HEADER OXIDOREDUCTASE 12-JUL-18 6H1O TITLE STRUCTURE OF THE BM3 HEME DOMAIN IN COMPLEX WITH VORICONAZOLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL CYTOCHROME P450/NADPH--P450 REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CYTOCHROME P450(BM-3),CYTOCHROME P450BM-3,FATTY ACID COMPND 5 MONOOXYGENASE,FLAVOCYTOCHROME P450 BM3; COMPND 6 EC: 1.14.14.1,1.6.2.4; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS MEGATERIUM; SOURCE 3 ORGANISM_TAXID: 1404; SOURCE 4 STRAIN: ATCC 14581 / DSM 32 / JCM 2506 / NBRC 15308 / NCIMB 9376 / SOURCE 5 NCTC 10342 / VKM B-512; SOURCE 6 GENE: CYP102A1, CYP102, BG04_163; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS P450, AZOLE INHIBITOR, HEME LIGATION, P450 BM3, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.N.JEFFREYS,A.W.M.MUNRO,D.LEYS REVDAT 2 17-JAN-24 6H1O 1 LINK REVDAT 1 20-FEB-19 6H1O 0 JRNL AUTH L.N.JEFFREYS,H.PODDAR,M.GOLOVANOVA,C.W.LEVY,H.M.GIRVAN, JRNL AUTH 2 K.J.MCLEAN,M.W.VOICE,D.LEYS,A.W.MUNRO JRNL TITL NOVEL INSIGHTS INTO P450 BM3 INTERACTIONS WITH FDA-APPROVED JRNL TITL 2 ANTIFUNGAL AZOLE DRUGS. JRNL REF SCI REP V. 9 1577 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30733479 JRNL DOI 10.1038/S41598-018-37330-Y REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 99892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 4831 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.6701 - 5.3876 0.95 3355 185 0.1564 0.1754 REMARK 3 2 5.3876 - 4.2766 0.94 3309 173 0.1424 0.1630 REMARK 3 3 4.2766 - 3.7361 0.95 3346 163 0.1326 0.1629 REMARK 3 4 3.7361 - 3.3946 0.93 3298 128 0.1543 0.2078 REMARK 3 5 3.3946 - 3.1513 0.95 3339 164 0.1643 0.2171 REMARK 3 6 3.1513 - 2.9655 0.96 3315 216 0.1708 0.2029 REMARK 3 7 2.9655 - 2.8170 0.96 3358 180 0.1728 0.2040 REMARK 3 8 2.8170 - 2.6944 0.96 3376 168 0.1714 0.1880 REMARK 3 9 2.6944 - 2.5906 0.96 3372 169 0.1690 0.2224 REMARK 3 10 2.5906 - 2.5012 0.97 3384 178 0.1717 0.2145 REMARK 3 11 2.5012 - 2.4230 0.97 3388 179 0.1616 0.1950 REMARK 3 12 2.4230 - 2.3538 0.97 3390 166 0.1602 0.1970 REMARK 3 13 2.3538 - 2.2918 0.98 3441 169 0.1606 0.1844 REMARK 3 14 2.2918 - 2.2359 0.59 2003 139 0.1632 0.2547 REMARK 3 15 2.2359 - 2.1850 0.95 3300 181 0.1645 0.2228 REMARK 3 16 2.1850 - 2.1385 0.98 3490 151 0.1660 0.2080 REMARK 3 17 2.1385 - 2.0958 0.97 3377 160 0.1631 0.2001 REMARK 3 18 2.0958 - 2.0562 0.45 1572 73 0.1690 0.2088 REMARK 3 19 2.0562 - 2.0195 0.94 3290 182 0.1605 0.2066 REMARK 3 20 2.0195 - 1.9853 0.98 3422 167 0.1606 0.2070 REMARK 3 21 1.9853 - 1.9532 0.97 3354 192 0.1601 0.1985 REMARK 3 22 1.9532 - 1.9232 0.87 2934 150 0.1735 0.2389 REMARK 3 23 1.9232 - 1.8949 0.82 1241 65 0.1967 0.2031 REMARK 3 24 1.8949 - 1.8682 0.98 3432 158 0.1746 0.2166 REMARK 3 25 1.8682 - 1.8429 0.96 3352 161 0.1855 0.2656 REMARK 3 26 1.8429 - 1.8190 0.97 3392 181 0.1846 0.2533 REMARK 3 27 1.8190 - 1.7963 0.95 3331 142 0.1810 0.2203 REMARK 3 28 1.7963 - 1.7746 0.94 3301 160 0.1879 0.2500 REMARK 3 29 1.7746 - 1.7540 0.95 3320 156 0.1913 0.2456 REMARK 3 30 1.7540 - 1.7343 0.93 3279 175 0.2118 0.2531 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7814 REMARK 3 ANGLE : 1.068 10594 REMARK 3 CHIRALITY : 0.060 1114 REMARK 3 PLANARITY : 0.007 1375 REMARK 3 DIHEDRAL : 12.693 4684 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99892 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 60.633 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4KF2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG, 5MM LIGAND (DISSOLVED IN 100% REMARK 280 DMSO), 25MM POTASSIUM PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 75.00450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1A HEM A 501 O1 GOL A 508 1.25 REMARK 500 CGA HEM A 501 O1 GOL A 508 2.07 REMARK 500 OD1 ASP A 199 N PHE A 205 2.11 REMARK 500 O GLN A 189 OH TYR A 198 2.14 REMARK 500 O ASP A 195 ND2 ASN A 201 2.16 REMARK 500 NH1 ARG B 296 O HOH B 601 2.17 REMARK 500 O HOH B 660 O HOH B 972 2.18 REMARK 500 NE2 GLN A 169 O HOH A 601 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 608 O HOH A 855 1455 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 199 CB - CG - OD1 ANGL. DEV. = -10.4 DEGREES REMARK 500 ASP A 199 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 15 -129.28 55.35 REMARK 500 PRO A 45 108.89 -49.95 REMARK 500 ASP A 84 35.72 -97.89 REMARK 500 ASP A 136 -1.01 71.37 REMARK 500 LEU A 188 6.12 -64.02 REMARK 500 ARG A 190 87.43 93.29 REMARK 500 PRO A 193 27.58 -77.35 REMARK 500 ASP A 195 -62.23 -22.31 REMARK 500 ALA A 197 -94.37 61.29 REMARK 500 TYR A 198 -50.68 -146.92 REMARK 500 LYS A 202 17.60 56.22 REMARK 500 GLU A 244 -70.09 -78.47 REMARK 500 GLU A 344 -22.43 -141.52 REMARK 500 ASP A 370 34.49 -86.11 REMARK 500 THR A 436 -119.79 -114.33 REMARK 500 LYS B 15 -128.41 51.61 REMARK 500 ASP B 136 -4.83 72.41 REMARK 500 ASN B 192 75.77 -119.57 REMARK 500 ASP B 370 36.89 -80.57 REMARK 500 THR B 436 -123.27 -113.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 189 ARG A 190 147.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 400 SG REMARK 620 2 HEM A 501 NA 95.4 REMARK 620 3 HEM A 501 NB 87.4 91.6 REMARK 620 4 HEM A 501 NC 84.8 179.6 88.8 REMARK 620 5 HEM A 501 ND 90.4 88.2 177.7 91.5 REMARK 620 6 VOR A 502 N9 171.8 92.6 90.4 87.2 91.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 400 SG REMARK 620 2 HEM B 501 NA 96.5 REMARK 620 3 HEM B 501 NB 86.7 91.4 REMARK 620 4 HEM B 501 NC 83.7 179.5 89.1 REMARK 620 5 HEM B 501 ND 92.6 89.5 179.0 90.1 REMARK 620 6 VOR B 502 N9 171.1 91.9 90.3 87.9 90.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VOR A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VOR B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 DBREF 6H1O A 1 457 UNP P14779 CPXB_BACMB 2 458 DBREF 6H1O B 1 457 UNP P14779 CPXB_BACMB 2 458 SEQADV 6H1O PHE A 82 UNP P14779 ALA 83 ENGINEERED MUTATION SEQADV 6H1O VAL A 87 UNP P14779 PHE 88 ENGINEERED MUTATION SEQADV 6H1O PHE B 82 UNP P14779 ALA 83 ENGINEERED MUTATION SEQADV 6H1O VAL B 87 UNP P14779 PHE 88 ENGINEERED MUTATION SEQRES 1 A 457 THR ILE LYS GLU MET PRO GLN PRO LYS THR PHE GLY GLU SEQRES 2 A 457 LEU LYS ASN LEU PRO LEU LEU ASN THR ASP LYS PRO VAL SEQRES 3 A 457 GLN ALA LEU MET LYS ILE ALA ASP GLU LEU GLY GLU ILE SEQRES 4 A 457 PHE LYS PHE GLU ALA PRO GLY ARG VAL THR ARG TYR LEU SEQRES 5 A 457 SER SER GLN ARG LEU ILE LYS GLU ALA CYS ASP GLU SER SEQRES 6 A 457 ARG PHE ASP LYS ASN LEU SER GLN ALA LEU LYS PHE VAL SEQRES 7 A 457 ARG ASP PHE PHE GLY ASP GLY LEU VAL THR SER TRP THR SEQRES 8 A 457 HIS GLU LYS ASN TRP LYS LYS ALA HIS ASN ILE LEU LEU SEQRES 9 A 457 PRO SER PHE SER GLN GLN ALA MET LYS GLY TYR HIS ALA SEQRES 10 A 457 MET MET VAL ASP ILE ALA VAL GLN LEU VAL GLN LYS TRP SEQRES 11 A 457 GLU ARG LEU ASN ALA ASP GLU HIS ILE GLU VAL PRO GLU SEQRES 12 A 457 ASP MET THR ARG LEU THR LEU ASP THR ILE GLY LEU CYS SEQRES 13 A 457 GLY PHE ASN TYR ARG PHE ASN SER PHE TYR ARG ASP GLN SEQRES 14 A 457 PRO HIS PRO PHE ILE THR SER MET VAL ARG ALA LEU ASP SEQRES 15 A 457 GLU ALA MET ASN LYS LEU GLN ARG ALA ASN PRO ASP ASP SEQRES 16 A 457 PRO ALA TYR ASP GLU ASN LYS ARG GLN PHE GLN GLU ASP SEQRES 17 A 457 ILE LYS VAL MET ASN ASP LEU VAL ASP LYS ILE ILE ALA SEQRES 18 A 457 ASP ARG LYS ALA SER GLY GLU GLN SER ASP ASP LEU LEU SEQRES 19 A 457 THR HIS MET LEU ASN GLY LYS ASP PRO GLU THR GLY GLU SEQRES 20 A 457 PRO LEU ASP ASP GLU ASN ILE ARG TYR GLN ILE ILE THR SEQRES 21 A 457 PHE LEU ILE ALA GLY HIS GLU THR THR SER GLY LEU LEU SEQRES 22 A 457 SER PHE ALA LEU TYR PHE LEU VAL LYS ASN PRO HIS VAL SEQRES 23 A 457 LEU GLN LYS ALA ALA GLU GLU ALA ALA ARG VAL LEU VAL SEQRES 24 A 457 ASP PRO VAL PRO SER TYR LYS GLN VAL LYS GLN LEU LYS SEQRES 25 A 457 TYR VAL GLY MET VAL LEU ASN GLU ALA LEU ARG LEU TRP SEQRES 26 A 457 PRO THR ALA PRO ALA PHE SER LEU TYR ALA LYS GLU ASP SEQRES 27 A 457 THR VAL LEU GLY GLY GLU TYR PRO LEU GLU LYS GLY ASP SEQRES 28 A 457 GLU LEU MET VAL LEU ILE PRO GLN LEU HIS ARG ASP LYS SEQRES 29 A 457 THR ILE TRP GLY ASP ASP VAL GLU GLU PHE ARG PRO GLU SEQRES 30 A 457 ARG PHE GLU ASN PRO SER ALA ILE PRO GLN HIS ALA PHE SEQRES 31 A 457 LYS PRO PHE GLY ASN GLY GLN ARG ALA CYS ILE GLY GLN SEQRES 32 A 457 GLN PHE ALA LEU HIS GLU ALA THR LEU VAL LEU GLY MET SEQRES 33 A 457 MET LEU LYS HIS PHE ASP PHE GLU ASP HIS THR ASN TYR SEQRES 34 A 457 GLU LEU ASP ILE LYS GLU THR LEU THR LEU LYS PRO GLU SEQRES 35 A 457 GLY PHE VAL VAL LYS ALA LYS SER LYS LYS ILE PRO LEU SEQRES 36 A 457 GLY GLY SEQRES 1 B 457 THR ILE LYS GLU MET PRO GLN PRO LYS THR PHE GLY GLU SEQRES 2 B 457 LEU LYS ASN LEU PRO LEU LEU ASN THR ASP LYS PRO VAL SEQRES 3 B 457 GLN ALA LEU MET LYS ILE ALA ASP GLU LEU GLY GLU ILE SEQRES 4 B 457 PHE LYS PHE GLU ALA PRO GLY ARG VAL THR ARG TYR LEU SEQRES 5 B 457 SER SER GLN ARG LEU ILE LYS GLU ALA CYS ASP GLU SER SEQRES 6 B 457 ARG PHE ASP LYS ASN LEU SER GLN ALA LEU LYS PHE VAL SEQRES 7 B 457 ARG ASP PHE PHE GLY ASP GLY LEU VAL THR SER TRP THR SEQRES 8 B 457 HIS GLU LYS ASN TRP LYS LYS ALA HIS ASN ILE LEU LEU SEQRES 9 B 457 PRO SER PHE SER GLN GLN ALA MET LYS GLY TYR HIS ALA SEQRES 10 B 457 MET MET VAL ASP ILE ALA VAL GLN LEU VAL GLN LYS TRP SEQRES 11 B 457 GLU ARG LEU ASN ALA ASP GLU HIS ILE GLU VAL PRO GLU SEQRES 12 B 457 ASP MET THR ARG LEU THR LEU ASP THR ILE GLY LEU CYS SEQRES 13 B 457 GLY PHE ASN TYR ARG PHE ASN SER PHE TYR ARG ASP GLN SEQRES 14 B 457 PRO HIS PRO PHE ILE THR SER MET VAL ARG ALA LEU ASP SEQRES 15 B 457 GLU ALA MET ASN LYS LEU GLN ARG ALA ASN PRO ASP ASP SEQRES 16 B 457 PRO ALA TYR ASP GLU ASN LYS ARG GLN PHE GLN GLU ASP SEQRES 17 B 457 ILE LYS VAL MET ASN ASP LEU VAL ASP LYS ILE ILE ALA SEQRES 18 B 457 ASP ARG LYS ALA SER GLY GLU GLN SER ASP ASP LEU LEU SEQRES 19 B 457 THR HIS MET LEU ASN GLY LYS ASP PRO GLU THR GLY GLU SEQRES 20 B 457 PRO LEU ASP ASP GLU ASN ILE ARG TYR GLN ILE ILE THR SEQRES 21 B 457 PHE LEU ILE ALA GLY HIS GLU THR THR SER GLY LEU LEU SEQRES 22 B 457 SER PHE ALA LEU TYR PHE LEU VAL LYS ASN PRO HIS VAL SEQRES 23 B 457 LEU GLN LYS ALA ALA GLU GLU ALA ALA ARG VAL LEU VAL SEQRES 24 B 457 ASP PRO VAL PRO SER TYR LYS GLN VAL LYS GLN LEU LYS SEQRES 25 B 457 TYR VAL GLY MET VAL LEU ASN GLU ALA LEU ARG LEU TRP SEQRES 26 B 457 PRO THR ALA PRO ALA PHE SER LEU TYR ALA LYS GLU ASP SEQRES 27 B 457 THR VAL LEU GLY GLY GLU TYR PRO LEU GLU LYS GLY ASP SEQRES 28 B 457 GLU LEU MET VAL LEU ILE PRO GLN LEU HIS ARG ASP LYS SEQRES 29 B 457 THR ILE TRP GLY ASP ASP VAL GLU GLU PHE ARG PRO GLU SEQRES 30 B 457 ARG PHE GLU ASN PRO SER ALA ILE PRO GLN HIS ALA PHE SEQRES 31 B 457 LYS PRO PHE GLY ASN GLY GLN ARG ALA CYS ILE GLY GLN SEQRES 32 B 457 GLN PHE ALA LEU HIS GLU ALA THR LEU VAL LEU GLY MET SEQRES 33 B 457 MET LEU LYS HIS PHE ASP PHE GLU ASP HIS THR ASN TYR SEQRES 34 B 457 GLU LEU ASP ILE LYS GLU THR LEU THR LEU LYS PRO GLU SEQRES 35 B 457 GLY PHE VAL VAL LYS ALA LYS SER LYS LYS ILE PRO LEU SEQRES 36 B 457 GLY GLY HET HEM A 501 43 HET VOR A 502 25 HET PO4 A 503 5 HET PO4 A 504 5 HET PO4 A 505 5 HET GOL A 506 12 HET GOL A 507 6 HET GOL A 508 6 HET EDO A 509 4 HET HEM B 501 43 HET VOR B 502 25 HET PO4 B 503 5 HET PO4 B 504 5 HET GOL B 505 6 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM VOR VORICONAZOLE HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN HEM HEME HETSYN VOR (2R,3S)-2-(2,4-DIFLUOROPHENYL)-3-(5-FLUOROPYRIMIDIN-4- HETSYN 2 VOR YL)-1-(1H-1,2,4-TRIAZOL-1-YL)BUTAN-2-OL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 VOR 2(C16 H14 F3 N5 O) FORMUL 5 PO4 5(O4 P 3-) FORMUL 8 GOL 4(C3 H8 O3) FORMUL 11 EDO C2 H6 O2 FORMUL 17 HOH *715(H2 O) HELIX 1 AA1 PHE A 11 LYS A 15 5 5 HELIX 2 AA2 ASN A 16 ASN A 21 5 6 HELIX 3 AA3 LYS A 24 GLY A 37 1 14 HELIX 4 AA4 SER A 54 CYS A 62 1 9 HELIX 5 AA5 SER A 72 GLY A 83 1 12 HELIX 6 AA6 GLU A 93 LEU A 104 1 12 HELIX 7 AA7 PRO A 105 PHE A 107 5 3 HELIX 8 AA8 SER A 108 ARG A 132 1 25 HELIX 9 AA9 VAL A 141 ASN A 159 1 19 HELIX 10 AB1 ASN A 163 ARG A 167 5 5 HELIX 11 AB2 HIS A 171 LEU A 188 1 18 HELIX 12 AB3 LYS A 202 ALA A 225 1 24 HELIX 13 AB4 ASP A 232 GLY A 240 1 9 HELIX 14 AB5 ASP A 250 GLY A 265 1 16 HELIX 15 AB6 HIS A 266 ASN A 283 1 18 HELIX 16 AB7 ASN A 283 LEU A 298 1 16 HELIX 17 AB8 SER A 304 GLN A 310 1 7 HELIX 18 AB9 LEU A 311 TRP A 325 1 15 HELIX 19 AC1 ILE A 357 HIS A 361 1 5 HELIX 20 AC2 ASP A 363 GLY A 368 1 6 HELIX 21 AC3 ARG A 375 GLU A 380 5 6 HELIX 22 AC4 ASN A 381 ILE A 385 5 5 HELIX 23 AC5 ASN A 395 ALA A 399 5 5 HELIX 24 AC6 GLY A 402 HIS A 420 1 19 HELIX 25 AC7 PHE B 11 LYS B 15 5 5 HELIX 26 AC8 ASN B 16 ASN B 21 5 6 HELIX 27 AC9 LYS B 24 GLY B 37 1 14 HELIX 28 AD1 SER B 54 CYS B 62 1 9 HELIX 29 AD2 SER B 72 GLY B 83 1 12 HELIX 30 AD3 GLU B 93 LEU B 104 1 12 HELIX 31 AD4 PRO B 105 PHE B 107 5 3 HELIX 32 AD5 SER B 108 ARG B 132 1 25 HELIX 33 AD6 VAL B 141 ASN B 159 1 19 HELIX 34 AD7 ASN B 163 ARG B 167 5 5 HELIX 35 AD8 HIS B 171 LEU B 188 1 18 HELIX 36 AD9 ASP B 195 ALA B 197 5 3 HELIX 37 AE1 TYR B 198 SER B 226 1 29 HELIX 38 AE2 ASP B 232 GLY B 240 1 9 HELIX 39 AE3 ASP B 250 GLY B 265 1 16 HELIX 40 AE4 HIS B 266 ASN B 283 1 18 HELIX 41 AE5 ASN B 283 LEU B 298 1 16 HELIX 42 AE6 SER B 304 GLN B 310 1 7 HELIX 43 AE7 LEU B 311 TRP B 325 1 15 HELIX 44 AE8 ILE B 357 HIS B 361 1 5 HELIX 45 AE9 ASP B 363 GLY B 368 1 6 HELIX 46 AF1 ARG B 375 GLU B 380 5 6 HELIX 47 AF2 ASN B 381 ILE B 385 5 5 HELIX 48 AF3 ASN B 395 ALA B 399 5 5 HELIX 49 AF4 GLY B 402 HIS B 420 1 19 SHEET 1 AA1 5 ILE A 39 ALA A 44 0 SHEET 2 AA1 5 ARG A 47 LEU A 52 -1 O THR A 49 N PHE A 42 SHEET 3 AA1 5 GLU A 352 LEU A 356 1 O MET A 354 N ARG A 50 SHEET 4 AA1 5 ALA A 330 ALA A 335 -1 N PHE A 331 O VAL A 355 SHEET 5 AA1 5 PHE A 67 LYS A 69 -1 N ASP A 68 O TYR A 334 SHEET 1 AA2 3 ILE A 139 GLU A 140 0 SHEET 2 AA2 3 VAL A 445 SER A 450 -1 O VAL A 446 N ILE A 139 SHEET 3 AA2 3 PHE A 421 GLU A 424 -1 N ASP A 422 O LYS A 449 SHEET 1 AA3 2 THR A 339 LEU A 341 0 SHEET 2 AA3 2 TYR A 345 LEU A 347 -1 O LEU A 347 N THR A 339 SHEET 1 AA4 2 ILE A 433 GLU A 435 0 SHEET 2 AA4 2 LEU A 439 PRO A 441 -1 O LYS A 440 N LYS A 434 SHEET 1 AA5 5 ILE B 39 ALA B 44 0 SHEET 2 AA5 5 ARG B 47 LEU B 52 -1 O THR B 49 N PHE B 42 SHEET 3 AA5 5 GLU B 352 LEU B 356 1 O MET B 354 N LEU B 52 SHEET 4 AA5 5 ALA B 330 ALA B 335 -1 N PHE B 331 O VAL B 355 SHEET 5 AA5 5 PHE B 67 ASN B 70 -1 N ASN B 70 O SER B 332 SHEET 1 AA6 3 ILE B 139 GLU B 140 0 SHEET 2 AA6 3 VAL B 445 SER B 450 -1 O VAL B 446 N ILE B 139 SHEET 3 AA6 3 PHE B 421 GLU B 424 -1 N ASP B 422 O LYS B 449 SHEET 1 AA7 2 THR B 339 LEU B 341 0 SHEET 2 AA7 2 TYR B 345 LEU B 347 -1 O LEU B 347 N THR B 339 SHEET 1 AA8 2 ILE B 433 GLU B 435 0 SHEET 2 AA8 2 LEU B 439 PRO B 441 -1 O LYS B 440 N LYS B 434 LINK SG CYS A 400 FE HEM A 501 1555 1555 2.35 LINK FE HEM A 501 N9 VOR A 502 1555 1555 2.18 LINK SG CYS B 400 FE HEM B 501 1555 1555 2.33 LINK FE HEM B 501 N9 VOR B 502 1555 1555 2.17 SITE 1 AC1 29 LYS A 69 LEU A 75 LEU A 86 VAL A 87 SITE 2 AC1 29 TRP A 96 PHE A 107 PHE A 261 ALA A 264 SITE 3 AC1 29 GLY A 265 THR A 268 THR A 269 THR A 327 SITE 4 AC1 29 PHE A 331 PRO A 392 PHE A 393 GLY A 394 SITE 5 AC1 29 ARG A 398 ALA A 399 CYS A 400 ILE A 401 SITE 6 AC1 29 GLY A 402 ALA A 406 VOR A 502 GOL A 508 SITE 7 AC1 29 HOH A 633 HOH A 638 HOH A 685 HOH A 697 SITE 8 AC1 29 HOH A 719 SITE 1 AC2 9 PHE A 82 VAL A 87 THR A 260 ILE A 263 SITE 2 AC2 9 ALA A 264 GLU A 267 THR A 268 HEM A 501 SITE 3 AC2 9 GOL A 508 SITE 1 AC3 3 ILE A 366 ARG A 378 ALA A 384 SITE 1 AC4 3 VAL A 281 LYS A 282 ASP A 425 SITE 1 AC5 3 GLU A 137 HIS A 138 HOH A 720 SITE 1 AC6 10 LYS A 97 HIS A 100 ASN A 101 HOH A 630 SITE 2 AC6 10 HOH A 659 ILE B 366 ARG B 378 ALA B 384 SITE 3 AC6 10 ILE B 385 PRO B 386 SITE 1 AC7 1 ARG A 132 SITE 1 AC8 6 LEU A 75 ALA A 330 HEM A 501 VOR A 502 SITE 2 AC8 6 HOH A 619 HOH A 685 SITE 1 AC9 3 PHE A 81 ASN A 213 ILE A 259 SITE 1 AD1 27 LYS B 69 LEU B 75 LEU B 86 VAL B 87 SITE 2 AD1 27 TRP B 96 PHE B 261 ALA B 264 GLY B 265 SITE 3 AD1 27 THR B 268 THR B 269 THR B 327 PHE B 331 SITE 4 AD1 27 PRO B 392 PHE B 393 GLY B 394 ARG B 398 SITE 5 AD1 27 ALA B 399 CYS B 400 ILE B 401 GLY B 402 SITE 6 AD1 27 VOR B 502 HOH B 623 HOH B 647 HOH B 689 SITE 7 AD1 27 HOH B 722 HOH B 785 HOH B 876 SITE 1 AD2 12 LEU B 75 PHE B 82 VAL B 87 LEU B 181 SITE 2 AD2 12 ILE B 263 ALA B 264 GLU B 267 THR B 268 SITE 3 AD2 12 LEU B 437 HEM B 501 HOH B 755 HOH B 824 SITE 1 AD3 5 ASP B 80 PHE B 81 PHE B 205 ILE B 209 SITE 2 AD3 5 HOH B 802 SITE 1 AD4 5 GLU A 4 GLU B 247 THR B 427 ASN B 428 SITE 2 AD4 5 HOH B 709 SITE 1 AD5 5 VAL B 281 ASP B 425 ASN B 428 HOH B 615 SITE 2 AD5 5 HOH B 817 CRYST1 59.853 150.009 61.069 90.00 96.85 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016708 0.000000 0.002007 0.00000 SCALE2 0.000000 0.006666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016493 0.00000