HEADER SUGAR BINDING PROTEIN 21-MAY-18 6GKQ TITLE X-RAY STRUCTURE DETERMINED FROM EX VIVO CHARCOT-LEYDEN CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALECTIN-10; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GAL-10,CHARCOT-LEYDEN CRYSTAL PROTEIN,CLC,EOSINOPHIL COMPND 5 LYSOPHOSPHOLIPASE,LYSOLECITHIN ACYLHYDROLASE; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: THIS X-RAY DATA WAS COLLECTED FROM AN EX VIVO CHARCOT- COMPND 8 LEYDEN CRYSTAL. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS GALECTIN-10, EX VIVO CRYSTAL, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.VERSTRAETE,K.VERSCHUEREN,S.N.SAVVIDES REVDAT 2 17-JAN-24 6GKQ 1 REMARK REVDAT 1 05-JUN-19 6GKQ 0 JRNL AUTH E.K.PERSSON,K.VERSTRAETE,I.HEYNDRICKX,E.GEVAERT,H.AEGERTER, JRNL AUTH 2 J.M.PERCIER,K.DESWARTE,K.H.G.VERSCHUEREN,A.DANSERCOER, JRNL AUTH 3 D.GRAS,P.CHANEZ,C.BACHERT,A.GONCALVES,H.VAN GORP,H.DE HAARD, JRNL AUTH 4 C.BLANCHETOT,M.SAUNDERS,H.HAMMAD,S.N.SAVVIDES,B.N.LAMBRECHT JRNL TITL PROTEIN CRYSTALLIZATION PROMOTES TYPE 2 IMMUNITY AND IS JRNL TITL 2 REVERSIBLE BY ANTIBODY TREATMENT. JRNL REF SCIENCE V. 364 2019 JRNL REFN ESSN 1095-9203 JRNL PMID 31123109 JRNL DOI 10.1126/SCIENCE.AAW4295 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 8984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 896 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.57 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2460 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2080 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2203 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE : 0.2370 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.45 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 257 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1110 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.73700 REMARK 3 B22 (A**2) : -5.73700 REMARK 3 B33 (A**2) : 11.47410 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.280 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.304 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.215 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.237 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.197 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.878 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1151 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1558 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 402 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 31 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 163 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1151 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 143 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1302 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.27 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.52 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|2 - A|11 } REMARK 3 ORIGIN FOR THE GROUP (A): -35.7066 21.4431 11.3530 REMARK 3 T TENSOR REMARK 3 T11: 0.0056 T22: 0.0176 REMARK 3 T33: -0.0175 T12: 0.0361 REMARK 3 T13: -0.0256 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.8822 L22: -0.4808 REMARK 3 L33: 1.4022 L12: -1.4912 REMARK 3 L13: 0.3019 L23: 0.8752 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.0514 S13: 0.0800 REMARK 3 S21: 0.0027 S22: -0.0333 S23: 0.0251 REMARK 3 S31: -0.0148 S32: 0.0034 S33: -0.0095 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|12 - A|34 } REMARK 3 ORIGIN FOR THE GROUP (A): -24.2942 22.9613 11.9216 REMARK 3 T TENSOR REMARK 3 T11: 0.0170 T22: -0.0626 REMARK 3 T33: 0.0121 T12: 0.0215 REMARK 3 T13: 0.0067 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 1.7622 L22: 0.6914 REMARK 3 L33: 0.0398 L12: 0.1909 REMARK 3 L13: -0.5809 L23: 0.9318 REMARK 3 S TENSOR REMARK 3 S11: 0.0941 S12: -0.1105 S13: 0.1030 REMARK 3 S21: -0.0661 S22: 0.0000 S23: -0.0359 REMARK 3 S31: -0.0728 S32: -0.0070 S33: -0.0941 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|35 - A|57 } REMARK 3 ORIGIN FOR THE GROUP (A): -26.4431 11.3569 8.9139 REMARK 3 T TENSOR REMARK 3 T11: -0.0123 T22: -0.0114 REMARK 3 T33: 0.0103 T12: -0.0141 REMARK 3 T13: -0.0079 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.6612 L22: 3.2143 REMARK 3 L33: 1.1009 L12: 0.6027 REMARK 3 L13: 0.4746 L23: 0.2015 REMARK 3 S TENSOR REMARK 3 S11: -0.0513 S12: -0.0533 S13: -0.0665 REMARK 3 S21: 0.0766 S22: 0.0614 S23: 0.0751 REMARK 3 S31: 0.0244 S32: -0.0997 S33: -0.0101 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|58 - A|87 } REMARK 3 ORIGIN FOR THE GROUP (A): -16.6185 14.0795 12.5139 REMARK 3 T TENSOR REMARK 3 T11: -0.0233 T22: -0.0269 REMARK 3 T33: 0.0109 T12: -0.0096 REMARK 3 T13: -0.0099 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.3574 L22: 1.3165 REMARK 3 L33: 2.5819 L12: -0.1056 REMARK 3 L13: -0.3420 L23: 1.1331 REMARK 3 S TENSOR REMARK 3 S11: 0.1069 S12: -0.0482 S13: -0.0578 REMARK 3 S21: -0.0586 S22: 0.0557 S23: -0.1675 REMARK 3 S31: 0.1266 S32: 0.2108 S33: -0.1625 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|88 - A|95 } REMARK 3 ORIGIN FOR THE GROUP (A): -22.6660 25.6363 6.4543 REMARK 3 T TENSOR REMARK 3 T11: 0.0195 T22: -0.0212 REMARK 3 T33: 0.0024 T12: 0.0102 REMARK 3 T13: 0.0179 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: -0.8712 L22: 2.1657 REMARK 3 L33: 0.1247 L12: 0.4811 REMARK 3 L13: 0.5981 L23: -0.5989 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: 0.0486 S13: 0.0917 REMARK 3 S21: 0.0109 S22: 0.0501 S23: -0.0409 REMARK 3 S31: -0.0911 S32: 0.0146 S33: 0.0229 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|96 - A|129 } REMARK 3 ORIGIN FOR THE GROUP (A): -21.0927 16.5326 3.1200 REMARK 3 T TENSOR REMARK 3 T11: -0.0131 T22: -0.0521 REMARK 3 T33: -0.0081 T12: -0.0048 REMARK 3 T13: 0.0027 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 1.4605 L22: 1.7729 REMARK 3 L33: 1.6354 L12: 0.5105 REMARK 3 L13: 0.6080 L23: 0.2394 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.1737 S13: 0.0262 REMARK 3 S21: -0.1661 S22: 0.0473 S23: -0.1289 REMARK 3 S31: -0.1262 S32: 0.0197 S33: -0.0811 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { A|130 - A|138 } REMARK 3 ORIGIN FOR THE GROUP (A): -30.9837 25.4311 7.3967 REMARK 3 T TENSOR REMARK 3 T11: 0.0861 T22: -0.0412 REMARK 3 T33: -0.0137 T12: 0.0086 REMARK 3 T13: 0.0112 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 2.4281 L22: -0.3197 REMARK 3 L33: 0.0775 L12: 0.4240 REMARK 3 L13: -1.7449 L23: -0.3947 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: 0.0177 S13: 0.1320 REMARK 3 S21: 0.0218 S22: 0.0227 S23: 0.0379 REMARK 3 S31: -0.0560 S32: 0.0235 S33: -0.0064 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1200010135. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9972 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.86 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LCL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DATA WAS COLLECTED FROM EX VIVO REMARK 280 CHARCOT-LEYDEN CRYSTALS. STICKY ALLERGIC MUCIN TYPE MUCUS WAS REMARK 280 OBTAINED FROM CRSWNP PATIENTS UNDERGOING ENDOSCOPIC SINUS REMARK 280 SURGERY. ONE G OF THE ALLERGIC MUCIN WAS CUT THOROUGHLY IN 10 ML REMARK 280 RPMI-1640 (SIGMA-ALDRICH) CONTAINING ANTIBIOTICS (50 IU/ML REMARK 280 PENICILLIN AND 50 MG/ML STREPTOMYCIN; ONE G OF THE ALLERGIC REMARK 280 MUCIN WAS CUT THOROUGHLY IN 10 ML RPMI-1640 (SIGMA-ALDRICH) REMARK 280 CONTAINING ANTIBIOTICS (50 IU/ML PENICILLIN AND 50 MG/ML REMARK 280 STREPTOMYCIN; THERMO FISHER SCIENTIFIC), 0.1 PERCENT BSA (SIGMA- REMARK 280 ALDRICH) AND 1 MG/ML COLLAGEN TYPE 2 (WORTHINGTON), AND FURTHER REMARK 280 HOMOGENIZED USING A GENTLEMACS DISSOCIATOR (MYLTENYI BIOTEC) AND REMARK 280 SUBSEQUENTLY INCUBED AT 37 DEGREES FOR 45 MINUTES UNDER REMARK 280 CONTINUOUS ROTATION. AFTER CENTRIFUGATION THE PELLET WAS REMARK 280 DISSOLVED IN 3 ML PBS CONTAINING ANTIBIOTICS, TO WHICH 6 ML REMARK 280 FICOLL-PAQUE (GE HEALTHCARE) WAS ADDED. AFTER CENTRIFUGATION AT REMARK 280 250G AND REMOVAL OF THE SUPERNATANT AND MOST OF THE FICOLL LAYER, REMARK 280 THE PELLET WAS DISSOLVED 1:10 IN PBS WITH ANTIBIOTICS. THIS REMARK 280 PRECIPITATION PROCESS WAS REPEATED 5 MORE TIMES. THE FINAL REMARK 280 PELLET CONTAINING THE CRYSTALS WAS RESUSPENDED IN PBS WITH REMARK 280 ANTIBIOTICS., IN CELL, TEMPERATURE 310K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 172.22467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.11233 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 129.16850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.05617 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 215.28083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 172.22467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 86.11233 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 43.05617 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 129.16850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 215.28083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 43.05617 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 314 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 342 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 139 REMARK 465 LEU A 140 REMARK 465 LYS A 141 REMARK 465 ARG A 142 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 60 -70.52 -117.86 REMARK 500 LYS A 73 -146.64 -96.39 REMARK 500 ARG A 128 -149.84 87.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 DBREF 6GKQ A 1 142 UNP Q05315 LEG10_HUMAN 1 142 SEQADV 6GKQ VAL A 28 UNP Q05315 ALA 28 VARIANT SEQRES 1 A 142 MET SER LEU LEU PRO VAL PRO TYR THR GLU ALA ALA SER SEQRES 2 A 142 LEU SER THR GLY SER THR VAL THR ILE LYS GLY ARG PRO SEQRES 3 A 142 LEU VAL CYS PHE LEU ASN GLU PRO TYR LEU GLN VAL ASP SEQRES 4 A 142 PHE HIS THR GLU MET LYS GLU GLU SER ASP ILE VAL PHE SEQRES 5 A 142 HIS PHE GLN VAL CYS PHE GLY ARG ARG VAL VAL MET ASN SEQRES 6 A 142 SER ARG GLU TYR GLY ALA TRP LYS GLN GLN VAL GLU SER SEQRES 7 A 142 LYS ASN MET PRO PHE GLN ASP GLY GLN GLU PHE GLU LEU SEQRES 8 A 142 SER ILE SER VAL LEU PRO ASP LYS TYR GLN VAL MET VAL SEQRES 9 A 142 ASN GLY GLN SER SER TYR THR PHE ASP HIS ARG ILE LYS SEQRES 10 A 142 PRO GLU ALA VAL LYS MET VAL GLN VAL TRP ARG ASP ILE SEQRES 11 A 142 SER LEU THR LYS PHE ASN VAL SER TYR LEU LYS ARG HET GOL A 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *112(H2 O) HELIX 1 AA1 CYS A 29 GLU A 33 5 5 HELIX 2 AA2 LYS A 117 VAL A 121 5 5 SHEET 1 AA1 6 TYR A 8 ALA A 11 0 SHEET 2 AA1 6 MET A 123 ARG A 128 -1 O VAL A 126 N TYR A 8 SHEET 3 AA1 6 TYR A 35 HIS A 41 -1 N ASP A 39 O GLN A 125 SHEET 4 AA1 6 ILE A 50 CYS A 57 -1 O VAL A 56 N LEU A 36 SHEET 5 AA1 6 ARG A 61 GLU A 68 -1 O ARG A 61 N CYS A 57 SHEET 6 AA1 6 ALA A 71 TRP A 72 -1 O ALA A 71 N GLU A 68 SHEET 1 AA2 6 TYR A 8 ALA A 11 0 SHEET 2 AA2 6 MET A 123 ARG A 128 -1 O VAL A 126 N TYR A 8 SHEET 3 AA2 6 TYR A 35 HIS A 41 -1 N ASP A 39 O GLN A 125 SHEET 4 AA2 6 ILE A 50 CYS A 57 -1 O VAL A 56 N LEU A 36 SHEET 5 AA2 6 ARG A 61 GLU A 68 -1 O ARG A 61 N CYS A 57 SHEET 6 AA2 6 VAL A 76 SER A 78 -1 O SER A 78 N VAL A 62 SHEET 1 AA3 5 GLN A 107 ASP A 113 0 SHEET 2 AA3 5 LYS A 99 VAL A 104 -1 N VAL A 102 O TYR A 110 SHEET 3 AA3 5 PHE A 89 VAL A 95 -1 N SER A 94 O GLN A 101 SHEET 4 AA3 5 THR A 19 PRO A 26 -1 N GLY A 24 O PHE A 89 SHEET 5 AA3 5 ILE A 130 VAL A 137 -1 O ASN A 136 N THR A 21 CISPEP 1 VAL A 6 PRO A 7 0 0.48 SITE 1 AC1 5 HIS A 53 ASN A 65 GLN A 75 HOH A 331 SITE 2 AC1 5 HOH A 337 CRYST1 48.941 48.941 258.337 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020433 0.011797 0.000000 0.00000 SCALE2 0.000000 0.023594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003871 0.00000