY C O doub N N 259 GLY C OXT sing N N 260 GLY OXT HXT sing N N 261 HIS N CA sing N N 262 HIS N H sing N N 263 HIS N H2 sing N N 264 HIS CA C sing N N 265 HIS CA CB sing N N 266 HIS CA HA sing N N 267 HIS C O doub N N 268 HIS C OXT sing N N 269 HIS CB CG sing N N 270 HIS CB HB2 sing N N 271 HIS CB HB3 sing N N 272 HIS CG ND1 sing Y N 273 HIS CG CD2 doub Y N 274 HIS ND1 CE1 doub Y N 275 HIS ND1 HD1 sing N N 276 HIS CD2 NE2 sing Y N 277 HIS CD2 HD2 sing N N 278 HIS CE1 NE2 sing Y N 279 HIS CE1 HE1 sing N N 280 HIS NE2 HE2 sing N N 281 HIS OXT HXT sing N N 282 HOH O H1 sing N N 283 HOH O H2 sing N N 284 ILE N CA sing N N 285 ILE N H sing N N 286 ILE N H2 sing N N 287 ILE CA C sing N N 288 ILE CA CB sing N N 289 ILE CA HA sing N N 290 ILE C O doub N N 291 ILE C OXT sing N N 292 ILE CB CG1 sing N N 293 ILE CB CG2 sing N N 294 ILE CB HB sing N N 295 ILE CG1 CD1 sing N N 296 ILE CG1 HG12 sing N N 297 ILE CG1 HG13 sing N N 298 ILE CG2 HG21 sing N N 299 ILE CG2 HG22 sing N N 300 ILE CG2 HG23 sing N N 301 ILE CD1 HD11 sing N N 302 ILE CD1 HD12 sing N N 303 ILE CD1 HD13 sing N N 304 ILE OXT HXT sing N N 305 LEU N CA sing N N 306 LEU N H sing N N 307 LEU N H2 sing N N 308 LEU CA C sing N N 309 LEU CA CB sing N N 310 LEU CA HA sing N N 311 LEU C O doub N N 312 LEU C OXT sing N N 313 LEU CB CG sing N N 314 LEU CB HB2 sing N N 315 LEU CB HB3 sing N N 316 LEU CG CD1 sing N N 317 LEU CG CD2 sing N N 318 LEU CG HG sing N N 319 LEU CD1 HD11 sing N N 320 LEU CD1 HD12 sing N N 321 LEU CD1 HD13 sing N N 322 LEU CD2 HD21 sing N N 323 LEU CD2 HD22 sing N N 324 LEU CD2 HD23 sing N N 325 LEU OXT HXT sing N N 326 LYS N CA sing N N 327 LYS N H sing N N 328 LYS N H2 sing N N 329 LYS CA C sing N N 330 LYS CA CB sing N N 331 LYS CA HA sing N N 332 LYS C O doub N N 333 LYS C OXT sing N N 334 LYS CB CG sing N N 335 LYS CB HB2 sing N N 336 LYS CB HB3 sing N N 337 LYS CG CD sing N N 338 LYS CG HG2 sing N N 339 LYS CG HG3 sing N N 340 LYS CD CE sing N N 341 LYS CD HD2 sing N N 342 LYS CD HD3 sing N N 343 LYS CE NZ sing N N 344 LYS CE HE2 sing N N 345 LYS CE HE3 sing N N 346 LYS NZ HZ1 sing N N 347 LYS NZ HZ2 sing N N 348 LYS NZ HZ3 sing N N 349 LYS OXT HXT sing N N 350 MET N CA sing N N 351 MET N H sing N N 352 MET N H2 sing N N 353 MET CA C sing N N 354 MET CA CB sing N N 355 MET CA HA sing N N 356 MET C O doub N N 357 MET C OXT sing N N 358 MET CB CG sing N N 359 MET CB HB2 sing N N 360 MET CB HB3 sing N N 361 MET CG SD sing N N 362 MET CG HG2 sing N N 363 MET CG HG3 sing N N 364 MET SD CE sing N N 365 MET CE HE1 sing N N 366 MET CE HE2 sing N N 367 MET CE HE3 sing N N 368 MET OXT HXT sing N N 369 PHE N CA sing N N 370 PHE N H sing N N 371 PHE N H2 sing N N 372 PHE CA C sing N N 373 PHE CA CB sing N N 374 PHE CA HA sing N N 375 PHE C O doub N N 376 PHE C OXT sing N N 377 PHE CB CG sing N N 378 PHE CB HB2 sing N N 379 PHE CB HB3 sing N N 380 PHE CG CD1 doub Y N 381 PHE CG CD2 sing Y N 382 PHE CD1 CE1 sing Y N 383 PHE CD1 HD1 sing N N 384 PHE CD2 CE2 doub Y N 385 PHE CD2 HD2 sing N N 386 PHE CE1 CZ doub Y N 387 PHE CE1 HE1 sing N N 388 PHE CE2 CZ sing Y N 389 PHE CE2 HE2 sing N N 390 PHE CZ HZ sing N N 391 PHE OXT HXT sing N N 392 PRO N CA sing N N 393 PRO N CD sing N N 394 PRO N H sing N N 395 PRO CA C sing N N 396 PRO CA CB sing N N 397 PRO CA HA sing N N 398 PRO C O doub N N 399 PRO C OXT sing N N 400 PRO CB CG sing N N 401 PRO CB HB2 sing N N 402 PRO CB HB3 sing N N 403 PRO CG CD sing N N 404 PRO CG HG2 sing N N 405 PRO CG HG3 sing N N 406 PRO CD HD2 sing N N 407 PRO CD HD3 sing N N 408 PRO OXT HXT sing N N 409 SER N CA sing N N 410 SER N H sing N N 411 SER N H2 sing N N 412 SER CA C sing N N 413 SER CA CB sing N N 414 SER CA HA sing N N 415 SER C O doub N N 416 SER C OXT sing N N 417 SER CB OG sing N N 418 SER CB HB2 sing N N 419 SER CB HB3 sing N N 420 SER OG HG sing N N 421 SER OXT HXT sing N N 422 SO4 S O1 doub N N 423 SO4 S O2 doub N N 424 SO4 S O3 sing N N 425 SO4 S O4 sing N N 426 THR N CA sing N N 427 THR N H sing N N 428 THR N H2 sing N N 429 THR CA C sing N N 430 THR CA CB sing N N 431 THR CA HA sing N N 432 THR C O doub N N 433 THR C OXT sing N N 434 THR CB OG1 sing N N 435 THR CB CG2 sing N N 436 THR CB HB sing N N 437 THR OG1 HG1 sing N N 438 THR CG2 HG21 sing N N 439 THR CG2 HG22 sing N N 440 THR CG2 HG23 sing N N 441 THR OXT HXT sing N N 442 TYR N CA sing N N 443 TYR N H sing N N 444 TYR N H2 sing N N 445 TYR CA C sing N N 446 TYR CA CB sing N N 447 TYR CA HA sing N N 448 TYR C O doub N N 449 TYR C OXT sing N N 450 TYR CB CG sing N N 451 TYR CB HB2 sing N N 452 TYR CB HB3 sing N N 453 TYR CG CD1 doub Y N 454 TYR CG CD2 sing Y N 455 TYR CD1 CE1 sing Y N 456 TYR CD1 HD1 sing N N 457 TYR CD2 CE2 doub Y N 458 TYR CD2 HD2 sing N N 459 TYR CE1 CZ doub Y N 460 TYR CE1 HE1 sing N N 461 TYR CE2 CZ sing Y N 462 TYR CE2 HE2 sing N N 463 TYR CZ OH sing N N 464 TYR OH HH sing N N 465 TYR OXT HXT sing N N 466 VAL N CA sing N N 467 VAL N H sing N N 468 VAL N H2 sing N N 469 VAL CA C sing N N 470 VAL CA CB sing N N 471 VAL CA HA sing N N 472 VAL C O doub N N 473 VAL C OXT sing N N 474 VAL CB CG1 sing N N 475 VAL CB CG2 sing N N 476 VAL CB HB sing N N 477 VAL CG1 HG11 sing N N 478 VAL CG1 HG12 sing N N 479 VAL CG1 HG13 sing N N 480 VAL CG2 HG21 sing N N 481 VAL CG2 HG22 sing N N 482 VAL CG2 HG23 sing N N 483 VAL OXT HXT sing N N 484 # _atom_sites.entry_id 6FIV _atom_sites.fract_transf_matrix[1][1] 0.019700 _atom_sites.fract_transf_matrix[1][2] 0.011374 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022748 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013631 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_