HEADER HYDROLASE 26-MAR-18 6G3N TITLE MYCOBACTERIAL HYDROLASE COMPLEX 14. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYCOBACTERIAL HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM HASSIACUM (STRAIN DSM 44199 / CIP SOURCE 3 105218 / JCM 12690 / 3849); SOURCE 4 ORGANISM_TAXID: 1122247; SOURCE 5 GENE: C731_0006; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MYCOBACTERIUM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.B.CEREIJA,S.MACEDO-RIBEIRO,P.J.B.PEREIRA REVDAT 2 17-JAN-24 6G3N 1 REMARK REVDAT 1 10-APR-19 6G3N 0 JRNL AUTH T.B.CEREIJA,S.ALARICO,E.C.LOURENCO,R.VENTURA,N.EMPADINHAS, JRNL AUTH 2 S.MACEDO-RIBEIRO,P.J.B.PEREIRA JRNL TITL STRUCTURAL CHARACTERIZATION OF MYCOBACTERIAL HYDROLASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 52473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2595 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3257 - 6.1842 1.00 2863 119 0.1369 0.1648 REMARK 3 2 6.1842 - 4.9111 1.00 2689 160 0.1419 0.2036 REMARK 3 3 4.9111 - 4.2911 1.00 2666 172 0.1154 0.1578 REMARK 3 4 4.2911 - 3.8991 1.00 2689 120 0.1218 0.1567 REMARK 3 5 3.8991 - 3.6198 1.00 2655 131 0.1301 0.1937 REMARK 3 6 3.6198 - 3.4065 1.00 2609 163 0.1472 0.1876 REMARK 3 7 3.4065 - 3.2359 1.00 2638 137 0.1708 0.2210 REMARK 3 8 3.2359 - 3.0951 1.00 2656 136 0.1676 0.2144 REMARK 3 9 3.0951 - 2.9760 1.00 2609 157 0.1768 0.2445 REMARK 3 10 2.9760 - 2.8733 1.00 2597 144 0.1743 0.2480 REMARK 3 11 2.8733 - 2.7835 1.00 2625 127 0.1824 0.2480 REMARK 3 12 2.7835 - 2.7040 1.00 2664 129 0.1931 0.2526 REMARK 3 13 2.7040 - 2.6328 1.00 2603 128 0.1883 0.2365 REMARK 3 14 2.6328 - 2.5686 1.00 2611 140 0.1970 0.2563 REMARK 3 15 2.5686 - 2.5102 1.00 2576 137 0.1977 0.2502 REMARK 3 16 2.5102 - 2.4568 1.00 2619 125 0.2148 0.2744 REMARK 3 17 2.4568 - 2.4076 1.00 2636 120 0.2340 0.3524 REMARK 3 18 2.4076 - 2.3622 0.99 2576 132 0.2400 0.3540 REMARK 3 19 2.3622 - 2.3200 0.88 2297 118 0.2751 0.3294 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7463 REMARK 3 ANGLE : 0.975 10165 REMARK 3 CHIRALITY : 0.055 1048 REMARK 3 PLANARITY : 0.007 1326 REMARK 3 DIHEDRAL : 19.170 4372 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.6887 15.1855 -31.5616 REMARK 3 T TENSOR REMARK 3 T11: 0.3896 T22: 0.3445 REMARK 3 T33: 0.3205 T12: -0.0651 REMARK 3 T13: 0.0033 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 0.9632 L22: 7.0098 REMARK 3 L33: 5.3205 L12: -0.4316 REMARK 3 L13: 0.0874 L23: 3.6557 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: -0.3490 S13: -0.0660 REMARK 3 S21: 0.7288 S22: 0.0378 S23: -0.0032 REMARK 3 S31: 0.0665 S32: 0.1899 S33: -0.0325 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.6569 30.5678 -36.5786 REMARK 3 T TENSOR REMARK 3 T11: 0.4999 T22: 0.3052 REMARK 3 T33: 0.3801 T12: -0.0387 REMARK 3 T13: 0.0054 T23: -0.0369 REMARK 3 L TENSOR REMARK 3 L11: 1.6248 L22: 1.8723 REMARK 3 L33: 2.3228 L12: 0.0087 REMARK 3 L13: 0.5807 L23: 0.1595 REMARK 3 S TENSOR REMARK 3 S11: -0.0810 S12: -0.1411 S13: 0.2763 REMARK 3 S21: 0.2981 S22: -0.0439 S23: -0.1431 REMARK 3 S31: -0.5191 S32: 0.1006 S33: 0.1426 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1834 21.7536 -51.2523 REMARK 3 T TENSOR REMARK 3 T11: 0.3053 T22: 0.3426 REMARK 3 T33: 0.3952 T12: -0.0773 REMARK 3 T13: 0.0514 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 2.5598 L22: 2.8188 REMARK 3 L33: 3.2200 L12: -0.3294 REMARK 3 L13: 1.1569 L23: -0.7014 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: 0.1209 S13: 0.0937 REMARK 3 S21: -0.0400 S22: -0.0623 S23: -0.4474 REMARK 3 S31: -0.2721 S32: 0.4568 S33: 0.0090 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.5535 11.7324 -87.0618 REMARK 3 T TENSOR REMARK 3 T11: 0.5039 T22: 0.5819 REMARK 3 T33: 0.3554 T12: 0.1392 REMARK 3 T13: 0.0351 T23: -0.0726 REMARK 3 L TENSOR REMARK 3 L11: 2.8696 L22: 4.1897 REMARK 3 L33: 5.8970 L12: -2.2655 REMARK 3 L13: 2.5835 L23: -2.4746 REMARK 3 S TENSOR REMARK 3 S11: 0.2638 S12: 0.5500 S13: -0.0943 REMARK 3 S21: -0.7545 S22: -0.2803 S23: 0.1522 REMARK 3 S31: 0.1528 S32: -0.2184 S33: 0.0232 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.4357 24.3690 -81.9850 REMARK 3 T TENSOR REMARK 3 T11: 0.5955 T22: 0.5677 REMARK 3 T33: 0.4253 T12: 0.1997 REMARK 3 T13: -0.0546 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 2.2570 L22: 1.9022 REMARK 3 L33: 2.0248 L12: -0.3501 REMARK 3 L13: 0.0159 L23: 0.1688 REMARK 3 S TENSOR REMARK 3 S11: 0.1411 S12: 0.4739 S13: 0.0896 REMARK 3 S21: -0.4615 S22: -0.1991 S23: 0.4111 REMARK 3 S31: -0.4413 S32: -0.3902 S33: 0.0796 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 321 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.1306 11.6344 -67.3000 REMARK 3 T TENSOR REMARK 3 T11: 0.2824 T22: 0.3909 REMARK 3 T33: 0.3808 T12: 0.0690 REMARK 3 T13: -0.0512 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.7864 L22: 4.2371 REMARK 3 L33: 2.9714 L12: -0.0356 REMARK 3 L13: -0.1138 L23: 1.6710 REMARK 3 S TENSOR REMARK 3 S11: 0.1410 S12: 0.1840 S13: -0.2105 REMARK 3 S21: -0.0191 S22: -0.1588 S23: 0.3692 REMARK 3 S31: 0.1022 S32: -0.2864 S33: 0.0053 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6G3N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009357. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96770 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52533 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320 REMARK 200 RESOLUTION RANGE LOW (A) : 48.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 1.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5OHZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-BICINE PH 8.5, AMINO ACIDS, PEG REMARK 280 4000, GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.79250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 79.41750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.79250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 79.41750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -85.58500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 728 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 37 33.77 -82.61 REMARK 500 SER A 55 108.81 -160.20 REMARK 500 THR A 114 -169.60 -119.11 REMARK 500 LYS A 198 85.68 -68.03 REMARK 500 GLU A 201 153.51 -48.18 REMARK 500 GLU A 319 65.81 -112.30 REMARK 500 PHE A 349 -105.49 -133.80 REMARK 500 TYR A 375 -107.60 61.89 REMARK 500 PRO B 37 33.35 -81.93 REMARK 500 SER B 55 106.27 -163.94 REMARK 500 THR B 114 -168.18 -110.07 REMARK 500 GLU B 319 68.41 -117.37 REMARK 500 PHE B 349 -110.64 -140.54 REMARK 500 TYR B 375 -103.08 65.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SER A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SER B 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5OIV RELATED DB: PDB REMARK 900 RELATED ID: 5OHC RELATED DB: PDB REMARK 900 RELATED ID: 5OHZ RELATED DB: PDB REMARK 900 RELATED ID: 5OIW RELATED DB: PDB REMARK 900 RELATED ID: 5OJV RELATED DB: PDB REMARK 900 RELATED ID: 5OJU RELATED DB: PDB REMARK 900 RELATED ID: 5OIE RELATED DB: PDB REMARK 900 RELATED ID: 5OI1 RELATED DB: PDB REMARK 900 RELATED ID: 5OJ4 RELATED DB: PDB REMARK 900 RELATED ID: 5OI0 RELATED DB: PDB REMARK 900 RELATED ID: 5ONZ RELATED DB: PDB REMARK 900 RELATED ID: 5ONT RELATED DB: PDB REMARK 900 RELATED ID: 5OO2 RELATED DB: PDB DBREF 6G3N A 1 446 UNP K5BDL0 K5BDL0_MYCHD 1 446 DBREF 6G3N B 1 446 UNP K5BDL0 K5BDL0_MYCHD 1 446 SEQADV 6G3N GLY A -1 UNP K5BDL0 EXPRESSION TAG SEQADV 6G3N ALA A 0 UNP K5BDL0 EXPRESSION TAG SEQADV 6G3N PHE A 434 UNP K5BDL0 GLN 434 ENGINEERED MUTATION SEQADV 6G3N GLY B -1 UNP K5BDL0 EXPRESSION TAG SEQADV 6G3N ALA B 0 UNP K5BDL0 EXPRESSION TAG SEQADV 6G3N PHE B 434 UNP K5BDL0 GLN 434 ENGINEERED MUTATION SEQRES 1 A 448 GLY ALA MET PRO HIS ASP PRO SER PHE THR PRO THR GLN SEQRES 2 A 448 LEU ALA ALA ARG ALA ALA TYR LEU LEU ARG GLY ASN ASP SEQRES 3 A 448 LEU GLY THR MET THR THR ALA ALA PRO LEU LEU TYR PRO SEQRES 4 A 448 HIS MET TRP SER TRP ASP ALA ALA PHE VAL ALA ILE GLY SEQRES 5 A 448 LEU ALA PRO LEU SER VAL GLU ARG ALA VAL VAL GLU LEU SEQRES 6 A 448 ASP THR LEU LEU SER ALA GLN TRP ARG ASN GLY MET ILE SEQRES 7 A 448 PRO HIS ILE VAL PHE ALA ASN GLY VAL ASP GLY TYR PHE SEQRES 8 A 448 PRO GLY PRO ALA ARG TRP ALA THR ALA THR LEU ALA ASP SEQRES 9 A 448 ASN ALA PRO ARG ASN ARG LEU THR SER GLY ILE THR GLN SEQRES 10 A 448 PRO PRO VAL HIS ALA ILE ALA VAL GLN ARG ILE LEU GLU SEQRES 11 A 448 HIS ALA ARG THR ARG GLY ARG SER THR ARG ALA VAL ALA SEQRES 12 A 448 GLU ALA PHE LEU ASP ARG ARG TRP GLY ASP LEU MET ARG SEQRES 13 A 448 TRP HIS ARG TRP LEU ALA GLU CYS ARG ASP ARG ASN GLU SEQRES 14 A 448 ARG GLY ARG ILE THR LEU TYR HIS GLY TRP GLU SER GLY SEQRES 15 A 448 MET ASP ASN SER PRO ARG TRP ASP SER ALA TYR ALA ASN SEQRES 16 A 448 VAL VAL PRO GLY LYS LEU PRO GLU TYR GLN ARG ALA ASP SEQRES 17 A 448 ASN VAL ILE ILE THR ASP PRO SER GLN ARG PRO SER ASP SEQRES 18 A 448 GLY GLU TYR ASP ARG TYR LEU TRP LEU LEU GLU GLU MET SEQRES 19 A 448 LYS ALA VAL ARG TYR ASP ASP GLU ARG LEU PRO SER VAL SEQRES 20 A 448 MET SER PHE GLN VAL GLU ASP VAL PHE PHE SER ALA ILE SEQRES 21 A 448 PHE SER VAL ALA CYS GLN VAL LEU ALA GLU ILE GLY GLU SEQRES 22 A 448 ASP TYR LYS ARG PRO HIS ALA ASP VAL LYS ASP LEU TYR SEQRES 23 A 448 LEU TRP ALA GLU ARG PHE ARG ALA GLY VAL VAL GLU THR SEQRES 24 A 448 THR ASP GLN ARG THR GLY ALA ALA ARG ASP PHE ASP VAL SEQRES 25 A 448 LEU ALA GLU LYS TRP LEU VAL THR GLU THR ALA ALA GLN SEQRES 26 A 448 PHE ALA PRO LEU LEU CYS GLY GLY LEU PRO HIS ASP ARG SEQRES 27 A 448 GLU ARG ALA LEU LEU LYS LEU LEU GLU GLY PRO ARG PHE SEQRES 28 A 448 CYS GLY HIS PRO ASP LEU LYS TYR GLY LEU ILE PRO SER SEQRES 29 A 448 THR SER PRO VAL SER ARG ASP PHE ARG PRO ARG GLU TYR SEQRES 30 A 448 TRP ARG GLY PRO VAL TRP PRO VAL LEU THR TRP LEU PHE SEQRES 31 A 448 SER TRP CYS PHE ALA ARG ARG GLY TRP ALA GLU ARG ALA SEQRES 32 A 448 ARG LEU LEU ARG GLN GLU GLY LEU ARG GLN ALA SER ASP SEQRES 33 A 448 GLY SER PHE ALA GLU TYR TYR GLU PRO PHE THR GLY GLU SEQRES 34 A 448 PRO LEU GLY SER MET GLN PHE SER TRP THR ALA ALA ALA SEQRES 35 A 448 VAL LEU ASP TRP LEU GLY SEQRES 1 B 448 GLY ALA MET PRO HIS ASP PRO SER PHE THR PRO THR GLN SEQRES 2 B 448 LEU ALA ALA ARG ALA ALA TYR LEU LEU ARG GLY ASN ASP SEQRES 3 B 448 LEU GLY THR MET THR THR ALA ALA PRO LEU LEU TYR PRO SEQRES 4 B 448 HIS MET TRP SER TRP ASP ALA ALA PHE VAL ALA ILE GLY SEQRES 5 B 448 LEU ALA PRO LEU SER VAL GLU ARG ALA VAL VAL GLU LEU SEQRES 6 B 448 ASP THR LEU LEU SER ALA GLN TRP ARG ASN GLY MET ILE SEQRES 7 B 448 PRO HIS ILE VAL PHE ALA ASN GLY VAL ASP GLY TYR PHE SEQRES 8 B 448 PRO GLY PRO ALA ARG TRP ALA THR ALA THR LEU ALA ASP SEQRES 9 B 448 ASN ALA PRO ARG ASN ARG LEU THR SER GLY ILE THR GLN SEQRES 10 B 448 PRO PRO VAL HIS ALA ILE ALA VAL GLN ARG ILE LEU GLU SEQRES 11 B 448 HIS ALA ARG THR ARG GLY ARG SER THR ARG ALA VAL ALA SEQRES 12 B 448 GLU ALA PHE LEU ASP ARG ARG TRP GLY ASP LEU MET ARG SEQRES 13 B 448 TRP HIS ARG TRP LEU ALA GLU CYS ARG ASP ARG ASN GLU SEQRES 14 B 448 ARG GLY ARG ILE THR LEU TYR HIS GLY TRP GLU SER GLY SEQRES 15 B 448 MET ASP ASN SER PRO ARG TRP ASP SER ALA TYR ALA ASN SEQRES 16 B 448 VAL VAL PRO GLY LYS LEU PRO GLU TYR GLN ARG ALA ASP SEQRES 17 B 448 ASN VAL ILE ILE THR ASP PRO SER GLN ARG PRO SER ASP SEQRES 18 B 448 GLY GLU TYR ASP ARG TYR LEU TRP LEU LEU GLU GLU MET SEQRES 19 B 448 LYS ALA VAL ARG TYR ASP ASP GLU ARG LEU PRO SER VAL SEQRES 20 B 448 MET SER PHE GLN VAL GLU ASP VAL PHE PHE SER ALA ILE SEQRES 21 B 448 PHE SER VAL ALA CYS GLN VAL LEU ALA GLU ILE GLY GLU SEQRES 22 B 448 ASP TYR LYS ARG PRO HIS ALA ASP VAL LYS ASP LEU TYR SEQRES 23 B 448 LEU TRP ALA GLU ARG PHE ARG ALA GLY VAL VAL GLU THR SEQRES 24 B 448 THR ASP GLN ARG THR GLY ALA ALA ARG ASP PHE ASP VAL SEQRES 25 B 448 LEU ALA GLU LYS TRP LEU VAL THR GLU THR ALA ALA GLN SEQRES 26 B 448 PHE ALA PRO LEU LEU CYS GLY GLY LEU PRO HIS ASP ARG SEQRES 27 B 448 GLU ARG ALA LEU LEU LYS LEU LEU GLU GLY PRO ARG PHE SEQRES 28 B 448 CYS GLY HIS PRO ASP LEU LYS TYR GLY LEU ILE PRO SER SEQRES 29 B 448 THR SER PRO VAL SER ARG ASP PHE ARG PRO ARG GLU TYR SEQRES 30 B 448 TRP ARG GLY PRO VAL TRP PRO VAL LEU THR TRP LEU PHE SEQRES 31 B 448 SER TRP CYS PHE ALA ARG ARG GLY TRP ALA GLU ARG ALA SEQRES 32 B 448 ARG LEU LEU ARG GLN GLU GLY LEU ARG GLN ALA SER ASP SEQRES 33 B 448 GLY SER PHE ALA GLU TYR TYR GLU PRO PHE THR GLY GLU SEQRES 34 B 448 PRO LEU GLY SER MET GLN PHE SER TRP THR ALA ALA ALA SEQRES 35 B 448 VAL LEU ASP TRP LEU GLY HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET SER A 505 7 HET GOL B 501 6 HET GOL B 502 6 HET GOL B 503 6 HET SER B 504 7 HETNAM GOL GLYCEROL HETNAM SER SERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 7(C3 H8 O3) FORMUL 7 SER 2(C3 H7 N O3) FORMUL 12 HOH *255(H2 O) HELIX 1 AA1 THR A 8 ASN A 23 1 16 HELIX 2 AA2 SER A 41 ALA A 52 1 12 HELIX 3 AA3 SER A 55 ALA A 69 1 15 HELIX 4 AA4 GLY A 91 ALA A 96 1 6 HELIX 5 AA5 ALA A 96 ALA A 101 1 6 HELIX 6 AA6 VAL A 118 THR A 132 1 15 HELIX 7 AA7 GLY A 134 ARG A 163 1 30 HELIX 8 AA8 HIS A 175 GLY A 180 5 6 HELIX 9 AA9 SER A 184 ARG A 186 5 3 HELIX 10 AB1 TRP A 187 ALA A 192 1 6 HELIX 11 AB2 ALA A 205 ILE A 210 1 6 HELIX 12 AB3 ASP A 212 ARG A 216 5 5 HELIX 13 AB4 SER A 218 ALA A 234 1 17 HELIX 14 AB5 ARG A 241 MET A 246 1 6 HELIX 15 AB6 VAL A 253 TYR A 273 1 21 HELIX 16 AB7 PRO A 276 GLU A 296 1 21 HELIX 17 AB8 THR A 320 GLN A 323 5 4 HELIX 18 AB9 PHE A 324 GLY A 330 1 7 HELIX 19 AC1 PRO A 333 GLY A 346 1 14 HELIX 20 AC2 TRP A 381 GLY A 396 1 16 HELIX 21 AC3 TRP A 397 SER A 413 1 17 HELIX 22 AC4 PHE A 434 GLY A 446 1 13 HELIX 23 AC5 THR B 8 ASN B 23 1 16 HELIX 24 AC6 SER B 41 ALA B 52 1 12 HELIX 25 AC7 SER B 55 SER B 68 1 14 HELIX 26 AC8 GLY B 91 ALA B 96 1 6 HELIX 27 AC9 ALA B 96 ALA B 101 1 6 HELIX 28 AD1 VAL B 118 ARG B 133 1 16 HELIX 29 AD2 GLY B 134 ARG B 163 1 30 HELIX 30 AD3 HIS B 175 GLY B 180 5 6 HELIX 31 AD4 SER B 184 ARG B 186 5 3 HELIX 32 AD5 TRP B 187 ALA B 192 1 6 HELIX 33 AD6 ALA B 205 ILE B 210 1 6 HELIX 34 AD7 ASP B 212 ARG B 216 5 5 HELIX 35 AD8 SER B 218 VAL B 235 1 18 HELIX 36 AD9 ARG B 241 VAL B 245 5 5 HELIX 37 AE1 VAL B 253 TYR B 273 1 21 HELIX 38 AE2 PRO B 276 THR B 297 1 22 HELIX 39 AE3 THR B 320 GLN B 323 5 4 HELIX 40 AE4 PHE B 324 GLY B 330 1 7 HELIX 41 AE5 PRO B 333 GLY B 346 1 14 HELIX 42 AE6 TRP B 381 GLY B 396 1 16 HELIX 43 AE7 TRP B 397 SER B 413 1 17 HELIX 44 AE8 PHE B 434 LEU B 445 1 12 SHEET 1 AA1 2 MET A 39 TRP A 40 0 SHEET 2 AA1 2 ILE A 79 VAL A 80 -1 O VAL A 80 N MET A 39 SHEET 1 AA2 4 ILE A 171 LEU A 173 0 SHEET 2 AA2 4 VAL A 250 ASP A 252 -1 O VAL A 250 N LEU A 173 SHEET 3 AA2 4 ASP A 307 ASP A 309 -1 O PHE A 308 N GLU A 251 SHEET 4 AA2 4 LYS A 314 LEU A 316 -1 O LYS A 314 N ASP A 309 SHEET 1 AA3 2 TYR A 420 TYR A 421 0 SHEET 2 AA3 2 PRO A 428 LEU A 429 -1 O LEU A 429 N TYR A 420 SHEET 1 AA4 3 MET B 39 TRP B 40 0 SHEET 2 AA4 3 ILE B 79 PHE B 81 -1 O VAL B 80 N MET B 39 SHEET 3 AA4 3 LEU B 109 THR B 110 -1 O LEU B 109 N PHE B 81 SHEET 1 AA5 4 ILE B 171 LEU B 173 0 SHEET 2 AA5 4 VAL B 250 ASP B 252 -1 O VAL B 250 N LEU B 173 SHEET 3 AA5 4 ASP B 307 ASP B 309 -1 O PHE B 308 N GLU B 251 SHEET 4 AA5 4 LYS B 314 LEU B 316 -1 O LYS B 314 N ASP B 309 SHEET 1 AA6 2 TYR B 420 TYR B 421 0 SHEET 2 AA6 2 PRO B 428 LEU B 429 -1 O LEU B 429 N TYR B 420 CISPEP 1 PHE A 89 PRO A 90 0 9.54 CISPEP 2 PHE B 89 PRO B 90 0 7.41 SITE 1 AC1 3 ARG A 154 ARG A 157 ASP A 279 SITE 1 AC2 4 THR A 297 THR A 298 ARG A 306 TRP A 315 SITE 1 AC3 8 TYR A 36 TRP A 40 TRP A 42 ASP A 43 SITE 2 AC3 8 GLN A 115 GLU A 419 PHE A 434 SER A 505 SITE 1 AC4 6 GLU A 399 ARG A 402 GLN B 11 ARG B 125 SITE 2 AC4 6 HIS B 129 GLY B 446 SITE 1 AC5 8 TRP A 40 HIS A 78 TYR A 88 ASP A 182 SITE 2 AC5 8 ARG A 216 TYR A 222 TYR A 375 GOL A 503 SITE 1 AC6 5 GLN A 11 ARG A 125 HIS A 129 GLU B 399 SITE 2 AC6 5 ARG B 402 SITE 1 AC7 8 TYR B 36 TRP B 40 TRP B 42 ASP B 43 SITE 2 AC7 8 GLN B 115 GLU B 419 PHE B 434 SER B 504 SITE 1 AC8 5 GLU B 296 THR B 297 THR B 298 GLN B 300 SITE 2 AC8 5 ARG B 306 SITE 1 AC9 8 TYR B 36 TRP B 40 HIS B 78 TYR B 88 SITE 2 AC9 8 ASP B 182 ARG B 216 TYR B 375 GOL B 502 CRYST1 85.585 158.835 88.274 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011684 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011328 0.00000