HEADER TRANSFERASE 28-MAR-18 6G4Z TITLE CRYSTAL STRUCTURE OF MURINE NF-KAPPAB INDUCING KINASE (NIK) IN COMPLEX TITLE 2 WITH COMPOUND 2F COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE,SERINE/THREONINE-PROTEIN COMPND 5 KINASE NIK; COMPND 6 EC: 2.7.11.25; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MAP3K14, NIK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS PROTEIN SERINE/THREONINE KINASE, NF-KAPPAB, MAP3K14, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.LEONARDO-SILVESTRE,P.A.MCEWAN,S.G.HYMOWITZ REVDAT 4 17-JAN-24 6G4Z 1 REMARK REVDAT 3 22-AUG-18 6G4Z 1 TITLE JRNL REVDAT 2 01-AUG-18 6G4Z 1 JRNL REVDAT 1 04-JUL-18 6G4Z 0 JRNL AUTH N.BLAQUIERE,G.M.CASTANEDO,J.D.BURCH,L.M.BEREZHKOVSKIY, JRNL AUTH 2 H.BRIGHTBILL,S.BROWN,C.CHAN,P.C.CHIANG,J.J.CRAWFORD,T.DONG, JRNL AUTH 3 P.FAN,J.FENG,N.GHILARDI,R.GODEMANN,E.GOGOL,A.GRABBE, JRNL AUTH 4 A.J.HOLE,B.HU,S.G.HYMOWITZ,M.H.ALAOUI ISMAILI,H.LE,P.LEE, JRNL AUTH 5 W.LEE,X.LIN,N.LIU,P.A.MCEWAN,B.MCKENZIE,H.L.SILVESTRE, JRNL AUTH 6 E.SUTO,S.SUJATHA-BHASKAR,G.WU,L.C.WU,Y.ZHANG,Z.ZHONG, JRNL AUTH 7 S.T.STABEN JRNL TITL SCAFFOLD-HOPPING APPROACH TO DISCOVER POTENT, SELECTIVE, AND JRNL TITL 2 EFFICACIOUS INHIBITORS OF NF-KAPPA B INDUCING KINASE. JRNL REF J. MED. CHEM. V. 61 6801 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29940120 JRNL DOI 10.1021/ACS.JMEDCHEM.8B00678 REMARK 2 REMARK 2 RESOLUTION. 2.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 21715 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1171 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1660 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5020 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.348 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.400 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.342 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 39.116 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.894 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5207 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4997 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7050 ; 1.052 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11540 ; 0.701 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 643 ; 5.477 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 215 ;33.017 ;23.442 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 900 ;15.319 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;14.664 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 755 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5861 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1148 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2584 ; 2.170 ; 6.387 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2583 ; 2.166 ; 6.386 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3220 ; 3.737 ; 9.572 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3221 ; 3.738 ; 9.573 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2623 ; 2.111 ; 6.682 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2623 ; 2.111 ; 6.682 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3830 ; 3.631 ; 9.916 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5780 ; 6.092 ;50.811 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5781 ; 6.092 ;50.816 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 334 A 472 REMARK 3 ORIGIN FOR THE GROUP (A): 40.4621 46.9095 1.5871 REMARK 3 T TENSOR REMARK 3 T11: 0.0995 T22: 0.0666 REMARK 3 T33: 0.0835 T12: 0.0139 REMARK 3 T13: -0.0285 T23: 0.0538 REMARK 3 L TENSOR REMARK 3 L11: 1.8159 L22: 0.7609 REMARK 3 L33: 0.4499 L12: -0.8187 REMARK 3 L13: -0.3371 L23: 0.0608 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0182 S13: 0.0122 REMARK 3 S21: 0.0659 S22: 0.0238 S23: -0.0307 REMARK 3 S31: 0.0217 S32: -0.0065 S33: -0.0260 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 473 A 675 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7639 54.6184 3.5200 REMARK 3 T TENSOR REMARK 3 T11: 0.0173 T22: 0.1553 REMARK 3 T33: 0.0709 T12: -0.0242 REMARK 3 T13: -0.0163 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 1.6994 L22: 1.1040 REMARK 3 L33: 1.5185 L12: 0.4106 REMARK 3 L13: 0.5132 L23: 0.2722 REMARK 3 S TENSOR REMARK 3 S11: 0.1118 S12: -0.1477 S13: 0.0719 REMARK 3 S21: -0.0124 S22: -0.2053 S23: 0.1443 REMARK 3 S31: 0.0061 S32: -0.0613 S33: 0.0935 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 334 B 472 REMARK 3 ORIGIN FOR THE GROUP (A): 67.9112 31.6399 -4.2589 REMARK 3 T TENSOR REMARK 3 T11: 0.0887 T22: 0.0559 REMARK 3 T33: 0.1142 T12: 0.0062 REMARK 3 T13: -0.0544 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.7456 L22: 0.5679 REMARK 3 L33: 0.8188 L12: 0.5196 REMARK 3 L13: -0.4588 L23: 0.1090 REMARK 3 S TENSOR REMARK 3 S11: -0.0400 S12: -0.0213 S13: 0.0947 REMARK 3 S21: 0.0051 S22: 0.1180 S23: 0.0306 REMARK 3 S31: 0.0797 S32: 0.0622 S33: -0.0780 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 473 B 675 REMARK 3 ORIGIN FOR THE GROUP (A): 43.5769 17.6391 -1.8957 REMARK 3 T TENSOR REMARK 3 T11: 0.0800 T22: 0.0791 REMARK 3 T33: 0.1243 T12: -0.0497 REMARK 3 T13: -0.0418 T23: 0.0667 REMARK 3 L TENSOR REMARK 3 L11: 0.4174 L22: 2.3276 REMARK 3 L33: 1.6156 L12: 0.1304 REMARK 3 L13: 0.0797 L23: -0.4385 REMARK 3 S TENSOR REMARK 3 S11: -0.0978 S12: 0.0962 S13: -0.0462 REMARK 3 S21: 0.0668 S22: 0.1719 S23: 0.2046 REMARK 3 S31: 0.0197 S32: -0.0806 S33: -0.0741 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6G4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200008316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21715 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840 REMARK 200 RESOLUTION RANGE LOW (A) : 36.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4G3E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3-0.9M AMMONIUM SULPHATE, 0.05-0.1M REMARK 280 SODIUM CITRATE, 0.7-1.0M LITHIUM SULPHATE, PH 6.2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.26500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.89750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.63250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 327 REMARK 465 SER A 328 REMARK 465 ALA A 329 REMARK 465 LEU A 330 REMARK 465 GLU A 331 REMARK 465 LYS A 332 REMARK 465 VAL A 333 REMARK 465 SER A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 ALA A 367 REMARK 465 LYS A 368 REMARK 465 LEU A 369 REMARK 465 GLN A 370 REMARK 465 ARG A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 PRO A 374 REMARK 465 GLU A 375 REMARK 465 THR A 376 REMARK 465 GLU A 377 REMARK 465 PRO A 545 REMARK 465 ASP A 546 REMARK 465 GLY A 547 REMARK 465 LEU A 548 REMARK 465 GLY A 549 REMARK 465 LYS A 550 REMARK 465 GLY B 327 REMARK 465 SER B 328 REMARK 465 ALA B 329 REMARK 465 LEU B 330 REMARK 465 GLU B 331 REMARK 465 LYS B 332 REMARK 465 VAL B 333 REMARK 465 SER B 364 REMARK 465 GLY B 365 REMARK 465 SER B 366 REMARK 465 ALA B 367 REMARK 465 LYS B 368 REMARK 465 LEU B 369 REMARK 465 GLN B 370 REMARK 465 ARG B 371 REMARK 465 LEU B 372 REMARK 465 GLY B 373 REMARK 465 PRO B 374 REMARK 465 GLU B 375 REMARK 465 THR B 376 REMARK 465 GLU B 377 REMARK 465 TYR B 601 REMARK 465 PHE B 602 REMARK 465 ARG B 603 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 605 C - N - CA ANGL. DEV. = 14.9 DEGREES REMARK 500 PRO A 605 C - N - CD ANGL. DEV. = -18.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 386 -35.85 -39.25 REMARK 500 ASP A 392 59.79 38.12 REMARK 500 VAL A 399 -52.67 -129.85 REMARK 500 ARG A 407 98.38 61.31 REMARK 500 ASP A 517 58.73 -168.25 REMARK 500 LYS A 519 141.43 -178.21 REMARK 500 ASP A 536 77.99 63.46 REMARK 500 PHE A 537 34.68 -92.65 REMARK 500 LEU A 552 -58.83 75.61 REMARK 500 TRP A 598 -44.26 73.74 REMARK 500 ARG A 603 -87.85 -106.88 REMARK 500 PRO A 605 97.10 17.95 REMARK 500 PRO A 640 -38.98 -39.61 REMARK 500 ASN B 379 93.86 66.72 REMARK 500 ASP B 392 59.82 33.91 REMARK 500 GLU B 398 26.68 49.79 REMARK 500 VAL B 399 -57.92 -126.79 REMARK 500 GLN B 405 -92.97 12.95 REMARK 500 ALA B 445 -70.79 -60.59 REMARK 500 ASP B 536 83.46 56.58 REMARK 500 PRO B 545 67.01 -54.46 REMARK 500 ASP B 546 -33.41 -179.02 REMARK 500 LEU B 553 53.52 102.94 REMARK 500 ASP B 556 19.81 56.70 REMARK 500 TRP B 598 88.62 64.06 REMARK 500 THR B 599 44.62 -108.43 REMARK 500 PRO B 616 44.95 -78.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ELW A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ELW B 701 DBREF 6G4Z A 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 DBREF 6G4Z B 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 SEQADV 6G4Z GLY A 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 6G4Z SER A 328 UNP Q9WUL6 EXPRESSION TAG SEQADV 6G4Z GLY B 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 6G4Z SER B 328 UNP Q9WUL6 EXPRESSION TAG SEQRES 1 A 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 A 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 A 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 A 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 A 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 A 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 A 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 A 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 A 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 A 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 A 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 A 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 A 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 A 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 A 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 A 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 A 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 A 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 A 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 A 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 A 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 A 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 A 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 A 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 A 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 A 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 A 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG SEQRES 1 B 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 B 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 B 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 B 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 B 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 B 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 B 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 B 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 B 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 B 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 B 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 B 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 B 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 B 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 B 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 B 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 B 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 B 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 B 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 B 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 B 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 B 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 B 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 B 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 B 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 B 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 B 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG HET ELW A 701 29 HET ELW B 701 29 HETNAM ELW 5-FLUORANYL-1-[4-[2-[(3~{R})-1-METHYL-3-OXIDANYL-2- HETNAM 2 ELW OXIDANYLIDENE-PYRROL-3-YL]ETHYNYL]PYRIDIN-2- HETNAM 3 ELW YL]INDAZOLE-3-CARBOXAMIDE FORMUL 3 ELW 2(C20 H14 F N5 O3) FORMUL 5 HOH *18(H2 O) HELIX 1 AA1 VAL A 335 GLN A 344 1 10 HELIX 2 AA2 GLN A 351 THR A 361 1 11 HELIX 3 AA3 VAL A 440 ALA A 447 1 8 HELIX 4 AA4 SER A 478 GLY A 487 1 10 HELIX 5 AA5 PRO A 490 ARG A 511 1 22 HELIX 6 AA6 LYS A 519 ASP A 521 5 3 HELIX 7 AA7 ALA A 566 GLY A 572 1 7 HELIX 8 AA8 ALA A 577 GLY A 594 1 18 HELIX 9 AA9 PRO A 605 GLU A 613 1 9 HELIX 10 AB1 PRO A 616 ILE A 620 5 5 HELIX 11 AB2 ALA A 625 LEU A 636 1 12 HELIX 12 AB3 SER A 645 VAL A 660 1 16 HELIX 13 AB4 VAL B 335 GLN B 344 1 10 HELIX 14 AB5 GLN B 351 LYS B 360 1 10 HELIX 15 AB6 GLU B 436 ARG B 439 5 4 HELIX 16 AB7 VAL B 440 ALA B 447 1 8 HELIX 17 AB8 SER B 478 GLY B 487 1 10 HELIX 18 AB9 PRO B 490 ARG B 511 1 22 HELIX 19 AC1 LYS B 519 ASP B 521 5 3 HELIX 20 AC2 ALA B 566 MET B 571 1 6 HELIX 21 AC3 ALA B 577 GLY B 594 1 18 HELIX 22 AC4 PRO B 605 GLU B 613 1 9 HELIX 23 AC5 PRO B 615 ILE B 620 5 6 HELIX 24 AC6 ALA B 625 GLY B 635 1 11 HELIX 25 AC7 SER B 645 VAL B 660 1 16 SHEET 1 AA1 7 VAL A 347 SER A 349 0 SHEET 2 AA1 7 ASN A 379 LEU A 383 1 O LEU A 383 N SER A 348 SHEET 3 AA1 7 LEU A 457 GLU A 463 -1 O ARG A 462 N GLU A 380 SHEET 4 AA1 7 TRP A 466 MET A 471 -1 O ASN A 468 N VAL A 461 SHEET 5 AA1 7 GLN A 427 ARG A 434 -1 N LYS A 431 O ILE A 469 SHEET 6 AA1 7 VAL A 416 ASP A 421 -1 N MET A 419 O CYS A 428 SHEET 7 AA1 7 TRP A 401 THR A 403 -1 N MET A 402 O LYS A 420 SHEET 1 AA2 2 ILE A 513 LEU A 514 0 SHEET 2 AA2 2 LEU A 541 CYS A 542 -1 O LEU A 541 N LEU A 514 SHEET 1 AA3 2 VAL A 523 LEU A 525 0 SHEET 2 AA3 2 ALA A 532 LEU A 534 -1 O ALA A 533 N LEU A 524 SHEET 1 AA4 7 VAL B 347 SER B 349 0 SHEET 2 AA4 7 GLU B 380 LEU B 383 1 O LEU B 383 N SER B 348 SHEET 3 AA4 7 LEU B 457 GLU B 463 -1 O ARG B 462 N GLU B 380 SHEET 4 AA4 7 TRP B 466 MET B 471 -1 O PHE B 470 N TYR B 458 SHEET 5 AA4 7 GLN B 427 ARG B 434 -1 N LYS B 431 O ILE B 469 SHEET 6 AA4 7 VAL B 416 ASP B 421 -1 N HIS B 417 O VAL B 430 SHEET 7 AA4 7 TRP B 401 THR B 403 -1 N MET B 402 O LYS B 420 SHEET 1 AA5 2 ILE B 513 LEU B 514 0 SHEET 2 AA5 2 LEU B 541 CYS B 542 -1 O LEU B 541 N LEU B 514 SHEET 1 AA6 2 VAL B 523 LEU B 525 0 SHEET 2 AA6 2 ALA B 532 LEU B 534 -1 O ALA B 533 N LEU B 524 SITE 1 AC1 18 ARG A 410 VAL A 416 ALA A 429 GLU A 442 SITE 2 AC1 18 CYS A 446 VAL A 455 ILE A 469 MET A 471 SITE 3 AC1 18 GLU A 472 LEU A 473 LEU A 474 GLY A 477 SITE 4 AC1 18 SER A 478 GLN A 481 LEU A 524 CYS A 535 SITE 5 AC1 18 ASP A 536 PHE A 537 SITE 1 AC2 17 ARG B 410 VAL B 416 ALA B 429 LYS B 431 SITE 2 AC2 17 GLU B 442 VAL B 455 ILE B 469 MET B 471 SITE 3 AC2 17 GLU B 472 LEU B 474 GLY B 477 SER B 478 SITE 4 AC2 17 GLN B 481 LEU B 524 CYS B 535 ASP B 536 SITE 5 AC2 17 PHE B 537 CRYST1 144.830 144.830 46.530 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006905 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021492 0.00000