HEADER HYDROLASE 16-FEB-18 6FRV TITLE STRUCTURE OF THE CATALYTIC DOMAIN OF ASPERGILLUS NIGER GLUCOAMYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOAMYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE,GLUCAN 1,4-ALPHA- COMPND 5 GLUCOSIDASE; COMPND 6 EC: 3.2.1.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIGER; SOURCE 3 ORGANISM_TAXID: 5061; SOURCE 4 GENE: GLAA; SOURCE 5 EXPRESSION_SYSTEM: ASPERGILLUS NIGER; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5061 KEYWDS GLYCOSYLATION, STARCH DEGRADATION, GLYCOSIDE HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.ROTH,O.V.MOROZ,A.ARIZA,E.P.FRIIS,G.J.DAVIES,K.S.WILSON REVDAT 3 17-JAN-24 6FRV 1 HETSYN REVDAT 2 29-JUL-20 6FRV 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 09-MAY-18 6FRV 0 JRNL AUTH C.ROTH,O.V.MOROZ,A.ARIZA,L.K.SKOV,K.AYABE,G.J.DAVIES, JRNL AUTH 2 K.S.WILSON JRNL TITL STRUCTURAL INSIGHT INTO INDUSTRIALLY RELEVANT GLUCOAMYLASES: JRNL TITL 2 FLEXIBLE POSITIONS OF STARCH-BINDING DOMAINS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 74 463 2018 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 29717717 JRNL DOI 10.1107/S2059798318004989 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 18436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.256 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.343 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 972 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1324 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.4060 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.5070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3542 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.22000 REMARK 3 B22 (A**2) : -8.09000 REMARK 3 B33 (A**2) : 3.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.567 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.357 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.862 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3702 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3142 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5073 ; 1.267 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7303 ; 3.984 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 6.381 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;37.944 ;24.601 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 510 ;15.544 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;14.228 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 576 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4198 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 785 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1867 ; 2.387 ; 5.798 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1866 ; 2.378 ; 5.795 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2332 ; 3.808 ; 8.686 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6FRV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19454 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1AGM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, HEPES, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.18450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.44000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.56250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.44000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.18450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.56250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 492 REMARK 465 ILE A 493 REMARK 465 VAL A 494 REMARK 465 ALA A 495 REMARK 465 THR A 496 REMARK 465 GLY A 497 REMARK 465 GLY A 498 REMARK 465 THR A 499 REMARK 465 THR A 500 REMARK 465 THR A 501 REMARK 465 THR A 502 REMARK 465 ALA A 503 REMARK 465 THR A 504 REMARK 465 PRO A 505 REMARK 465 THR A 506 REMARK 465 GLY A 507 REMARK 465 SER A 508 REMARK 465 GLY A 509 REMARK 465 SER A 510 REMARK 465 VAL A 511 REMARK 465 THR A 512 REMARK 465 SER A 513 REMARK 465 THR A 514 REMARK 465 SER A 515 REMARK 465 LYS A 516 REMARK 465 THR A 517 REMARK 465 THR A 518 REMARK 465 ALA A 519 REMARK 465 THR A 520 REMARK 465 ALA A 521 REMARK 465 SER A 522 REMARK 465 LYS A 523 REMARK 465 THR A 524 REMARK 465 SER A 525 REMARK 465 THR A 526 REMARK 465 SER A 527 REMARK 465 THR A 528 REMARK 465 SER A 529 REMARK 465 SER A 530 REMARK 465 THR A 531 REMARK 465 SER A 532 REMARK 465 CYS A 533 REMARK 465 THR A 534 REMARK 465 THR A 535 REMARK 465 PRO A 536 REMARK 465 THR A 537 REMARK 465 ALA A 538 REMARK 465 VAL A 539 REMARK 465 ALA A 540 REMARK 465 VAL A 541 REMARK 465 THR A 542 REMARK 465 PHE A 543 REMARK 465 ASP A 544 REMARK 465 LEU A 545 REMARK 465 THR A 546 REMARK 465 ALA A 547 REMARK 465 THR A 548 REMARK 465 THR A 549 REMARK 465 THR A 550 REMARK 465 TYR A 551 REMARK 465 GLY A 552 REMARK 465 GLU A 553 REMARK 465 ASN A 554 REMARK 465 ILE A 555 REMARK 465 TYR A 556 REMARK 465 LEU A 557 REMARK 465 VAL A 558 REMARK 465 GLY A 559 REMARK 465 SER A 560 REMARK 465 ILE A 561 REMARK 465 SER A 562 REMARK 465 GLN A 563 REMARK 465 LEU A 564 REMARK 465 GLY A 565 REMARK 465 ASP A 566 REMARK 465 TRP A 567 REMARK 465 GLU A 568 REMARK 465 THR A 569 REMARK 465 SER A 570 REMARK 465 ASP A 571 REMARK 465 GLY A 572 REMARK 465 ILE A 573 REMARK 465 ALA A 574 REMARK 465 LEU A 575 REMARK 465 SER A 576 REMARK 465 ALA A 577 REMARK 465 ASP A 578 REMARK 465 LYS A 579 REMARK 465 TYR A 580 REMARK 465 THR A 581 REMARK 465 SER A 582 REMARK 465 SER A 583 REMARK 465 ASP A 584 REMARK 465 PRO A 585 REMARK 465 LEU A 586 REMARK 465 TRP A 587 REMARK 465 TYR A 588 REMARK 465 VAL A 589 REMARK 465 THR A 590 REMARK 465 VAL A 591 REMARK 465 THR A 592 REMARK 465 LEU A 593 REMARK 465 PRO A 594 REMARK 465 ALA A 595 REMARK 465 GLY A 596 REMARK 465 GLU A 597 REMARK 465 SER A 598 REMARK 465 PHE A 599 REMARK 465 GLU A 600 REMARK 465 TYR A 601 REMARK 465 LYS A 602 REMARK 465 PHE A 603 REMARK 465 ILE A 604 REMARK 465 ARG A 605 REMARK 465 ILE A 606 REMARK 465 GLU A 607 REMARK 465 SER A 608 REMARK 465 ASP A 609 REMARK 465 ASP A 610 REMARK 465 SER A 611 REMARK 465 VAL A 612 REMARK 465 GLU A 613 REMARK 465 TRP A 614 REMARK 465 GLU A 615 REMARK 465 SER A 616 REMARK 465 ASP A 617 REMARK 465 PRO A 618 REMARK 465 ASN A 619 REMARK 465 ARG A 620 REMARK 465 GLU A 621 REMARK 465 TYR A 622 REMARK 465 THR A 623 REMARK 465 VAL A 624 REMARK 465 PRO A 625 REMARK 465 GLN A 626 REMARK 465 ALA A 627 REMARK 465 CYS A 628 REMARK 465 GLY A 629 REMARK 465 THR A 630 REMARK 465 SER A 631 REMARK 465 THR A 632 REMARK 465 ALA A 633 REMARK 465 THR A 634 REMARK 465 VAL A 635 REMARK 465 THR A 636 REMARK 465 ASP A 637 REMARK 465 THR A 638 REMARK 465 TRP A 639 REMARK 465 ARG A 640 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 27 11.05 -146.56 REMARK 500 ASN A 69 62.34 31.79 REMARK 500 ASN A 93 10.00 -69.13 REMARK 500 ASP A 168 7.00 -66.15 REMARK 500 TYR A 171 71.47 -119.87 REMARK 500 ASP A 262 58.72 75.71 REMARK 500 ASN A 271 -51.54 -25.56 REMARK 500 GLU A 283 25.30 -76.95 REMARK 500 CYS A 286 63.92 -68.95 REMARK 500 ASN A 337 -18.24 79.43 REMARK 500 LEU A 365 88.49 -155.42 REMARK 500 LEU A 372 -59.15 -2.75 REMARK 500 ASP A 427 147.05 -36.24 REMARK 500 SER A 435 -163.57 60.91 REMARK 500 PRO A 470 -179.71 -69.61 REMARK 500 ALA A 475 83.40 -60.34 REMARK 500 SER A 489 -158.61 -148.58 REMARK 500 REMARK 500 REMARK: NULL DBREF 6FRV A 25 640 UNP P69328 AMYG_ASPNG 25 640 SEQRES 1 A 616 ALA THR LEU ASP SER TRP LEU SER ASN GLU ALA THR VAL SEQRES 2 A 616 ALA ARG THR ALA ILE LEU ASN ASN ILE GLY ALA ASP GLY SEQRES 3 A 616 ALA TRP VAL SER GLY ALA ASP SER GLY ILE VAL VAL ALA SEQRES 4 A 616 SER PRO SER THR ASP ASN PRO ASP TYR PHE TYR THR TRP SEQRES 5 A 616 THR ARG ASP SER GLY LEU VAL LEU LYS THR LEU VAL ASP SEQRES 6 A 616 LEU PHE ARG ASN GLY ASP THR SER LEU LEU SER THR ILE SEQRES 7 A 616 GLU ASN TYR ILE SER ALA GLN ALA ILE VAL GLN GLY ILE SEQRES 8 A 616 SER ASN PRO SER GLY ASP LEU SER SER GLY ALA GLY LEU SEQRES 9 A 616 GLY GLU PRO LYS PHE ASN VAL ASP GLU THR ALA TYR THR SEQRES 10 A 616 GLY SER TRP GLY ARG PRO GLN ARG ASP GLY PRO ALA LEU SEQRES 11 A 616 ARG ALA THR ALA MET ILE GLY PHE GLY GLN TRP LEU LEU SEQRES 12 A 616 ASP ASN GLY TYR THR SER THR ALA THR ASP ILE VAL TRP SEQRES 13 A 616 PRO LEU VAL ARG ASN ASP LEU SER TYR VAL ALA GLN TYR SEQRES 14 A 616 TRP ASN GLN THR GLY TYR ASP LEU TRP GLU GLU VAL ASN SEQRES 15 A 616 GLY SER SER PHE PHE THR ILE ALA VAL GLN HIS ARG ALA SEQRES 16 A 616 LEU VAL GLU GLY SER ALA PHE ALA THR ALA VAL GLY SER SEQRES 17 A 616 SER CYS SER TRP CYS ASP SER GLN ALA PRO GLU ILE LEU SEQRES 18 A 616 CYS TYR LEU GLN SER PHE TRP THR GLY SER PHE ILE LEU SEQRES 19 A 616 ALA ASN PHE ASP SER SER ARG SER GLY LYS ASP ALA ASN SEQRES 20 A 616 THR LEU LEU GLY SER ILE HIS THR PHE ASP PRO GLU ALA SEQRES 21 A 616 ALA CYS ASP ASP SER THR PHE GLN PRO CYS SER PRO ARG SEQRES 22 A 616 ALA LEU ALA ASN HIS LYS GLU VAL VAL ASP SER PHE ARG SEQRES 23 A 616 SER ILE TYR THR LEU ASN ASP GLY LEU SER ASP SER GLU SEQRES 24 A 616 ALA VAL ALA VAL GLY ARG TYR PRO GLU ASP THR TYR TYR SEQRES 25 A 616 ASN GLY ASN PRO TRP PHE LEU CYS THR LEU ALA ALA ALA SEQRES 26 A 616 GLU GLN LEU TYR ASP ALA LEU TYR GLN TRP ASP LYS GLN SEQRES 27 A 616 GLY SER LEU GLU VAL THR ASP VAL SER LEU ASP PHE PHE SEQRES 28 A 616 LYS ALA LEU TYR SER ASP ALA ALA THR GLY THR TYR SER SEQRES 29 A 616 SER SER SER SER THR TYR SER SER ILE VAL ASP ALA VAL SEQRES 30 A 616 LYS THR PHE ALA ASP GLY PHE VAL SER ILE VAL GLU THR SEQRES 31 A 616 HIS ALA ALA SER ASN GLY SER MET SER GLU GLN TYR ASP SEQRES 32 A 616 LYS SER ASP GLY GLU GLN LEU SER ALA ARG ASP LEU THR SEQRES 33 A 616 TRP SER TYR ALA ALA LEU LEU THR ALA ASN ASN ARG ARG SEQRES 34 A 616 ASN SER VAL VAL PRO ALA SER TRP GLY GLU THR SER ALA SEQRES 35 A 616 SER SER VAL PRO GLY THR CYS ALA ALA THR SER ALA ILE SEQRES 36 A 616 GLY THR TYR SER SER VAL THR VAL THR SER TRP PRO SER SEQRES 37 A 616 ILE VAL ALA THR GLY GLY THR THR THR THR ALA THR PRO SEQRES 38 A 616 THR GLY SER GLY SER VAL THR SER THR SER LYS THR THR SEQRES 39 A 616 ALA THR ALA SER LYS THR SER THR SER THR SER SER THR SEQRES 40 A 616 SER CYS THR THR PRO THR ALA VAL ALA VAL THR PHE ASP SEQRES 41 A 616 LEU THR ALA THR THR THR TYR GLY GLU ASN ILE TYR LEU SEQRES 42 A 616 VAL GLY SER ILE SER GLN LEU GLY ASP TRP GLU THR SER SEQRES 43 A 616 ASP GLY ILE ALA LEU SER ALA ASP LYS TYR THR SER SER SEQRES 44 A 616 ASP PRO LEU TRP TYR VAL THR VAL THR LEU PRO ALA GLY SEQRES 45 A 616 GLU SER PHE GLU TYR LYS PHE ILE ARG ILE GLU SER ASP SEQRES 46 A 616 ASP SER VAL GLU TRP GLU SER ASP PRO ASN ARG GLU TYR SEQRES 47 A 616 THR VAL PRO GLN ALA CYS GLY THR SER THR ALA THR VAL SEQRES 48 A 616 THR ASP THR TRP ARG HET NAG B 1 14 HET NAG B 2 14 HET NAG A 703 14 HET MAN A 704 11 HET MAN A 705 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 4 MAN 2(C6 H12 O6) FORMUL 6 HOH *27(H2 O) HELIX 1 AA1 LEU A 27 ASN A 45 1 19 HELIX 2 AA2 THR A 77 ASN A 93 1 17 HELIX 3 AA3 ASP A 95 SER A 97 5 3 HELIX 4 AA4 LEU A 98 GLY A 114 1 17 HELIX 5 AA5 ARG A 149 ASP A 168 1 20 HELIX 6 AA6 TYR A 171 ILE A 178 1 8 HELIX 7 AA7 ILE A 178 TRP A 194 1 17 HELIX 8 AA8 PHE A 210 VAL A 230 1 21 HELIX 9 AA9 CYS A 234 SER A 250 1 17 HELIX 10 AB1 ASP A 269 HIS A 278 1 10 HELIX 11 AB2 SER A 295 SER A 308 1 14 HELIX 12 AB3 TYR A 313 ASP A 317 5 5 HELIX 13 AB4 THR A 334 GLY A 338 5 5 HELIX 14 AB5 TRP A 341 GLY A 363 1 23 HELIX 15 AB6 LEU A 372 ALA A 377 1 6 HELIX 16 AB7 SER A 391 ALA A 416 1 26 HELIX 17 AB8 LEU A 439 ASN A 454 1 16 SHEET 1 AA1 2 THR A 75 TRP A 76 0 SHEET 2 AA1 2 LYS A 132 PHE A 133 -1 O PHE A 133 N THR A 75 SHEET 1 AA2 3 GLY A 198 TYR A 199 0 SHEET 2 AA2 3 ASN A 206 SER A 209 -1 O GLY A 207 N GLY A 198 SHEET 3 AA2 3 ASN A 260 PHE A 261 -1 O PHE A 261 N SER A 208 SHEET 1 AA3 2 GLU A 366 VAL A 367 0 SHEET 2 AA3 2 GLY A 385 THR A 386 -1 O GLY A 385 N VAL A 367 SHEET 1 AA4 2 GLN A 425 TYR A 426 0 SHEET 2 AA4 2 GLN A 433 LEU A 434 -1 O LEU A 434 N GLN A 425 SSBOND 1 CYS A 234 CYS A 237 1555 1555 2.05 SSBOND 2 CYS A 246 CYS A 473 1555 1555 2.04 SSBOND 3 CYS A 286 CYS A 294 1555 1555 2.03 LINK ND2 ASN A 195 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 419 C1 NAG A 703 1555 1555 1.45 LINK OG SER A 483 C1 MAN A 704 1555 1555 1.45 LINK OG SER A 484 C1 MAN A 705 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 CISPEP 1 GLY A 47 ALA A 48 0 12.53 CISPEP 2 ASN A 69 PRO A 70 0 -3.62 CISPEP 3 ARG A 146 PRO A 147 0 3.18 CRYST1 56.369 73.125 102.880 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017740 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009720 0.00000