HEADER SIGNALING PROTEIN 07-JUN-18 6GPS TITLE CRYSTAL STRUCTURE OF CCR2A IN COMPLEX WITH MK-0812 COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-C CHEMOKINE RECEPTOR TYPE 2,RUBREDOXIN,C-C CHEMOKINE COMPND 3 RECEPTOR TYPE 2; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RUBREDOXIN INSERTED INTO CCR2A BETWEEN RESIDUE 231 AND 235, COMPND 6 RUBREDOXIN INSERTED INTO CCR2A BETWEEN RESIDUE 231 AND 235,RUBREDOXIN COMPND 7 INSERTED INTO CCR2A BETWEEN RESIDUE 231 AND 235,RUBREDOXIN INSERTED COMPND 8 INTO CCR2A BETWEEN RESIDUE 231 AND 235,RUBREDOXIN INSERTED INTO CCR2A COMPND 9 BETWEEN RESIDUE 231 AND 235,RUBREDOXIN INSERTED INTO CCR2A BETWEEN COMPND 10 RESIDUE 231 AND 235,RUBREDOXIN INSERTED INTO CCR2A BETWEEN RESIDUE COMPND 11 231 AND 235,RUBREDOXIN INSERTED INTO CCR2A BETWEEN RESIDUE 231 AND COMPND 12 235,RUBREDOXIN INSERTED INTO CCR2A BETWEEN RESIDUE 231 AND 235; COMPND 13 SYNONYM: CCR2,MONOCYTE CHEMOATTRACTANT PROTEIN 1 RECEPTOR,MCP-1-R,RD, COMPND 14 CCR2,MONOCYTE CHEMOATTRACTANT PROTEIN 1 RECEPTOR,MCP-1-R; COMPND 15 ENGINEERED: YES; COMPND 16 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, CLOSTRIDIUM PASTEURIANUM; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 1501; SOURCE 5 GENE: CCR2, CMKBR2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GPCR, SIGNALLING, DRUG-DESIGN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.PAUTSCH,G.SCHNAPP REVDAT 2 13-MAR-19 6GPS 1 JRNL REVDAT 1 02-JAN-19 6GPS 0 JRNL AUTH A.K.APEL,R.K.Y.CHENG,C.S.TAUTERMANN,M.BRAUCHLE,C.Y.HUANG, JRNL AUTH 2 A.PAUTSCH,M.HENNIG,H.NAR,G.SCHNAPP JRNL TITL CRYSTAL STRUCTURE OF CC CHEMOKINE RECEPTOR 2A IN COMPLEX JRNL TITL 2 WITH AN ORTHOSTERIC ANTAGONIST PROVIDES INSIGHTS FOR THE JRNL TITL 3 DESIGN OF SELECTIVE ANTAGONISTS. JRNL REF STRUCTURE V. 27 427 2019 JRNL REFN ISSN 1878-4186 JRNL PMID 30581043 JRNL DOI 10.1016/J.STR.2018.10.027 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 8261 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 372 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 18 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.09 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 459 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2365 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 439 REMARK 3 BIN R VALUE (WORKING SET) : 0.2355 REMARK 3 BIN FREE R VALUE : 0.2583 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.36 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2649 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 99.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 111.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 24.16420 REMARK 3 B22 (A**2) : -34.11460 REMARK 3 B33 (A**2) : 9.95040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.67710 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.570 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.545 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.897 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.783 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5481 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9941 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1194 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 810 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5481 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 366 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5440 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.77 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.99 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.35 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 11.0290 -6.9402 -32.6241 REMARK 3 T TENSOR REMARK 3 T11: -0.0155 T22: 0.0599 REMARK 3 T33: -0.1055 T12: -0.0086 REMARK 3 T13: -0.0828 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 1.1124 L22: 0.0000 REMARK 3 L33: 0.5932 L12: -0.2819 REMARK 3 L13: 0.3518 L23: -0.7546 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: -0.0257 S13: -0.0057 REMARK 3 S21: -0.0182 S22: -0.0316 S23: -0.0184 REMARK 3 S31: 0.0245 S32: -0.0244 S33: 0.0207 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8271 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 43.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RECONSTITUTED INTO LIPIDIC CUBIC PHASE REMARK 280 (LCP) BY MIXING WITH 9.9 MAG (MONOOLEIN, SIGMA) USING A SYRINGE REMARK 280 MIXER AS DESCRIBED PREVIOUSLY (CAFFREY AND CHEREZOV, 2009). 35 % REMARK 280 (W/W) OF THE RECEPTOR SOLUTION WAS MIXED WITH 61.5 % MONOOLEIN REMARK 280 (W/W), ADDITIONALLY SUPPLEMENTED WITH 3.5 % CHOLESTEROL (W/W). REMARK 280 CRYSTALLIZATION TRIALS WERE PERFORMED IN 96-WELL GLASS SANDWICH REMARK 280 PLATES (MOLECULAR DIMENSIONS). THE LCP DROPS WERE PIPETTED IN A REMARK 280 BOLUS VOLUME OF 50 NL USING A GRYPHON ROBOT AND OVERLAID WITH REMARK 280 800 NL OF PRECIPITANT SOLUTION PER WELL. DIFFRACTING QUALITY REMARK 280 CRYSTALS WERE OBTAINED WITH 0.1 M MES PH 6.0, 0.2 M AMMONIUM REMARK 280 ACETATE AND 40 % PEG400, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.60000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 SER A 5 REMARK 465 ARG A 6 REMARK 465 SER A 7 REMARK 465 ARG A 8 REMARK 465 PHE A 9 REMARK 465 ILE A 10 REMARK 465 ARG A 11 REMARK 465 ASN A 12 REMARK 465 THR A 13 REMARK 465 GLN A 14 REMARK 465 GLU A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 GLU A 19 REMARK 465 VAL A 20 REMARK 465 THR A 21 REMARK 465 THR A 22 REMARK 465 PHE A 23 REMARK 465 PHE A 24 REMARK 465 ASP A 25 REMARK 465 TYR A 26 REMARK 465 ASP A 27 REMARK 465 TYR A 28 REMARK 465 GLY A 29 REMARK 465 ALA A 30 REMARK 465 PRO A 31 REMARK 465 CYS A 32 REMARK 465 HIS A 33 REMARK 465 LYS A 34 REMARK 465 PHE A 35 REMARK 465 ASP A 36 REMARK 465 GLY A 273 REMARK 465 LEU A 274 REMARK 465 SER A 275 REMARK 465 ASN A 276 REMARK 465 CYS A 277 REMARK 465 GLU A 278 REMARK 465 CYS A 322 REMARK 465 ARG A 323 REMARK 465 ILE A 324 REMARK 465 ALA A 325 REMARK 465 PRO A 326 REMARK 465 LEU A 327 REMARK 465 GLN A 328 REMARK 465 LYS A 329 REMARK 465 PRO A 330 REMARK 465 VAL A 331 REMARK 465 CYS A 332 REMARK 465 GLY A 333 REMARK 465 GLY A 334 REMARK 465 PRO A 335 REMARK 465 GLY A 336 REMARK 465 VAL A 337 REMARK 465 ARG A 338 REMARK 465 PRO A 339 REMARK 465 GLY A 340 REMARK 465 LYS A 341 REMARK 465 ASN A 342 REMARK 465 VAL A 343 REMARK 465 LYS A 344 REMARK 465 VAL A 345 REMARK 465 THR A 346 REMARK 465 THR A 347 REMARK 465 GLN A 348 REMARK 465 GLY A 349 REMARK 465 LEU A 350 REMARK 465 LEU A 351 REMARK 465 ASP A 352 REMARK 465 GLY A 353 REMARK 465 ARG A 354 REMARK 465 GLY A 355 REMARK 465 LYS A 356 REMARK 465 GLY A 357 REMARK 465 LYS A 358 REMARK 465 SER A 359 REMARK 465 ILE A 360 REMARK 465 GLY A 361 REMARK 465 ARG A 362 REMARK 465 ALA A 363 REMARK 465 PRO A 364 REMARK 465 GLU A 365 REMARK 465 ALA A 366 REMARK 465 SER A 367 REMARK 465 LEU A 368 REMARK 465 GLN A 369 REMARK 465 ASP A 370 REMARK 465 LYS A 371 REMARK 465 GLU A 372 REMARK 465 GLY A 373 REMARK 465 ALA A 374 REMARK 465 GLU A 375 REMARK 465 VAL A 376 REMARK 465 LEU A 377 REMARK 465 PHE A 378 REMARK 465 GLN A 379 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 211 -43.33 -136.73 REMARK 500 LEU A 320 -66.98 -108.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1006 SG REMARK 620 2 CYS A1009 SG 96.1 REMARK 620 3 CYS A1039 SG 112.6 95.9 REMARK 620 4 CYS A1042 SG 118.6 103.7 122.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F7N A 1102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5T1A RELATED DB: PDB REMARK 900 5T1A CONTAINS STRUCTURE OF CCR2B DBREF 6GPS A 2 231 UNP P41597 CCR2_HUMAN 2 231 DBREF 6GPS A 1001 1054 UNP P00268 RUBR_CLOPA 1 54 DBREF 6GPS A 235 374 UNP P41597 CCR2_HUMAN 235 374 SEQADV 6GPS GLN A 14 UNP P41597 ASN 14 ENGINEERED MUTATION SEQADV 6GPS TYR A 70 UNP P41597 CYS 70 ENGINEERED MUTATION SEQADV 6GPS ASN A 175 UNP P41597 GLY 175 ENGINEERED MUTATION SEQADV 6GPS ASP A 241 UNP P41597 ALA 241 ENGINEERED MUTATION SEQADV 6GPS GLU A 311 UNP P41597 LYS 311 ENGINEERED MUTATION SEQADV 6GPS GLU A 375 UNP P41597 EXPRESSION TAG SEQADV 6GPS VAL A 376 UNP P41597 EXPRESSION TAG SEQADV 6GPS LEU A 377 UNP P41597 EXPRESSION TAG SEQADV 6GPS PHE A 378 UNP P41597 EXPRESSION TAG SEQADV 6GPS GLN A 379 UNP P41597 EXPRESSION TAG SEQRES 1 A 429 LEU SER THR SER ARG SER ARG PHE ILE ARG ASN THR GLN SEQRES 2 A 429 GLU SER GLY GLU GLU VAL THR THR PHE PHE ASP TYR ASP SEQRES 3 A 429 TYR GLY ALA PRO CYS HIS LYS PHE ASP VAL LYS GLN ILE SEQRES 4 A 429 GLY ALA GLN LEU LEU PRO PRO LEU TYR SER LEU VAL PHE SEQRES 5 A 429 ILE PHE GLY PHE VAL GLY ASN MET LEU VAL VAL LEU ILE SEQRES 6 A 429 LEU ILE ASN TYR LYS LYS LEU LYS CYS LEU THR ASP ILE SEQRES 7 A 429 TYR LEU LEU ASN LEU ALA ILE SER ASP LEU LEU PHE LEU SEQRES 8 A 429 ILE THR LEU PRO LEU TRP ALA HIS SER ALA ALA ASN GLU SEQRES 9 A 429 TRP VAL PHE GLY ASN ALA MET CYS LYS LEU PHE THR GLY SEQRES 10 A 429 LEU TYR HIS ILE GLY TYR PHE GLY GLY ILE PHE PHE ILE SEQRES 11 A 429 ILE LEU LEU THR ILE ASP ARG TYR LEU ALA ILE VAL HIS SEQRES 12 A 429 ALA VAL PHE ALA LEU LYS ALA ARG THR VAL THR PHE GLY SEQRES 13 A 429 VAL VAL THR SER VAL ILE THR TRP LEU VAL ALA VAL PHE SEQRES 14 A 429 ALA SER VAL PRO ASN ILE ILE PHE THR LYS CYS GLN LYS SEQRES 15 A 429 GLU ASP SER VAL TYR VAL CYS GLY PRO TYR PHE PRO ARG SEQRES 16 A 429 GLY TRP ASN ASN PHE HIS THR ILE MET ARG ASN ILE LEU SEQRES 17 A 429 GLY LEU VAL LEU PRO LEU LEU ILE MET VAL ILE CYS TYR SEQRES 18 A 429 SER GLY ILE LEU LYS THR LEU LEU ARG MET LYS LYS TYR SEQRES 19 A 429 THR CYS THR VAL CYS GLY TYR ILE TYR ASN PRO GLU ASP SEQRES 20 A 429 GLY ASP PRO ASP ASN GLY VAL ASN PRO GLY THR ASP PHE SEQRES 21 A 429 LYS ASP ILE PRO ASP ASP TRP VAL CYS PRO LEU CYS GLY SEQRES 22 A 429 VAL GLY LYS ASP GLN PHE GLU GLU VAL GLU GLU GLU LYS SEQRES 23 A 429 LYS ARG HIS ARG ASP VAL ARG VAL ILE PHE THR ILE MET SEQRES 24 A 429 ILE VAL TYR PHE LEU PHE TRP THR PRO TYR ASN ILE VAL SEQRES 25 A 429 ILE LEU LEU ASN THR PHE GLN GLU PHE PHE GLY LEU SER SEQRES 26 A 429 ASN CYS GLU SER THR SER GLN LEU ASP GLN ALA THR GLN SEQRES 27 A 429 VAL THR GLU THR LEU GLY MET THR HIS CYS CYS ILE ASN SEQRES 28 A 429 PRO ILE ILE TYR ALA PHE VAL GLY GLU GLU PHE ARG SER SEQRES 29 A 429 LEU PHE HIS ILE ALA LEU GLY CYS ARG ILE ALA PRO LEU SEQRES 30 A 429 GLN LYS PRO VAL CYS GLY GLY PRO GLY VAL ARG PRO GLY SEQRES 31 A 429 LYS ASN VAL LYS VAL THR THR GLN GLY LEU LEU ASP GLY SEQRES 32 A 429 ARG GLY LYS GLY LYS SER ILE GLY ARG ALA PRO GLU ALA SEQRES 33 A 429 SER LEU GLN ASP LYS GLU GLY ALA GLU VAL LEU PHE GLN HET ZN A1101 1 HET F7N A1102 68 HETNAM ZN ZINC ION HETNAM F7N [(3~{S},4~{S})-3-METHOXYOXAN-4-YL]-[(1~{R},3~{S})-3- HETNAM 2 F7N PROPAN-2-YL-3-[[3-(TRIFLUOROMETHYL)-7,8-DIHYDRO-5~{H}- HETNAM 3 F7N 1,6-NAPHTHYRIDIN-6-YL]CARBONYL]CYCLOPENTYL]AZANIUM FORMUL 2 ZN ZN 2+ FORMUL 3 F7N C24 H35 F3 N3 O3 1+ HELIX 1 AA1 VAL A 37 TYR A 70 1 34 HELIX 2 AA2 CYS A 75 ILE A 93 1 19 HELIX 3 AA3 THR A 94 ALA A 102 1 9 HELIX 4 AA4 GLY A 109 VAL A 143 1 35 HELIX 5 AA5 ARG A 152 PHE A 178 1 27 HELIX 6 AA6 PRO A 195 LEU A 211 1 17 HELIX 7 AA7 LEU A 211 LYS A 1002 1 23 HELIX 8 AA8 ASP A 1019 GLY A 1023 5 5 HELIX 9 AA9 GLY A 1045 ASP A 1047 5 3 HELIX 10 AB1 LYS A 236 ASP A 241 1 6 HELIX 11 AB2 ASP A 241 PHE A 268 1 28 HELIX 12 AB3 THR A 280 HIS A 297 1 18 HELIX 13 AB4 ILE A 300 VAL A 308 1 9 HELIX 14 AB5 GLU A 310 ALA A 319 1 10 SHEET 1 AA1 2 THR A 179 GLU A 184 0 SHEET 2 AA1 2 VAL A 187 PRO A 192 -1 O VAL A 189 N GLN A 182 SHEET 1 AA2 3 ILE A1012 TYR A1013 0 SHEET 2 AA2 3 TYR A1004 CYS A1006 -1 N TYR A1004 O TYR A1013 SHEET 3 AA2 3 PHE A1049 GLU A1051 -1 O GLU A1050 N THR A1005 SSBOND 1 CYS A 113 CYS A 190 1555 1555 2.04 LINK SG CYS A1006 ZN ZN A1101 1555 1555 2.81 LINK SG CYS A1009 ZN ZN A1101 1555 1555 2.43 LINK SG CYS A1039 ZN ZN A1101 1555 1555 2.53 LINK SG CYS A1042 ZN ZN A1101 1555 1555 2.18 SITE 1 AC1 5 CYS A1006 CYS A1009 CYS A1039 CYS A1042 SITE 2 AC1 5 VAL A1044 SITE 1 AC2 15 VAL A 37 ILE A 40 GLY A 41 LEU A 44 SITE 2 AC2 15 LEU A 45 TYR A 49 TRP A 98 THR A 117 SITE 3 AC2 15 HIS A 121 CYS A 190 GLN A 288 VAL A 289 SITE 4 AC2 15 GLU A 291 THR A 292 MET A 295 CRYST1 38.500 61.200 123.570 90.00 97.66 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025974 0.000000 0.003493 0.00000 SCALE2 0.000000 0.016340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008165 0.00000