HEADER MEMBRANE PROTEIN 11-APR-18 6GAB TITLE BACTERIORHODOPSIN, 460 FS STATE, REAL-SPACE REFINED AGAINST 15% TITLE 2 EXTRAPOLATED STRUCTURE FACTORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BR,BACTERIOOPSIN,BO; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM NRC-1; SOURCE 3 ORGANISM_COMMON: HALOBACTERIUM HALOBIUM; SOURCE 4 ORGANISM_TAXID: 64091; SOURCE 5 STRAIN: ATCC 700922 / JCM 11081 / NRC-1; SOURCE 6 GENE: BOP, VNG_1467G; SOURCE 7 EXPRESSION_SYSTEM: HALOBACTERIUM SALINARUM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 2242 KEYWDS MEMBRANE PROTEIN, PROTON PUMP, TIME-RESOLVED CRYSTALLOGRAPHY, FREE- KEYWDS 2 ELECTRON LASER EXPDTA X-RAY DIFFRACTION AUTHOR G.NASS KOVACS,J.-P.COLLETIER,M.L.GRUENBEIN,T.STENSITZKI,A.BATYUK, AUTHOR 2 S.CARBAJO,R.B.DOAK,D.EHRENBERG,L.FOUCAR,R.GASPER,A.GOREL,M.HILPERT, AUTHOR 3 M.KLOOS,J.KOGLIN,J.REINSTEIN,C.M.ROOME,R.SCHLESINGER,M.SEABERG, AUTHOR 4 R.L.SHOEMAN,M.STRICKER,S.BOUTET,S.HAACKE,J.HEBERLE,T.DOMRATCHEVA, AUTHOR 5 I.SCHLICHTING REVDAT 3 06-NOV-24 6GAB 1 REMARK REVDAT 2 31-JUL-19 6GAB 1 JRNL REVDAT 1 24-APR-19 6GAB 0 JRNL AUTH G.NASS KOVACS,J.P.COLLETIER,M.L.GRUNBEIN,Y.YANG, JRNL AUTH 2 T.STENSITZKI,A.BATYUK,S.CARBAJO,R.B.DOAK,D.EHRENBERG, JRNL AUTH 3 L.FOUCAR,R.GASPER,A.GOREL,M.HILPERT,M.KLOOS,J.E.KOGLIN, JRNL AUTH 4 J.REINSTEIN,C.M.ROOME,R.SCHLESINGER,M.SEABERG,R.L.SHOEMAN, JRNL AUTH 5 M.STRICKER,S.BOUTET,S.HAACKE,J.HEBERLE,K.HEYNE, JRNL AUTH 6 T.DOMRATCHEVA,T.R.M.BARENDS,I.SCHLICHTING JRNL TITL THREE-DIMENSIONAL VIEW OF ULTRAFAST DYNAMICS IN PHOTOEXCITED JRNL TITL 2 BACTERIORHODOPSIN. JRNL REF NAT COMMUN V. 10 3177 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31320619 JRNL DOI 10.1038/S41467-019-10758-0 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3063: REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 22397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: A MOLECULE IS THE DARK STATE REMARK 3 B MOLECULE WAS REAL-SPACE REFINED AGAINST MAP CALCULATED FROM REMARK 3 EXTRAPOLATED STRUCTURE FACTORS (AT 15% OCCUPANCY) REMARK 3 MODEL/MAP FIT (CCMASK)=0.8387 REMARK 4 REMARK 4 6GAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-APR-18. REMARK 100 THE DEPOSITION ID IS D_1200009650. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : CXI REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE CXI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.26 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : CS-PAD CXI-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22397 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 21.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 138.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% (W/V) PEG 2000, 0.1 M K2HPO4 REMARK 280 /NAH2PO4, PH 5.6, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.25000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.25000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.25000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -62.10000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -31.05000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -53.78018 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 435 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 436 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 ALA A 235 REMARK 465 PRO A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 SER A 239 REMARK 465 ALA A 240 REMARK 465 GLY A 241 REMARK 465 ASP A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 ALA A 245 REMARK 465 ALA A 246 REMARK 465 THR A 247 REMARK 465 SER A 248 REMARK 465 ASP A 249 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 163 -168.43 -100.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 436 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 437 DISTANCE = 8.38 ANGSTROMS REMARK 525 HOH A 438 DISTANCE = 8.83 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 L2P A 302 REMARK 610 L2P A 310 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RET A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L2P A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRD A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D10 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HP6 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OCT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UND A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L2P A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L2P A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DD9 A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C14 A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OCT A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UND A 315 DBREF 6GAB A 1 249 UNP P02945 BACR_HALSA 14 262 SEQRES 1 A 249 GLN ALA GLN ILE THR GLY ARG PRO GLU TRP ILE TRP LEU SEQRES 2 A 249 ALA LEU GLY THR ALA LEU MET GLY LEU GLY THR LEU TYR SEQRES 3 A 249 PHE LEU VAL LYS GLY MET GLY VAL SER ASP PRO ASP ALA SEQRES 4 A 249 LYS LYS PHE TYR ALA ILE THR THR LEU VAL PRO ALA ILE SEQRES 5 A 249 ALA PHE THR MET TYR LEU SER MET LEU LEU GLY TYR GLY SEQRES 6 A 249 LEU THR MET VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE SEQRES 7 A 249 TYR TRP ALA ARG TYR ALA ASP TRP LEU PHE THR THR PRO SEQRES 8 A 249 LEU LEU LEU LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP SEQRES 9 A 249 GLN GLY THR ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE SEQRES 10 A 249 MET ILE GLY THR GLY LEU VAL GLY ALA LEU THR LYS VAL SEQRES 11 A 249 TYR SER TYR ARG PHE VAL TRP TRP ALA ILE SER THR ALA SEQRES 12 A 249 ALA MET LEU TYR ILE LEU TYR VAL LEU PHE PHE GLY PHE SEQRES 13 A 249 THR SER LYS ALA GLU SER MET ARG PRO GLU VAL ALA SER SEQRES 14 A 249 THR PHE LYS VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SEQRES 15 A 249 SER ALA TYR PRO VAL VAL TRP LEU ILE GLY SER GLU GLY SEQRES 16 A 249 ALA GLY ILE VAL PRO LEU ASN ILE GLU THR LEU LEU PHE SEQRES 17 A 249 MET VAL LEU ASP VAL SER ALA LYS VAL GLY PHE GLY LEU SEQRES 18 A 249 ILE LEU LEU ARG SER ARG ALA ILE PHE GLY GLU ALA GLU SEQRES 19 A 249 ALA PRO GLU PRO SER ALA GLY ASP GLY ALA ALA ALA THR SEQRES 20 A 249 SER ASP HET RET A 301 40 HET L2P A 302 25 HET TRD A 303 13 HET D10 A 304 10 HET HP6 A 305 7 HET OCT A 306 8 HET OCT A 307 8 HET MYS A 308 15 HET UND A 309 11 HET L2P A 310 22 HET L2P A 311 46 HET DD9 A 312 9 HET C14 A 313 14 HET OCT A 314 8 HET UND A 315 11 HETNAM RET RETINAL HETNAM L2P 2,3-DI-PHYTANYL-GLYCEROL HETNAM TRD TRIDECANE HETNAM D10 DECANE HETNAM HP6 HEPTANE HETNAM OCT N-OCTANE HETNAM MYS PENTADECANE HETNAM UND UNDECANE HETNAM DD9 NONANE HETNAM C14 TETRADECANE HETSYN L2P 1,2-DI-1-(3,7,11,15-TETRAMETHYL-HEXADECANE)-SN-GLYCEROL HETSYN TRD LIPID FRAGMENT HETSYN UND LIPID FRAGMENT FORMUL 2 RET C20 H28 O FORMUL 3 L2P 3(C43 H88 O3) FORMUL 4 TRD C13 H28 FORMUL 5 D10 C10 H22 FORMUL 6 HP6 C7 H16 FORMUL 7 OCT 3(C8 H18) FORMUL 9 MYS C15 H32 FORMUL 10 UND 2(C11 H24) FORMUL 13 DD9 C9 H20 FORMUL 14 C14 C14 H30 FORMUL 17 HOH *38(H2 O) HELIX 1 AA1 GLU A 9 GLY A 31 1 23 HELIX 2 AA2 ASP A 36 LEU A 62 1 27 HELIX 3 AA3 TRP A 80 VAL A 101 1 22 HELIX 4 AA4 ASP A 104 THR A 128 1 25 HELIX 5 AA5 VAL A 130 GLY A 155 1 26 HELIX 6 AA6 PHE A 156 GLU A 161 1 6 HELIX 7 AA7 ARG A 164 GLY A 192 1 29 HELIX 8 AA8 PRO A 200 ARG A 225 1 26 HELIX 9 AA9 SER A 226 PHE A 230 5 5 SHEET 1 AA1 2 LEU A 66 PHE A 71 0 SHEET 2 AA1 2 GLU A 74 TYR A 79 -1 O ILE A 78 N THR A 67 LINK NZ ALYS A 216 C15ARET A 301 1555 1555 1.34 LINK NZ BLYS A 216 C15BRET A 301 1555 1555 1.30 SITE 1 AC1 11 TRP A 86 THR A 90 TRP A 138 SER A 141 SITE 2 AC1 11 THR A 142 TRP A 182 TYR A 185 PRO A 186 SITE 3 AC1 11 TRP A 189 ASP A 212 LYS A 216 SITE 1 AC2 7 LEU A 25 LYS A 40 ALA A 44 THR A 47 SITE 2 AC2 7 LEU A 48 PHE A 54 TYR A 147 SITE 1 AC3 4 MET A 145 LEU A 146 LEU A 149 SER A 183 SITE 1 AC4 4 THR A 17 LEU A 22 HP6 A 305 HOH A 438 SITE 1 AC5 1 D10 A 304 SITE 1 AC6 1 ASN A 176 SITE 1 AC7 1 HOH A 432 SITE 1 AC8 1 L2P A 310 SITE 1 AC9 6 TYR A 131 PHE A 135 TRP A 138 ALA A 139 SITE 2 AC9 6 VAL A 210 UND A 309 SITE 1 AD1 10 ILE A 52 MET A 56 TYR A 64 TRP A 80 SITE 2 AD1 10 ALA A 84 PHE A 88 GLY A 116 LEU A 123 SITE 3 AD1 10 VAL A 124 C14 A 313 SITE 1 AD2 3 GLY A 218 LEU A 221 ARG A 225 SITE 1 AD3 4 LEU A 87 PRO A 91 LEU A 95 L2P A 311 SITE 1 AD4 1 TYR A 26 SITE 1 AD5 1 TYR A 150 CRYST1 62.100 62.100 110.500 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016103 0.009297 0.000000 0.00000 SCALE2 0.000000 0.018594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009050 0.00000 CONECT 3299 3604 CONECT 3300 3605 CONECT 3576 3578 3586 3606 3608 CONECT 3577 3579 3587 3607 3609 CONECT 3578 3576 3580 CONECT 3579 3577 3581 CONECT 3580 3578 3582 CONECT 3581 3579 3583 CONECT 3582 3580 3584 CONECT 3583 3581 3585 CONECT 3584 3582 3586 3610 CONECT 3585 3583 3587 3611 CONECT 3586 3576 3584 3588 CONECT 3587 3577 3585 3589 CONECT 3588 3586 3590 CONECT 3589 3587 3591 CONECT 3590 3588 3592 CONECT 3591 3589 3593 CONECT 3592 3590 3594 3612 CONECT 3593 3591 3595 3613 CONECT 3594 3592 3596 CONECT 3595 3593 3597 CONECT 3596 3594 3598 CONECT 3597 3595 3599 CONECT 3598 3596 3600 CONECT 3599 3597 3601 CONECT 3600 3598 3602 3614 CONECT 3601 3599 3603 3615 CONECT 3602 3600 3604 CONECT 3603 3601 3605 CONECT 3604 3299 3602 CONECT 3605 3300 3603 CONECT 3606 3576 CONECT 3607 3577 CONECT 3608 3576 CONECT 3609 3577 CONECT 3610 3584 CONECT 3611 3585 CONECT 3612 3592 CONECT 3613 3593 CONECT 3614 3600 CONECT 3615 3601 CONECT 3616 3617 3618 CONECT 3617 3616 3620 CONECT 3618 3616 3619 CONECT 3619 3618 3621 CONECT 3620 3617 CONECT 3621 3619 3622 CONECT 3622 3621 3623 CONECT 3623 3622 3624 3625 CONECT 3624 3623 CONECT 3625 3623 3626 CONECT 3626 3625 3627 CONECT 3627 3626 3628 CONECT 3628 3627 3629 3630 CONECT 3629 3628 CONECT 3630 3628 3631 CONECT 3631 3630 3632 CONECT 3632 3631 3633 CONECT 3633 3632 3634 3635 CONECT 3634 3633 CONECT 3635 3633 3636 CONECT 3636 3635 3637 CONECT 3637 3636 3638 CONECT 3638 3637 3639 3640 CONECT 3639 3638 CONECT 3640 3638 CONECT 3641 3642 CONECT 3642 3641 3643 CONECT 3643 3642 3644 CONECT 3644 3643 3645 CONECT 3645 3644 3646 CONECT 3646 3645 3647 CONECT 3647 3646 3648 CONECT 3648 3647 3649 CONECT 3649 3648 3650 CONECT 3650 3649 3651 CONECT 3651 3650 3652 CONECT 3652 3651 3653 CONECT 3653 3652 CONECT 3654 3655 CONECT 3655 3654 3656 CONECT 3656 3655 3657 CONECT 3657 3656 3658 CONECT 3658 3657 3659 CONECT 3659 3658 3660 CONECT 3660 3659 3661 CONECT 3661 3660 3662 CONECT 3662 3661 3663 CONECT 3663 3662 CONECT 3664 3665 CONECT 3665 3664 3666 CONECT 3666 3665 3667 CONECT 3667 3666 3668 CONECT 3668 3667 3669 CONECT 3669 3668 3670 CONECT 3670 3669 CONECT 3671 3672 CONECT 3672 3671 3673 CONECT 3673 3672 3674 CONECT 3674 3673 3675 CONECT 3675 3674 3676 CONECT 3676 3675 3677 CONECT 3677 3676 3678 CONECT 3678 3677 CONECT 3679 3680 CONECT 3680 3679 3681 CONECT 3681 3680 3682 CONECT 3682 3681 3683 CONECT 3683 3682 3684 CONECT 3684 3683 3685 CONECT 3685 3684 3686 CONECT 3686 3685 CONECT 3687 3688 CONECT 3688 3687 3689 CONECT 3689 3688 3690 CONECT 3690 3689 3691 CONECT 3691 3690 3692 CONECT 3692 3691 3693 CONECT 3693 3692 3694 CONECT 3694 3693 3695 CONECT 3695 3694 3696 CONECT 3696 3695 3697 CONECT 3697 3696 3698 CONECT 3698 3697 3699 CONECT 3699 3698 3700 CONECT 3700 3699 3701 CONECT 3701 3700 CONECT 3702 3703 CONECT 3703 3702 3704 CONECT 3704 3703 3705 CONECT 3705 3704 3706 CONECT 3706 3705 3707 CONECT 3707 3706 3708 CONECT 3708 3707 3709 CONECT 3709 3708 3710 CONECT 3710 3709 3711 CONECT 3711 3710 3712 CONECT 3712 3711 CONECT 3713 3714 CONECT 3714 3713 3715 CONECT 3715 3714 3716 CONECT 3716 3715 3717 CONECT 3717 3716 3718 3719 CONECT 3718 3717 CONECT 3719 3717 3720 CONECT 3720 3719 3721 CONECT 3721 3720 3722 CONECT 3722 3721 3723 3724 CONECT 3723 3722 CONECT 3724 3722 3725 CONECT 3725 3724 3726 CONECT 3726 3725 3727 CONECT 3727 3726 3728 3729 CONECT 3728 3727 CONECT 3729 3727 3730 CONECT 3730 3729 3731 CONECT 3731 3730 3732 CONECT 3732 3731 3733 3734 CONECT 3733 3732 CONECT 3734 3732 CONECT 3735 3736 3737 CONECT 3736 3735 3741 CONECT 3737 3735 3738 3739 CONECT 3738 3737 3761 CONECT 3739 3737 3740 CONECT 3740 3739 CONECT 3741 3736 3742 CONECT 3742 3741 3743 CONECT 3743 3742 3744 3745 CONECT 3744 3743 CONECT 3745 3743 3746 CONECT 3746 3745 3747 CONECT 3747 3746 3748 CONECT 3748 3747 3749 3750 CONECT 3749 3748 CONECT 3750 3748 3751 CONECT 3751 3750 3752 CONECT 3752 3751 3753 CONECT 3753 3752 3754 3755 CONECT 3754 3753 CONECT 3755 3753 3756 CONECT 3756 3755 3757 CONECT 3757 3756 3758 CONECT 3758 3757 3759 3760 CONECT 3759 3758 CONECT 3760 3758 CONECT 3761 3738 3762 CONECT 3762 3761 3763 CONECT 3763 3762 3764 3765 CONECT 3764 3763 CONECT 3765 3763 3766 CONECT 3766 3765 3767 CONECT 3767 3766 3768 CONECT 3768 3767 3769 3770 CONECT 3769 3768 CONECT 3770 3768 3771 CONECT 3771 3770 3772 CONECT 3772 3771 3773 CONECT 3773 3772 3774 3775 CONECT 3774 3773 CONECT 3775 3773 3776 CONECT 3776 3775 3777 CONECT 3777 3776 3778 CONECT 3778 3777 3779 3780 CONECT 3779 3778 CONECT 3780 3778 CONECT 3781 3782 CONECT 3782 3781 3783 CONECT 3783 3782 3784 CONECT 3784 3783 3785 CONECT 3785 3784 3786 CONECT 3786 3785 3787 CONECT 3787 3786 3788 CONECT 3788 3787 3789 CONECT 3789 3788 CONECT 3790 3791 CONECT 3791 3790 3792 CONECT 3792 3791 3793 CONECT 3793 3792 3794 CONECT 3794 3793 3795 CONECT 3795 3794 3796 CONECT 3796 3795 3797 CONECT 3797 3796 3798 CONECT 3798 3797 3799 CONECT 3799 3798 3800 CONECT 3800 3799 3801 CONECT 3801 3800 3802 CONECT 3802 3801 3803 CONECT 3803 3802 CONECT 3804 3805 CONECT 3805 3804 3806 CONECT 3806 3805 3807 CONECT 3807 3806 3808 CONECT 3808 3807 3809 CONECT 3809 3808 3810 CONECT 3810 3809 3811 CONECT 3811 3810 CONECT 3812 3813 CONECT 3813 3812 3814 CONECT 3814 3813 3815 CONECT 3815 3814 3816 CONECT 3816 3815 3817 CONECT 3817 3816 3818 CONECT 3818 3817 3819 CONECT 3819 3818 3820 CONECT 3820 3819 3821 CONECT 3821 3820 3822 CONECT 3822 3821 MASTER 340 0 15 9 2 0 20 6 2052 1 249 20 END