HEADER TRANSFERASE 05-FEB-18 6FNT TITLE ERGOTHIONEINE-BIOSYNTHETIC METHYLTRANSFERASE EGTD IN COMPLEX WITH TITLE 2 PYRROLIDINOHISTIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE N-ALPHA-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EGTD; COMPND 5 SYNONYM: HISTIDINE TRIMETHYLTRANSFERASE; COMPND 6 EC: 2.1.1.44; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 3 ORGANISM_TAXID: 1772; SOURCE 4 GENE: EGTD, ERS451418_06055; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET19M KEYWDS ERGOTHIONEINE, METHYLTRANSFERASE, INHIBITOR COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.VIT,W.BLANKENFELDT,F.P.SEEBECK REVDAT 2 17-JAN-24 6FNT 1 REMARK REVDAT 1 13-JUN-18 6FNT 0 JRNL AUTH L.MISSON,R.BURN,A.VIT,J.HILDESHEIM,M.A.BELIAEVA, JRNL AUTH 2 W.BLANKENFELDT,F.P.SEEBECK JRNL TITL INHIBITION AND REGULATION OF THE ERGOTHIONEINE BIOSYNTHETIC JRNL TITL 2 METHYLTRANSFERASE EGTD. JRNL REF ACS CHEM. BIOL. V. 13 1333 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 29658702 JRNL DOI 10.1021/ACSCHEMBIO.8B00127 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 61858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9919 - 5.3205 1.00 2878 158 0.1592 0.1956 REMARK 3 2 5.3205 - 4.2243 1.00 2744 133 0.1274 0.1422 REMARK 3 3 4.2243 - 3.6907 1.00 2711 154 0.1396 0.1915 REMARK 3 4 3.6907 - 3.3534 1.00 2726 128 0.1530 0.2157 REMARK 3 5 3.3534 - 3.1131 1.00 2675 134 0.1765 0.1894 REMARK 3 6 3.1131 - 2.9296 1.00 2692 145 0.1949 0.2290 REMARK 3 7 2.9296 - 2.7829 1.00 2655 147 0.1936 0.2215 REMARK 3 8 2.7829 - 2.6618 1.00 2679 143 0.1933 0.2379 REMARK 3 9 2.6618 - 2.5594 1.00 2640 159 0.1813 0.2286 REMARK 3 10 2.5594 - 2.4711 1.00 2664 141 0.1797 0.2015 REMARK 3 11 2.4711 - 2.3938 1.00 2633 143 0.1779 0.1938 REMARK 3 12 2.3938 - 2.3254 1.00 2654 149 0.1757 0.2130 REMARK 3 13 2.3254 - 2.2642 1.00 2640 153 0.1729 0.2295 REMARK 3 14 2.2642 - 2.2089 1.00 2654 122 0.1771 0.2377 REMARK 3 15 2.2089 - 2.1587 1.00 2626 134 0.1862 0.2108 REMARK 3 16 2.1587 - 2.1128 1.00 2630 169 0.1883 0.2290 REMARK 3 17 2.1128 - 2.0705 1.00 2676 125 0.1900 0.2092 REMARK 3 18 2.0705 - 2.0314 1.00 2630 137 0.2092 0.2644 REMARK 3 19 2.0314 - 1.9952 1.00 2609 139 0.2219 0.2767 REMARK 3 20 1.9952 - 1.9613 1.00 2640 142 0.2460 0.2937 REMARK 3 21 1.9613 - 1.9297 1.00 2641 134 0.2609 0.3120 REMARK 3 22 1.9297 - 1.9000 1.00 2654 118 0.2890 0.3703 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5080 REMARK 3 ANGLE : 0.876 6917 REMARK 3 CHIRALITY : 0.033 797 REMARK 3 PLANARITY : 0.004 909 REMARK 3 DIHEDRAL : 13.134 1830 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2613 19.6210 34.6097 REMARK 3 T TENSOR REMARK 3 T11: 0.2581 T22: 0.4232 REMARK 3 T33: 0.2841 T12: -0.0011 REMARK 3 T13: -0.0174 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.2406 L22: 2.7938 REMARK 3 L33: 1.0114 L12: 2.3991 REMARK 3 L13: -0.0765 L23: 0.1710 REMARK 3 S TENSOR REMARK 3 S11: 0.2423 S12: -0.3321 S13: -0.0562 REMARK 3 S21: 0.2722 S22: -0.1884 S23: 0.0205 REMARK 3 S31: -0.0680 S32: 0.1085 S33: 0.0513 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3968 16.9658 13.5208 REMARK 3 T TENSOR REMARK 3 T11: 0.2239 T22: 0.3099 REMARK 3 T33: 0.2500 T12: 0.0128 REMARK 3 T13: -0.0269 T23: 0.0507 REMARK 3 L TENSOR REMARK 3 L11: 0.7904 L22: 1.0253 REMARK 3 L33: 0.6874 L12: 0.5528 REMARK 3 L13: -0.2261 L23: -0.2744 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: 0.0223 S13: -0.0472 REMARK 3 S21: -0.1225 S22: -0.1122 S23: -0.0191 REMARK 3 S31: 0.0171 S32: 0.0001 S33: 0.0200 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0610 28.7921 15.3557 REMARK 3 T TENSOR REMARK 3 T11: 0.3798 T22: 0.3855 REMARK 3 T33: 0.2683 T12: 0.0132 REMARK 3 T13: -0.0246 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 3.2004 L22: 0.8079 REMARK 3 L33: 3.5161 L12: -0.7243 REMARK 3 L13: -1.6627 L23: 1.1565 REMARK 3 S TENSOR REMARK 3 S11: -0.0754 S12: -0.1058 S13: -0.2862 REMARK 3 S21: 0.1177 S22: -0.0226 S23: -0.0569 REMARK 3 S31: 0.2801 S32: 0.5952 S33: 0.1298 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6182 30.8051 20.6350 REMARK 3 T TENSOR REMARK 3 T11: 0.2895 T22: 0.3024 REMARK 3 T33: 0.2104 T12: -0.0005 REMARK 3 T13: -0.0040 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 1.3763 L22: 1.0915 REMARK 3 L33: 1.8051 L12: 0.4815 REMARK 3 L13: 0.9322 L23: 0.5314 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: 0.0732 S13: 0.0785 REMARK 3 S21: 0.1396 S22: 0.0372 S23: -0.0350 REMARK 3 S31: -0.1185 S32: 0.0227 S33: -0.1402 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6096 13.9591 16.0534 REMARK 3 T TENSOR REMARK 3 T11: 0.2334 T22: 0.3410 REMARK 3 T33: 0.2498 T12: -0.0015 REMARK 3 T13: -0.0350 T23: 0.0478 REMARK 3 L TENSOR REMARK 3 L11: 0.5366 L22: 1.2797 REMARK 3 L33: 0.7646 L12: 0.2572 REMARK 3 L13: -0.1630 L23: -0.5580 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: -0.0113 S13: -0.0329 REMARK 3 S21: -0.0860 S22: 0.0796 S23: 0.1786 REMARK 3 S31: 0.0002 S32: -0.2153 S33: -0.0792 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4769 -3.3992 14.9634 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.2265 REMARK 3 T33: 0.2789 T12: -0.0211 REMARK 3 T13: -0.0313 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.8633 L22: 0.6675 REMARK 3 L33: 1.0460 L12: 0.1388 REMARK 3 L13: 0.0129 L23: -0.0190 REMARK 3 S TENSOR REMARK 3 S11: -0.0754 S12: 0.0896 S13: -0.1095 REMARK 3 S21: -0.1406 S22: 0.0767 S23: 0.0969 REMARK 3 S31: 0.0747 S32: -0.0755 S33: -0.0008 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.3538 4.0091 13.5024 REMARK 3 T TENSOR REMARK 3 T11: 0.2763 T22: 0.3296 REMARK 3 T33: 0.2607 T12: -0.0102 REMARK 3 T13: -0.0019 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 1.3111 L22: 1.3269 REMARK 3 L33: 1.9550 L12: -0.2623 REMARK 3 L13: 0.4336 L23: -0.5141 REMARK 3 S TENSOR REMARK 3 S11: -0.1164 S12: 0.0479 S13: 0.1031 REMARK 3 S21: -0.0031 S22: 0.1171 S23: 0.0225 REMARK 3 S31: -0.0730 S32: -0.1244 S33: 0.0218 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 155 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5778 -11.6100 20.2016 REMARK 3 T TENSOR REMARK 3 T11: 0.3321 T22: 0.2588 REMARK 3 T33: 0.3531 T12: -0.0296 REMARK 3 T13: -0.0439 T23: 0.0503 REMARK 3 L TENSOR REMARK 3 L11: 1.7488 L22: 0.3080 REMARK 3 L33: 0.9726 L12: -0.2558 REMARK 3 L13: 0.2074 L23: -0.1478 REMARK 3 S TENSOR REMARK 3 S11: 0.0617 S12: -0.0763 S13: -0.3717 REMARK 3 S21: -0.0440 S22: 0.0518 S23: 0.1216 REMARK 3 S31: 0.2991 S32: -0.1128 S33: -0.0941 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FOURIER SYNTHESIS REMARK 4 REMARK 4 6FNT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : KMC-1 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61947 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.80 REMARK 200 R MERGE FOR SHELL (I) : 1.38200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4PIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% (W/V) PEG 8000, 20% (V/V) REMARK 280 GLYCEROL, 0.16 M MG-ACETATE, 0.08 M NA-CACODYLATE, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.88400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.52250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.76750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.52250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.88400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.76750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 16 CD OE1 OE2 REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 ARG A 263 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 298 CD OE1 OE2 REMARK 470 SER B 87 OG REMARK 470 ARG B 107 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 141 CG OD1 OD2 REMARK 470 GLU B 143 CG CD OE1 OE2 REMARK 470 GLU B 144 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH12 ARG A 218 O HOH A 501 1.55 REMARK 500 O HOH A 501 O HOH B 501 1.98 REMARK 500 OD1 ASP B 235 O HOH B 501 2.17 REMARK 500 O LEU B 183 O HOH B 502 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 39 54.40 -98.58 REMARK 500 ASP A 207 64.99 -155.47 REMARK 500 TYR B 39 56.28 -99.83 REMARK 500 GLU B 144 -31.73 -132.47 REMARK 500 ASP B 207 68.94 -156.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AVO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AVO B 401 DBREF1 6FNT A 3 321 UNP A0A0D6J225_MYCSM DBREF2 6FNT A A0A0D6J225 3 321 DBREF1 6FNT B 3 321 UNP A0A0D6J225_MYCSM DBREF2 6FNT B A0A0D6J225 3 321 SEQADV 6FNT GLY A -1 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT HIS A 0 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT MET A 1 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT ALA A 2 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT GLY B -1 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT HIS B 0 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT MET B 1 UNP A0A0D6J22 EXPRESSION TAG SEQADV 6FNT ALA B 2 UNP A0A0D6J22 EXPRESSION TAG SEQRES 1 A 323 GLY HIS MET ALA LEU SER LEU ALA ASN TYR LEU ALA ALA SEQRES 2 A 323 ASP SER ALA ALA GLU ALA LEU ARG ARG ASP VAL ARG ALA SEQRES 3 A 323 GLY LEU THR ALA THR GLN LYS SER LEU PRO PRO LYS TRP SEQRES 4 A 323 PHE TYR ASP ALA VAL GLY SER ASP LEU PHE ASP GLN ILE SEQRES 5 A 323 THR ARG LEU PRO GLU TYR TYR PRO THR ARG THR GLU ALA SEQRES 6 A 323 GLN ILE LEU ARG THR ARG SER ALA GLU ILE ILE SER ALA SEQRES 7 A 323 ALA GLY ALA ASP THR LEU VAL GLU LEU GLY SER GLY THR SEQRES 8 A 323 SER GLU LYS THR ARG MET LEU LEU ASP ALA MET ARG ASP SEQRES 9 A 323 ALA GLU LEU LEU ARG ARG PHE ILE PRO PHE ASP VAL ASP SEQRES 10 A 323 ALA GLY VAL LEU ARG SER ALA GLY ALA ALA ILE GLY ALA SEQRES 11 A 323 GLU TYR PRO GLY ILE GLU ILE ASP ALA VAL CYS GLY ASP SEQRES 12 A 323 PHE GLU GLU HIS LEU GLY LYS ILE PRO HIS VAL GLY ARG SEQRES 13 A 323 ARG LEU VAL VAL PHE LEU GLY SER THR ILE GLY ASN LEU SEQRES 14 A 323 THR PRO ALA PRO ARG ALA GLU PHE LEU SER THR LEU ALA SEQRES 15 A 323 ASP THR LEU GLN PRO GLY ASP SER LEU LEU LEU GLY THR SEQRES 16 A 323 ASP LEU VAL LYS ASP THR GLY ARG LEU VAL ARG ALA TYR SEQRES 17 A 323 ASP ASP ALA ALA GLY VAL THR ALA ALA PHE ASN ARG ASN SEQRES 18 A 323 VAL LEU ALA VAL VAL ASN ARG GLU LEU SER ALA ASP PHE SEQRES 19 A 323 ASP LEU ASP ALA PHE GLU HIS VAL ALA LYS TRP ASN SER SEQRES 20 A 323 ASP GLU GLU ARG ILE GLU MET TRP LEU ARG ALA ARG THR SEQRES 21 A 323 ALA GLN HIS VAL ARG VAL ALA ALA LEU ASP LEU GLU VAL SEQRES 22 A 323 ASP PHE ALA ALA GLY GLU GLU MET LEU THR GLU VAL SER SEQRES 23 A 323 CYS LYS PHE ARG PRO GLU ASN VAL VAL ALA GLU LEU ALA SEQRES 24 A 323 GLU ALA GLY LEU ARG GLN THR HIS TRP TRP THR ASP PRO SEQRES 25 A 323 ALA GLY ASP PHE GLY LEU SER LEU ALA VAL ARG SEQRES 1 B 323 GLY HIS MET ALA LEU SER LEU ALA ASN TYR LEU ALA ALA SEQRES 2 B 323 ASP SER ALA ALA GLU ALA LEU ARG ARG ASP VAL ARG ALA SEQRES 3 B 323 GLY LEU THR ALA THR GLN LYS SER LEU PRO PRO LYS TRP SEQRES 4 B 323 PHE TYR ASP ALA VAL GLY SER ASP LEU PHE ASP GLN ILE SEQRES 5 B 323 THR ARG LEU PRO GLU TYR TYR PRO THR ARG THR GLU ALA SEQRES 6 B 323 GLN ILE LEU ARG THR ARG SER ALA GLU ILE ILE SER ALA SEQRES 7 B 323 ALA GLY ALA ASP THR LEU VAL GLU LEU GLY SER GLY THR SEQRES 8 B 323 SER GLU LYS THR ARG MET LEU LEU ASP ALA MET ARG ASP SEQRES 9 B 323 ALA GLU LEU LEU ARG ARG PHE ILE PRO PHE ASP VAL ASP SEQRES 10 B 323 ALA GLY VAL LEU ARG SER ALA GLY ALA ALA ILE GLY ALA SEQRES 11 B 323 GLU TYR PRO GLY ILE GLU ILE ASP ALA VAL CYS GLY ASP SEQRES 12 B 323 PHE GLU GLU HIS LEU GLY LYS ILE PRO HIS VAL GLY ARG SEQRES 13 B 323 ARG LEU VAL VAL PHE LEU GLY SER THR ILE GLY ASN LEU SEQRES 14 B 323 THR PRO ALA PRO ARG ALA GLU PHE LEU SER THR LEU ALA SEQRES 15 B 323 ASP THR LEU GLN PRO GLY ASP SER LEU LEU LEU GLY THR SEQRES 16 B 323 ASP LEU VAL LYS ASP THR GLY ARG LEU VAL ARG ALA TYR SEQRES 17 B 323 ASP ASP ALA ALA GLY VAL THR ALA ALA PHE ASN ARG ASN SEQRES 18 B 323 VAL LEU ALA VAL VAL ASN ARG GLU LEU SER ALA ASP PHE SEQRES 19 B 323 ASP LEU ASP ALA PHE GLU HIS VAL ALA LYS TRP ASN SER SEQRES 20 B 323 ASP GLU GLU ARG ILE GLU MET TRP LEU ARG ALA ARG THR SEQRES 21 B 323 ALA GLN HIS VAL ARG VAL ALA ALA LEU ASP LEU GLU VAL SEQRES 22 B 323 ASP PHE ALA ALA GLY GLU GLU MET LEU THR GLU VAL SER SEQRES 23 B 323 CYS LYS PHE ARG PRO GLU ASN VAL VAL ALA GLU LEU ALA SEQRES 24 B 323 GLU ALA GLY LEU ARG GLN THR HIS TRP TRP THR ASP PRO SEQRES 25 B 323 ALA GLY ASP PHE GLY LEU SER LEU ALA VAL ARG HET AVO A 401 30 HET AVO B 401 30 HETNAM AVO PYRROLIDINOHISTIDINE FORMUL 3 AVO 2(C10 H17 N3 O2 2+) FORMUL 5 HOH *309(H2 O) HELIX 1 AA1 ALA A 10 ALA A 28 1 19 HELIX 2 AA2 PRO A 34 TYR A 39 5 6 HELIX 3 AA3 ASP A 40 THR A 51 1 12 HELIX 4 AA4 TYR A 57 GLY A 78 1 22 HELIX 5 AA5 SER A 90 ALA A 103 1 14 HELIX 6 AA6 ASP A 115 TYR A 130 1 16 HELIX 7 AA7 HIS A 145 ILE A 149 5 5 HELIX 8 AA8 SER A 162 LEU A 167 5 6 HELIX 9 AA9 THR A 168 THR A 182 1 15 HELIX 10 AB1 ASP A 198 TYR A 206 1 9 HELIX 11 AB2 GLY A 211 LEU A 228 1 18 HELIX 12 AB3 ASP A 233 ASP A 235 5 3 HELIX 13 AB4 ALA A 265 ASP A 268 5 4 HELIX 14 AB5 ARG A 288 ALA A 299 1 12 HELIX 15 AB6 ASP B 12 ALA B 28 1 17 HELIX 16 AB7 PRO B 34 TYR B 39 5 6 HELIX 17 AB8 ASP B 40 THR B 51 1 12 HELIX 18 AB9 TYR B 57 GLY B 78 1 22 HELIX 19 AC1 SER B 90 ALA B 103 1 14 HELIX 20 AC2 ASP B 115 TYR B 130 1 16 HELIX 21 AC3 ASP B 141 LEU B 146 1 6 HELIX 22 AC4 GLY B 147 ILE B 149 5 3 HELIX 23 AC5 SER B 162 LEU B 167 5 6 HELIX 24 AC6 THR B 168 THR B 182 1 15 HELIX 25 AC7 ASP B 198 TYR B 206 1 9 HELIX 26 AC8 GLY B 211 SER B 229 1 19 HELIX 27 AC9 ASP B 233 ASP B 235 5 3 HELIX 28 AD1 ALA B 265 ASP B 268 5 4 HELIX 29 AD2 ARG B 288 ALA B 299 1 12 SHEET 1 AA1 8 SER A 4 ASN A 7 0 SHEET 2 AA1 8 GLU A 134 CYS A 139 1 O CYS A 139 N ALA A 6 SHEET 3 AA1 8 ARG A 108 PHE A 112 1 N PHE A 109 O GLU A 134 SHEET 4 AA1 8 THR A 81 LEU A 85 1 N LEU A 82 O ILE A 110 SHEET 5 AA1 8 ARG A 155 PHE A 159 1 O LEU A 156 N THR A 81 SHEET 6 AA1 8 SER A 188 ASP A 194 1 O LEU A 190 N VAL A 157 SHEET 7 AA1 8 PHE A 314 VAL A 320 -1 O GLY A 315 N THR A 193 SHEET 8 AA1 8 ARG A 302 THR A 308 -1 N ARG A 302 O VAL A 320 SHEET 1 AA2 3 PHE A 237 ASN A 244 0 SHEET 2 AA2 3 ARG A 249 ALA A 256 -1 O ARG A 255 N GLU A 238 SHEET 3 AA2 3 GLU A 278 CYS A 285 -1 O GLU A 282 N MET A 252 SHEET 1 AA3 2 GLN A 260 VAL A 264 0 SHEET 2 AA3 2 LEU A 269 PHE A 273 -1 O LEU A 269 N VAL A 264 SHEET 1 AA4 8 SER B 4 ASN B 7 0 SHEET 2 AA4 8 GLU B 134 CYS B 139 1 O CYS B 139 N ALA B 6 SHEET 3 AA4 8 ARG B 108 PHE B 112 1 N PRO B 111 O VAL B 138 SHEET 4 AA4 8 THR B 81 LEU B 85 1 N LEU B 82 O ILE B 110 SHEET 5 AA4 8 ARG B 155 PHE B 159 1 O LEU B 156 N THR B 81 SHEET 6 AA4 8 SER B 188 ASP B 194 1 O LEU B 190 N VAL B 157 SHEET 7 AA4 8 PHE B 314 VAL B 320 -1 O ALA B 319 N LEU B 189 SHEET 8 AA4 8 ARG B 302 THR B 308 -1 N THR B 304 O LEU B 318 SHEET 1 AA5 3 PHE B 237 ASN B 244 0 SHEET 2 AA5 3 ARG B 249 ALA B 256 -1 O ARG B 255 N GLU B 238 SHEET 3 AA5 3 GLU B 278 CYS B 285 -1 O SER B 284 N ILE B 250 SHEET 1 AA6 2 GLN B 260 VAL B 264 0 SHEET 2 AA6 2 LEU B 269 PHE B 273 -1 O VAL B 271 N VAL B 262 SITE 1 AC1 11 TYR A 39 PHE A 47 TYR A 56 GLY A 161 SITE 2 AC1 11 THR A 163 ASN A 166 TYR A 206 GLU A 282 SITE 3 AC1 11 SER A 284 HOH A 550 HOH A 554 SITE 1 AC2 11 TYR B 39 PHE B 47 TYR B 56 GLY B 161 SITE 2 AC2 11 THR B 163 ASN B 166 TYR B 206 GLU B 282 SITE 3 AC2 11 SER B 284 HOH B 516 HOH B 526 CRYST1 71.768 77.535 139.045 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013934 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012897 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007192 0.00000