HEADER TRANSFERASE 02-JUL-18 6GYY TITLE CRYSTAL STRUCTURE OF DACA FROM STAPHYLOCOCCUS AUREUS, N166C/T172C TITLE 2 DOUBLE MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DAC,CYCLIC-DI-AMP SYNTHASE,C-DI-AMP SYNTHASE; COMPND 5 EC: 2.7.7.85; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: DACA, C7J94_12115; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS C-DI-AMP, DIADENYLATE CYCLASE, PROTEIN ENGINEERING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.TOSI,P.S.FREEMONT,A.GRUNDLING REVDAT 3 17-JAN-24 6GYY 1 REMARK REVDAT 2 30-JAN-19 6GYY 1 JRNL REVDAT 1 23-JAN-19 6GYY 0 JRNL AUTH T.TOSI,F.HOSHIGA,C.MILLERSHIP,R.SINGH,C.ELDRID,D.PATIN, JRNL AUTH 2 D.MENGIN-LECREULX,K.THALASSINOS,P.FREEMONT,A.GRUNDLING JRNL TITL INHIBITION OF THE STAPHYLOCOCCUS AUREUS C-DI-AMP CYCLASE JRNL TITL 2 DACA BY DIRECT INTERACTION WITH THE PHOSPHOGLUCOSAMINE JRNL TITL 3 MUTASE GLMM. JRNL REF PLOS PATHOG. V. 15 07537 2019 JRNL REFN ESSN 1553-7374 JRNL PMID 30668586 JRNL DOI 10.1371/JOURNAL.PPAT.1007537 REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 9471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0076 - 3.9945 1.00 3084 182 0.1858 0.2070 REMARK 3 2 3.9945 - 3.1709 1.00 2975 151 0.2497 0.2705 REMARK 3 3 3.1709 - 2.7702 1.00 2945 134 0.2786 0.3302 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2353 REMARK 3 ANGLE : 1.199 3177 REMARK 3 CHIRALITY : 0.081 371 REMARK 3 PLANARITY : 0.007 405 REMARK 3 DIHEDRAL : 8.510 1433 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6687 -3.2485 -0.4943 REMARK 3 T TENSOR REMARK 3 T11: 0.8756 T22: 0.9646 REMARK 3 T33: 0.9827 T12: -0.0072 REMARK 3 T13: 0.2138 T23: -0.1544 REMARK 3 L TENSOR REMARK 3 L11: 7.6064 L22: 3.0446 REMARK 3 L33: 1.3066 L12: 3.7771 REMARK 3 L13: -1.2531 L23: -0.5751 REMARK 3 S TENSOR REMARK 3 S11: -0.6039 S12: 0.2443 S13: 0.2389 REMARK 3 S21: -0.8867 S22: 0.1691 S23: -1.5545 REMARK 3 S31: 0.8912 S32: 0.7760 S33: 0.0277 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9802 1.7838 8.3467 REMARK 3 T TENSOR REMARK 3 T11: 0.5031 T22: 0.5723 REMARK 3 T33: 0.5205 T12: 0.0002 REMARK 3 T13: 0.0325 T23: -0.1110 REMARK 3 L TENSOR REMARK 3 L11: 3.8852 L22: 9.4618 REMARK 3 L33: 8.2157 L12: 2.2331 REMARK 3 L13: 0.4645 L23: 2.7835 REMARK 3 S TENSOR REMARK 3 S11: 0.1042 S12: -0.3153 S13: 0.1420 REMARK 3 S21: 0.2832 S22: 0.1376 S23: -0.0908 REMARK 3 S31: -0.2650 S32: 0.2543 S33: -0.1800 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4753 -10.4856 9.3775 REMARK 3 T TENSOR REMARK 3 T11: 0.9270 T22: 1.0540 REMARK 3 T33: 1.0416 T12: -0.2321 REMARK 3 T13: -0.0123 T23: -0.1177 REMARK 3 L TENSOR REMARK 3 L11: 0.0657 L22: 0.3816 REMARK 3 L33: 2.0154 L12: -0.0533 REMARK 3 L13: 0.1331 L23: 0.8293 REMARK 3 S TENSOR REMARK 3 S11: 1.0590 S12: 0.0547 S13: -0.2233 REMARK 3 S21: 3.2466 S22: -1.0673 S23: 1.0159 REMARK 3 S31: 1.4844 S32: -1.3168 S33: -0.0636 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9099 -9.4851 4.7265 REMARK 3 T TENSOR REMARK 3 T11: 0.7777 T22: 0.7224 REMARK 3 T33: 0.5778 T12: 0.0167 REMARK 3 T13: -0.1516 T23: -0.1423 REMARK 3 L TENSOR REMARK 3 L11: 6.6062 L22: 5.3326 REMARK 3 L33: 1.5821 L12: 1.3536 REMARK 3 L13: 0.5837 L23: 1.9898 REMARK 3 S TENSOR REMARK 3 S11: 0.3414 S12: -0.5007 S13: -0.4486 REMARK 3 S21: 0.2316 S22: -0.1704 S23: 0.5531 REMARK 3 S31: 0.5859 S32: -0.6111 S33: -0.3309 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 259 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4794 -9.6069 -4.4091 REMARK 3 T TENSOR REMARK 3 T11: 0.9971 T22: 0.8359 REMARK 3 T33: 0.8180 T12: 0.1089 REMARK 3 T13: -0.0042 T23: -0.1494 REMARK 3 L TENSOR REMARK 3 L11: 4.1258 L22: 6.6387 REMARK 3 L33: 5.2115 L12: 2.5364 REMARK 3 L13: 0.4826 L23: 2.8183 REMARK 3 S TENSOR REMARK 3 S11: 0.0760 S12: 0.4617 S13: -0.7691 REMARK 3 S21: -0.9086 S22: 0.2323 S23: -0.4292 REMARK 3 S31: 0.3418 S32: -0.0064 S33: -0.3990 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1351 16.4111 25.1437 REMARK 3 T TENSOR REMARK 3 T11: 0.6962 T22: 0.7874 REMARK 3 T33: 0.8859 T12: -0.0177 REMARK 3 T13: 0.0365 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 3.8620 L22: 1.5676 REMARK 3 L33: 1.4783 L12: 1.1715 REMARK 3 L13: 0.1880 L23: 0.5667 REMARK 3 S TENSOR REMARK 3 S11: 0.1801 S12: -0.1366 S13: -0.1718 REMARK 3 S21: 0.3082 S22: 0.1650 S23: 1.5929 REMARK 3 S31: -0.2540 S32: -0.9557 S33: -0.1727 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 131 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9184 13.2778 16.1072 REMARK 3 T TENSOR REMARK 3 T11: 0.6361 T22: 0.5764 REMARK 3 T33: 0.8055 T12: -0.0887 REMARK 3 T13: 0.1125 T23: -0.0554 REMARK 3 L TENSOR REMARK 3 L11: 4.0032 L22: 6.3715 REMARK 3 L33: 7.7027 L12: -0.8381 REMARK 3 L13: 1.7538 L23: 2.6294 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.5999 S13: 0.2728 REMARK 3 S21: -0.4420 S22: 0.1512 S23: -0.2238 REMARK 3 S31: -0.0901 S32: 0.3079 S33: -0.2009 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 168 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9919 2.5696 18.8838 REMARK 3 T TENSOR REMARK 3 T11: 0.9170 T22: 0.8505 REMARK 3 T33: 1.0767 T12: 0.0722 REMARK 3 T13: 0.3225 T23: -0.0406 REMARK 3 L TENSOR REMARK 3 L11: 4.4970 L22: 6.2141 REMARK 3 L33: 4.8137 L12: -3.7707 REMARK 3 L13: 2.6913 L23: -3.1751 REMARK 3 S TENSOR REMARK 3 S11: -0.1918 S12: 0.3729 S13: -1.3997 REMARK 3 S21: -0.1673 S22: -0.2155 S23: -3.0288 REMARK 3 S31: 2.3282 S32: 1.5264 S33: 0.3452 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 179 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1430 16.5819 12.9267 REMARK 3 T TENSOR REMARK 3 T11: 1.1166 T22: 0.6143 REMARK 3 T33: 0.8036 T12: -0.1364 REMARK 3 T13: 0.1199 T23: -0.1478 REMARK 3 L TENSOR REMARK 3 L11: 3.5114 L22: 6.0541 REMARK 3 L33: 5.9692 L12: -3.0689 REMARK 3 L13: 2.6072 L23: 1.4480 REMARK 3 S TENSOR REMARK 3 S11: -0.4917 S12: 1.2783 S13: -0.9550 REMARK 3 S21: -0.8781 S22: -0.1479 S23: 0.3087 REMARK 3 S31: -2.2846 S32: 1.0084 S33: 0.7568 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 189 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8051 13.1416 18.6051 REMARK 3 T TENSOR REMARK 3 T11: 0.7806 T22: 1.4730 REMARK 3 T33: 1.5692 T12: 0.0011 REMARK 3 T13: 0.1673 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 2.8710 L22: 2.0210 REMARK 3 L33: 3.8292 L12: -3.2238 REMARK 3 L13: -2.7842 L23: 0.4183 REMARK 3 S TENSOR REMARK 3 S11: -2.3543 S12: -0.2772 S13: 0.4535 REMARK 3 S21: -0.6126 S22: 0.0493 S23: -0.7709 REMARK 3 S31: 1.0537 S32: 2.0429 S33: -0.1408 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 199 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5022 13.0829 32.3049 REMARK 3 T TENSOR REMARK 3 T11: 1.6231 T22: 1.5365 REMARK 3 T33: 1.6569 T12: 0.1259 REMARK 3 T13: -0.3016 T23: 0.3013 REMARK 3 L TENSOR REMARK 3 L11: 4.4636 L22: 5.1931 REMARK 3 L33: 0.3500 L12: -4.0314 REMARK 3 L13: -0.3118 L23: 0.9330 REMARK 3 S TENSOR REMARK 3 S11: -0.0720 S12: 1.8839 S13: 0.5202 REMARK 3 S21: -1.9991 S22: 0.9515 S23: 0.4652 REMARK 3 S31: 0.6607 S32: -0.2655 S33: -0.3211 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 207 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7075 15.5816 25.9980 REMARK 3 T TENSOR REMARK 3 T11: 0.5660 T22: 0.9413 REMARK 3 T33: 0.8905 T12: -0.1313 REMARK 3 T13: 0.0361 T23: -0.1988 REMARK 3 L TENSOR REMARK 3 L11: 7.3893 L22: 7.1568 REMARK 3 L33: 7.0262 L12: -0.5550 REMARK 3 L13: -0.9910 L23: 1.7774 REMARK 3 S TENSOR REMARK 3 S11: 0.2226 S12: -0.5122 S13: 0.8503 REMARK 3 S21: 0.1667 S22: 0.6002 S23: -0.7774 REMARK 3 S31: -0.2230 S32: 1.1375 S33: -0.3106 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9903 20.8717 32.1025 REMARK 3 T TENSOR REMARK 3 T11: 0.7398 T22: 1.1964 REMARK 3 T33: 0.9109 T12: 0.0193 REMARK 3 T13: 0.0598 T23: -0.2288 REMARK 3 L TENSOR REMARK 3 L11: 3.9363 L22: 7.2452 REMARK 3 L33: 1.5751 L12: 5.3051 REMARK 3 L13: 1.0705 L23: 1.7595 REMARK 3 S TENSOR REMARK 3 S11: -0.5523 S12: -0.5661 S13: 1.3107 REMARK 3 S21: 0.5342 S22: 0.2624 S23: -0.7334 REMARK 3 S31: 0.3719 S32: 2.1216 S33: -0.6346 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 247 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1841 24.0173 27.2250 REMARK 3 T TENSOR REMARK 3 T11: 0.6518 T22: 0.7917 REMARK 3 T33: 1.0243 T12: 0.0453 REMARK 3 T13: 0.0139 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 6.7983 L22: 8.9168 REMARK 3 L33: 5.1726 L12: 1.0091 REMARK 3 L13: 3.4945 L23: 5.3247 REMARK 3 S TENSOR REMARK 3 S11: -0.3358 S12: -0.1990 S13: 1.0138 REMARK 3 S21: -0.2714 S22: -0.5574 S23: -1.0099 REMARK 3 S31: 0.3935 S32: -0.7751 S33: 0.2133 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 111 THROUGH 259) REMARK 3 SELECTION : (CHAIN B AND RESID 111 THROUGH 259) REMARK 3 ATOM PAIRS NUMBER : 1330 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GYY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010759. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9512 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.770 REMARK 200 RESOLUTION RANGE LOW (A) : 98.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 1.14700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6GYW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LICL, 0.1M NA-CACODYLATE PH 6.5, REMARK 280 30% PEG400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.43100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.40600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.88650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.40600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.43100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.88650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 95 REMARK 465 SER A 96 REMARK 465 HIS A 97 REMARK 465 MET A 98 REMARK 465 ALA A 99 REMARK 465 SER A 100 REMARK 465 PHE A 101 REMARK 465 LEU A 102 REMARK 465 LYS A 103 REMARK 465 ARG A 104 REMARK 465 TYR A 105 REMARK 465 THR A 106 REMARK 465 SER A 107 REMARK 465 ASN A 108 REMARK 465 THR A 109 REMARK 465 GLY A 260 REMARK 465 THR A 261 REMARK 465 ARG A 262 REMARK 465 PHE A 263 REMARK 465 GLN A 264 REMARK 465 LYS A 265 REMARK 465 LYS A 266 REMARK 465 GLY A 267 REMARK 465 VAL A 268 REMARK 465 LYS A 269 REMARK 465 GLY B 95 REMARK 465 SER B 96 REMARK 465 HIS B 97 REMARK 465 MET B 98 REMARK 465 ALA B 99 REMARK 465 SER B 100 REMARK 465 PHE B 101 REMARK 465 LEU B 102 REMARK 465 LYS B 103 REMARK 465 ARG B 104 REMARK 465 TYR B 105 REMARK 465 THR B 106 REMARK 465 SER B 107 REMARK 465 ASN B 108 REMARK 465 THR B 109 REMARK 465 TYR B 110 REMARK 465 THR B 261 REMARK 465 ARG B 262 REMARK 465 PHE B 263 REMARK 465 GLN B 264 REMARK 465 LYS B 265 REMARK 465 LYS B 266 REMARK 465 GLY B 267 REMARK 465 VAL B 268 REMARK 465 LYS B 269 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 112 CG CD CE NZ REMARK 480 ASP A 113 CG OD1 OD2 REMARK 480 GLU A 115 CG CD OE1 OE2 REMARK 480 LYS A 116 CG CD CE NZ REMARK 480 LYS A 123 CG CD CE NZ REMARK 480 LYS A 130 CD CE NZ REMARK 480 GLU A 142 CG CD OE1 OE2 REMARK 480 ASN A 171 CB CG OD1 ND2 REMARK 480 LYS A 185 CG CD CE NZ REMARK 480 TYR A 192 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 LYS A 203 CG CD CE NZ REMARK 480 SER A 204 CB OG REMARK 480 ARG A 210 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 228 CG CD OE1 OE2 REMARK 480 GLU A 229 CG CD OE1 OE2 REMARK 480 ASP A 232 CG OD1 OD2 REMARK 480 LYS A 240 CB CG CD CE NZ REMARK 480 GLU A 252 CB CG CD OE1 OE2 REMARK 480 GLU A 256 CB CG CD OE1 OE2 REMARK 480 LYS B 112 CG CD CE NZ REMARK 480 ASP B 113 CG OD1 OD2 REMARK 480 GLU B 115 CG CD OE1 OE2 REMARK 480 LYS B 116 CG CD CE NZ REMARK 480 LYS B 123 CG CD CE NZ REMARK 480 LYS B 130 CG CD CE NZ REMARK 480 ARG B 131 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 132 CG CD NE CZ NH1 NH2 REMARK 480 GLU B 142 CB CG CD OE1 OE2 REMARK 480 GLN B 146 CG CD OE1 NE2 REMARK 480 ASN B 171 CB CG OD1 ND2 REMARK 480 ASP B 176 CB CG OD1 OD2 REMARK 480 LYS B 185 CG CD CE NZ REMARK 480 TYR B 192 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR B 192 OH REMARK 480 SER B 196 CB OG REMARK 480 ASP B 197 CB CG OD1 OD2 REMARK 480 LYS B 200 CB CG CD CE NZ REMARK 480 ILE B 201 CB CG1 CG2 CD1 REMARK 480 SER B 202 CB OG REMARK 480 LYS B 203 CB CG CD CE NZ REMARK 480 SER B 204 CB OG REMARK 480 LEU B 205 CB CG CD1 CD2 REMARK 480 ARG B 210 CG CD NE CZ NH1 NH2 REMARK 480 ASP B 220 CG OD1 OD2 REMARK 480 GLU B 229 CG CD OE1 OE2 REMARK 480 ASP B 232 CB CG OD1 OD2 REMARK 480 LYS B 240 CB CG CD CE NZ REMARK 480 ASP B 244 CG OD1 OD2 REMARK 480 GLU B 248 CG CD OE1 OE2 REMARK 480 GLU B 256 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 172 SG CYS B 166 1.35 REMARK 500 SG CYS A 166 SG CYS B 172 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 132 O ARG B 243 3545 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 141 -83.33 -115.21 REMARK 500 LYS A 203 -8.83 77.21 REMARK 500 LYS B 112 -67.64 64.58 REMARK 500 LYS B 141 -86.64 -120.40 REMARK 500 ASN B 171 -1.28 86.69 REMARK 500 LYS B 203 -6.71 70.50 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6GYY A 100 269 UNP A0A2P7CAT2_STAAU DBREF2 6GYY A A0A2P7CAT2 100 269 DBREF1 6GYY B 100 269 UNP A0A2P7CAT2_STAAU DBREF2 6GYY B A0A2P7CAT2 100 269 SEQADV 6GYY GLY A 95 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY SER A 96 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY HIS A 97 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY MET A 98 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY ALA A 99 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY CYS A 166 UNP A0A2P7CAT ASN 166 CONFLICT SEQADV 6GYY CYS A 172 UNP A0A2P7CAT THR 172 CONFLICT SEQADV 6GYY GLY B 95 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY SER B 96 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY HIS B 97 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY MET B 98 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY ALA B 99 UNP A0A2P7CAT EXPRESSION TAG SEQADV 6GYY CYS B 166 UNP A0A2P7CAT ASN 166 ENGINEERED MUTATION SEQADV 6GYY CYS B 172 UNP A0A2P7CAT THR 172 ENGINEERED MUTATION SEQRES 1 A 175 GLY SER HIS MET ALA SER PHE LEU LYS ARG TYR THR SER SEQRES 2 A 175 ASN THR TYR SER LYS ASP GLU GLU LYS LEU ILE GLN SER SEQRES 3 A 175 VAL SER LYS ALA VAL GLN TYR MET ALA LYS ARG ARG ILE SEQRES 4 A 175 GLY ALA LEU ILE VAL PHE GLU LYS GLU THR GLY LEU GLN SEQRES 5 A 175 ASP TYR ILE GLU THR GLY ILE ALA MET ASP SER ASN ILE SEQRES 6 A 175 SER GLN GLU LEU LEU ILE CYS VAL PHE ILE PRO ASN CYS SEQRES 7 A 175 PRO LEU HIS ASP GLY ALA MET ILE ILE GLN GLY THR LYS SEQRES 8 A 175 ILE ALA ALA ALA ALA SER TYR LEU PRO LEU SER ASP SER SEQRES 9 A 175 PRO LYS ILE SER LYS SER LEU GLY THR ARG HIS ARG ALA SEQRES 10 A 175 ALA VAL GLY ILE SER GLU VAL SER ASP ALA PHE THR VAL SEQRES 11 A 175 ILE VAL SER GLU GLU THR GLY ASP ILE SER VAL THR PHE SEQRES 12 A 175 ASP GLY LYS LEU ARG ARG ASP ILE SER ASN GLU ILE PHE SEQRES 13 A 175 GLU GLU LEU LEU ALA GLU HIS TRP PHE GLY THR ARG PHE SEQRES 14 A 175 GLN LYS LYS GLY VAL LYS SEQRES 1 B 175 GLY SER HIS MET ALA SER PHE LEU LYS ARG TYR THR SER SEQRES 2 B 175 ASN THR TYR SER LYS ASP GLU GLU LYS LEU ILE GLN SER SEQRES 3 B 175 VAL SER LYS ALA VAL GLN TYR MET ALA LYS ARG ARG ILE SEQRES 4 B 175 GLY ALA LEU ILE VAL PHE GLU LYS GLU THR GLY LEU GLN SEQRES 5 B 175 ASP TYR ILE GLU THR GLY ILE ALA MET ASP SER ASN ILE SEQRES 6 B 175 SER GLN GLU LEU LEU ILE CYS VAL PHE ILE PRO ASN CYS SEQRES 7 B 175 PRO LEU HIS ASP GLY ALA MET ILE ILE GLN GLY THR LYS SEQRES 8 B 175 ILE ALA ALA ALA ALA SER TYR LEU PRO LEU SER ASP SER SEQRES 9 B 175 PRO LYS ILE SER LYS SER LEU GLY THR ARG HIS ARG ALA SEQRES 10 B 175 ALA VAL GLY ILE SER GLU VAL SER ASP ALA PHE THR VAL SEQRES 11 B 175 ILE VAL SER GLU GLU THR GLY ASP ILE SER VAL THR PHE SEQRES 12 B 175 ASP GLY LYS LEU ARG ARG ASP ILE SER ASN GLU ILE PHE SEQRES 13 B 175 GLU GLU LEU LEU ALA GLU HIS TRP PHE GLY THR ARG PHE SEQRES 14 B 175 GLN LYS LYS GLY VAL LYS HELIX 1 AA1 SER A 111 ARG A 131 1 21 HELIX 2 AA2 LEU A 145 GLU A 150 1 6 HELIX 3 AA3 SER A 160 PHE A 168 1 9 HELIX 4 AA4 GLY A 206 SER A 219 1 14 HELIX 5 AA5 SER A 246 PHE A 259 1 14 HELIX 6 AA6 LYS B 112 ARG B 131 1 20 HELIX 7 AA7 LEU B 145 GLU B 150 1 6 HELIX 8 AA8 SER B 160 PHE B 168 1 9 HELIX 9 AA9 GLY B 206 SER B 219 1 14 HELIX 10 AB1 SER B 246 GLY B 260 1 15 SHEET 1 AA1 7 ILE A 153 SER A 157 0 SHEET 2 AA1 7 LYS A 185 SER A 191 -1 O ILE A 186 N SER A 157 SHEET 3 AA1 7 ALA A 178 GLN A 182 -1 N ILE A 180 O ALA A 188 SHEET 4 AA1 7 ALA A 135 PHE A 139 1 N VAL A 138 O ILE A 181 SHEET 5 AA1 7 PHE A 222 VAL A 226 -1 O PHE A 222 N PHE A 139 SHEET 6 AA1 7 ILE A 233 PHE A 237 -1 O SER A 234 N ILE A 225 SHEET 7 AA1 7 LYS A 240 ARG A 242 -1 O ARG A 242 N VAL A 235 SHEET 1 AA2 7 ILE B 153 ASN B 158 0 SHEET 2 AA2 7 LYS B 185 SER B 191 -1 O ILE B 186 N SER B 157 SHEET 3 AA2 7 ALA B 178 GLN B 182 -1 N ILE B 180 O ALA B 188 SHEET 4 AA2 7 ALA B 135 PHE B 139 1 N VAL B 138 O MET B 179 SHEET 5 AA2 7 PHE B 222 VAL B 226 -1 O PHE B 222 N PHE B 139 SHEET 6 AA2 7 ILE B 233 PHE B 237 -1 O SER B 234 N ILE B 225 SHEET 7 AA2 7 LYS B 240 ARG B 242 -1 O ARG B 242 N VAL B 235 CRYST1 44.862 79.773 98.812 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022290 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012536 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010120 0.00000