HEADER TRANSFERASE 04-FEB-18 6FNH TITLE CRYSTAL STRUCTURE OF EPHRIN A2 (EPHA2) RECEPTOR PROTEIN KINASE WITH A TITLE 2 PYRAZOLO[3,4-D]PYRIMIDINE FRAGMENT OF NVP-BHG712 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPHRIN TYPE-A RECEPTOR 2; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: EPITHELIAL CELL KINASE,TYROSINE-PROTEIN KINASE RECEPTOR ECK; COMPND 5 EC: 2.7.10.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EPHA2, ECK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INHIBITOR, COMPLEX, PROTEIN TYROSINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.KUDLINZKI,A.TROESTER,K.WITT,V.L.LINHARD,S.L.GANDE,K.SAXENA, AUTHOR 2 H.SCHWALBE REVDAT 3 17-JAN-24 6FNH 1 REMARK REVDAT 2 29-AUG-18 6FNH 1 JRNL REVDAT 1 08-AUG-18 6FNH 0 JRNL AUTH A.TROSTER,S.HEINZLMEIR,B.T.BERGER,S.L.GANDE,K.SAXENA, JRNL AUTH 2 S.SREERAMULU,V.LINHARD,A.H.NASIRI,M.BOLTE,S.MULLER,B.KUSTER, JRNL AUTH 3 G.MEDARD,D.KUDLINZKI,H.SCHWALBE JRNL TITL NVP-BHG712: EFFECTS OF REGIOISOMERS ON THE AFFINITY AND JRNL TITL 2 SELECTIVITY TOWARD THE EPHRIN FAMILY. JRNL REF CHEMMEDCHEM V. 13 1629 2018 JRNL REFN ESSN 1860-7187 JRNL PMID 29928781 JRNL DOI 10.1002/CMDC.201800398 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 210857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2216 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9816 - 3.4736 1.00 13754 147 0.1603 0.1715 REMARK 3 2 3.4736 - 2.7571 1.00 13328 141 0.1857 0.2221 REMARK 3 3 2.7571 - 2.4086 1.00 13209 140 0.2011 0.2270 REMARK 3 4 2.4086 - 2.1884 1.00 13149 140 0.1974 0.1994 REMARK 3 5 2.1884 - 2.0316 1.00 13134 139 0.2002 0.2337 REMARK 3 6 2.0316 - 1.9118 1.00 13088 139 0.2084 0.2349 REMARK 3 7 1.9118 - 1.8160 1.00 13020 139 0.2216 0.2548 REMARK 3 8 1.8160 - 1.7370 1.00 13100 139 0.2721 0.3028 REMARK 3 9 1.7370 - 1.6701 1.00 12954 137 0.2984 0.3311 REMARK 3 10 1.6701 - 1.6125 1.00 13021 139 0.3326 0.3223 REMARK 3 11 1.6125 - 1.5620 1.00 13018 138 0.3802 0.3632 REMARK 3 12 1.5620 - 1.5174 1.00 12993 138 0.4355 0.4193 REMARK 3 13 1.5174 - 1.4774 1.00 13003 138 0.5029 0.4850 REMARK 3 14 1.4774 - 1.4414 1.00 12957 137 0.5558 0.5032 REMARK 3 15 1.4414 - 1.4086 0.99 12844 137 0.5814 0.5618 REMARK 3 16 1.4086 - 1.3786 0.93 12069 128 0.6004 0.6150 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6862 REMARK 3 ANGLE : 0.958 9226 REMARK 3 CHIRALITY : 0.085 994 REMARK 3 PLANARITY : 0.007 1161 REMARK 3 DIHEDRAL : 18.497 4132 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FNH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03318 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS XDSAPP 2.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 212089 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.379 REMARK 200 RESOLUTION RANGE LOW (A) : 49.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.03 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.67 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5I9U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37.5 % MPD/PEG1000/PEG3350 (MD), 0.075 REMARK 280 M CARBOXYLIC ACIDS MIX (MD), 0.1 M BUFFER SYSTEM 3 (MD) PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.25000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.15800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.33700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 100.15800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.25000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.33700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 595 REMARK 465 ASP A 596 REMARK 465 PRO A 597 REMARK 465 ASN A 598 REMARK 465 GLN A 599 REMARK 465 ALA A 600 REMARK 465 VAL A 601 REMARK 465 SER A 636 REMARK 465 ASP A 767 REMARK 465 PRO A 768 REMARK 465 GLU A 769 REMARK 465 ALA A 770 REMARK 465 THR A 771 REMARK 465 TYR A 772 REMARK 465 THR A 773 REMARK 465 THR A 774 REMARK 465 SER A 775 REMARK 465 GLY A 776 REMARK 465 ARG A 890 REMARK 465 VAL A 891 REMARK 465 SER A 892 REMARK 465 ILE A 893 REMARK 465 ARG A 894 REMARK 465 LEU A 895 REMARK 465 PRO A 896 REMARK 465 SER A 897 REMARK 465 THR A 898 REMARK 465 SER A 899 REMARK 465 GLY A 900 REMARK 465 GLY B 595 REMARK 465 ASP B 596 REMARK 465 PRO B 597 REMARK 465 ASN B 598 REMARK 465 GLN B 599 REMARK 465 ALA B 600 REMARK 465 VAL B 601 REMARK 465 SER B 636 REMARK 465 GLY B 637 REMARK 465 LYS B 638 REMARK 465 THR B 771 REMARK 465 TYR B 772 REMARK 465 THR B 773 REMARK 465 THR B 774 REMARK 465 SER B 775 REMARK 465 GLY B 776 REMARK 465 GLY B 777 REMARK 465 THR B 883 REMARK 465 LEU B 884 REMARK 465 ALA B 885 REMARK 465 ASP B 886 REMARK 465 PHE B 887 REMARK 465 ASP B 888 REMARK 465 PRO B 889 REMARK 465 ARG B 890 REMARK 465 VAL B 891 REMARK 465 SER B 892 REMARK 465 ILE B 893 REMARK 465 ARG B 894 REMARK 465 LEU B 895 REMARK 465 PRO B 896 REMARK 465 SER B 897 REMARK 465 THR B 898 REMARK 465 SER B 899 REMARK 465 GLY B 900 REMARK 465 GLY C 595 REMARK 465 ASP C 596 REMARK 465 PRO C 597 REMARK 465 ASN C 598 REMARK 465 GLN C 599 REMARK 465 SER C 635 REMARK 465 SER C 636 REMARK 465 SER C 761 REMARK 465 ARG C 762 REMARK 465 VAL C 763 REMARK 465 LEU C 764 REMARK 465 GLU C 765 REMARK 465 ASP C 766 REMARK 465 ASP C 767 REMARK 465 PRO C 768 REMARK 465 GLU C 769 REMARK 465 ALA C 770 REMARK 465 THR C 771 REMARK 465 TYR C 772 REMARK 465 THR C 773 REMARK 465 THR C 774 REMARK 465 SER C 775 REMARK 465 GLY C 776 REMARK 465 GLY C 777 REMARK 465 LYS C 778 REMARK 465 ILE C 779 REMARK 465 VAL C 891 REMARK 465 SER C 892 REMARK 465 ILE C 893 REMARK 465 ARG C 894 REMARK 465 LEU C 895 REMARK 465 PRO C 896 REMARK 465 SER C 897 REMARK 465 THR C 898 REMARK 465 SER C 899 REMARK 465 GLY C 900 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 738 -13.05 77.94 REMARK 500 TRP A 819 -130.43 47.72 REMARK 500 ALA A 877 66.44 -119.18 REMARK 500 ALA A 877 66.44 -118.05 REMARK 500 THR B 634 -144.69 -117.38 REMARK 500 ARG B 738 -12.42 76.45 REMARK 500 ASP B 739 42.35 -141.70 REMARK 500 TRP B 819 -132.91 56.75 REMARK 500 LYS C 638 24.17 -154.47 REMARK 500 ARG C 738 -10.70 75.35 REMARK 500 ASP C 757 77.28 54.47 REMARK 500 TRP C 819 -132.22 45.44 REMARK 500 LEU C 821 136.44 -31.97 REMARK 500 ALA C 877 66.65 -118.92 REMARK 500 PRO C 889 72.04 -69.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DXK A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DXK B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DXK C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1003 DBREF 6FNH A 596 900 UNP P29317 EPHA2_HUMAN 596 900 DBREF 6FNH B 596 900 UNP P29317 EPHA2_HUMAN 596 900 DBREF 6FNH C 596 900 UNP P29317 EPHA2_HUMAN 596 900 SEQADV 6FNH GLY A 595 UNP P29317 EXPRESSION TAG SEQADV 6FNH GLY B 595 UNP P29317 EXPRESSION TAG SEQADV 6FNH GLY C 595 UNP P29317 EXPRESSION TAG SEQRES 1 A 306 GLY ASP PRO ASN GLN ALA VAL LEU LYS PHE THR THR GLU SEQRES 2 A 306 ILE HIS PRO SER CYS VAL THR ARG GLN LYS VAL ILE GLY SEQRES 3 A 306 ALA GLY GLU PHE GLY GLU VAL TYR LYS GLY MET LEU LYS SEQRES 4 A 306 THR SER SER GLY LYS LYS GLU VAL PRO VAL ALA ILE LYS SEQRES 5 A 306 THR LEU LYS ALA GLY TYR THR GLU LYS GLN ARG VAL ASP SEQRES 6 A 306 PHE LEU GLY GLU ALA GLY ILE MET GLY GLN PHE SER HIS SEQRES 7 A 306 HIS ASN ILE ILE ARG LEU GLU GLY VAL ILE SER LYS TYR SEQRES 8 A 306 LYS PRO MET MET ILE ILE THR GLU TYR MET GLU ASN GLY SEQRES 9 A 306 ALA LEU ASP LYS PHE LEU ARG GLU LYS ASP GLY GLU PHE SEQRES 10 A 306 SER VAL LEU GLN LEU VAL GLY MET LEU ARG GLY ILE ALA SEQRES 11 A 306 ALA GLY MET LYS TYR LEU ALA ASN MET ASN TYR VAL HIS SEQRES 12 A 306 ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL ASN SER ASN SEQRES 13 A 306 LEU VAL CYS LYS VAL SER ASP PHE GLY LEU SER ARG VAL SEQRES 14 A 306 LEU GLU ASP ASP PRO GLU ALA THR TYR THR THR SER GLY SEQRES 15 A 306 GLY LYS ILE PRO ILE ARG TRP THR ALA PRO GLU ALA ILE SEQRES 16 A 306 SER TYR ARG LYS PHE THR SER ALA SER ASP VAL TRP SER SEQRES 17 A 306 PHE GLY ILE VAL MET TRP GLU VAL MET THR TYR GLY GLU SEQRES 18 A 306 ARG PRO TYR TRP GLU LEU SER ASN HIS GLU VAL MET LYS SEQRES 19 A 306 ALA ILE ASN ASP GLY PHE ARG LEU PRO THR PRO MET ASP SEQRES 20 A 306 CYS PRO SER ALA ILE TYR GLN LEU MET MET GLN CYS TRP SEQRES 21 A 306 GLN GLN GLU ARG ALA ARG ARG PRO LYS PHE ALA ASP ILE SEQRES 22 A 306 VAL SER ILE LEU ASP LYS LEU ILE ARG ALA PRO ASP SER SEQRES 23 A 306 LEU LYS THR LEU ALA ASP PHE ASP PRO ARG VAL SER ILE SEQRES 24 A 306 ARG LEU PRO SER THR SER GLY SEQRES 1 B 306 GLY ASP PRO ASN GLN ALA VAL LEU LYS PHE THR THR GLU SEQRES 2 B 306 ILE HIS PRO SER CYS VAL THR ARG GLN LYS VAL ILE GLY SEQRES 3 B 306 ALA GLY GLU PHE GLY GLU VAL TYR LYS GLY MET LEU LYS SEQRES 4 B 306 THR SER SER GLY LYS LYS GLU VAL PRO VAL ALA ILE LYS SEQRES 5 B 306 THR LEU LYS ALA GLY TYR THR GLU LYS GLN ARG VAL ASP SEQRES 6 B 306 PHE LEU GLY GLU ALA GLY ILE MET GLY GLN PHE SER HIS SEQRES 7 B 306 HIS ASN ILE ILE ARG LEU GLU GLY VAL ILE SER LYS TYR SEQRES 8 B 306 LYS PRO MET MET ILE ILE THR GLU TYR MET GLU ASN GLY SEQRES 9 B 306 ALA LEU ASP LYS PHE LEU ARG GLU LYS ASP GLY GLU PHE SEQRES 10 B 306 SER VAL LEU GLN LEU VAL GLY MET LEU ARG GLY ILE ALA SEQRES 11 B 306 ALA GLY MET LYS TYR LEU ALA ASN MET ASN TYR VAL HIS SEQRES 12 B 306 ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL ASN SER ASN SEQRES 13 B 306 LEU VAL CYS LYS VAL SER ASP PHE GLY LEU SER ARG VAL SEQRES 14 B 306 LEU GLU ASP ASP PRO GLU ALA THR TYR THR THR SER GLY SEQRES 15 B 306 GLY LYS ILE PRO ILE ARG TRP THR ALA PRO GLU ALA ILE SEQRES 16 B 306 SER TYR ARG LYS PHE THR SER ALA SER ASP VAL TRP SER SEQRES 17 B 306 PHE GLY ILE VAL MET TRP GLU VAL MET THR TYR GLY GLU SEQRES 18 B 306 ARG PRO TYR TRP GLU LEU SER ASN HIS GLU VAL MET LYS SEQRES 19 B 306 ALA ILE ASN ASP GLY PHE ARG LEU PRO THR PRO MET ASP SEQRES 20 B 306 CYS PRO SER ALA ILE TYR GLN LEU MET MET GLN CYS TRP SEQRES 21 B 306 GLN GLN GLU ARG ALA ARG ARG PRO LYS PHE ALA ASP ILE SEQRES 22 B 306 VAL SER ILE LEU ASP LYS LEU ILE ARG ALA PRO ASP SER SEQRES 23 B 306 LEU LYS THR LEU ALA ASP PHE ASP PRO ARG VAL SER ILE SEQRES 24 B 306 ARG LEU PRO SER THR SER GLY SEQRES 1 C 306 GLY ASP PRO ASN GLN ALA VAL LEU LYS PHE THR THR GLU SEQRES 2 C 306 ILE HIS PRO SER CYS VAL THR ARG GLN LYS VAL ILE GLY SEQRES 3 C 306 ALA GLY GLU PHE GLY GLU VAL TYR LYS GLY MET LEU LYS SEQRES 4 C 306 THR SER SER GLY LYS LYS GLU VAL PRO VAL ALA ILE LYS SEQRES 5 C 306 THR LEU LYS ALA GLY TYR THR GLU LYS GLN ARG VAL ASP SEQRES 6 C 306 PHE LEU GLY GLU ALA GLY ILE MET GLY GLN PHE SER HIS SEQRES 7 C 306 HIS ASN ILE ILE ARG LEU GLU GLY VAL ILE SER LYS TYR SEQRES 8 C 306 LYS PRO MET MET ILE ILE THR GLU TYR MET GLU ASN GLY SEQRES 9 C 306 ALA LEU ASP LYS PHE LEU ARG GLU LYS ASP GLY GLU PHE SEQRES 10 C 306 SER VAL LEU GLN LEU VAL GLY MET LEU ARG GLY ILE ALA SEQRES 11 C 306 ALA GLY MET LYS TYR LEU ALA ASN MET ASN TYR VAL HIS SEQRES 12 C 306 ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL ASN SER ASN SEQRES 13 C 306 LEU VAL CYS LYS VAL SER ASP PHE GLY LEU SER ARG VAL SEQRES 14 C 306 LEU GLU ASP ASP PRO GLU ALA THR TYR THR THR SER GLY SEQRES 15 C 306 GLY LYS ILE PRO ILE ARG TRP THR ALA PRO GLU ALA ILE SEQRES 16 C 306 SER TYR ARG LYS PHE THR SER ALA SER ASP VAL TRP SER SEQRES 17 C 306 PHE GLY ILE VAL MET TRP GLU VAL MET THR TYR GLY GLU SEQRES 18 C 306 ARG PRO TYR TRP GLU LEU SER ASN HIS GLU VAL MET LYS SEQRES 19 C 306 ALA ILE ASN ASP GLY PHE ARG LEU PRO THR PRO MET ASP SEQRES 20 C 306 CYS PRO SER ALA ILE TYR GLN LEU MET MET GLN CYS TRP SEQRES 21 C 306 GLN GLN GLU ARG ALA ARG ARG PRO LYS PHE ALA ASP ILE SEQRES 22 C 306 VAL SER ILE LEU ASP LYS LEU ILE ARG ALA PRO ASP SER SEQRES 23 C 306 LEU LYS THR LEU ALA ASP PHE ASP PRO ARG VAL SER ILE SEQRES 24 C 306 ARG LEU PRO SER THR SER GLY HET DXK A1001 17 HET EDO A1002 4 HET EDO A1003 4 HET EDO A1004 4 HET EDO A1005 4 HET EDO A1006 4 HET EDO A1007 4 HET EDO A1008 4 HET EDO A1009 4 HET EDO A1010 4 HET EDO A1011 4 HET EDO A1012 4 HET DXK B1001 17 HET EDO B1002 4 HET EDO B1003 4 HET EDO B1004 4 HET EDO B1005 4 HET DXK C1001 17 HET EDO C1002 4 HET EDO C1003 4 HETNAM DXK 1-METHYL-6-PYRIDIN-3-YL-PYRAZOLO[3,4-D]PYRIMIDIN-4- HETNAM 2 DXK AMINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 DXK 3(C11 H10 N6) FORMUL 5 EDO 17(C2 H6 O2) FORMUL 24 HOH *646(H2 O) HELIX 1 AA1 HIS A 609 SER A 611 5 3 HELIX 2 AA2 THR A 653 GLY A 668 1 16 HELIX 3 AA3 LEU A 700 LYS A 707 1 8 HELIX 4 AA4 SER A 712 MET A 733 1 22 HELIX 5 AA5 ALA A 741 ARG A 743 5 3 HELIX 6 AA6 PRO A 780 THR A 784 5 5 HELIX 7 AA7 ALA A 785 ARG A 792 1 8 HELIX 8 AA8 THR A 795 THR A 812 1 18 HELIX 9 AA9 SER A 822 ASP A 832 1 11 HELIX 10 AB1 PRO A 843 TRP A 854 1 12 HELIX 11 AB2 GLU A 857 ARG A 861 5 5 HELIX 12 AB3 LYS A 863 ALA A 877 1 15 HELIX 13 AB4 PRO A 878 LYS A 882 5 5 HELIX 14 AB5 THR A 883 PHE A 887 5 5 HELIX 15 AB6 HIS B 609 SER B 611 5 3 HELIX 16 AB7 THR B 653 GLN B 669 1 17 HELIX 17 AB8 LEU B 700 LYS B 707 1 8 HELIX 18 AB9 SER B 712 MET B 733 1 22 HELIX 19 AC1 ALA B 741 ARG B 743 5 3 HELIX 20 AC2 PHE B 758 ASP B 767 1 10 HELIX 21 AC3 ALA B 785 ARG B 792 1 8 HELIX 22 AC4 THR B 795 THR B 812 1 18 HELIX 23 AC5 SER B 822 ASP B 832 1 11 HELIX 24 AC6 PRO B 843 TRP B 854 1 12 HELIX 25 AC7 GLU B 857 ARG B 861 5 5 HELIX 26 AC8 LYS B 863 ALA B 877 1 15 HELIX 27 AC9 PRO B 878 LYS B 882 5 5 HELIX 28 AD1 HIS C 609 SER C 611 5 3 HELIX 29 AD2 THR C 653 GLY C 668 1 16 HELIX 30 AD3 LEU C 700 LYS C 707 1 8 HELIX 31 AD4 SER C 712 MET C 733 1 22 HELIX 32 AD5 ALA C 741 ARG C 743 5 3 HELIX 33 AD6 PRO C 780 THR C 784 5 5 HELIX 34 AD7 ALA C 785 ARG C 792 1 8 HELIX 35 AD8 THR C 795 THR C 812 1 18 HELIX 36 AD9 SER C 822 ASP C 832 1 11 HELIX 37 AE1 PRO C 843 TRP C 854 1 12 HELIX 38 AE2 GLU C 857 ARG C 861 5 5 HELIX 39 AE3 LYS C 863 ALA C 877 1 15 HELIX 40 AE4 PRO C 878 LYS C 882 5 5 HELIX 41 AE5 THR C 883 PHE C 887 5 5 SHEET 1 AA1 5 VAL A 613 ALA A 621 0 SHEET 2 AA1 5 GLU A 626 LEU A 632 -1 O VAL A 627 N ILE A 619 SHEET 3 AA1 5 VAL A 641 THR A 647 -1 O ILE A 645 N TYR A 628 SHEET 4 AA1 5 MET A 689 GLU A 693 -1 O ILE A 690 N LYS A 646 SHEET 5 AA1 5 LEU A 678 ILE A 682 -1 N GLY A 680 O ILE A 691 SHEET 1 AA2 3 GLY A 698 ALA A 699 0 SHEET 2 AA2 3 ILE A 745 VAL A 747 -1 O VAL A 747 N GLY A 698 SHEET 3 AA2 3 CYS A 753 VAL A 755 -1 O LYS A 754 N LEU A 746 SHEET 1 AA3 2 VAL A 763 LEU A 764 0 SHEET 2 AA3 2 LYS A 778 ILE A 779 1 O ILE A 779 N VAL A 763 SHEET 1 AA4 6 THR B 606 GLU B 607 0 SHEET 2 AA4 6 LEU B 678 ILE B 682 1 O VAL B 681 N THR B 606 SHEET 3 AA4 6 MET B 689 GLU B 693 -1 O ILE B 691 N GLY B 680 SHEET 4 AA4 6 VAL B 641 THR B 647 -1 N LYS B 646 O ILE B 690 SHEET 5 AA4 6 GLU B 626 LEU B 632 -1 N TYR B 628 O ILE B 645 SHEET 6 AA4 6 VAL B 613 ALA B 621 -1 N GLY B 620 O VAL B 627 SHEET 1 AA5 3 GLY B 698 ALA B 699 0 SHEET 2 AA5 3 ILE B 745 VAL B 747 -1 O VAL B 747 N GLY B 698 SHEET 3 AA5 3 CYS B 753 VAL B 755 -1 O LYS B 754 N LEU B 746 SHEET 1 AA6 5 VAL C 613 ALA C 621 0 SHEET 2 AA6 5 GLU C 626 THR C 634 -1 O VAL C 627 N ILE C 619 SHEET 3 AA6 5 LYS C 639 THR C 647 -1 O ILE C 645 N TYR C 628 SHEET 4 AA6 5 MET C 689 GLU C 693 -1 O ILE C 690 N LYS C 646 SHEET 5 AA6 5 LEU C 678 ILE C 682 -1 N GLU C 679 O ILE C 691 SHEET 1 AA7 3 GLY C 698 ALA C 699 0 SHEET 2 AA7 3 ILE C 745 VAL C 747 -1 O VAL C 747 N GLY C 698 SHEET 3 AA7 3 CYS C 753 VAL C 755 -1 O LYS C 754 N LEU C 746 CISPEP 1 LYS A 686 PRO A 687 0 1.23 CISPEP 2 LYS B 686 PRO B 687 0 -2.09 CISPEP 3 LYS C 686 PRO C 687 0 29.86 SITE 1 AC1 10 ILE A 619 ALA A 621 ALA A 644 THR A 692 SITE 2 AC1 10 GLU A 693 MET A 695 LEU A 746 EDO A1006 SITE 3 AC1 10 HOH A1212 HOH A1274 SITE 1 AC2 3 GLN A 852 ARG A 860 PRO A 862 SITE 1 AC3 2 GLN A 669 HOH A1109 SITE 1 AC4 4 TYR A 735 VAL A 736 HIS A 737 HOH A1215 SITE 1 AC5 6 TYR A 791 LYS A 793 HOH A1158 HOH A1208 SITE 2 AC5 6 ASP C 708 EDO C1003 SITE 1 AC6 4 ARG A 743 ASN A 744 ASP A 757 DXK A1001 SITE 1 AC7 2 ASP A 888 EDO C1002 SITE 1 AC8 1 GLN A 669 SITE 1 AC9 4 THR A 795 ARG A 858 HOH A1180 GLU C 706 SITE 1 AD1 4 LEU A 714 GLY A 718 HOH A1166 HOH A1173 SITE 1 AD2 4 ASP A 708 THR A 812 GLU A 815 HOH A1138 SITE 1 AD3 6 ASN A 750 HOH A1225 HOH A1335 GLN B 616 SITE 2 AD3 6 LYS B 617 TYR B 628 SITE 1 AD4 9 ILE B 619 ALA B 621 ALA B 644 THR B 692 SITE 2 AD4 9 GLU B 693 MET B 695 LEU B 746 HOH B1189 SITE 3 AD4 9 HOH B1250 SITE 1 AD5 1 ASN B 750 SITE 1 AD6 2 ALA B 770 ILE B 779 SITE 1 AD7 5 HOH A1202 LYS B 684 TYR B 685 EDO B1005 SITE 2 AD7 5 HOH B1111 SITE 1 AD8 3 TYR B 685 EDO B1004 HOH B1229 SITE 1 AD9 8 ALA C 621 GLY C 622 ALA C 644 THR C 692 SITE 2 AD9 8 GLU C 693 MET C 695 LEU C 746 HOH C1134 SITE 1 AE1 5 ASP A 888 EDO A1007 GLN C 852 ARG C 860 SITE 2 AE1 5 PRO C 862 SITE 1 AE2 3 EDO A1005 ASP C 708 GLY C 709 CRYST1 56.500 90.674 200.316 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017699 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004992 0.00000