data_6FZN # _entry.id 6FZN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.302 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6FZN WWPDB D_1200009174 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6FZN _pdbx_database_status.recvd_initial_deposition_date 2018-03-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Janowski, R.' 1 ? 'Fuenzalida-Wernera, J.P.' 2 ? 'Mishra, K.' 3 ? 'Vetschera, P.' 4 ? 'Weidenfeld, I.' 5 ? 'Richter, K.' 6 ? 'Niessing, D.' 7 ? 'Ntziachristos, V.' 8 ? 'Stiel, A.C.' 9 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Struct. Biol.' _citation.journal_id_ASTM JSBIEM _citation.journal_id_CSD 0803 _citation.journal_id_ISSN 1095-8657 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 204 _citation.language ? _citation.page_first 519 _citation.page_last 522 _citation.title 'Crystal structure of a biliverdin-bound phycobiliprotein: Interdependence of oligomerization and chromophorylation.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jsb.2018.09.013 _citation.pdbx_database_id_PubMed 30287387 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fuenzalida-Werner, J.P.' 1 ? primary 'Janowski, R.' 2 ? primary 'Mishra, K.' 3 ? primary 'Weidenfeld, I.' 4 ? primary 'Niessing, D.' 5 ? primary 'Ntziachristos, V.' 6 ? primary 'Stiel, A.C.' 7 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 105.04 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6FZN _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.550 _cell.length_a_esd ? _cell.length_b 57.960 _cell.length_b_esd ? _cell.length_c 52.110 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FZN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man smURFP 15731.174 2 ? Y56R ? ? 2 non-polymer syn ;3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid ; 586.678 1 ? ? ? ? 3 water nat water 18.015 10 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKTSEQRVNIATLLTENKKKIVDKASQDLWRRHPDLIAPGGIAFSQRDRALCLRDRGWFLHLITFCLLAGDKGPIESIGL ISIREMYNSLGVPVPAMMESIRCLKEASLSLLDEEDANETAPYFDYIIKAMSHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MKTSEQRVNIATLLTENKKKIVDKASQDLWRRHPDLIAPGGIAFSQRDRALCLRDRGWFLHLITFCLLAGDKGPIESIGL ISIREMYNSLGVPVPAMMESIRCLKEASLSLLDEEDANETAPYFDYIIKAMSHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 THR n 1 4 SER n 1 5 GLU n 1 6 GLN n 1 7 ARG n 1 8 VAL n 1 9 ASN n 1 10 ILE n 1 11 ALA n 1 12 THR n 1 13 LEU n 1 14 LEU n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LYS n 1 19 LYS n 1 20 LYS n 1 21 ILE n 1 22 VAL n 1 23 ASP n 1 24 LYS n 1 25 ALA n 1 26 SER n 1 27 GLN n 1 28 ASP n 1 29 LEU n 1 30 TRP n 1 31 ARG n 1 32 ARG n 1 33 HIS n 1 34 PRO n 1 35 ASP n 1 36 LEU n 1 37 ILE n 1 38 ALA n 1 39 PRO n 1 40 GLY n 1 41 GLY n 1 42 ILE n 1 43 ALA n 1 44 PHE n 1 45 SER n 1 46 GLN n 1 47 ARG n 1 48 ASP n 1 49 ARG n 1 50 ALA n 1 51 LEU n 1 52 CYS n 1 53 LEU n 1 54 ARG n 1 55 ASP n 1 56 ARG n 1 57 GLY n 1 58 TRP n 1 59 PHE n 1 60 LEU n 1 61 HIS n 1 62 LEU n 1 63 ILE n 1 64 THR n 1 65 PHE n 1 66 CYS n 1 67 LEU n 1 68 LEU n 1 69 ALA n 1 70 GLY n 1 71 ASP n 1 72 LYS n 1 73 GLY n 1 74 PRO n 1 75 ILE n 1 76 GLU n 1 77 SER n 1 78 ILE n 1 79 GLY n 1 80 LEU n 1 81 ILE n 1 82 SER n 1 83 ILE n 1 84 ARG n 1 85 GLU n 1 86 MET n 1 87 TYR n 1 88 ASN n 1 89 SER n 1 90 LEU n 1 91 GLY n 1 92 VAL n 1 93 PRO n 1 94 VAL n 1 95 PRO n 1 96 ALA n 1 97 MET n 1 98 MET n 1 99 GLU n 1 100 SER n 1 101 ILE n 1 102 ARG n 1 103 CYS n 1 104 LEU n 1 105 LYS n 1 106 GLU n 1 107 ALA n 1 108 SER n 1 109 LEU n 1 110 SER n 1 111 LEU n 1 112 LEU n 1 113 ASP n 1 114 GLU n 1 115 GLU n 1 116 ASP n 1 117 ALA n 1 118 ASN n 1 119 GLU n 1 120 THR n 1 121 ALA n 1 122 PRO n 1 123 TYR n 1 124 PHE n 1 125 ASP n 1 126 TYR n 1 127 ILE n 1 128 ILE n 1 129 LYS n 1 130 ALA n 1 131 MET n 1 132 SER n 1 133 HIS n 1 134 HIS n 1 135 HIS n 1 136 HIS n 1 137 HIS n 1 138 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 138 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6FZN _struct_ref.pdbx_db_accession 6FZN _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6FZN A 1 ? 138 ? 6FZN 1 ? 138 ? 1 138 2 1 6FZN B 1 ? 138 ? 6FZN 1 ? 138 ? 1 138 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 9UY non-polymer . ;3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid ; 'Billeverdin IXa, bound form' 'C33 H38 N4 O6' 586.678 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6FZN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2% v/v 1,4-dioxane, 0.1 M Tris pH 8.0, 15% w/v Polyethylene glycol 3,350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-02-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000009 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000009 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 79.8 _reflns.entry_id 6FZN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8452 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.percent_possible_obs 98.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.9 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.83 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.57 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.99 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 98 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.8 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.811 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 5.75 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -3.19 _refine.aniso_B[2][2] -1.56 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -2.17 _refine.B_iso_max ? _refine.B_iso_mean 70 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6FZN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.50 _refine.ls_d_res_low 50.0 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7991 _refine.ls_number_reflns_R_free 461 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.67 _refine.ls_percent_reflns_R_free 5.5 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.21475 _refine.ls_R_factor_R_free 0.26258 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.21211 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.349 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 17.114 _refine.overall_SU_ML 0.346 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2102 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 2155 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.019 2189 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 2071 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.561 1.990 2954 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.964 3.000 4794 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.478 5.000 260 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 38.547 23.299 97 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.298 15.000 394 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.522 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.062 0.200 325 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.021 2383 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 443 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.864 7.994 1053 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.840 7.990 1052 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.622 11.966 1309 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.623 11.972 1310 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.841 8.414 1136 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.839 8.414 1137 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.761 12.503 1645 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 7.455 94.819 2534 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 7.457 94.809 2535 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_R_work 558 _refine_ls_shell.percent_reflns_obs 97.37 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.363 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.345 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6FZN _struct.title 'SMURFP-Y56R mutant in complex with biliverdin' _struct.pdbx_descriptor smURFP _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6FZN _struct_keywords.text 'smurfp, biliverdin, optoacustic, phycobiliprotein, FLUORESCENT PROTEIN' _struct_keywords.pdbx_keywords 'FLUORESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 4 ? ASN A 17 ? SER A 4 ASN A 17 1 ? 14 HELX_P HELX_P2 AA2 ASN A 17 ? HIS A 33 ? ASN A 17 HIS A 33 1 ? 17 HELX_P HELX_P3 AA3 PRO A 34 ? ILE A 37 ? PRO A 34 ILE A 37 5 ? 4 HELX_P HELX_P4 AA4 SER A 45 ? GLY A 70 ? SER A 45 GLY A 70 1 ? 26 HELX_P HELX_P5 AA5 LYS A 72 ? ILE A 78 ? LYS A 72 ILE A 78 1 ? 7 HELX_P HELX_P6 AA6 ILE A 78 ? LEU A 90 ? ILE A 78 LEU A 90 1 ? 13 HELX_P HELX_P7 AA7 VAL A 94 ? SER A 110 ? VAL A 94 SER A 110 1 ? 17 HELX_P HELX_P8 AA8 ASP A 113 ? HIS A 133 ? ASP A 113 HIS A 133 1 ? 21 HELX_P HELX_P9 AA9 THR B 3 ? ASN B 17 ? THR B 3 ASN B 17 1 ? 15 HELX_P HELX_P10 AB1 ASN B 17 ? HIS B 33 ? ASN B 17 HIS B 33 1 ? 17 HELX_P HELX_P11 AB2 SER B 45 ? GLY B 70 ? SER B 45 GLY B 70 1 ? 26 HELX_P HELX_P12 AB3 LYS B 72 ? LEU B 90 ? LYS B 72 LEU B 90 1 ? 19 HELX_P HELX_P13 AB4 PRO B 93 ? LEU B 112 ? PRO B 93 LEU B 112 1 ? 20 HELX_P HELX_P14 AB5 ASP B 113 ? HIS B 133 ? ASP B 113 HIS B 133 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 52 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id 9UY _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id CAB _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 52 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 9UY _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.630 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 9UY _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'binding site for residue 9UY A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 47 ? ARG A 47 . ? 1_555 ? 2 AC1 17 ASP A 48 ? ASP A 48 . ? 1_555 ? 3 AC1 17 CYS A 52 ? CYS A 52 . ? 1_555 ? 4 AC1 17 ARG A 54 ? ARG A 54 . ? 1_555 ? 5 AC1 17 ASP A 55 ? ASP A 55 . ? 1_555 ? 6 AC1 17 TRP A 58 ? TRP A 58 . ? 1_555 ? 7 AC1 17 PHE A 59 ? PHE A 59 . ? 1_555 ? 8 AC1 17 SER A 82 ? SER A 82 . ? 1_555 ? 9 AC1 17 MET A 86 ? MET A 86 . ? 1_555 ? 10 AC1 17 SER A 89 ? SER A 89 . ? 1_555 ? 11 AC1 17 ALA A 96 ? ALA A 96 . ? 1_555 ? 12 AC1 17 MET A 97 ? MET A 97 . ? 1_555 ? 13 AC1 17 SER A 100 ? SER A 100 . ? 1_555 ? 14 AC1 17 PHE B 65 ? PHE B 65 . ? 1_555 ? 15 AC1 17 PRO B 74 ? PRO B 74 . ? 1_555 ? 16 AC1 17 SER B 77 ? SER B 77 . ? 1_555 ? 17 AC1 17 ILE B 78 ? ILE B 78 . ? 1_555 ? # _atom_sites.entry_id 6FZN _atom_sites.fract_transf_matrix[1][1] 0.023502 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006316 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017253 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019871 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 HIS 61 61 61 HIS HIS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 MET 86 86 86 MET MET A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 GLY 91 91 ? ? ? A . n A 1 92 VAL 92 92 ? ? ? A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 MET 97 97 97 MET MET A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 CYS 103 103 103 CYS CYS A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 ASP 125 125 125 ASP ASP A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 MET 131 131 131 MET MET A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 HIS 133 133 133 HIS HIS A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 HIS 136 136 136 HIS HIS A . n A 1 137 HIS 137 137 ? ? ? A . n A 1 138 HIS 138 138 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 LYS 2 2 2 LYS LYS B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 ASN 9 9 9 ASN ASN B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 ASN 17 17 17 ASN ASN B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 ASP 23 23 23 ASP ASP B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 GLN 27 27 27 GLN GLN B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 TRP 30 30 30 TRP TRP B . n B 1 31 ARG 31 31 31 ARG ARG B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 HIS 33 33 33 HIS HIS B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 ILE 37 37 37 ILE ILE B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 GLY 41 41 ? ? ? B . n B 1 42 ILE 42 42 ? ? ? B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 PHE 44 44 44 PHE PHE B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 GLN 46 46 46 GLN GLN B . n B 1 47 ARG 47 47 47 ARG ARG B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 ARG 49 49 49 ARG ARG B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 CYS 52 52 52 CYS CYS B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 ASP 55 55 55 ASP ASP B . n B 1 56 ARG 56 56 56 ARG ARG B . n B 1 57 GLY 57 57 57 GLY GLY B . n B 1 58 TRP 58 58 58 TRP TRP B . n B 1 59 PHE 59 59 59 PHE PHE B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 HIS 61 61 61 HIS HIS B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 THR 64 64 64 THR THR B . n B 1 65 PHE 65 65 65 PHE PHE B . n B 1 66 CYS 66 66 66 CYS CYS B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 PRO 74 74 74 PRO PRO B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 GLU 76 76 76 GLU GLU B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 ILE 78 78 78 ILE ILE B . n B 1 79 GLY 79 79 79 GLY GLY B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 SER 82 82 82 SER SER B . n B 1 83 ILE 83 83 83 ILE ILE B . n B 1 84 ARG 84 84 84 ARG ARG B . n B 1 85 GLU 85 85 85 GLU GLU B . n B 1 86 MET 86 86 86 MET MET B . n B 1 87 TYR 87 87 87 TYR TYR B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 PRO 93 93 93 PRO PRO B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 PRO 95 95 95 PRO PRO B . n B 1 96 ALA 96 96 96 ALA ALA B . n B 1 97 MET 97 97 97 MET MET B . n B 1 98 MET 98 98 98 MET MET B . n B 1 99 GLU 99 99 99 GLU GLU B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 ILE 101 101 101 ILE ILE B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 CYS 103 103 103 CYS CYS B . n B 1 104 LEU 104 104 104 LEU LEU B . n B 1 105 LYS 105 105 105 LYS LYS B . n B 1 106 GLU 106 106 106 GLU GLU B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 SER 108 108 108 SER SER B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 SER 110 110 110 SER SER B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 ASP 113 113 113 ASP ASP B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 GLU 115 115 115 GLU GLU B . n B 1 116 ASP 116 116 116 ASP ASP B . n B 1 117 ALA 117 117 117 ALA ALA B . n B 1 118 ASN 118 118 118 ASN ASN B . n B 1 119 GLU 119 119 119 GLU GLU B . n B 1 120 THR 120 120 120 THR THR B . n B 1 121 ALA 121 121 121 ALA ALA B . n B 1 122 PRO 122 122 122 PRO PRO B . n B 1 123 TYR 123 123 123 TYR TYR B . n B 1 124 PHE 124 124 124 PHE PHE B . n B 1 125 ASP 125 125 125 ASP ASP B . n B 1 126 TYR 126 126 126 TYR TYR B . n B 1 127 ILE 127 127 127 ILE ILE B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 LYS 129 129 129 LYS LYS B . n B 1 130 ALA 130 130 130 ALA ALA B . n B 1 131 MET 131 131 131 MET MET B . n B 1 132 SER 132 132 132 SER SER B . n B 1 133 HIS 133 133 133 HIS HIS B . n B 1 134 HIS 134 134 134 HIS HIS B . n B 1 135 HIS 135 135 135 HIS HIS B . n B 1 136 HIS 136 136 ? ? ? B . n B 1 137 HIS 137 137 ? ? ? B . n B 1 138 HIS 138 138 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 9UY 1 201 201 9UY CYC A . D 3 HOH 1 301 38 HOH HOH A . D 3 HOH 2 302 5 HOH HOH A . D 3 HOH 3 303 28 HOH HOH A . D 3 HOH 4 304 34 HOH HOH A . D 3 HOH 5 305 7 HOH HOH A . D 3 HOH 6 306 17 HOH HOH A . D 3 HOH 7 307 30 HOH HOH A . E 3 HOH 1 201 36 HOH HOH B . E 3 HOH 2 202 32 HOH HOH B . E 3 HOH 3 203 20 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2000 ? 1 MORE -14 ? 1 'SSA (A^2)' 13040 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-17 2 'Structure model' 1 1 2018-12-26 3 'Structure model' 1 2 2019-02-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' database_PDB_rev 3 2 'Structure model' database_PDB_rev_record 4 2 'Structure model' pdbx_database_proc 5 3 'Structure model' entity_src_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 6 3 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Auto-Rickshaw ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 134 ? ? -104.90 43.12 2 1 SER B 77 ? ? -79.16 -88.69 3 1 HIS B 134 ? ? -68.93 -70.09 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A PRO 93 ? N ? A PRO 93 N 2 1 Y 1 A PRO 93 ? CA ? A PRO 93 CA 3 1 Y 1 A PRO 93 ? CB ? A PRO 93 CB 4 1 Y 1 A PRO 93 ? CG ? A PRO 93 CG 5 1 Y 1 A PRO 93 ? CD ? A PRO 93 CD 6 1 Y 1 B LYS 2 ? N ? B LYS 2 N 7 1 Y 1 B LYS 2 ? CB ? B LYS 2 CB 8 1 Y 1 B LYS 2 ? CG ? B LYS 2 CG 9 1 Y 1 B LYS 2 ? CD ? B LYS 2 CD 10 1 Y 1 B LYS 2 ? CE ? B LYS 2 CE 11 1 Y 1 B LYS 2 ? NZ ? B LYS 2 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 91 ? A GLY 91 3 1 Y 1 A VAL 92 ? A VAL 92 4 1 Y 1 A HIS 137 ? A HIS 137 5 1 Y 1 A HIS 138 ? A HIS 138 6 1 Y 1 B MET 1 ? B MET 1 7 1 Y 1 B GLY 41 ? B GLY 41 8 1 Y 1 B ILE 42 ? B ILE 42 9 1 Y 1 B HIS 136 ? B HIS 136 10 1 Y 1 B HIS 137 ? B HIS 137 11 1 Y 1 B HIS 138 ? B HIS 138 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid ; 9UY 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? #