HEADER TRANSFERASE 28-MAR-18 6G4Z
TITLE CRYSTAL STRUCTURE OF MURINE NF-KAPPAB INDUCING KINASE (NIK) IN COMPLEX
TITLE 2 WITH COMPOUND 2F
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE,SERINE/THREONINE-PROTEIN
COMPND 5 KINASE NIK;
COMPND 6 EC: 2.7.11.25;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: MAP3K14, NIK;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108
KEYWDS PROTEIN SERINE/THREONINE KINASE, NF-KAPPAB, MAP3K14, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR H.LEONARDO-SILVESTRE,P.A.MCEWAN,S.G.HYMOWITZ
REVDAT 4 17-JAN-24 6G4Z 1 REMARK
REVDAT 3 22-AUG-18 6G4Z 1 TITLE JRNL
REVDAT 2 01-AUG-18 6G4Z 1 JRNL
REVDAT 1 04-JUL-18 6G4Z 0
JRNL AUTH N.BLAQUIERE,G.M.CASTANEDO,J.D.BURCH,L.M.BEREZHKOVSKIY,
JRNL AUTH 2 H.BRIGHTBILL,S.BROWN,C.CHAN,P.C.CHIANG,J.J.CRAWFORD,T.DONG,
JRNL AUTH 3 P.FAN,J.FENG,N.GHILARDI,R.GODEMANN,E.GOGOL,A.GRABBE,
JRNL AUTH 4 A.J.HOLE,B.HU,S.G.HYMOWITZ,M.H.ALAOUI ISMAILI,H.LE,P.LEE,
JRNL AUTH 5 W.LEE,X.LIN,N.LIU,P.A.MCEWAN,B.MCKENZIE,H.L.SILVESTRE,
JRNL AUTH 6 E.SUTO,S.SUJATHA-BHASKAR,G.WU,L.C.WU,Y.ZHANG,Z.ZHONG,
JRNL AUTH 7 S.T.STABEN
JRNL TITL SCAFFOLD-HOPPING APPROACH TO DISCOVER POTENT, SELECTIVE, AND
JRNL TITL 2 EFFICACIOUS INHIBITORS OF NF-KAPPA B INDUCING KINASE.
JRNL REF J. MED. CHEM. V. 61 6801 2018
JRNL REFN ISSN 1520-4804
JRNL PMID 29940120
JRNL DOI 10.1021/ACS.JMEDCHEM.8B00678
REMARK 2
REMARK 2 RESOLUTION. 2.84 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0049
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.84
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.21
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0
REMARK 3 NUMBER OF REFLECTIONS : 21715
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.237
REMARK 3 R VALUE (WORKING SET) : 0.234
REMARK 3 FREE R VALUE : 0.283
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 1171
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.84
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.91
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1660
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88
REMARK 3 BIN R VALUE (WORKING SET) : 0.3010
REMARK 3 BIN FREE R VALUE SET COUNT : 76
REMARK 3 BIN FREE R VALUE : 0.3930
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5020
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 58
REMARK 3 SOLVENT ATOMS : 18
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.77
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.02000
REMARK 3 B22 (A**2) : 0.02000
REMARK 3 B33 (A**2) : -0.04000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 1.348
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.400
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.342
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 39.116
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.894
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5207 ; 0.005 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 4997 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7050 ; 1.052 ; 1.990
REMARK 3 BOND ANGLES OTHERS (DEGREES): 11540 ; 0.701 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 643 ; 5.477 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 215 ;33.017 ;23.442
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 900 ;15.319 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;14.664 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 755 ; 0.052 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5861 ; 0.004 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): 1148 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2584 ; 2.170 ; 6.387
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2583 ; 2.166 ; 6.386
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3220 ; 3.737 ; 9.572
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3221 ; 3.738 ; 9.573
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2623 ; 2.111 ; 6.682
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2623 ; 2.111 ; 6.682
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3830 ; 3.631 ; 9.916
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5780 ; 6.092 ;50.811
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5781 ; 6.092 ;50.816
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 334 A 472
REMARK 3 ORIGIN FOR THE GROUP (A): 40.4621 46.9095 1.5871
REMARK 3 T TENSOR
REMARK 3 T11: 0.0995 T22: 0.0666
REMARK 3 T33: 0.0835 T12: 0.0139
REMARK 3 T13: -0.0285 T23: 0.0538
REMARK 3 L TENSOR
REMARK 3 L11: 1.8159 L22: 0.7609
REMARK 3 L33: 0.4499 L12: -0.8187
REMARK 3 L13: -0.3371 L23: 0.0608
REMARK 3 S TENSOR
REMARK 3 S11: 0.0022 S12: 0.0182 S13: 0.0122
REMARK 3 S21: 0.0659 S22: 0.0238 S23: -0.0307
REMARK 3 S31: 0.0217 S32: -0.0065 S33: -0.0260
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 473 A 675
REMARK 3 ORIGIN FOR THE GROUP (A): 12.7639 54.6184 3.5200
REMARK 3 T TENSOR
REMARK 3 T11: 0.0173 T22: 0.1553
REMARK 3 T33: 0.0709 T12: -0.0242
REMARK 3 T13: -0.0163 T23: 0.0476
REMARK 3 L TENSOR
REMARK 3 L11: 1.6994 L22: 1.1040
REMARK 3 L33: 1.5185 L12: 0.4106
REMARK 3 L13: 0.5132 L23: 0.2722
REMARK 3 S TENSOR
REMARK 3 S11: 0.1118 S12: -0.1477 S13: 0.0719
REMARK 3 S21: -0.0124 S22: -0.2053 S23: 0.1443
REMARK 3 S31: 0.0061 S32: -0.0613 S33: 0.0935
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 334 B 472
REMARK 3 ORIGIN FOR THE GROUP (A): 67.9112 31.6399 -4.2589
REMARK 3 T TENSOR
REMARK 3 T11: 0.0887 T22: 0.0559
REMARK 3 T33: 0.1142 T12: 0.0062
REMARK 3 T13: -0.0544 T23: 0.0373
REMARK 3 L TENSOR
REMARK 3 L11: 1.7456 L22: 0.5679
REMARK 3 L33: 0.8188 L12: 0.5196
REMARK 3 L13: -0.4588 L23: 0.1090
REMARK 3 S TENSOR
REMARK 3 S11: -0.0400 S12: -0.0213 S13: 0.0947
REMARK 3 S21: 0.0051 S22: 0.1180 S23: 0.0306
REMARK 3 S31: 0.0797 S32: 0.0622 S33: -0.0780
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 473 B 675
REMARK 3 ORIGIN FOR THE GROUP (A): 43.5769 17.6391 -1.8957
REMARK 3 T TENSOR
REMARK 3 T11: 0.0800 T22: 0.0791
REMARK 3 T33: 0.1243 T12: -0.0497
REMARK 3 T13: -0.0418 T23: 0.0667
REMARK 3 L TENSOR
REMARK 3 L11: 0.4174 L22: 2.3276
REMARK 3 L33: 1.6156 L12: 0.1304
REMARK 3 L13: 0.0797 L23: -0.4385
REMARK 3 S TENSOR
REMARK 3 S11: -0.0978 S12: 0.0962 S13: -0.0462
REMARK 3 S21: 0.0668 S22: 0.1719 S23: 0.2046
REMARK 3 S31: 0.0197 S32: -0.0806 S33: -0.0741
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 6G4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-18.
REMARK 100 THE DEPOSITION ID IS D_1200008316.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 12-JUN-13
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I02
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21715
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840
REMARK 200 RESOLUTION RANGE LOW (A) : 36.210
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1
REMARK 200 DATA REDUNDANCY : 6.100
REMARK 200 R MERGE (I) : 0.10400
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.84
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 6.10
REMARK 200 R MERGE FOR SHELL (I) : 0.74500
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 4G3E
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 61.14
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3-0.9M AMMONIUM SULPHATE, 0.05-0.1M
REMARK 280 SODIUM CITRATE, 0.7-1.0M LITHIUM SULPHATE, PH 6.2, VAPOR
REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y,X,Z+3/4
REMARK 290 4555 Y,-X,Z+1/4
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.26500
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.89750
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.63250
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 327
REMARK 465 SER A 328
REMARK 465 ALA A 329
REMARK 465 LEU A 330
REMARK 465 GLU A 331
REMARK 465 LYS A 332
REMARK 465 VAL A 333
REMARK 465 SER A 364
REMARK 465 GLY A 365
REMARK 465 SER A 366
REMARK 465 ALA A 367
REMARK 465 LYS A 368
REMARK 465 LEU A 369
REMARK 465 GLN A 370
REMARK 465 ARG A 371
REMARK 465 LEU A 372
REMARK 465 GLY A 373
REMARK 465 PRO A 374
REMARK 465 GLU A 375
REMARK 465 THR A 376
REMARK 465 GLU A 377
REMARK 465 PRO A 545
REMARK 465 ASP A 546
REMARK 465 GLY A 547
REMARK 465 LEU A 548
REMARK 465 GLY A 549
REMARK 465 LYS A 550
REMARK 465 GLY B 327
REMARK 465 SER B 328
REMARK 465 ALA B 329
REMARK 465 LEU B 330
REMARK 465 GLU B 331
REMARK 465 LYS B 332
REMARK 465 VAL B 333
REMARK 465 SER B 364
REMARK 465 GLY B 365
REMARK 465 SER B 366
REMARK 465 ALA B 367
REMARK 465 LYS B 368
REMARK 465 LEU B 369
REMARK 465 GLN B 370
REMARK 465 ARG B 371
REMARK 465 LEU B 372
REMARK 465 GLY B 373
REMARK 465 PRO B 374
REMARK 465 GLU B 375
REMARK 465 THR B 376
REMARK 465 GLU B 377
REMARK 465 TYR B 601
REMARK 465 PHE B 602
REMARK 465 ARG B 603
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 PRO A 605 C - N - CA ANGL. DEV. = 14.9 DEGREES
REMARK 500 PRO A 605 C - N - CD ANGL. DEV. = -18.5 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 GLU A 386 -35.85 -39.25
REMARK 500 ASP A 392 59.79 38.12
REMARK 500 VAL A 399 -52.67 -129.85
REMARK 500 ARG A 407 98.38 61.31
REMARK 500 ASP A 517 58.73 -168.25
REMARK 500 LYS A 519 141.43 -178.21
REMARK 500 ASP A 536 77.99 63.46
REMARK 500 PHE A 537 34.68 -92.65
REMARK 500 LEU A 552 -58.83 75.61
REMARK 500 TRP A 598 -44.26 73.74
REMARK 500 ARG A 603 -87.85 -106.88
REMARK 500 PRO A 605 97.10 17.95
REMARK 500 PRO A 640 -38.98 -39.61
REMARK 500 ASN B 379 93.86 66.72
REMARK 500 ASP B 392 59.82 33.91
REMARK 500 GLU B 398 26.68 49.79
REMARK 500 VAL B 399 -57.92 -126.79
REMARK 500 GLN B 405 -92.97 12.95
REMARK 500 ALA B 445 -70.79 -60.59
REMARK 500 ASP B 536 83.46 56.58
REMARK 500 PRO B 545 67.01 -54.46
REMARK 500 ASP B 546 -33.41 -179.02
REMARK 500 LEU B 553 53.52 102.94
REMARK 500 ASP B 556 19.81 56.70
REMARK 500 TRP B 598 88.62 64.06
REMARK 500 THR B 599 44.62 -108.43
REMARK 500 PRO B 616 44.95 -78.30
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ELW A 701
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ELW B 701
DBREF 6G4Z A 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675
DBREF 6G4Z B 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675
SEQADV 6G4Z GLY A 327 UNP Q9WUL6 EXPRESSION TAG
SEQADV 6G4Z SER A 328 UNP Q9WUL6 EXPRESSION TAG
SEQADV 6G4Z GLY B 327 UNP Q9WUL6 EXPRESSION TAG
SEQADV 6G4Z SER B 328 UNP Q9WUL6 EXPRESSION TAG
SEQRES 1 A 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU
SEQRES 2 A 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA
SEQRES 3 A 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY
SEQRES 4 A 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP
SEQRES 5 A 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL
SEQRES 6 A 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS
SEQRES 7 A 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS
SEQRES 8 A 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL
SEQRES 9 A 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU
SEQRES 10 A 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO
SEQRES 11 A 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE
SEQRES 12 A 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU
SEQRES 13 A 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU
SEQRES 14 A 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU
SEQRES 15 A 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP
SEQRES 16 A 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU
SEQRES 17 A 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY
SEQRES 18 A 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY
SEQRES 19 A 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS
SEQRES 20 A 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS
SEQRES 21 A 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR
SEQRES 22 A 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER
SEQRES 23 A 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA
SEQRES 24 A 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS
SEQRES 25 A 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG
SEQRES 26 A 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS
SEQRES 27 A 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG
SEQRES 1 B 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU
SEQRES 2 B 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA
SEQRES 3 B 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY
SEQRES 4 B 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP
SEQRES 5 B 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL
SEQRES 6 B 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS
SEQRES 7 B 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS
SEQRES 8 B 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL
SEQRES 9 B 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU
SEQRES 10 B 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO
SEQRES 11 B 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE
SEQRES 12 B 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU
SEQRES 13 B 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU
SEQRES 14 B 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU
SEQRES 15 B 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP
SEQRES 16 B 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU
SEQRES 17 B 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY
SEQRES 18 B 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY
SEQRES 19 B 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS
SEQRES 20 B 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS
SEQRES 21 B 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR
SEQRES 22 B 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER
SEQRES 23 B 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA
SEQRES 24 B 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS
SEQRES 25 B 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG
SEQRES 26 B 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS
SEQRES 27 B 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG
HET ELW A 701 29
HET ELW B 701 29
HETNAM ELW 5-FLUORANYL-1-[4-[2-[(3~{R})-1-METHYL-3-OXIDANYL-2-
HETNAM 2 ELW OXIDANYLIDENE-PYRROL-3-YL]ETHYNYL]PYRIDIN-2-
HETNAM 3 ELW YL]INDAZOLE-3-CARBOXAMIDE
FORMUL 3 ELW 2(C20 H14 F N5 O3)
FORMUL 5 HOH *18(H2 O)
HELIX 1 AA1 VAL A 335 GLN A 344 1 10
HELIX 2 AA2 GLN A 351 THR A 361 1 11
HELIX 3 AA3 VAL A 440 ALA A 447 1 8
HELIX 4 AA4 SER A 478 GLY A 487 1 10
HELIX 5 AA5 PRO A 490 ARG A 511 1 22
HELIX 6 AA6 LYS A 519 ASP A 521 5 3
HELIX 7 AA7 ALA A 566 GLY A 572 1 7
HELIX 8 AA8 ALA A 577 GLY A 594 1 18
HELIX 9 AA9 PRO A 605 GLU A 613 1 9
HELIX 10 AB1 PRO A 616 ILE A 620 5 5
HELIX 11 AB2 ALA A 625 LEU A 636 1 12
HELIX 12 AB3 SER A 645 VAL A 660 1 16
HELIX 13 AB4 VAL B 335 GLN B 344 1 10
HELIX 14 AB5 GLN B 351 LYS B 360 1 10
HELIX 15 AB6 GLU B 436 ARG B 439 5 4
HELIX 16 AB7 VAL B 440 ALA B 447 1 8
HELIX 17 AB8 SER B 478 GLY B 487 1 10
HELIX 18 AB9 PRO B 490 ARG B 511 1 22
HELIX 19 AC1 LYS B 519 ASP B 521 5 3
HELIX 20 AC2 ALA B 566 MET B 571 1 6
HELIX 21 AC3 ALA B 577 GLY B 594 1 18
HELIX 22 AC4 PRO B 605 GLU B 613 1 9
HELIX 23 AC5 PRO B 615 ILE B 620 5 6
HELIX 24 AC6 ALA B 625 GLY B 635 1 11
HELIX 25 AC7 SER B 645 VAL B 660 1 16
SHEET 1 AA1 7 VAL A 347 SER A 349 0
SHEET 2 AA1 7 ASN A 379 LEU A 383 1 O LEU A 383 N SER A 348
SHEET 3 AA1 7 LEU A 457 GLU A 463 -1 O ARG A 462 N GLU A 380
SHEET 4 AA1 7 TRP A 466 MET A 471 -1 O ASN A 468 N VAL A 461
SHEET 5 AA1 7 GLN A 427 ARG A 434 -1 N LYS A 431 O ILE A 469
SHEET 6 AA1 7 VAL A 416 ASP A 421 -1 N MET A 419 O CYS A 428
SHEET 7 AA1 7 TRP A 401 THR A 403 -1 N MET A 402 O LYS A 420
SHEET 1 AA2 2 ILE A 513 LEU A 514 0
SHEET 2 AA2 2 LEU A 541 CYS A 542 -1 O LEU A 541 N LEU A 514
SHEET 1 AA3 2 VAL A 523 LEU A 525 0
SHEET 2 AA3 2 ALA A 532 LEU A 534 -1 O ALA A 533 N LEU A 524
SHEET 1 AA4 7 VAL B 347 SER B 349 0
SHEET 2 AA4 7 GLU B 380 LEU B 383 1 O LEU B 383 N SER B 348
SHEET 3 AA4 7 LEU B 457 GLU B 463 -1 O ARG B 462 N GLU B 380
SHEET 4 AA4 7 TRP B 466 MET B 471 -1 O PHE B 470 N TYR B 458
SHEET 5 AA4 7 GLN B 427 ARG B 434 -1 N LYS B 431 O ILE B 469
SHEET 6 AA4 7 VAL B 416 ASP B 421 -1 N HIS B 417 O VAL B 430
SHEET 7 AA4 7 TRP B 401 THR B 403 -1 N MET B 402 O LYS B 420
SHEET 1 AA5 2 ILE B 513 LEU B 514 0
SHEET 2 AA5 2 LEU B 541 CYS B 542 -1 O LEU B 541 N LEU B 514
SHEET 1 AA6 2 VAL B 523 LEU B 525 0
SHEET 2 AA6 2 ALA B 532 LEU B 534 -1 O ALA B 533 N LEU B 524
SITE 1 AC1 18 ARG A 410 VAL A 416 ALA A 429 GLU A 442
SITE 2 AC1 18 CYS A 446 VAL A 455 ILE A 469 MET A 471
SITE 3 AC1 18 GLU A 472 LEU A 473 LEU A 474 GLY A 477
SITE 4 AC1 18 SER A 478 GLN A 481 LEU A 524 CYS A 535
SITE 5 AC1 18 ASP A 536 PHE A 537
SITE 1 AC2 17 ARG B 410 VAL B 416 ALA B 429 LYS B 431
SITE 2 AC2 17 GLU B 442 VAL B 455 ILE B 469 MET B 471
SITE 3 AC2 17 GLU B 472 LEU B 474 GLY B 477 SER B 478
SITE 4 AC2 17 GLN B 481 LEU B 524 CYS B 535 ASP B 536
SITE 5 AC2 17 PHE B 537
CRYST1 144.830 144.830 46.530 90.00 90.00 90.00 P 43 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006905 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006905 0.000000 0.00000
SCALE3 0.000000 0.000000 0.021492 0.00000