HEADER TRANSFERASE 16-FEB-18 6FRW TITLE X-RAY STRUCTURE OF THE LEVANSUCRASE FROM ERWINIA TASMANIENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEVANSUCRASE (BETA-D-FRUCTOFURANOSYL TRANSFERASE); COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.1.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ERWINIA TASMANIENSIS; SOURCE 3 ORGANISM_TAXID: 338565; SOURCE 4 GENE: LSC, ETA_34670; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS FRUCTOSYLTRANSFERASE, SUCROSE HYDROLASE, FRUCTANS PRODUCTION, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.POLSINELLI,M.SALOMONE-STAGNI,R.CALIANDRO,N.DEMITRI,S.BENINI REVDAT 1 06-FEB-19 6FRW 0 JRNL AUTH I.POLSINELLI,R.CALIANDRO,M.SALOMONE-STAGNI,N.DEMITRI, JRNL AUTH 2 M.REJZEK,R.A.FIELD,S.BENINI JRNL TITL COMPARISON OF THE LEVANSUCRASE FROM THE EPIPHYTE ERWINIA JRNL TITL 2 TASMANIENSIS VS ITS HOMOLOGUE FROM THE PHYTOPATHOGEN ERWINIA JRNL TITL 3 AMYLOVORA. JRNL REF INT. J. BIOL. MACROMOL. V. 127 496 2019 JRNL REFN ISSN 1879-0003 JRNL PMID 30660564 JRNL DOI 10.1016/J.IJBIOMAC.2019.01.074 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 75870 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.1618 - 4.5580 0.99 2884 160 0.1806 0.1918 REMARK 3 2 4.5580 - 3.6185 0.99 2759 150 0.1432 0.1686 REMARK 3 3 3.6185 - 3.1613 1.00 2744 142 0.1531 0.1809 REMARK 3 4 3.1613 - 2.8724 1.00 2729 132 0.1580 0.1883 REMARK 3 5 2.8724 - 2.6665 1.00 2683 147 0.1487 0.1836 REMARK 3 6 2.6665 - 2.5093 1.00 2730 126 0.1537 0.2023 REMARK 3 7 2.5093 - 2.3837 1.00 2677 139 0.1454 0.1784 REMARK 3 8 2.3837 - 2.2799 1.00 2663 147 0.1442 0.1670 REMARK 3 9 2.2799 - 2.1922 1.00 2670 145 0.1546 0.1668 REMARK 3 10 2.1922 - 2.1165 1.00 2687 133 0.1519 0.1701 REMARK 3 11 2.1165 - 2.0503 1.00 2653 138 0.1769 0.2239 REMARK 3 12 2.0503 - 1.9917 1.00 2652 154 0.1782 0.2074 REMARK 3 13 1.9917 - 1.9393 1.00 2664 121 0.1777 0.2215 REMARK 3 14 1.9393 - 1.8920 1.00 2641 141 0.1817 0.2176 REMARK 3 15 1.8920 - 1.8490 1.00 2660 150 0.1900 0.2234 REMARK 3 16 1.8490 - 1.8096 1.00 2659 113 0.2043 0.2549 REMARK 3 17 1.8096 - 1.7734 1.00 2640 151 0.2184 0.2307 REMARK 3 18 1.7734 - 1.7400 1.00 2653 129 0.2297 0.2827 REMARK 3 19 1.7400 - 1.7089 1.00 2634 147 0.2491 0.2772 REMARK 3 20 1.7089 - 1.6799 1.00 2630 139 0.2626 0.3065 REMARK 3 21 1.6799 - 1.6528 1.00 2633 147 0.2730 0.2768 REMARK 3 22 1.6528 - 1.6274 1.00 2622 146 0.3042 0.3176 REMARK 3 23 1.6274 - 1.6035 0.99 2639 143 0.3083 0.3961 REMARK 3 24 1.6035 - 1.5809 0.99 2647 125 0.3231 0.3784 REMARK 3 25 1.5809 - 1.5595 0.99 2583 156 0.3289 0.4023 REMARK 3 26 1.5595 - 1.5392 0.99 2604 149 0.3523 0.3688 REMARK 3 27 1.5392 - 1.5200 0.99 2620 138 0.3735 0.4243 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3536 REMARK 3 ANGLE : 0.800 4843 REMARK 3 CHIRALITY : 0.054 513 REMARK 3 PLANARITY : 0.005 635 REMARK 3 DIHEDRAL : 13.402 2111 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6FRW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008529. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76050 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 45.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% GLYCEROL, 14% PEG 4000, 1.5MM REMARK 280 MANGANESE(II) CHLORIDE TETRAHYDRATE, 1.5 MM COBALT(II) CHLORIDE REMARK 280 HEXAHYDRATE , 1.5 MM NICKEL(II) CHLORIDE HEXAHYDRATE, 1.5 MM REMARK 280 ZINC ACETATE DIHYDRATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.47250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 64.24650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 64.24650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.73625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 64.24650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 64.24650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.20875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 64.24650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.24650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 14.73625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 64.24650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.24650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.20875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 29.47250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 7 CG CD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 882 O HOH A 914 2.03 REMARK 500 O HOH A 646 O HOH A 934 2.07 REMARK 500 O HOH A 914 O HOH A 944 2.08 REMARK 500 O HOH A 838 O HOH A 948 2.09 REMARK 500 O HOH A 928 O HOH A 978 2.14 REMARK 500 O HOH A 814 O HOH A 965 2.15 REMARK 500 OD2 ASP A 402 O HOH A 602 2.18 REMARK 500 O HOH A 911 O HOH A 931 2.18 REMARK 500 O HOH A 845 O HOH A 881 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 332 CA THR A 332 C 0.169 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 34 32.01 -92.32 REMARK 500 TRP A 45 -103.94 -140.02 REMARK 500 ASN A 74 42.49 -96.65 REMARK 500 ASP A 82 -165.11 -76.00 REMARK 500 SER A 107 142.53 -171.83 REMARK 500 THR A 152 96.96 73.75 REMARK 500 ASN A 196 112.32 -160.11 REMARK 500 PHE A 201 107.70 -160.58 REMARK 500 ASP A 203 65.24 76.47 REMARK 500 ASP A 203 72.24 69.80 REMARK 500 VAL A 282 -54.63 -127.20 REMARK 500 ARG A 288 55.59 36.63 REMARK 500 ARG A 288 54.38 37.26 REMARK 500 SER A 336 -37.40 74.24 REMARK 500 ASP A 367 -79.72 -103.96 REMARK 500 TRP A 371 -79.74 -115.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR A 332 10.65 REMARK 500 THR A 332 12.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 509 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 52 OD2 REMARK 620 2 ASP A 54 OD2 107.3 REMARK 620 3 ASP A 56 OD1 114.6 113.5 REMARK 620 4 HOH A 857 O 108.5 107.3 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 508 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 140 OD1 REMARK 620 2 GLU A 141 OE2 99.1 REMARK 620 3 HOH A 927 O 112.4 102.7 REMARK 620 4 HIS A 178 ND1 94.7 60.7 150.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 510 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 305 ND1 REMARK 620 2 ASP A 317 OD1 112.3 REMARK 620 3 HOH A 925 O 113.6 123.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 510 DBREF 6FRW A 5 415 UNP B2VCC3 B2VCC3_ERWT9 5 415 SEQRES 1 A 411 ASN TYR LYS PRO THR PRO TRP THR ARG ALA ASP ALA LEU SEQRES 2 A 411 LYS VAL HIS SER ASP ASP PRO THR THR THR GLN PRO LEU SEQRES 3 A 411 VAL ASP VAL ALA PHE PRO VAL MET SER GLU GLU VAL PHE SEQRES 4 A 411 ILE TRP ASP THR MET PRO LEU ARG ASP PHE ASP GLY ASP SEQRES 5 A 411 ILE VAL SER VAL ASN GLY TRP CYS VAL ILE PHE THR LEU SEQRES 6 A 411 THR ALA ASP ARG ASN THR ASN ASN PRO ASP PHE GLN ASP SEQRES 7 A 411 GLU ASN GLY ASN TYR ASP ILE LYS ARG ASP TRP GLU ASP SEQRES 8 A 411 ARG HIS GLY ARG ALA ARG ILE CYS TYR TRP TYR SER ARG SEQRES 9 A 411 THR GLY LYS ASP TRP ILE PHE GLY GLY ARG VAL MET ALA SEQRES 10 A 411 GLU GLY VAL SER PRO THR THR ARG GLU TRP ALA GLY THR SEQRES 11 A 411 PRO ILE LEU LEU ASN ASP GLU GLY ASP ILE ASP LEU TYR SEQRES 12 A 411 TYR THR CYS VAL THR PRO GLY ALA THR ILE ALA LYS VAL SEQRES 13 A 411 ARG GLY LYS ILE VAL THR SER ASP GLU GLY VAL SER LEU SEQRES 14 A 411 GLU GLY PHE GLN HIS VAL LYS SER LEU PHE SER ALA ASP SEQRES 15 A 411 GLY LYS ILE TYR GLN THR GLU GLU GLN ASN ALA TYR TRP SEQRES 16 A 411 ASN PHE ARG ASP PRO SER PRO PHE ILE ASP LYS ASN ASP SEQRES 17 A 411 GLY LYS LEU TYR MET LEU PHE GLU GLY ASN VAL ALA GLY SEQRES 18 A 411 SER ARG GLY THR HIS GLU ILE THR GLN GLU ASP MET GLY SEQRES 19 A 411 SER VAL PRO PRO GLY TYR GLU ASN VAL GLY GLY ALA ARG SEQRES 20 A 411 TYR GLN VAL GLY CYS ILE GLY LEU ALA VAL ALA LYS ASP SEQRES 21 A 411 LEU SER GLY ASP GLU TRP GLU ILE LEU PRO PRO LEU ILE SEQRES 22 A 411 THR ALA VAL GLY VAL ASN ASP GLN THR GLU ARG PRO HIS SEQRES 23 A 411 PHE VAL PHE GLN GLU GLY LYS TYR TYR LEU PHE THR ILE SEQRES 24 A 411 SER HIS LYS TYR THR PHE ALA ASP ASN LEU THR GLY PRO SEQRES 25 A 411 ASP GLY VAL TYR GLY PHE VAL SER ASN GLN LEU THR GLY SEQRES 26 A 411 PRO TYR THR PRO MET ASN SER SER GLY LEU VAL LEU GLY SEQRES 27 A 411 ASN PRO SER SER GLN PRO PHE GLN THR TYR SER HIS TYR SEQRES 28 A 411 VAL MET PRO ASN GLY LEU VAL THR SER PHE ILE ASP SER SEQRES 29 A 411 VAL PRO TRP GLU GLY GLU LYS PHE ARG ILE GLY GLY THR SEQRES 30 A 411 GLU ALA PRO THR VAL LYS ILE LEU LEU LYS GLY ASP ARG SEQRES 31 A 411 SER PHE VAL VAL ASP SER PHE ASP TYR GLY TYR ILE PRO SEQRES 32 A 411 ALA MET LYS ASP ILE ILE LEU LYS HET GOL A 501 14 HET GOL A 502 14 HET GOL A 503 14 HET GOL A 504 14 HET GOL A 505 14 HET GOL A 506 14 HET GOL A 507 14 HET ZN A 508 1 HET ZN A 509 1 HET ZN A 510 1 HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 7(C3 H8 O3) FORMUL 9 ZN 3(ZN 2+) FORMUL 12 HOH *402(H2 O) HELIX 1 AA1 THR A 12 LYS A 18 1 7 HELIX 2 AA2 ASP A 23 THR A 27 5 5 HELIX 3 AA3 ASN A 77 GLN A 81 5 5 HELIX 4 AA4 ASP A 88 ASP A 95 1 8 HELIX 5 AA5 ARG A 96 ALA A 100 5 5 HELIX 6 AA6 THR A 233 GLY A 238 1 6 HELIX 7 AA7 GLY A 249 GLN A 253 5 5 HELIX 8 AA8 HIS A 305 PHE A 309 5 5 SHEET 1 AA1 5 THR A 9 PRO A 10 0 SHEET 2 AA1 5 TRP A 270 THR A 278 1 O LEU A 276 N THR A 9 SHEET 3 AA1 5 GLY A 255 ALA A 262 -1 N VAL A 261 O GLU A 271 SHEET 4 AA1 5 LEU A 215 ASN A 222 -1 N PHE A 219 O GLY A 258 SHEET 5 AA1 5 ARG A 202 ILE A 208 -1 N PHE A 207 O TYR A 216 SHEET 1 AA2 4 VAL A 42 PRO A 49 0 SHEET 2 AA2 4 CYS A 64 ASP A 72 -1 O PHE A 67 N MET A 48 SHEET 3 AA2 4 ARG A 101 SER A 107 -1 O SER A 107 N CYS A 64 SHEET 4 AA2 4 ILE A 114 ARG A 118 -1 O ILE A 114 N TYR A 106 SHEET 1 AA3 2 VAL A 58 VAL A 60 0 SHEET 2 AA3 2 LYS A 410 ILE A 412 1 O ILE A 412 N SER A 59 SHEET 1 AA4 4 ARG A 129 LEU A 137 0 SHEET 2 AA4 4 ASP A 143 VAL A 151 -1 O ASP A 145 N ILE A 136 SHEET 3 AA4 4 ALA A 155 THR A 166 -1 O THR A 156 N CYS A 150 SHEET 4 AA4 4 VAL A 171 GLU A 174 -1 O SER A 172 N VAL A 165 SHEET 1 AA5 4 ARG A 129 LEU A 137 0 SHEET 2 AA5 4 ASP A 143 VAL A 151 -1 O ASP A 145 N ILE A 136 SHEET 3 AA5 4 ALA A 155 THR A 166 -1 O THR A 156 N CYS A 150 SHEET 4 AA5 4 VAL A 179 SER A 184 -1 O LYS A 180 N LYS A 159 SHEET 1 AA6 4 GLU A 287 GLN A 294 0 SHEET 2 AA6 4 LYS A 297 SER A 304 -1 O PHE A 301 N HIS A 290 SHEET 3 AA6 4 GLY A 318 SER A 324 -1 O TYR A 320 N THR A 302 SHEET 4 AA6 4 THR A 332 PRO A 333 -1 O THR A 332 N VAL A 323 SHEET 1 AA7 4 GLU A 287 GLN A 294 0 SHEET 2 AA7 4 LYS A 297 SER A 304 -1 O PHE A 301 N HIS A 290 SHEET 3 AA7 4 GLY A 318 SER A 324 -1 O TYR A 320 N THR A 302 SHEET 4 AA7 4 LEU A 339 GLY A 342 -1 O VAL A 340 N VAL A 319 SHEET 1 AA8 3 THR A 351 VAL A 356 0 SHEET 2 AA8 3 LEU A 361 PRO A 370 -1 O THR A 363 N TYR A 355 SHEET 3 AA8 3 PHE A 376 GLU A 382 -1 O THR A 381 N ILE A 366 SHEET 1 AA9 4 THR A 351 VAL A 356 0 SHEET 2 AA9 4 LEU A 361 PRO A 370 -1 O THR A 363 N TYR A 355 SHEET 3 AA9 4 PRO A 384 LYS A 391 -1 O VAL A 386 N VAL A 362 SHEET 4 AA9 4 ARG A 394 TYR A 403 -1 O PHE A 401 N THR A 385 LINK OD2 ASP A 52 ZN ZN A 509 1555 1555 2.17 LINK OD2 ASP A 54 ZN ZN A 509 1555 1555 2.07 LINK OD1 ASP A 56 ZN ZN A 509 1555 1555 2.36 LINK OD1 ASP A 140 ZN ZN A 508 1555 1555 2.00 LINK OE2 GLU A 141 ZN ZN A 508 1555 1555 1.96 LINK ND1 HIS A 305 ZN ZN A 510 1555 1555 2.23 LINK OD1 ASP A 317 ZN ZN A 510 1555 1555 2.10 LINK ZN ZN A 508 O HOH A 927 1555 1555 2.23 LINK ZN ZN A 509 O HOH A 857 1555 1555 2.31 LINK ZN ZN A 510 O HOH A 925 1555 1555 2.27 LINK ND1 HIS A 178 ZN ZN A 508 1555 4554 2.05 CISPEP 1 THR A 152 PRO A 153 0 1.78 CISPEP 2 GLY A 329 PRO A 330 0 2.72 SITE 1 AC1 5 LYS A 111 PHE A 401 ASP A 402 HOH A 705 SITE 2 AC1 5 HOH A 738 SITE 1 AC2 7 TRP A 45 ASP A 46 HIS A 97 TRP A 131 SITE 2 AC2 7 HOH A 637 HOH A 706 HOH A 733 SITE 1 AC3 6 ASN A 196 TYR A 198 ARG A 227 TYR A 252 SITE 2 AC3 6 GLN A 253 HOH A 691 SITE 1 AC4 6 CYS A 64 ARG A 108 ALA A 408 HOH A 606 SITE 2 AC4 6 HOH A 608 HOH A 679 SITE 1 AC5 6 HIS A 97 GLY A 98 ARG A 129 THR A 152 SITE 2 AC5 6 HOH A 654 HOH A 791 SITE 1 AC6 6 ASP A 209 LYS A 210 PHE A 293 GLY A 296 SITE 2 AC6 6 LYS A 297 HOH A 836 SITE 1 AC7 7 VAL A 42 THR A 70 ALA A 71 ASP A 72 SITE 2 AC7 7 ARG A 101 ARG A 118 HOH A 697 SITE 1 AC8 5 ASP A 140 GLU A 141 HIS A 178 HOH A 601 SITE 2 AC8 5 HOH A 927 SITE 1 AC9 4 ASP A 52 ASP A 54 ASP A 56 HOH A 857 SITE 1 AD1 3 HIS A 305 ASP A 317 HOH A 925 CRYST1 128.493 128.493 58.945 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007783 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007783 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016965 0.00000