HEADER MEMBRANE PROTEIN 23-APR-18 6GDI TITLE STRUCTURE OF P-GLYCOPROTEIN(ABCB1) IN THE POST-HYDROLYTIC STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTIDRUG RESISTANCE PROTEIN 1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 1A,MDR1A,MULTIDRUG COMPND 5 RESISTANCE PROTEIN 3,P-GLYCOPROTEIN 3; COMPND 6 EC: 3.6.3.44; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ABCB1A, ABCB4, MDR1A, MDR3, PGY-3, PGY3; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS P-GLYCOPROTEIN; ABCB1; ATP-BINDING CASSETTE; TRANSPORTER; MEMBRANE KEYWDS 2 PROTEIN; PROTEIN STRUCTURE, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR R.C.FORD,N.THONGHIN,R.F.COLLINS,A.BARBIERI,T.SHAFI,A.SIEBERT REVDAT 3 15-MAY-24 6GDI 1 REMARK REVDAT 2 03-APR-19 6GDI 1 JRNL REVDAT 1 23-MAY-18 6GDI 0 JRNL AUTH N.THONGHIN,R.F.COLLINS,A.BARBIERI,T.SHAFI,A.SIEBERT,R.C.FORD JRNL TITL NOVEL FEATURES IN THE STRUCTURE OF P-GLYCOPROTEIN (ABCB1) IN JRNL TITL 2 THE POST-HYDROLYTIC STATE AS DETERMINED AT 7.9 ANGSTROM JRNL TITL 3 RESOLUTION. JRNL REF BMC STRUCT.BIOL. V. 18 17 2018 JRNL REFN ESSN 1472-6807 JRNL PMID 30545335 JRNL DOI 10.1186/S12900-018-0098-Z REMARK 2 REMARK 2 RESOLUTION. 7.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, GCTF, NAMD REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 4KSB REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 7.900 REMARK 3 NUMBER OF PARTICLES : 135357 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6GDI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-APR-18. REMARK 100 THE DEPOSITION ID IS D_1200009786. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MOUSE P-GLYCOPROTEIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.10 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 7000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 ASP A 6 REMARK 465 LEU A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 ARG A 10 REMARK 465 ALA A 11 REMARK 465 ASP A 12 REMARK 465 LYS A 13 REMARK 465 ASN A 14 REMARK 465 PHE A 15 REMARK 465 SER A 16 REMARK 465 LYS A 17 REMARK 465 MET A 18 REMARK 465 GLY A 19 REMARK 465 LYS A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 LYS A 23 REMARK 465 LYS A 24 REMARK 465 GLU A 25 REMARK 465 LYS A 26 REMARK 465 LYS A 27 REMARK 465 GLU A 28 REMARK 465 LYS A 29 REMARK 465 LYS A 30 REMARK 465 PRO A 31 REMARK 465 ALA A 32 REMARK 465 ALA A 627 REMARK 465 GLY A 628 REMARK 465 ASN A 629 REMARK 465 GLU A 630 REMARK 465 ILE A 631 REMARK 465 GLU A 632 REMARK 465 LEU A 633 REMARK 465 GLY A 634 REMARK 465 ASN A 635 REMARK 465 GLU A 636 REMARK 465 ALA A 637 REMARK 465 CYS A 638 REMARK 465 LYS A 639 REMARK 465 SER A 640 REMARK 465 LYS A 641 REMARK 465 ASP A 642 REMARK 465 GLU A 643 REMARK 465 ILE A 644 REMARK 465 ASP A 645 REMARK 465 ASN A 646 REMARK 465 LEU A 647 REMARK 465 ASP A 648 REMARK 465 MET A 649 REMARK 465 SER A 650 REMARK 465 SER A 651 REMARK 465 LYS A 652 REMARK 465 ASP A 653 REMARK 465 SER A 654 REMARK 465 GLY A 655 REMARK 465 SER A 656 REMARK 465 SER A 657 REMARK 465 LEU A 658 REMARK 465 ILE A 659 REMARK 465 ARG A 660 REMARK 465 ARG A 661 REMARK 465 ARG A 662 REMARK 465 SER A 663 REMARK 465 THR A 664 REMARK 465 ARG A 665 REMARK 465 LYS A 666 REMARK 465 SER A 667 REMARK 465 ILE A 668 REMARK 465 CYS A 669 REMARK 465 GLY A 670 REMARK 465 PRO A 671 REMARK 465 HIS A 672 REMARK 465 ASP A 673 REMARK 465 GLN A 674 REMARK 465 ASP A 675 REMARK 465 ARG A 676 REMARK 465 LYS A 677 REMARK 465 LEU A 678 REMARK 465 SER A 679 REMARK 465 THR A 680 REMARK 465 LYS A 681 REMARK 465 GLU A 682 REMARK 465 ALA A 683 REMARK 465 GLY A 1272 REMARK 465 ALA A 1273 REMARK 465 LYS A 1274 REMARK 465 ARG A 1275 REMARK 465 SER A 1276 REMARK 465 LEU A 1277 REMARK 465 GLU A 1278 REMARK 465 HIS A 1279 REMARK 465 HIS A 1280 REMARK 465 HIS A 1281 REMARK 465 HIS A 1282 REMARK 465 HIS A 1283 REMARK 465 HIS A 1284 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 71 CA PHE A 71 CB 0.133 REMARK 500 TYR A 110 CG TYR A 110 CD1 0.078 REMARK 500 SER A 130 CA SER A 130 CB 0.100 REMARK 500 ARG A 144 CZ ARG A 144 NH2 0.081 REMARK 500 ARG A 170 NE ARG A 170 CZ 0.089 REMARK 500 PHE A 299 CG PHE A 299 CD1 0.095 REMARK 500 ARG A 463 NE ARG A 463 CZ 0.080 REMARK 500 GLU A 464 CG GLU A 464 CD 0.099 REMARK 500 PHE A 619 CA PHE A 619 CB 0.138 REMARK 500 TYR A 706 CG TYR A 706 CD1 0.082 REMARK 500 PHE A 751 CB PHE A 751 CG 0.106 REMARK 500 SER A 798 CA SER A 798 CB 0.100 REMARK 500 GLU A 885 CG GLU A 885 CD 0.100 REMARK 500 SER A1045 CA SER A1045 CB 0.110 REMARK 500 GLY A1251 CA GLY A1251 C -0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 46 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 TYR A 49 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 PHE A 71 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 PHE A 71 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ASP A 76 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 GLU A 93 N - CA - CB ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG A 97 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 97 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 TYR A 110 CB - CG - CD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 TYR A 110 CB - CG - CD1 ANGL. DEV. = 5.1 DEGREES REMARK 500 TYR A 113 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 TYR A 113 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 TYR A 114 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR A 114 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 TRP A 132 CA - CB - CG ANGL. DEV. = 13.5 DEGREES REMARK 500 PHE A 190 CB - CG - CD1 ANGL. DEV. = -5.3 DEGREES REMARK 500 MET A 193 CG - SD - CE ANGL. DEV. = 11.9 DEGREES REMARK 500 PHE A 196 CG - CD1 - CE1 ANGL. DEV. = -7.4 DEGREES REMARK 500 PHE A 200 CB - CG - CD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 206 N - CA - CB ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG A 206 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 TRP A 228 CB - CG - CD2 ANGL. DEV. = 9.7 DEGREES REMARK 500 TRP A 228 CB - CG - CD1 ANGL. DEV. = -9.1 DEGREES REMARK 500 PHE A 235 CB - CG - CD2 ANGL. DEV. = 8.0 DEGREES REMARK 500 ARG A 258 CG - CD - NE ANGL. DEV. = -12.6 DEGREES REMARK 500 ARG A 258 CD - NE - CZ ANGL. DEV. = -8.6 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 258 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 TYR A 273 CB - CG - CD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 282 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 282 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 TYR A 306 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 PHE A 310 CG - CD2 - CE2 ANGL. DEV. = -7.1 DEGREES REMARK 500 TYR A 312 CB - CG - CD2 ANGL. DEV. = 9.7 DEGREES REMARK 500 TYR A 312 CB - CG - CD1 ANGL. DEV. = -11.1 DEGREES REMARK 500 PHE A 339 CB - CG - CD1 ANGL. DEV. = -5.9 DEGREES REMARK 500 TYR A 359 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 PHE A 362 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 400 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 LYS A 414 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 ARG A 438 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 455 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 455 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 460 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 460 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 TYR A 461 CB - CG - CD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 463 NE - CZ - NH1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG A 463 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 PHE A 476 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 PHE A 476 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 123 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 36 -12.82 -163.38 REMARK 500 THR A 37 -77.58 -84.48 REMARK 500 SER A 88 -73.70 -80.31 REMARK 500 ASN A 90 -51.29 -176.62 REMARK 500 SER A 92 27.95 170.07 REMARK 500 GLU A 93 -67.54 -123.14 REMARK 500 ARG A 97 -77.81 -93.54 REMARK 500 TYR A 113 -62.68 -90.52 REMARK 500 CYS A 133 -72.78 -109.73 REMARK 500 GLU A 155 -117.36 48.29 REMARK 500 HIS A 162 -176.28 56.20 REMARK 500 PHE A 196 -71.93 -82.09 REMARK 500 VAL A 317 -62.27 -108.88 REMARK 500 LYS A 320 -116.14 -139.10 REMARK 500 GLU A 321 109.49 160.56 REMARK 500 TYR A 322 -23.61 -145.56 REMARK 500 ASN A 367 169.02 60.72 REMARK 500 SER A 377 124.12 64.88 REMARK 500 HIS A 379 138.86 173.58 REMARK 500 ASP A 382 38.62 85.45 REMARK 500 GLN A 385 176.70 61.76 REMARK 500 GLN A 404 101.19 59.64 REMARK 500 LEU A 409 129.77 177.83 REMARK 500 ASP A 450 -144.82 56.31 REMARK 500 ASP A 453 -141.26 -94.27 REMARK 500 ARG A 455 22.40 165.27 REMARK 500 THR A 456 -3.01 -142.05 REMARK 500 HIS A 514 8.45 107.23 REMARK 500 GLN A 515 -129.57 58.63 REMARK 500 GLU A 522 -112.44 71.01 REMARK 500 ARG A 523 43.27 -144.95 REMARK 500 ALA A 525 -47.20 -166.41 REMARK 500 ASN A 544 75.60 38.31 REMARK 500 THR A 554 23.87 -143.59 REMARK 500 GLU A 574 17.44 -142.33 REMARK 500 VAL A 603 -56.64 -133.23 REMARK 500 LYS A 615 44.21 70.03 REMARK 500 ASP A 687 31.49 95.70 REMARK 500 TRP A 694 23.62 86.90 REMARK 500 PHE A 707 65.62 127.71 REMARK 500 GLU A 742 -27.72 84.77 REMARK 500 PHE A 755 -70.04 -76.34 REMARK 500 LEU A 758 -75.78 -97.11 REMARK 500 VAL A 797 111.16 83.64 REMARK 500 PHE A 800 2.46 -169.15 REMARK 500 THR A 806 150.45 -42.05 REMARK 500 ASN A 838 -72.34 -104.60 REMARK 500 ILE A 860 -68.67 -103.88 REMARK 500 LEU A 906 -37.82 78.54 REMARK 500 ALA A 957 -142.35 -89.59 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 40 0.16 SIDE CHAIN REMARK 500 TYR A 49 0.09 SIDE CHAIN REMARK 500 TYR A 126 0.10 SIDE CHAIN REMARK 500 PHE A 204 0.09 SIDE CHAIN REMARK 500 TYR A 243 0.08 SIDE CHAIN REMARK 500 TYR A 322 0.07 SIDE CHAIN REMARK 500 TYR A 359 0.08 SIDE CHAIN REMARK 500 ARG A 438 0.10 SIDE CHAIN REMARK 500 PHE A 516 0.09 SIDE CHAIN REMARK 500 ARG A 539 0.12 SIDE CHAIN REMARK 500 ARG A 589 0.11 SIDE CHAIN REMARK 500 PHE A 597 0.12 SIDE CHAIN REMARK 500 PHE A 619 0.09 SIDE CHAIN REMARK 500 ARG A 813 0.10 SIDE CHAIN REMARK 500 ARG A 828 0.09 SIDE CHAIN REMARK 500 PHE A 900 0.07 SIDE CHAIN REMARK 500 TYR A 916 0.08 SIDE CHAIN REMARK 500 PHE A 947 0.07 SIDE CHAIN REMARK 500 PHE A 955 0.09 SIDE CHAIN REMARK 500 PHE A 990 0.08 SIDE CHAIN REMARK 500 TYR A1138 0.10 SIDE CHAIN REMARK 500 TYR A1161 0.10 SIDE CHAIN REMARK 500 ARG A1184 0.12 SIDE CHAIN REMARK 500 ARG A1218 0.10 SIDE CHAIN REMARK 500 TYR A1263 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-4391 RELATED DB: EMDB REMARK 900 STRUCTURE OF P-GLYCOPROTEIN(ABCB1) IN THE POST-HYDROLYTIC STATE DBREF 6GDI A 1 1276 UNP P21447 MDR1A_MOUSE 1 1276 SEQADV 6GDI LEU A 1277 UNP P21447 EXPRESSION TAG SEQADV 6GDI GLU A 1278 UNP P21447 EXPRESSION TAG SEQADV 6GDI HIS A 1279 UNP P21447 EXPRESSION TAG SEQADV 6GDI HIS A 1280 UNP P21447 EXPRESSION TAG SEQADV 6GDI HIS A 1281 UNP P21447 EXPRESSION TAG SEQADV 6GDI HIS A 1282 UNP P21447 EXPRESSION TAG SEQADV 6GDI HIS A 1283 UNP P21447 EXPRESSION TAG SEQADV 6GDI HIS A 1284 UNP P21447 EXPRESSION TAG SEQRES 1 A 1284 MET GLU LEU GLU GLU ASP LEU LYS GLY ARG ALA ASP LYS SEQRES 2 A 1284 ASN PHE SER LYS MET GLY LYS LYS SER LYS LYS GLU LYS SEQRES 3 A 1284 LYS GLU LYS LYS PRO ALA VAL SER VAL LEU THR MET PHE SEQRES 4 A 1284 ARG TYR ALA GLY TRP LEU ASP ARG LEU TYR MET LEU VAL SEQRES 5 A 1284 GLY THR LEU ALA ALA ILE ILE HIS GLY VAL ALA LEU PRO SEQRES 6 A 1284 LEU MET MET LEU ILE PHE GLY ASP MET THR ASP SER PHE SEQRES 7 A 1284 ALA SER VAL GLY ASN VAL SER LYS ASN SER THR ASN MET SEQRES 8 A 1284 SER GLU ALA ASP LYS ARG ALA MET PHE ALA LYS LEU GLU SEQRES 9 A 1284 GLU GLU MET THR THR TYR ALA TYR TYR TYR THR GLY ILE SEQRES 10 A 1284 GLY ALA GLY VAL LEU ILE VAL ALA TYR ILE GLN VAL SER SEQRES 11 A 1284 PHE TRP CYS LEU ALA ALA GLY ARG GLN ILE HIS LYS ILE SEQRES 12 A 1284 ARG GLN LYS PHE PHE HIS ALA ILE MET ASN GLN GLU ILE SEQRES 13 A 1284 GLY TRP PHE ASP VAL HIS ASP VAL GLY GLU LEU ASN THR SEQRES 14 A 1284 ARG LEU THR ASP ASP VAL SER LYS ILE ASN GLU GLY ILE SEQRES 15 A 1284 GLY ASP LYS ILE GLY MET PHE PHE GLN ALA MET ALA THR SEQRES 16 A 1284 PHE PHE GLY GLY PHE ILE ILE GLY PHE THR ARG GLY TRP SEQRES 17 A 1284 LYS LEU THR LEU VAL ILE LEU ALA ILE SER PRO VAL LEU SEQRES 18 A 1284 GLY LEU SER ALA GLY ILE TRP ALA LYS ILE LEU SER SER SEQRES 19 A 1284 PHE THR ASP LYS GLU LEU HIS ALA TYR ALA LYS ALA GLY SEQRES 20 A 1284 ALA VAL ALA GLU GLU VAL LEU ALA ALA ILE ARG THR VAL SEQRES 21 A 1284 ILE ALA PHE GLY GLY GLN LYS LYS GLU LEU GLU ARG TYR SEQRES 22 A 1284 ASN ASN ASN LEU GLU GLU ALA LYS ARG LEU GLY ILE LYS SEQRES 23 A 1284 LYS ALA ILE THR ALA ASN ILE SER MET GLY ALA ALA PHE SEQRES 24 A 1284 LEU LEU ILE TYR ALA SER TYR ALA LEU ALA PHE TRP TYR SEQRES 25 A 1284 GLY THR SER LEU VAL ILE SER LYS GLU TYR SER ILE GLY SEQRES 26 A 1284 GLN VAL LEU THR VAL PHE PHE SER VAL LEU ILE GLY ALA SEQRES 27 A 1284 PHE SER VAL GLY GLN ALA SER PRO ASN ILE GLU ALA PHE SEQRES 28 A 1284 ALA ASN ALA ARG GLY ALA ALA TYR GLU VAL PHE LYS ILE SEQRES 29 A 1284 ILE ASP ASN LYS PRO SER ILE ASP SER PHE SER LYS SER SEQRES 30 A 1284 GLY HIS LYS PRO ASP ASN ILE GLN GLY ASN LEU GLU PHE SEQRES 31 A 1284 LYS ASN ILE HIS PHE SER TYR PRO SER ARG LYS GLU VAL SEQRES 32 A 1284 GLN ILE LEU LYS GLY LEU ASN LEU LYS VAL LYS SER GLY SEQRES 33 A 1284 GLN THR VAL ALA LEU VAL GLY ASN SER GLY CYS GLY LYS SEQRES 34 A 1284 SER THR THR VAL GLN LEU MET GLN ARG LEU TYR ASP PRO SEQRES 35 A 1284 LEU ASP GLY MET VAL SER ILE ASP GLY GLN ASP ILE ARG SEQRES 36 A 1284 THR ILE ASN VAL ARG TYR LEU ARG GLU ILE ILE GLY VAL SEQRES 37 A 1284 VAL SER GLN GLU PRO VAL LEU PHE ALA THR THR ILE ALA SEQRES 38 A 1284 GLU ASN ILE ARG TYR GLY ARG GLU ASP VAL THR MET ASP SEQRES 39 A 1284 GLU ILE GLU LYS ALA VAL LYS GLU ALA ASN ALA TYR ASP SEQRES 40 A 1284 PHE ILE MET LYS LEU PRO HIS GLN PHE ASP THR LEU VAL SEQRES 41 A 1284 GLY GLU ARG GLY ALA GLN LEU SER GLY GLY GLN LYS GLN SEQRES 42 A 1284 ARG ILE ALA ILE ALA ARG ALA LEU VAL ARG ASN PRO LYS SEQRES 43 A 1284 ILE LEU LEU LEU ASP GLU ALA THR SER ALA LEU ASP THR SEQRES 44 A 1284 GLU SER GLU ALA VAL VAL GLN ALA ALA LEU ASP LYS ALA SEQRES 45 A 1284 ARG GLU GLY ARG THR THR ILE VAL ILE ALA HIS ARG LEU SEQRES 46 A 1284 SER THR VAL ARG ASN ALA ASP VAL ILE ALA GLY PHE ASP SEQRES 47 A 1284 GLY GLY VAL ILE VAL GLU GLN GLY ASN HIS ASP GLU LEU SEQRES 48 A 1284 MET ARG GLU LYS GLY ILE TYR PHE LYS LEU VAL MET THR SEQRES 49 A 1284 GLN THR ALA GLY ASN GLU ILE GLU LEU GLY ASN GLU ALA SEQRES 50 A 1284 CYS LYS SER LYS ASP GLU ILE ASP ASN LEU ASP MET SER SEQRES 51 A 1284 SER LYS ASP SER GLY SER SER LEU ILE ARG ARG ARG SER SEQRES 52 A 1284 THR ARG LYS SER ILE CYS GLY PRO HIS ASP GLN ASP ARG SEQRES 53 A 1284 LYS LEU SER THR LYS GLU ALA LEU ASP GLU ASP VAL PRO SEQRES 54 A 1284 PRO ALA SER PHE TRP ARG ILE LEU LYS LEU ASN SER THR SEQRES 55 A 1284 GLU TRP PRO TYR PHE VAL VAL GLY ILE PHE CYS ALA ILE SEQRES 56 A 1284 ILE ASN GLY GLY LEU GLN PRO ALA PHE SER VAL ILE PHE SEQRES 57 A 1284 SER LYS VAL VAL GLY VAL PHE THR ASN GLY GLY PRO PRO SEQRES 58 A 1284 GLU THR GLN ARG GLN ASN SER ASN LEU PHE SER LEU LEU SEQRES 59 A 1284 PHE LEU ILE LEU GLY ILE ILE SER PHE ILE THR PHE PHE SEQRES 60 A 1284 LEU GLN GLY PHE THR PHE GLY LYS ALA GLY GLU ILE LEU SEQRES 61 A 1284 THR LYS ARG LEU ARG TYR MET VAL PHE LYS SER MET LEU SEQRES 62 A 1284 ARG GLN ASP VAL SER TRP PHE ASP ASP PRO LYS ASN THR SEQRES 63 A 1284 THR GLY ALA LEU THR THR ARG LEU ALA ASN ASP ALA ALA SEQRES 64 A 1284 GLN VAL LYS GLY ALA THR GLY SER ARG LEU ALA VAL ILE SEQRES 65 A 1284 PHE GLN ASN ILE ALA ASN LEU GLY THR GLY ILE ILE ILE SEQRES 66 A 1284 SER LEU ILE TYR GLY TRP GLN LEU THR LEU LEU LEU LEU SEQRES 67 A 1284 ALA ILE VAL PRO ILE ILE ALA ILE ALA GLY VAL VAL GLU SEQRES 68 A 1284 MET LYS MET LEU SER GLY GLN ALA LEU LYS ASP LYS LYS SEQRES 69 A 1284 GLU LEU GLU GLY SER GLY LYS ILE ALA THR GLU ALA ILE SEQRES 70 A 1284 GLU ASN PHE ARG THR VAL VAL SER LEU THR ARG GLU GLN SEQRES 71 A 1284 LYS PHE GLU THR MET TYR ALA GLN SER LEU GLN ILE PRO SEQRES 72 A 1284 TYR ARG ASN ALA MET LYS LYS ALA HIS VAL PHE GLY ILE SEQRES 73 A 1284 THR PHE SER PHE THR GLN ALA MET MET TYR PHE SER TYR SEQRES 74 A 1284 ALA ALA CYS PHE ARG PHE GLY ALA TYR LEU VAL THR GLN SEQRES 75 A 1284 GLN LEU MET THR PHE GLU ASN VAL LEU LEU VAL PHE SER SEQRES 76 A 1284 ALA ILE VAL PHE GLY ALA MET ALA VAL GLY GLN VAL SER SEQRES 77 A 1284 SER PHE ALA PRO ASP TYR ALA LYS ALA THR VAL SER ALA SEQRES 78 A 1284 SER HIS ILE ILE ARG ILE ILE GLU LYS THR PRO GLU ILE SEQRES 79 A 1284 ASP SER TYR SER THR GLN GLY LEU LYS PRO ASN MET LEU SEQRES 80 A 1284 GLU GLY ASN VAL GLN PHE SER GLY VAL VAL PHE ASN TYR SEQRES 81 A 1284 PRO THR ARG PRO SER ILE PRO VAL LEU GLN GLY LEU SER SEQRES 82 A 1284 LEU GLU VAL LYS LYS GLY GLN THR LEU ALA LEU VAL GLY SEQRES 83 A 1284 SER SER GLY CYS GLY LYS SER THR VAL VAL GLN LEU LEU SEQRES 84 A 1284 GLU ARG PHE TYR ASP PRO MET ALA GLY SER VAL PHE LEU SEQRES 85 A 1284 ASP GLY LYS GLU ILE LYS GLN LEU ASN VAL GLN TRP LEU SEQRES 86 A 1284 ARG ALA GLN LEU GLY ILE VAL SER GLN GLU PRO ILE LEU SEQRES 87 A 1284 PHE ASP CYS SER ILE ALA GLU ASN ILE ALA TYR GLY ASP SEQRES 88 A 1284 ASN SER ARG VAL VAL SER TYR GLU GLU ILE VAL ARG ALA SEQRES 89 A 1284 ALA LYS GLU ALA ASN ILE HIS GLN PHE ILE ASP SER LEU SEQRES 90 A 1284 PRO ASP LYS TYR ASN THR ARG VAL GLY ASP LYS GLY THR SEQRES 91 A 1284 GLN LEU SER GLY GLY GLN LYS GLN ARG ILE ALA ILE ALA SEQRES 92 A 1284 ARG ALA LEU VAL ARG GLN PRO HIS ILE LEU LEU LEU ASP SEQRES 93 A 1284 GLU ALA THR SER ALA LEU ASP THR GLU SER GLU LYS VAL SEQRES 94 A 1284 VAL GLN GLU ALA LEU ASP LYS ALA ARG GLU GLY ARG THR SEQRES 95 A 1284 CYS ILE VAL ILE ALA HIS ARG LEU SER THR ILE GLN ASN SEQRES 96 A 1284 ALA ASP LEU ILE VAL VAL ILE GLN ASN GLY LYS VAL LYS SEQRES 97 A 1284 GLU HIS GLY THR HIS GLN GLN LEU LEU ALA GLN LYS GLY SEQRES 98 A 1284 ILE TYR PHE SER MET VAL SER VAL GLN ALA GLY ALA LYS SEQRES 99 A 1284 ARG SER LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 THR A 37 TYR A 41 5 5 HELIX 2 AA2 GLY A 43 THR A 89 1 47 HELIX 3 AA3 ARG A 97 CYS A 133 1 37 HELIX 4 AA4 CYS A 133 GLN A 154 1 22 HELIX 5 AA5 ILE A 156 VAL A 161 1 6 HELIX 6 AA6 GLU A 166 ILE A 182 1 17 HELIX 7 AA7 ASP A 184 GLY A 207 1 24 HELIX 8 AA8 TRP A 208 ALA A 256 1 49 HELIX 9 AA9 ALA A 256 GLY A 264 1 9 HELIX 10 AB1 GLY A 265 SER A 319 1 55 HELIX 11 AB2 GLY A 325 ASP A 366 1 42 HELIX 12 AB3 GLY A 428 GLN A 437 1 10 HELIX 13 AB4 ASN A 458 ILE A 465 1 8 HELIX 14 AB5 THR A 479 TYR A 486 1 8 HELIX 15 AB6 THR A 492 ALA A 503 1 12 HELIX 16 AB7 ASP A 507 LEU A 512 1 6 HELIX 17 AB8 HIS A 514 THR A 518 5 5 HELIX 18 AB9 SER A 528 ASN A 544 1 17 HELIX 19 AC1 ASP A 558 ARG A 573 1 16 HELIX 20 AC2 ASN A 607 LYS A 615 1 9 HELIX 21 AC3 GLY A 616 GLN A 625 1 10 HELIX 22 AC4 TRP A 694 GLU A 703 1 10 HELIX 23 AC5 VAL A 708 GLY A 719 1 12 HELIX 24 AC6 GLY A 719 ASN A 737 1 19 HELIX 25 AC7 GLU A 742 ILE A 757 1 16 HELIX 26 AC8 LEU A 758 ARG A 794 1 37 HELIX 27 AC9 THR A 806 ILE A 848 1 43 HELIX 28 AD1 TRP A 851 ALA A 859 1 9 HELIX 29 AD2 ILE A 860 ASN A 899 1 40 HELIX 30 AD3 ARG A 901 LEU A 906 1 6 HELIX 31 AD4 THR A 907 ALA A 957 1 51 HELIX 32 AD5 TYR A 958 GLN A 963 1 6 HELIX 33 AD6 ASN A 969 GLU A 1009 1 41 HELIX 34 AD7 CYS A 1070 ARG A 1081 1 12 HELIX 35 AD8 GLU A 1096 LEU A 1100 5 5 HELIX 36 AD9 ASN A 1101 ARG A 1106 1 6 HELIX 37 AE1 SER A 1122 ALA A 1128 1 7 HELIX 38 AE2 SER A 1137 ALA A 1148 1 12 HELIX 39 AE3 ILE A 1150 LEU A 1157 1 8 HELIX 40 AE4 ASP A 1159 THR A 1163 5 5 HELIX 41 AE5 SER A 1173 LEU A 1186 1 14 HELIX 42 AE6 ASP A 1203 ARG A 1218 1 16 HELIX 43 AE7 THR A 1252 GLN A 1259 1 8 HELIX 44 AE8 GLY A 1261 ALA A 1271 1 11 SHEET 1 AA1 3 ASN A 410 VAL A 413 0 SHEET 2 AA1 3 LEU A 388 HIS A 394 -1 N PHE A 390 O LEU A 411 SHEET 3 AA1 3 ASP A 444 ILE A 449 -1 O SER A 448 N GLU A 389 SHEET 1 AA2 6 ILE A 466 VAL A 469 0 SHEET 2 AA2 6 ILE A 547 ASP A 551 1 O ASP A 551 N VAL A 469 SHEET 3 AA2 6 THR A 577 ILE A 581 1 O ILE A 581 N LEU A 550 SHEET 4 AA2 6 THR A 418 LEU A 421 1 N LEU A 421 O VAL A 580 SHEET 5 AA2 6 VAL A 593 PHE A 597 1 O VAL A 593 N ALA A 420 SHEET 6 AA2 6 ILE A 602 GLY A 606 -1 O GLY A 606 N ILE A 594 SHEET 1 AA3 3 LEU A1049 VAL A1056 0 SHEET 2 AA3 3 VAL A1031 PHE A1038 -1 N VAL A1036 O LEU A1052 SHEET 3 AA3 3 SER A1089 PHE A1091 -1 O PHE A1091 N GLN A1032 SHEET 1 AA4 6 GLY A1110 VAL A1112 0 SHEET 2 AA4 6 ILE A1192 ASP A1196 1 O ASP A1196 N VAL A1112 SHEET 3 AA4 6 THR A1222 ILE A1226 1 O ILE A1224 N LEU A1195 SHEET 4 AA4 6 THR A1061 VAL A1065 1 N LEU A1062 O CYS A1223 SHEET 5 AA4 6 LEU A1238 GLN A1243 1 O LEU A1238 N ALA A1063 SHEET 6 AA4 6 LYS A1246 GLY A1251 -1 O LYS A1246 N GLN A1243 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000