HEADER BIOSYNTHETIC PROTEIN 21-FEB-18 6FTE TITLE CRYSTAL STRUCTURE OF AN (R)-SELECTIVE AMINE TRANSAMINASE FROM TITLE 2 EXOPHIALA XENOBIOTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINE TRANSAMINASE (FOLD IV); COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EXOPHIALA XENOBIOTICA; SOURCE 3 ORGANISM_TAXID: 348802; SOURCE 4 GENE: PV05_00535; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSAMINASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.TELZEROW,M.HAKANSSON,M.SCHURRMANN,H.SCHWAB,K.STEINER REVDAT 2 29-JAN-20 6FTE 1 REMARK REVDAT 1 09-JAN-19 6FTE 0 JRNL AUTH A.TELZEROW,J.PARIS,M.HAKANSSON,J.GONZALEZ-SABIN, JRNL AUTH 2 N.RIOS-LOMBARDIA,M.SCHURRMANN,H.GROGER,R.KOURIST,H.SCHWAB, JRNL AUTH 3 K.STEINER JRNL TITL AMINE TRANSAMINASE FROM EXOPHIALA XENOBIOTICA - CRYSTAL JRNL TITL 2 STRUCTURE AND ENGINEERING OF A FOLD IV TRANSAMINASE THAT JRNL TITL 3 NATURALLY CONVERTS BIARYL KETONES JRNL REF ACS CATALYSIS 2018 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.8B04524 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 45172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.138 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2407 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.53 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3172 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 180 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2521 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 313 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : -0.97000 REMARK 3 B33 (A**2) : 0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.085 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.065 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2661 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2482 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3603 ; 1.909 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5756 ; 1.068 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 332 ; 6.041 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;33.421 ;23.879 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 463 ;13.345 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.031 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 384 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2972 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 551 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1314 ; 1.845 ; 1.297 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1312 ; 1.825 ; 1.292 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1650 ; 2.136 ; 1.944 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1651 ; 2.144 ; 1.946 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1347 ; 2.980 ; 1.628 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1348 ; 2.979 ; 1.629 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1954 ; 3.159 ; 2.298 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3073 ; 3.246 ;16.417 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3074 ; 3.252 ;16.431 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5142 ; 3.151 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 191 ;18.110 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5204 ; 7.216 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6FTE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1200008577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47608 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUMSULPHATE, 0.1 M SODIUM REMARK 280 ACETATE PH 4.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.36300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.36300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 27.21550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.22600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 27.21550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.22600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.36300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 27.21550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.22600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.36300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 27.21550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.22600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 533 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 322 REMARK 465 LYS B 323 REMARK 465 SER B 324 REMARK 465 ALA B 325 REMARK 465 ASN B 326 REMARK 465 GLY B 327 REMARK 465 THR B 328 REMARK 465 ASN B 329 REMARK 465 GLY B 330 REMARK 465 VAL B 331 REMARK 465 ASN B 332 REMARK 465 GLY B 333 REMARK 465 VAL B 334 REMARK 465 HIS B 335 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 647 O HOH B 647 3554 0.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 5 CD GLU B 5 OE2 0.085 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 70 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 72 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 PRO B 90 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG B 155 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 PHE B 202 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 PHE B 202 CB - CG - CD1 ANGL. DEV. = 5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 211 -101.16 -115.30 REMARK 500 ASP B 230 -64.30 -92.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 811 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B 812 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH B 813 DISTANCE = 6.74 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 404 DBREF1 6FTE B 1 335 UNP A0A0D2C5V9_9EURO DBREF2 6FTE B A0A0D2C5V9 1 335 SEQRES 1 B 335 MET ALA THR MET GLU LYS VAL PHE ALA GLY TYR GLU ALA SEQRES 2 B 335 ARG GLN LYS VAL LEU GLU ALA SER THR ASN PRO PHE ALA SEQRES 3 B 335 LYS GLY VAL ALA TRP VAL GLU GLY LYS LEU VAL PRO VAL SEQRES 4 B 335 ASN GLU ALA ARG ILE PRO LEU MET ASP GLN GLY PHE LEU SEQRES 5 B 335 HIS SER ASP LEU THR TYR ASP VAL PRO SER VAL TRP ASP SEQRES 6 B 335 GLY ARG PHE PHE ARG LEU ASP ASP HIS LEU ASP ARG PHE SEQRES 7 B 335 GLU LEU SER CYS SER LYS MET ARG PHE LYS MET PRO LEU SEQRES 8 B 335 PRO ARG GLN GLU VAL LYS ARG ILE LEU VAL ASP MET VAL SEQRES 9 B 335 ALA LYS SER GLY ILE LYS ASP ALA PHE VAL GLU ILE ILE SEQRES 10 B 335 VAL THR ARG GLY LEU LYS GLY VAL ARG GLY LEU LYS ALA SEQRES 11 B 335 GLY GLU SER LEU THR ASN ASN LEU TYR MET TRP ILE GLN SEQRES 12 B 335 PRO TYR ILE TRP VAL MET GLU PRO GLU MET GLN ARG THR SEQRES 13 B 335 GLY GLY SER ALA ILE ILE ALA ARG THR VAL LYS ARG THR SEQRES 14 B 335 SER PRO GLY SER MET ASP PRO THR VAL LYS ASN LEU GLN SEQRES 15 B 335 TRP GLY ASP LEU THR ARG GLY MET LEU GLU ALA GLN ASP SEQRES 16 B 335 ARG GLY ALA ASP TYR PRO PHE LEU THR ASP GLY ASP GLY SEQRES 17 B 335 ASN ILE THR GLU GLY SER GLY PHE ASN ILE VAL PHE ILE SEQRES 18 B 335 LYS ASP GLY VAL LEU TYR THR PRO ASP ARG GLY VAL LEU SEQRES 19 B 335 LYS GLY VAL THR ARG LYS SER VAL ALA ASP ALA ALA LYS SEQRES 20 B 335 ALA ASN GLY ILE GLU MET ARG ILE GLU PHE VAL PRO THR SEQRES 21 B 335 GLU MET ALA TYR GLN CYS ASP GLU CYS PHE MET CYS THR SEQRES 22 B 335 THR ALA GLY GLY VAL MET PRO ILE THR SER MET ASP GLY SEQRES 23 B 335 GLN PRO ILE GLY ASP GLY LYS VAL GLY PRO VAL THR LYS SEQRES 24 B 335 GLU ILE TRP ASP GLY TYR TRP ALA MET HIS TYR ASP ASP SEQRES 25 B 335 LYS TYR SER PHE LYS ILE ASP TYR GLU GLU LYS SER ALA SEQRES 26 B 335 ASN GLY THR ASN GLY VAL ASN GLY VAL HIS HET PLP B 401 15 HET GOL B 402 6 HET GOL B 403 6 HET ACT B 404 4 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 HOH *313(H2 O) HELIX 1 AA1 MET B 1 ALA B 20 1 20 HELIX 2 AA2 ASN B 40 ALA B 42 5 3 HELIX 3 AA3 ASP B 48 HIS B 53 1 6 HELIX 4 AA4 ARG B 70 MET B 85 1 16 HELIX 5 AA5 PRO B 92 GLY B 108 1 17 HELIX 6 AA6 GLU B 150 GLY B 157 1 8 HELIX 7 AA7 TRP B 183 ARG B 196 1 14 HELIX 8 AA8 GLY B 236 ASN B 249 1 14 HELIX 9 AA9 GLU B 261 CYS B 266 1 6 HELIX 10 AB1 GLY B 295 MET B 308 1 14 HELIX 11 AB2 HIS B 309 ASP B 311 5 3 SHEET 1 AA1 5 LYS B 35 PRO B 38 0 SHEET 2 AA1 5 VAL B 29 VAL B 32 -1 N ALA B 30 O VAL B 37 SHEET 3 AA1 5 ASN B 137 PRO B 144 -1 O MET B 140 N TRP B 31 SHEET 4 AA1 5 ALA B 112 THR B 119 -1 N ILE B 117 O TYR B 139 SHEET 5 AA1 5 LEU B 56 ASP B 59 -1 N ASP B 59 O ILE B 116 SHEET 1 AA2 7 LYS B 35 PRO B 38 0 SHEET 2 AA2 7 VAL B 29 VAL B 32 -1 N ALA B 30 O VAL B 37 SHEET 3 AA2 7 ASN B 137 PRO B 144 -1 O MET B 140 N TRP B 31 SHEET 4 AA2 7 ALA B 112 THR B 119 -1 N ILE B 117 O TYR B 139 SHEET 5 AA2 7 SER B 62 TRP B 64 -1 N VAL B 63 O ALA B 112 SHEET 6 AA2 7 ARG B 67 PHE B 69 -1 O PHE B 69 N SER B 62 SHEET 7 AA2 7 SER B 315 LYS B 317 -1 O PHE B 316 N PHE B 68 SHEET 1 AA3 8 MET B 253 ILE B 255 0 SHEET 2 AA3 8 VAL B 225 THR B 228 1 N LEU B 226 O ARG B 254 SHEET 3 AA3 8 PHE B 216 LYS B 222 -1 N PHE B 220 O TYR B 227 SHEET 4 AA3 8 ILE B 210 GLY B 213 -1 N GLY B 213 O PHE B 216 SHEET 5 AA3 8 TYR B 200 THR B 204 -1 N LEU B 203 O THR B 211 SHEET 6 AA3 8 GLY B 158 ILE B 162 1 N ILE B 161 O PHE B 202 SHEET 7 AA3 8 GLY B 277 MET B 284 1 O THR B 282 N GLY B 158 SHEET 8 AA3 8 GLN B 287 PRO B 288 -1 O GLN B 287 N MET B 284 SHEET 1 AA4 6 MET B 253 ILE B 255 0 SHEET 2 AA4 6 VAL B 225 THR B 228 1 N LEU B 226 O ARG B 254 SHEET 3 AA4 6 PHE B 216 LYS B 222 -1 N PHE B 220 O TYR B 227 SHEET 4 AA4 6 GLU B 268 THR B 273 -1 O PHE B 270 N VAL B 219 SHEET 5 AA4 6 GLY B 277 MET B 284 -1 O MET B 279 N MET B 271 SHEET 6 AA4 6 GLN B 287 PRO B 288 -1 O GLN B 287 N MET B 284 LINK NZ LYS B 179 C4ABPLP B 401 1555 1555 1.26 SITE 1 AC1 16 TYR B 58 ARG B 77 LYS B 179 GLU B 212 SITE 2 AC1 16 PHE B 216 ASN B 217 LEU B 234 GLY B 236 SITE 3 AC1 16 VAL B 237 THR B 238 THR B 273 THR B 274 SITE 4 AC1 16 GOL B 402 HOH B 501 HOH B 539 HOH B 624 SITE 1 AC2 7 LYS B 179 GLY B 215 THR B 273 THR B 274 SITE 2 AC2 7 ALA B 275 PLP B 401 HOH B 600 SITE 1 AC3 4 ARG B 67 ASP B 312 PHE B 316 LYS B 317 SITE 1 AC4 2 PRO B 171 ARG B 231 CRYST1 54.431 148.452 78.726 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018372 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012702 0.00000