data_6G8Y # _entry.id 6G8Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.325 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6G8Y WWPDB D_1200009596 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6G8Y _pdbx_database_status.recvd_initial_deposition_date 2018-04-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jurk, C.M.' 1 ? 'Roske, Y.' 2 ? 'Heinemann, U.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country HRV _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Croatica Chemica Acta' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 0011-1643 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the Golgin GM130' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.5562/cca3341 _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jurk, C.M.' 1 ? primary 'Roske, Y.' 2 ? primary 'Heinemann, U.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6G8Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 53.443 _cell.length_a_esd ? _cell.length_b 53.443 _cell.length_b_esd ? _cell.length_c 50.923 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Acetylated cis-Golgi protein, involved in ER-to-Golgi transport' 10749.022 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 106 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DDDDKMLEVLFQGPGLRIVWVDEMQFQLQSFFDYIVGFNDDPVPVVSNQHGFSYPDYRRITSIFNEHCGRTLKVNIWSAK GGTFRDEYISII ; _entity_poly.pdbx_seq_one_letter_code_can ;DDDDKMLEVLFQGPGLRIVWVDEMQFQLQSFFDYIVGFNDDPVPVVSNQHGFSYPDYRRITSIFNEHCGRTLKVNIWSAK GGTFRDEYISII ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ASP n 1 3 ASP n 1 4 ASP n 1 5 LYS n 1 6 MET n 1 7 LEU n 1 8 GLU n 1 9 VAL n 1 10 LEU n 1 11 PHE n 1 12 GLN n 1 13 GLY n 1 14 PRO n 1 15 GLY n 1 16 LEU n 1 17 ARG n 1 18 ILE n 1 19 VAL n 1 20 TRP n 1 21 VAL n 1 22 ASP n 1 23 GLU n 1 24 MET n 1 25 GLN n 1 26 PHE n 1 27 GLN n 1 28 LEU n 1 29 GLN n 1 30 SER n 1 31 PHE n 1 32 PHE n 1 33 ASP n 1 34 TYR n 1 35 ILE n 1 36 VAL n 1 37 GLY n 1 38 PHE n 1 39 ASN n 1 40 ASP n 1 41 ASP n 1 42 PRO n 1 43 VAL n 1 44 PRO n 1 45 VAL n 1 46 VAL n 1 47 SER n 1 48 ASN n 1 49 GLN n 1 50 HIS n 1 51 GLY n 1 52 PHE n 1 53 SER n 1 54 TYR n 1 55 PRO n 1 56 ASP n 1 57 TYR n 1 58 ARG n 1 59 ARG n 1 60 ILE n 1 61 THR n 1 62 SER n 1 63 ILE n 1 64 PHE n 1 65 ASN n 1 66 GLU n 1 67 HIS n 1 68 CYS n 1 69 GLY n 1 70 ARG n 1 71 THR n 1 72 LEU n 1 73 LYS n 1 74 VAL n 1 75 ASN n 1 76 ILE n 1 77 TRP n 1 78 SER n 1 79 ALA n 1 80 LYS n 1 81 GLY n 1 82 GLY n 1 83 THR n 1 84 PHE n 1 85 ARG n 1 86 ASP n 1 87 GLU n 1 88 TYR n 1 89 ILE n 1 90 SER n 1 91 ILE n 1 92 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 92 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GRH1, SCKG_0028' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A250W7Q1_YEASX _struct_ref.pdbx_db_accession A0A250W7Q1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GLRIVWVDEMQFQLQSFFDYIVGFNDDPVPVVSNQHGFSYPDYRRITSIFNEHCGRTLKVNIWSAKGGTFRDEYISII _struct_ref.pdbx_align_begin 67 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6G8Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 15 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 92 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A250W7Q1 _struct_ref_seq.db_align_beg 67 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6G8Y ASP A 1 ? UNP A0A250W7Q1 ? ? 'expression tag' 8 1 1 6G8Y ASP A 2 ? UNP A0A250W7Q1 ? ? 'expression tag' 9 2 1 6G8Y ASP A 3 ? UNP A0A250W7Q1 ? ? 'expression tag' 10 3 1 6G8Y ASP A 4 ? UNP A0A250W7Q1 ? ? 'expression tag' 11 4 1 6G8Y LYS A 5 ? UNP A0A250W7Q1 ? ? 'expression tag' 12 5 1 6G8Y MET A 6 ? UNP A0A250W7Q1 ? ? 'expression tag' 13 6 1 6G8Y LEU A 7 ? UNP A0A250W7Q1 ? ? 'expression tag' 14 7 1 6G8Y GLU A 8 ? UNP A0A250W7Q1 ? ? 'expression tag' 15 8 1 6G8Y VAL A 9 ? UNP A0A250W7Q1 ? ? 'expression tag' 16 9 1 6G8Y LEU A 10 ? UNP A0A250W7Q1 ? ? 'expression tag' 17 10 1 6G8Y PHE A 11 ? UNP A0A250W7Q1 ? ? 'expression tag' 18 11 1 6G8Y GLN A 12 ? UNP A0A250W7Q1 ? ? 'expression tag' 19 12 1 6G8Y GLY A 13 ? UNP A0A250W7Q1 ? ? 'expression tag' 20 13 1 6G8Y PRO A 14 ? UNP A0A250W7Q1 ? ? 'expression tag' 21 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6G8Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '3.0 M NaCl, 100 mM Bis-Tris, pH 5.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-01-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91841 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6G8Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.40 _reflns.d_resolution_low 35.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16914 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.96 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.042 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.82 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1228 _reflns_shell.percent_possible_all 99.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.74 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.840 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.17 _refine.aniso_B[1][2] -0.09 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.17 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 0.55 _refine.B_iso_max ? _refine.B_iso_mean 25.042 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.954 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6G8Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.40 _refine.ls_d_res_low 26.72 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16072 _refine.ls_number_reflns_R_free 846 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.68 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.16519 _refine.ls_R_factor_R_free 0.21006 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.16285 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.079 _refine.pdbx_overall_ESU_R_Free 0.071 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.478 _refine.overall_SU_ML 0.045 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 760 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 871 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 26.72 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.019 832 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 722 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.452 1.918 1135 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.985 3.000 1679 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.028 5.000 101 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.467 24.167 48 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.323 15.000 132 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 12.059 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.095 0.200 114 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.021 956 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 197 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.291 2.213 383 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.294 2.214 382 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.707 3.338 482 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.704 3.337 483 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.478 2.635 447 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.478 2.634 447 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.793 3.791 651 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.525 28.591 995 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.523 28.624 996 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 1.882 3.000 1549 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 21.033 5.000 47 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 8.012 5.000 1586 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.400 _refine_ls_shell.d_res_low 1.436 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_R_work 1175 _refine_ls_shell.percent_reflns_obs 99.68 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.260 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.211 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6G8Y _struct.title 'Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the Golgin GM130' _struct.pdbx_descriptor 'Golgi reassembly-stacking protein 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6G8Y _struct_keywords.text ;PDZ1 domain structure, Golgi stacking, GRASP family, Grh1, Golgins, Golgi apparatus, yeast homolog of GRASP65, vesicle transport, PROTEIN BINDING ; _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 1 ? PHE A 11 ? ASP A 8 PHE A 18 1 ? 11 HELX_P HELX_P2 AA2 ASP A 56 ? HIS A 67 ? ASP A 63 HIS A 74 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 19 ? TRP A 20 ? VAL A 26 TRP A 27 AA1 2 ASP A 33 ? PHE A 38 ? ASP A 40 PHE A 45 AA1 3 ASP A 41 ? PRO A 42 ? ASP A 48 PRO A 49 AA2 1 VAL A 19 ? TRP A 20 ? VAL A 26 TRP A 27 AA2 2 ASP A 33 ? PHE A 38 ? ASP A 40 PHE A 45 AA2 3 THR A 71 ? SER A 78 ? THR A 78 SER A 85 AA2 4 THR A 83 ? SER A 90 ? THR A 90 SER A 97 AA3 1 VAL A 45 ? SER A 47 ? VAL A 52 SER A 54 AA3 2 SER A 53 ? PRO A 55 ? SER A 60 PRO A 62 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 20 ? N TRP A 27 O ASP A 33 ? O ASP A 40 AA1 2 3 N PHE A 38 ? N PHE A 45 O ASP A 41 ? O ASP A 48 AA2 1 2 N TRP A 20 ? N TRP A 27 O ASP A 33 ? O ASP A 40 AA2 2 3 N VAL A 36 ? N VAL A 43 O ASN A 75 ? O ASN A 82 AA2 3 4 N ILE A 76 ? N ILE A 83 O ARG A 85 ? O ARG A 92 AA3 1 2 N VAL A 46 ? N VAL A 53 O TYR A 54 ? O TYR A 61 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 101 ? 4 'binding site for residue EDO A 101' AC2 Software A CL 102 ? 6 'binding site for residue CL A 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 VAL A 19 ? VAL A 26 . ? 1_555 ? 2 AC1 4 GLN A 25 ? GLN A 32 . ? 6_765 ? 3 AC1 4 PHE A 32 ? PHE A 39 . ? 1_555 ? 4 AC1 4 TYR A 34 ? TYR A 41 . ? 1_555 ? 5 AC2 6 ASN A 48 ? ASN A 55 . ? 6_765 ? 6 AC2 6 HIS A 50 ? HIS A 57 . ? 6_765 ? 7 AC2 6 PHE A 52 ? PHE A 59 . ? 6_765 ? 8 AC2 6 SER A 90 ? SER A 97 . ? 1_555 ? 9 AC2 6 HOH D . ? HOH A 251 . ? 1_555 ? 10 AC2 6 HOH D . ? HOH A 262 . ? 1_555 ? # _atom_sites.entry_id 6G8Y _atom_sites.fract_transf_matrix[1][1] 0.018712 _atom_sites.fract_transf_matrix[1][2] 0.010803 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021606 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019637 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 8 8 ASP ASP A . n A 1 2 ASP 2 9 9 ASP ASP A . n A 1 3 ASP 3 10 10 ASP ASP A . n A 1 4 ASP 4 11 11 ASP ASP A . n A 1 5 LYS 5 12 12 LYS LYS A . n A 1 6 MET 6 13 13 MET MET A . n A 1 7 LEU 7 14 14 LEU LEU A . n A 1 8 GLU 8 15 15 GLU GLU A . n A 1 9 VAL 9 16 16 VAL VAL A . n A 1 10 LEU 10 17 17 LEU LEU A . n A 1 11 PHE 11 18 18 PHE PHE A . n A 1 12 GLN 12 19 19 GLN GLN A . n A 1 13 GLY 13 20 20 GLY GLY A . n A 1 14 PRO 14 21 21 PRO PRO A . n A 1 15 GLY 15 22 22 GLY GLY A . n A 1 16 LEU 16 23 23 LEU LEU A . n A 1 17 ARG 17 24 24 ARG ARG A . n A 1 18 ILE 18 25 25 ILE ILE A . n A 1 19 VAL 19 26 26 VAL VAL A . n A 1 20 TRP 20 27 27 TRP TRP A . n A 1 21 VAL 21 28 28 VAL VAL A . n A 1 22 ASP 22 29 29 ASP ASP A . n A 1 23 GLU 23 30 30 GLU GLU A . n A 1 24 MET 24 31 31 MET MET A . n A 1 25 GLN 25 32 32 GLN GLN A . n A 1 26 PHE 26 33 33 PHE PHE A . n A 1 27 GLN 27 34 34 GLN GLN A . n A 1 28 LEU 28 35 35 LEU LEU A . n A 1 29 GLN 29 36 36 GLN GLN A . n A 1 30 SER 30 37 37 SER SER A . n A 1 31 PHE 31 38 38 PHE PHE A . n A 1 32 PHE 32 39 39 PHE PHE A . n A 1 33 ASP 33 40 40 ASP ASP A . n A 1 34 TYR 34 41 41 TYR TYR A . n A 1 35 ILE 35 42 42 ILE ILE A . n A 1 36 VAL 36 43 43 VAL VAL A . n A 1 37 GLY 37 44 44 GLY GLY A . n A 1 38 PHE 38 45 45 PHE PHE A . n A 1 39 ASN 39 46 46 ASN ASN A . n A 1 40 ASP 40 47 47 ASP ASP A . n A 1 41 ASP 41 48 48 ASP ASP A . n A 1 42 PRO 42 49 49 PRO PRO A . n A 1 43 VAL 43 50 50 VAL VAL A . n A 1 44 PRO 44 51 51 PRO PRO A . n A 1 45 VAL 45 52 52 VAL VAL A . n A 1 46 VAL 46 53 53 VAL VAL A . n A 1 47 SER 47 54 54 SER SER A . n A 1 48 ASN 48 55 55 ASN ASN A . n A 1 49 GLN 49 56 56 GLN GLN A . n A 1 50 HIS 50 57 57 HIS HIS A . n A 1 51 GLY 51 58 58 GLY GLY A . n A 1 52 PHE 52 59 59 PHE PHE A . n A 1 53 SER 53 60 60 SER SER A . n A 1 54 TYR 54 61 61 TYR TYR A . n A 1 55 PRO 55 62 62 PRO PRO A . n A 1 56 ASP 56 63 63 ASP ASP A . n A 1 57 TYR 57 64 64 TYR TYR A . n A 1 58 ARG 58 65 65 ARG ARG A . n A 1 59 ARG 59 66 66 ARG ARG A . n A 1 60 ILE 60 67 67 ILE ILE A . n A 1 61 THR 61 68 68 THR THR A . n A 1 62 SER 62 69 69 SER SER A . n A 1 63 ILE 63 70 70 ILE ILE A . n A 1 64 PHE 64 71 71 PHE PHE A . n A 1 65 ASN 65 72 72 ASN ASN A . n A 1 66 GLU 66 73 73 GLU GLU A . n A 1 67 HIS 67 74 74 HIS HIS A . n A 1 68 CYS 68 75 75 CYS CYS A . n A 1 69 GLY 69 76 76 GLY GLY A . n A 1 70 ARG 70 77 77 ARG ARG A . n A 1 71 THR 71 78 78 THR THR A . n A 1 72 LEU 72 79 79 LEU LEU A . n A 1 73 LYS 73 80 80 LYS LYS A . n A 1 74 VAL 74 81 81 VAL VAL A . n A 1 75 ASN 75 82 82 ASN ASN A . n A 1 76 ILE 76 83 83 ILE ILE A . n A 1 77 TRP 77 84 84 TRP TRP A . n A 1 78 SER 78 85 85 SER SER A . n A 1 79 ALA 79 86 86 ALA ALA A . n A 1 80 LYS 80 87 87 LYS LYS A . n A 1 81 GLY 81 88 88 GLY GLY A . n A 1 82 GLY 82 89 89 GLY GLY A . n A 1 83 THR 83 90 90 THR THR A . n A 1 84 PHE 84 91 91 PHE PHE A . n A 1 85 ARG 85 92 92 ARG ARG A . n A 1 86 ASP 86 93 93 ASP ASP A . n A 1 87 GLU 87 94 94 GLU GLU A . n A 1 88 TYR 88 95 95 TYR TYR A . n A 1 89 ILE 89 96 96 ILE ILE A . n A 1 90 SER 90 97 97 SER SER A . n A 1 91 ILE 91 98 98 ILE ILE A . n A 1 92 ILE 92 99 99 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 101 1 EDO EDO A . C 3 CL 1 102 1 CL CL A . D 4 HOH 1 201 108 HOH HOH A . D 4 HOH 2 202 106 HOH HOH A . D 4 HOH 3 203 44 HOH HOH A . D 4 HOH 4 204 97 HOH HOH A . D 4 HOH 5 205 85 HOH HOH A . D 4 HOH 6 206 3 HOH HOH A . D 4 HOH 7 207 93 HOH HOH A . D 4 HOH 8 208 102 HOH HOH A . D 4 HOH 9 209 101 HOH HOH A . D 4 HOH 10 210 89 HOH HOH A . D 4 HOH 11 211 49 HOH HOH A . D 4 HOH 12 212 10 HOH HOH A . D 4 HOH 13 213 32 HOH HOH A . D 4 HOH 14 214 109 HOH HOH A . D 4 HOH 15 215 87 HOH HOH A . D 4 HOH 16 216 31 HOH HOH A . D 4 HOH 17 217 50 HOH HOH A . D 4 HOH 18 218 13 HOH HOH A . D 4 HOH 19 219 131 HOH HOH A . D 4 HOH 20 220 20 HOH HOH A . D 4 HOH 21 221 96 HOH HOH A . D 4 HOH 22 222 5 HOH HOH A . D 4 HOH 23 223 86 HOH HOH A . D 4 HOH 24 224 110 HOH HOH A . D 4 HOH 25 225 65 HOH HOH A . D 4 HOH 26 226 6 HOH HOH A . D 4 HOH 27 227 4 HOH HOH A . D 4 HOH 28 228 11 HOH HOH A . D 4 HOH 29 229 121 HOH HOH A . D 4 HOH 30 230 2 HOH HOH A . D 4 HOH 31 231 26 HOH HOH A . D 4 HOH 32 232 1 HOH HOH A . D 4 HOH 33 233 29 HOH HOH A . D 4 HOH 34 234 40 HOH HOH A . D 4 HOH 35 235 24 HOH HOH A . D 4 HOH 36 236 16 HOH HOH A . D 4 HOH 37 237 107 HOH HOH A . D 4 HOH 38 238 79 HOH HOH A . D 4 HOH 39 239 27 HOH HOH A . D 4 HOH 40 240 53 HOH HOH A . D 4 HOH 41 241 113 HOH HOH A . D 4 HOH 42 242 23 HOH HOH A . D 4 HOH 43 243 38 HOH HOH A . D 4 HOH 44 244 22 HOH HOH A . D 4 HOH 45 245 78 HOH HOH A . D 4 HOH 46 246 25 HOH HOH A . D 4 HOH 47 247 12 HOH HOH A . D 4 HOH 48 248 52 HOH HOH A . D 4 HOH 49 249 127 HOH HOH A . D 4 HOH 50 250 115 HOH HOH A . D 4 HOH 51 251 67 HOH HOH A . D 4 HOH 52 252 30 HOH HOH A . D 4 HOH 53 253 99 HOH HOH A . D 4 HOH 54 254 21 HOH HOH A . D 4 HOH 55 255 48 HOH HOH A . D 4 HOH 56 256 116 HOH HOH A . D 4 HOH 57 257 124 HOH HOH A . D 4 HOH 58 258 42 HOH HOH A . D 4 HOH 59 259 34 HOH HOH A . D 4 HOH 60 260 59 HOH HOH A . D 4 HOH 61 261 130 HOH HOH A . D 4 HOH 62 262 19 HOH HOH A . D 4 HOH 63 263 39 HOH HOH A . D 4 HOH 64 264 51 HOH HOH A . D 4 HOH 65 265 8 HOH HOH A . D 4 HOH 66 266 69 HOH HOH A . D 4 HOH 67 267 18 HOH HOH A . D 4 HOH 68 268 9 HOH HOH A . D 4 HOH 69 269 105 HOH HOH A . D 4 HOH 70 270 46 HOH HOH A . D 4 HOH 71 271 14 HOH HOH A . D 4 HOH 72 272 15 HOH HOH A . D 4 HOH 73 273 37 HOH HOH A . D 4 HOH 74 274 45 HOH HOH A . D 4 HOH 75 275 7 HOH HOH A . D 4 HOH 76 276 41 HOH HOH A . D 4 HOH 77 277 94 HOH HOH A . D 4 HOH 78 278 43 HOH HOH A . D 4 HOH 79 279 76 HOH HOH A . D 4 HOH 80 280 47 HOH HOH A . D 4 HOH 81 281 114 HOH HOH A . D 4 HOH 82 282 68 HOH HOH A . D 4 HOH 83 283 33 HOH HOH A . D 4 HOH 84 284 129 HOH HOH A . D 4 HOH 85 285 75 HOH HOH A . D 4 HOH 86 286 119 HOH HOH A . D 4 HOH 87 287 126 HOH HOH A . D 4 HOH 88 288 17 HOH HOH A . D 4 HOH 89 289 56 HOH HOH A . D 4 HOH 90 290 92 HOH HOH A . D 4 HOH 91 291 36 HOH HOH A . D 4 HOH 92 292 81 HOH HOH A . D 4 HOH 93 293 54 HOH HOH A . D 4 HOH 94 294 71 HOH HOH A . D 4 HOH 95 295 55 HOH HOH A . D 4 HOH 96 296 64 HOH HOH A . D 4 HOH 97 297 128 HOH HOH A . D 4 HOH 98 298 70 HOH HOH A . D 4 HOH 99 299 73 HOH HOH A . D 4 HOH 100 300 112 HOH HOH A . D 4 HOH 101 301 91 HOH HOH A . D 4 HOH 102 302 117 HOH HOH A . D 4 HOH 103 303 122 HOH HOH A . D 4 HOH 104 304 83 HOH HOH A . D 4 HOH 105 305 123 HOH HOH A . D 4 HOH 106 306 120 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE -4 ? 1 'SSA (A^2)' 6320 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 289 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-24 2 'Structure model' 1 1 2020-05-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.year' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Auto-Rickshaw ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 206 ? ? O A HOH 262 ? ? 2.15 2 1 OE2 A GLU 73 ? ? O A HOH 201 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 269 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 269 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_555 _pdbx_validate_symm_contact.dist 1.59 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #