HEADER HYDROLASE 28-MAR-18 6G4O TITLE NON-AGED FORM OF TORPEDO CALIFORNICA ACETYLCHOLINESTERASE INHIBITED BY TITLE 2 TABUN ANALOG NEDPA BOUND TO UNCHARGED REACTIVATOR 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLCHOLINESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ACHE; COMPND 5 EC: 3.1.1.7 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TETRONARCE CALIFORNICA; SOURCE 3 ORGANISM_COMMON: PACIFIC ELECTRIC RAY; SOURCE 4 ORGANISM_TAXID: 7787 KEYWDS ACETYLCHOLINESTERASE, TABUN, NERVE AGENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.SANTONI,E.DE LA MORA,J.DE SOUZA,I.SILMAN,J.SUSSMAN,R.BAATI,M.WEIK, AUTHOR 2 F.NACHON REVDAT 6 23-OCT-24 6G4O 1 REMARK REVDAT 5 17-JAN-24 6G4O 1 HETSYN REVDAT 4 29-JUL-20 6G4O 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 01-MAY-19 6G4O 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQRES HELIX SHEET SSBOND REVDAT 3 3 1 LINK SITE ATOM REVDAT 2 26-SEP-18 6G4O 1 JRNL REVDAT 1 29-AUG-18 6G4O 0 JRNL AUTH G.SANTONI,J.DE SOUSA,E.DE LA MORA,J.DIAS,L.JEAN,J.L.SUSSMAN, JRNL AUTH 2 I.SILMAN,P.Y.RENARD,R.C.D.BROWN,M.WEIK,R.BAATI,F.NACHON JRNL TITL STRUCTURE-BASED OPTIMIZATION OF NONQUATERNARY REACTIVATORS JRNL TITL 2 OF ACETYLCHOLINESTERASE INHIBITED BY ORGANOPHOSPHORUS NERVE JRNL TITL 3 AGENTS. JRNL REF J. MED. CHEM. V. 61 7630 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 30125110 JRNL DOI 10.1021/ACS.JMEDCHEM.8B00592 REMARK 2 REMARK 2 RESOLUTION. 2.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 37171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1863 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9872 - 6.5310 0.98 2875 154 0.1895 0.2312 REMARK 3 2 6.5310 - 5.1861 0.99 2769 161 0.1720 0.2297 REMARK 3 3 5.1861 - 4.5312 0.98 2744 141 0.1406 0.2175 REMARK 3 4 4.5312 - 4.1172 0.98 2698 141 0.1479 0.2318 REMARK 3 5 4.1172 - 3.8223 0.98 2680 150 0.1573 0.2350 REMARK 3 6 3.8223 - 3.5970 0.99 2716 144 0.1774 0.2631 REMARK 3 7 3.5970 - 3.4169 0.99 2709 129 0.1908 0.2841 REMARK 3 8 3.4169 - 3.2682 0.99 2712 137 0.2123 0.3292 REMARK 3 9 3.2682 - 3.1424 0.98 2678 149 0.2283 0.3466 REMARK 3 10 3.1424 - 3.0340 0.99 2669 149 0.2323 0.3020 REMARK 3 11 3.0340 - 2.9392 0.99 2696 130 0.2445 0.3328 REMARK 3 12 2.9392 - 2.8552 0.99 2694 137 0.2616 0.3791 REMARK 3 13 2.8552 - 2.7800 0.98 2668 141 0.2771 0.3381 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8872 REMARK 3 ANGLE : 1.087 12047 REMARK 3 CHIRALITY : 0.061 1263 REMARK 3 PLANARITY : 0.008 1555 REMARK 3 DIHEDRAL : 19.511 5212 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): -6.2853 -2.4775 -6.3288 REMARK 3 T TENSOR REMARK 3 T11: 0.2580 T22: 0.4192 REMARK 3 T33: 0.2943 T12: 0.0341 REMARK 3 T13: 0.0090 T23: 0.0455 REMARK 3 L TENSOR REMARK 3 L11: 2.4323 L22: 1.0790 REMARK 3 L33: 1.4304 L12: -0.5781 REMARK 3 L13: 0.5012 L23: -0.2195 REMARK 3 S TENSOR REMARK 3 S11: -0.1313 S12: -0.0062 S13: 0.3447 REMARK 3 S21: 0.0434 S22: 0.0373 S23: -0.0641 REMARK 3 S31: -0.1085 S32: -0.0840 S33: 0.0935 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): 6.6246 -1.8731 53.6768 REMARK 3 T TENSOR REMARK 3 T11: 0.2253 T22: 0.4471 REMARK 3 T33: 0.2506 T12: -0.0067 REMARK 3 T13: 0.0015 T23: -0.0439 REMARK 3 L TENSOR REMARK 3 L11: 0.7518 L22: 1.1491 REMARK 3 L33: 1.4177 L12: -0.2832 REMARK 3 L13: 0.1851 L23: 0.1315 REMARK 3 S TENSOR REMARK 3 S11: 0.0236 S12: 0.1138 S13: -0.0529 REMARK 3 S21: -0.0217 S22: -0.0596 S23: -0.0112 REMARK 3 S31: 0.1509 S32: -0.0767 S33: 0.0407 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6G4O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37192 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.780 REMARK 200 RESOLUTION RANGE LOW (A) : 45.981 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1EA5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150MM MES 36% PEG 200, PH 5.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.77150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.26650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.17550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.26650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.77150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.17550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ASP A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 486 REMARK 465 SER A 487 REMARK 465 GLN A 488 REMARK 465 GLU A 489 REMARK 465 ALA A 536 REMARK 465 CYS A 537 REMARK 465 ASP B 1 REMARK 465 ASP B 2 REMARK 465 HIS B 3 REMARK 465 ALA B 536 REMARK 465 CYS B 537 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TRP B 473 O HOH B 701 1.99 REMARK 500 OD1 ASP B 397 NH1 ARG B 517 2.00 REMARK 500 O SER B 125 O HOH B 702 2.00 REMARK 500 OD1 ASN A 310 NZ LYS A 410 2.03 REMARK 500 O PHE A 339 O HOH A 701 2.06 REMARK 500 O SER B 487 NZ LYS B 491 2.13 REMARK 500 O HOH B 817 O HOH B 822 2.14 REMARK 500 NH1 ARG B 515 O HOH B 703 2.14 REMARK 500 N SER A 108 O HOH A 702 2.17 REMARK 500 O VAL B 293 O HOH B 704 2.18 REMARK 500 OE2 GLU A 463 NH1 ARG A 467 2.18 REMARK 500 OD1 ASP A 369 NZ LYS B 530 2.18 REMARK 500 ND2 ASN B 324 OE1 GLU B 443 2.19 REMARK 500 OE2 GLU A 37 N LYS A 52 2.19 REMARK 500 O PRO B 229 O HOH B 705 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O VAL A 71 NZ LYS B 192 2554 2.12 REMARK 500 NZ LYS A 192 OE1 GLU B 73 2454 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 -159.82 -134.54 REMARK 500 ASN A 59 97.71 -59.45 REMARK 500 ALA A 60 62.38 -109.70 REMARK 500 SER A 108 79.30 48.62 REMARK 500 PHE A 120 12.78 58.56 REMARK 500 PHE A 155 22.09 -141.59 REMARK 500 ASN A 167 9.04 58.73 REMARK 500 SER A 200 -113.77 60.36 REMARK 500 ASN A 251 0.92 -69.42 REMARK 500 ASN A 253 73.76 51.89 REMARK 500 SER A 258 -143.41 -153.48 REMARK 500 ASN A 280 10.25 -69.98 REMARK 500 SER A 286 -57.98 59.81 REMARK 500 ILE A 287 -28.38 68.95 REMARK 500 GLU A 299 -45.78 -145.71 REMARK 500 THR A 317 -145.83 -147.05 REMARK 500 PRO A 361 -49.15 -24.30 REMARK 500 ASP A 380 59.56 -155.28 REMARK 500 VAL A 400 -75.37 -135.96 REMARK 500 ARG A 515 84.34 54.21 REMARK 500 GLN A 526 -50.11 -120.21 REMARK 500 VAL B 22 119.52 -171.80 REMARK 500 PHE B 45 -3.41 78.41 REMARK 500 ALA B 60 49.48 -107.44 REMARK 500 SER B 91 143.46 -176.75 REMARK 500 ASP B 93 89.27 -65.17 REMARK 500 CYS B 94 -2.38 -143.98 REMARK 500 PRO B 106 -178.23 -64.30 REMARK 500 ASP B 128 -32.48 -37.06 REMARK 500 LEU B 146 -165.45 -110.11 REMARK 500 SER B 200 -118.27 67.40 REMARK 500 CYS B 231 150.18 -37.99 REMARK 500 GLU B 299 -70.21 -118.95 REMARK 500 THR B 317 -145.77 -150.22 REMARK 500 ASP B 326 65.24 -103.02 REMARK 500 VAL B 360 66.62 -117.49 REMARK 500 ASP B 380 60.99 -170.03 REMARK 500 VAL B 400 -58.17 -134.89 REMARK 500 ASN B 457 63.04 61.68 REMARK 500 PRO B 485 171.68 -58.85 REMARK 500 HIS B 486 -49.97 76.83 REMARK 500 ASN B 506 -166.78 -163.43 REMARK 500 ARG B 515 88.13 54.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 286 ILE B 287 149.70 REMARK 500 LYS B 498 GLU B 499 127.30 REMARK 500 REMARK 500 REMARK: NULL DBREF 6G4O A 1 537 UNP P04058 ACES_TETCF 22 558 DBREF 6G4O B 1 537 UNP P04058 ACES_TETCF 22 558 SEQRES 1 A 537 ASP ASP HIS SER GLU LEU LEU VAL ASN THR LYS SER GLY SEQRES 2 A 537 LYS VAL MET GLY THR ARG VAL PRO VAL LEU SER SER HIS SEQRES 3 A 537 ILE SER ALA PHE LEU GLY ILE PRO PHE ALA GLU PRO PRO SEQRES 4 A 537 VAL GLY ASN MET ARG PHE ARG ARG PRO GLU PRO LYS LYS SEQRES 5 A 537 PRO TRP SER GLY VAL TRP ASN ALA SER THR TYR PRO ASN SEQRES 6 A 537 ASN CYS GLN GLN TYR VAL ASP GLU GLN PHE PRO GLY PHE SEQRES 7 A 537 SER GLY SER GLU MET TRP ASN PRO ASN ARG GLU MET SER SEQRES 8 A 537 GLU ASP CYS LEU TYR LEU ASN ILE TRP VAL PRO SER PRO SEQRES 9 A 537 ARG PRO LYS SER THR THR VAL MET VAL TRP ILE TYR GLY SEQRES 10 A 537 GLY GLY PHE TYR SER GLY SER SER THR LEU ASP VAL TYR SEQRES 11 A 537 ASN GLY LYS TYR LEU ALA TYR THR GLU GLU VAL VAL LEU SEQRES 12 A 537 VAL SER LEU SER TYR ARG VAL GLY ALA PHE GLY PHE LEU SEQRES 13 A 537 ALA LEU HIS GLY SER GLN GLU ALA PRO GLY ASN VAL GLY SEQRES 14 A 537 LEU LEU ASP GLN ARG MET ALA LEU GLN TRP VAL HIS ASP SEQRES 15 A 537 ASN ILE GLN PHE PHE GLY GLY ASP PRO LYS THR VAL THR SEQRES 16 A 537 ILE PHE GLY GLU SER ALA GLY GLY ALA SER VAL GLY MET SEQRES 17 A 537 HIS ILE LEU SER PRO GLY SER ARG ASP LEU PHE ARG ARG SEQRES 18 A 537 ALA ILE LEU GLN SER GLY SER PRO ASN CYS PRO TRP ALA SEQRES 19 A 537 SER VAL SER VAL ALA GLU GLY ARG ARG ARG ALA VAL GLU SEQRES 20 A 537 LEU GLY ARG ASN LEU ASN CYS ASN LEU ASN SER ASP GLU SEQRES 21 A 537 GLU LEU ILE HIS CYS LEU ARG GLU LYS LYS PRO GLN GLU SEQRES 22 A 537 LEU ILE ASP VAL GLU TRP ASN VAL LEU PRO PHE ASP SER SEQRES 23 A 537 ILE PHE ARG PHE SER PHE VAL PRO VAL ILE ASP GLY GLU SEQRES 24 A 537 PHE PHE PRO THR SER LEU GLU SER MET LEU ASN SER GLY SEQRES 25 A 537 ASN PHE LYS LYS THR GLN ILE LEU LEU GLY VAL ASN LYS SEQRES 26 A 537 ASP GLU GLY SER PHE PHE LEU LEU TYR GLY ALA PRO GLY SEQRES 27 A 537 PHE SER LYS ASP SER GLU SER LYS ILE SER ARG GLU ASP SEQRES 28 A 537 PHE MET SER GLY VAL LYS LEU SER VAL PRO HIS ALA ASN SEQRES 29 A 537 ASP LEU GLY LEU ASP ALA VAL THR LEU GLN TYR THR ASP SEQRES 30 A 537 TRP MET ASP ASP ASN ASN GLY ILE LYS ASN ARG ASP GLY SEQRES 31 A 537 LEU ASP ASP ILE VAL GLY ASP HIS ASN VAL ILE CYS PRO SEQRES 32 A 537 LEU MET HIS PHE VAL ASN LYS TYR THR LYS PHE GLY ASN SEQRES 33 A 537 GLY THR TYR LEU TYR PHE PHE ASN HIS ARG ALA SER ASN SEQRES 34 A 537 LEU VAL TRP PRO GLU TRP MET GLY VAL ILE HIS GLY TYR SEQRES 35 A 537 GLU ILE GLU PHE VAL PHE GLY LEU PRO LEU VAL LYS GLU SEQRES 36 A 537 LEU ASN TYR THR ALA GLU GLU GLU ALA LEU SER ARG ARG SEQRES 37 A 537 ILE MET HIS TYR TRP ALA THR PHE ALA LYS THR GLY ASN SEQRES 38 A 537 PRO ASN GLU PRO HIS SER GLN GLU SER LYS TRP PRO LEU SEQRES 39 A 537 PHE THR THR LYS GLU GLN LYS PHE ILE ASP LEU ASN THR SEQRES 40 A 537 GLU PRO MET LYS VAL HIS GLN ARG LEU ARG VAL GLN MET SEQRES 41 A 537 CYS VAL PHE TRP ASN GLN PHE LEU PRO LYS LEU LEU ASN SEQRES 42 A 537 ALA THR ALA CYS SEQRES 1 B 537 ASP ASP HIS SER GLU LEU LEU VAL ASN THR LYS SER GLY SEQRES 2 B 537 LYS VAL MET GLY THR ARG VAL PRO VAL LEU SER SER HIS SEQRES 3 B 537 ILE SER ALA PHE LEU GLY ILE PRO PHE ALA GLU PRO PRO SEQRES 4 B 537 VAL GLY ASN MET ARG PHE ARG ARG PRO GLU PRO LYS LYS SEQRES 5 B 537 PRO TRP SER GLY VAL TRP ASN ALA SER THR TYR PRO ASN SEQRES 6 B 537 ASN CYS GLN GLN TYR VAL ASP GLU GLN PHE PRO GLY PHE SEQRES 7 B 537 SER GLY SER GLU MET TRP ASN PRO ASN ARG GLU MET SER SEQRES 8 B 537 GLU ASP CYS LEU TYR LEU ASN ILE TRP VAL PRO SER PRO SEQRES 9 B 537 ARG PRO LYS SER THR THR VAL MET VAL TRP ILE TYR GLY SEQRES 10 B 537 GLY GLY PHE TYR SER GLY SER SER THR LEU ASP VAL TYR SEQRES 11 B 537 ASN GLY LYS TYR LEU ALA TYR THR GLU GLU VAL VAL LEU SEQRES 12 B 537 VAL SER LEU SER TYR ARG VAL GLY ALA PHE GLY PHE LEU SEQRES 13 B 537 ALA LEU HIS GLY SER GLN GLU ALA PRO GLY ASN VAL GLY SEQRES 14 B 537 LEU LEU ASP GLN ARG MET ALA LEU GLN TRP VAL HIS ASP SEQRES 15 B 537 ASN ILE GLN PHE PHE GLY GLY ASP PRO LYS THR VAL THR SEQRES 16 B 537 ILE PHE GLY GLU SER ALA GLY GLY ALA SER VAL GLY MET SEQRES 17 B 537 HIS ILE LEU SER PRO GLY SER ARG ASP LEU PHE ARG ARG SEQRES 18 B 537 ALA ILE LEU GLN SER GLY SER PRO ASN CYS PRO TRP ALA SEQRES 19 B 537 SER VAL SER VAL ALA GLU GLY ARG ARG ARG ALA VAL GLU SEQRES 20 B 537 LEU GLY ARG ASN LEU ASN CYS ASN LEU ASN SER ASP GLU SEQRES 21 B 537 GLU LEU ILE HIS CYS LEU ARG GLU LYS LYS PRO GLN GLU SEQRES 22 B 537 LEU ILE ASP VAL GLU TRP ASN VAL LEU PRO PHE ASP SER SEQRES 23 B 537 ILE PHE ARG PHE SER PHE VAL PRO VAL ILE ASP GLY GLU SEQRES 24 B 537 PHE PHE PRO THR SER LEU GLU SER MET LEU ASN SER GLY SEQRES 25 B 537 ASN PHE LYS LYS THR GLN ILE LEU LEU GLY VAL ASN LYS SEQRES 26 B 537 ASP GLU GLY SER PHE PHE LEU LEU TYR GLY ALA PRO GLY SEQRES 27 B 537 PHE SER LYS ASP SER GLU SER LYS ILE SER ARG GLU ASP SEQRES 28 B 537 PHE MET SER GLY VAL LYS LEU SER VAL PRO HIS ALA ASN SEQRES 29 B 537 ASP LEU GLY LEU ASP ALA VAL THR LEU GLN TYR THR ASP SEQRES 30 B 537 TRP MET ASP ASP ASN ASN GLY ILE LYS ASN ARG ASP GLY SEQRES 31 B 537 LEU ASP ASP ILE VAL GLY ASP HIS ASN VAL ILE CYS PRO SEQRES 32 B 537 LEU MET HIS PHE VAL ASN LYS TYR THR LYS PHE GLY ASN SEQRES 33 B 537 GLY THR TYR LEU TYR PHE PHE ASN HIS ARG ALA SER ASN SEQRES 34 B 537 LEU VAL TRP PRO GLU TRP MET GLY VAL ILE HIS GLY TYR SEQRES 35 B 537 GLU ILE GLU PHE VAL PHE GLY LEU PRO LEU VAL LYS GLU SEQRES 36 B 537 LEU ASN TYR THR ALA GLU GLU GLU ALA LEU SER ARG ARG SEQRES 37 B 537 ILE MET HIS TYR TRP ALA THR PHE ALA LYS THR GLY ASN SEQRES 38 B 537 PRO ASN GLU PRO HIS SER GLN GLU SER LYS TRP PRO LEU SEQRES 39 B 537 PHE THR THR LYS GLU GLN LYS PHE ILE ASP LEU ASN THR SEQRES 40 B 537 GLU PRO MET LYS VAL HIS GLN ARG LEU ARG VAL GLN MET SEQRES 41 B 537 CYS VAL PHE TRP ASN GLN PHE LEU PRO LYS LEU LEU ASN SEQRES 42 B 537 ALA THR ALA CYS HET NAG A 601 14 HET NAG A 602 14 HET ELT A 603 8 HET DQ5 A 604 29 HET CL A 605 1 HET CL A 606 1 HET PG4 A 607 13 HET CL A 608 1 HET CL A 609 1 HET CL A 610 1 HET NAG B 601 14 HET NAG B 602 14 HET ELT B 603 8 HET NAG B 604 14 HET CL B 605 1 HET NA B 606 1 HET CL B 607 1 HET CL B 608 1 HET P6G B 609 19 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ELT ETHOXY-~{N},~{N}-DIMETHYL-PHOSPHONAMIDIC ACID HETNAM DQ5 2-[(~{E})-HYDROXYIMINOMETHYL]-6-[4-(1,2,3,4- HETNAM 2 DQ5 TETRAHYDROACRIDIN-9-YLAMINO)BUTYL]PYRIDIN-3-OL HETNAM CL CHLORIDE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM NA SODIUM ION HETNAM P6G HEXAETHYLENE GLYCOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 NAG 5(C8 H15 N O6) FORMUL 5 ELT 2(C4 H12 N O3 P) FORMUL 6 DQ5 C23 H26 N4 O2 FORMUL 7 CL 8(CL 1-) FORMUL 9 PG4 C8 H18 O5 FORMUL 18 NA NA 1+ FORMUL 21 P6G C12 H26 O7 FORMUL 22 HOH *233(H2 O) HELIX 1 AA1 VAL A 40 ARG A 44 5 5 HELIX 2 AA2 PHE A 78 MET A 83 1 6 HELIX 3 AA3 GLY A 132 GLU A 140 1 9 HELIX 4 AA4 GLY A 151 LEU A 156 1 6 HELIX 5 AA5 ASN A 167 ILE A 184 1 18 HELIX 6 AA6 GLN A 185 PHE A 187 5 3 HELIX 7 AA7 SER A 200 SER A 212 1 13 HELIX 8 AA8 SER A 212 ASP A 217 1 6 HELIX 9 AA9 SER A 237 ASN A 251 1 15 HELIX 10 AB1 ASP A 259 GLU A 268 1 10 HELIX 11 AB2 LYS A 270 GLU A 278 1 9 HELIX 12 AB3 TRP A 279 LEU A 282 5 4 HELIX 13 AB4 SER A 304 GLY A 312 1 9 HELIX 14 AB5 GLY A 328 ALA A 336 1 9 HELIX 15 AB6 SER A 348 VAL A 360 1 13 HELIX 16 AB7 ASN A 364 THR A 376 1 13 HELIX 17 AB8 ASN A 383 VAL A 400 1 18 HELIX 18 AB9 VAL A 400 GLY A 415 1 16 HELIX 19 AC1 PRO A 433 GLY A 437 5 5 HELIX 20 AC2 GLU A 443 PHE A 448 1 6 HELIX 21 AC3 GLY A 449 ASN A 457 5 9 HELIX 22 AC4 THR A 459 GLY A 480 1 22 HELIX 23 AC5 ARG A 517 GLN A 526 1 10 HELIX 24 AC6 GLN A 526 THR A 535 1 10 HELIX 25 AC7 VAL B 40 ARG B 44 5 5 HELIX 26 AC8 PHE B 78 MET B 83 1 6 HELIX 27 AC9 LEU B 127 ASN B 131 5 5 HELIX 28 AD1 GLY B 132 GLU B 140 1 9 HELIX 29 AD2 VAL B 150 LEU B 156 1 7 HELIX 30 AD3 ASN B 167 ILE B 184 1 18 HELIX 31 AD4 GLN B 185 PHE B 187 5 3 HELIX 32 AD5 SER B 200 SER B 212 1 13 HELIX 33 AD6 SER B 212 ASP B 217 1 6 HELIX 34 AD7 VAL B 238 ASN B 251 1 14 HELIX 35 AD8 SER B 258 LYS B 269 1 12 HELIX 36 AD9 LYS B 270 GLU B 278 1 9 HELIX 37 AE1 TRP B 279 LEU B 282 5 4 HELIX 38 AE2 SER B 304 GLY B 312 1 9 HELIX 39 AE3 GLY B 328 ALA B 336 1 9 HELIX 40 AE4 SER B 348 VAL B 360 1 13 HELIX 41 AE5 ASN B 364 THR B 376 1 13 HELIX 42 AE6 ASN B 383 VAL B 400 1 18 HELIX 43 AE7 VAL B 400 GLY B 415 1 16 HELIX 44 AE8 PRO B 433 GLY B 437 5 5 HELIX 45 AE9 GLU B 443 PHE B 448 1 6 HELIX 46 AF1 GLY B 449 ASN B 457 5 9 HELIX 47 AF2 THR B 459 GLY B 480 1 22 HELIX 48 AF3 ARG B 517 GLN B 526 1 10 HELIX 49 AF4 GLN B 526 THR B 535 1 10 SHEET 1 AA1 3 LEU A 7 THR A 10 0 SHEET 2 AA1 3 GLY A 13 MET A 16 -1 O VAL A 15 N VAL A 8 SHEET 3 AA1 3 VAL A 57 ASN A 59 1 O TRP A 58 N MET A 16 SHEET 1 AA211 THR A 18 VAL A 22 0 SHEET 2 AA211 SER A 25 PRO A 34 -1 O SER A 25 N VAL A 22 SHEET 3 AA211 TYR A 96 PRO A 102 -1 O ILE A 99 N PHE A 30 SHEET 4 AA211 VAL A 142 SER A 145 -1 O LEU A 143 N TRP A 100 SHEET 5 AA211 THR A 109 ILE A 115 1 N TRP A 114 O VAL A 144 SHEET 6 AA211 GLY A 189 GLU A 199 1 O PHE A 197 N VAL A 113 SHEET 7 AA211 ARG A 221 GLN A 225 1 O ILE A 223 N ILE A 196 SHEET 8 AA211 ILE A 319 ASN A 324 1 O LEU A 320 N LEU A 224 SHEET 9 AA211 THR A 418 PHE A 423 1 O TYR A 419 N LEU A 321 SHEET 10 AA211 LYS A 501 LEU A 505 1 O ILE A 503 N PHE A 422 SHEET 11 AA211 VAL A 512 GLN A 514 -1 O HIS A 513 N PHE A 502 SHEET 1 AA3 2 ASN A 66 CYS A 67 0 SHEET 2 AA3 2 MET A 90 SER A 91 1 O SER A 91 N ASN A 66 SHEET 1 AA4 3 LEU B 7 ASN B 9 0 SHEET 2 AA4 3 LYS B 14 MET B 16 -1 O VAL B 15 N VAL B 8 SHEET 3 AA4 3 VAL B 57 ASN B 59 1 O TRP B 58 N MET B 16 SHEET 1 AA511 THR B 18 VAL B 22 0 SHEET 2 AA511 SER B 25 PRO B 34 -1 O ILE B 27 N VAL B 20 SHEET 3 AA511 TYR B 96 VAL B 101 -1 O VAL B 101 N SER B 28 SHEET 4 AA511 VAL B 142 SER B 145 -1 O LEU B 143 N TRP B 100 SHEET 5 AA511 THR B 109 ILE B 115 1 N TRP B 114 O VAL B 144 SHEET 6 AA511 GLY B 189 GLU B 199 1 O THR B 195 N VAL B 111 SHEET 7 AA511 ARG B 221 GLN B 225 1 O GLN B 225 N GLY B 198 SHEET 8 AA511 ILE B 319 ASN B 324 1 O GLY B 322 N LEU B 224 SHEET 9 AA511 THR B 418 PHE B 423 1 O PHE B 423 N VAL B 323 SHEET 10 AA511 LYS B 501 LEU B 505 1 O ILE B 503 N PHE B 422 SHEET 11 AA511 VAL B 512 GLN B 514 -1 O HIS B 513 N PHE B 502 SHEET 1 AA6 2 VAL B 236 SER B 237 0 SHEET 2 AA6 2 VAL B 295 ILE B 296 1 O ILE B 296 N VAL B 236 SSBOND 1 CYS A 67 CYS A 94 1555 1555 2.06 SSBOND 2 CYS A 254 CYS A 265 1555 1555 2.04 SSBOND 3 CYS A 402 CYS A 521 1555 1555 2.05 SSBOND 4 CYS B 67 CYS B 94 1555 1555 2.04 SSBOND 5 CYS B 254 CYS B 265 1555 1555 2.06 SSBOND 6 CYS B 402 CYS B 521 1555 1555 2.11 LINK ND2 ASN A 59 C1 NAG A 601 1555 1555 1.46 LINK OG SER A 200 P01 ELT A 603 1555 1555 1.61 LINK ND2 ASN A 416 C1 NAG A 602 1555 1555 1.46 LINK ND2 ASN B 59 C1 NAG B 601 1555 1555 1.45 LINK OG SER B 200 P01 ELT B 603 1555 1555 1.57 LINK ND2 ASN B 416 C1 NAG B 602 1555 1555 1.45 LINK ND2 ASN B 457 C1 NAG B 604 1555 1555 1.44 LINK OD2 ASP B 259 NA NA B 606 1555 1555 2.35 CISPEP 1 SER A 103 PRO A 104 0 -1.41 CISPEP 2 SER B 103 PRO B 104 0 3.45 CRYST1 91.543 106.351 150.533 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010924 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009403 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006643 0.00000