HEADER TRANSFERASE 19-JUL-18 6H3K TITLE INTRODUCTION OF A METHYL GROUP CURBS METABOLISM OF PYRIDO[3,4- TITLE 2 D]PYRIMIDINE MPS1 INHIBITORS AND ENABLES THE DISCOVERY OF THE PHASE 1 TITLE 3 CLINICAL CANDIDATE BOS172722. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PROTEIN KINASE TTK; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE,PYT; COMPND 5 EC: 2.7.12.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TTK, MPS1, MPS1L1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, SPINDLE ASSEMBLY CHECKPOINT, MITOSIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.L.WOODWARD,S.HOELDER REVDAT 2 10-OCT-18 6H3K 1 JRNL REVDAT 1 19-SEP-18 6H3K 0 JRNL AUTH H.L.WOODWARD,P.INNOCENTI,K.J.CHEUNG,A.HAYES,J.ROBERTS, JRNL AUTH 2 A.T.HENLEY,A.FAISAL,G.W.MAK,G.BOX,I.M.WESTWOOD,N.CRONIN, JRNL AUTH 3 M.CARTER,M.VALENTI,A.DE HAVEN BRANDON,L.O'FEE,H.SAVILLE, JRNL AUTH 4 J.SCHMITT,R.BURKE,F.BROCCATELLI,R.L.M.VAN MONTFORT, JRNL AUTH 5 F.I.RAYNAUD,S.A.ECCLES,S.LINARDOPOULOS,J.BLAGG,S.HOELDER JRNL TITL INTRODUCTION OF A METHYL GROUP CURBS METABOLISM OF JRNL TITL 2 PYRIDO[3,4- D]PYRIMIDINE MONOPOLAR SPINDLE 1 (MPS1) JRNL TITL 3 INHIBITORS AND ENABLES THE DISCOVERY OF THE PHASE 1 CLINICAL JRNL TITL 4 CANDIDATE N2-(2-ETHOXY-4-(4-METHYL-4 JRNL TITL 5 H-1,2,4-TRIAZOL-3-YL)PHENYL)-6-METHYL- JRNL TITL 6 N8-NEOPENTYLPYRIDO[3,4- D]PYRIMIDINE-2,8-DIAMINE JRNL TITL 7 (BOS172722). JRNL REF J. MED. CHEM. V. 61 8226 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 30199249 JRNL DOI 10.1021/ACS.JMEDCHEM.8B00690 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 16023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 798 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 39 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.50 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.27 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 411 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3069 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 392 REMARK 3 BIN R VALUE (WORKING SET) : 0.3079 REMARK 3 BIN FREE R VALUE : 0.2871 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.62 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 19 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2003 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 37 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 103.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 27.13640 REMARK 3 B22 (A**2) : -14.51630 REMARK 3 B33 (A**2) : -12.62010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.450 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.266 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.204 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.268 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.206 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2089 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2840 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 707 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 376 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2089 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 278 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2132 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.14 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.73 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -4.5872 -37.5148 -22.0688 REMARK 3 T TENSOR REMARK 3 T11: -0.2766 T22: -0.0845 REMARK 3 T33: -0.1028 T12: -0.0228 REMARK 3 T13: 0.0639 T23: 0.2537 REMARK 3 L TENSOR REMARK 3 L11: 7.3510 L22: 2.2797 REMARK 3 L33: 3.0268 L12: 0.6976 REMARK 3 L13: 1.1305 L23: 0.0754 REMARK 3 S TENSOR REMARK 3 S11: 0.0824 S12: -0.7101 S13: -1.0018 REMARK 3 S21: 0.0638 S22: -0.0309 S23: 0.2722 REMARK 3 S31: 0.0842 S32: -0.0828 S33: -0.0515 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H3K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010983. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12793 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 60.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 1.78000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE; 0.1 M MGCL2 REMARK 280 0.1 M SODIUM FORMATE 18-26% PEG3350, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.81200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.82200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.34150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.81200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.82200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.34150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.81200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.82200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.34150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.81200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.82200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.34150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 935 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 674 REMARK 465 THR A 675 REMARK 465 THR A 676 REMARK 465 SER A 677 REMARK 465 VAL A 678 REMARK 465 VAL A 679 REMARK 465 LYS A 680 REMARK 465 ASP A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 VAL A 684 REMARK 465 GLY A 685 REMARK 465 SER A 699 REMARK 465 SER A 700 REMARK 465 SER A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 ASN A 704 REMARK 465 GLY A 705 REMARK 465 LYS A 706 REMARK 465 SER A 707 REMARK 465 LYS A 708 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 523 CD NE CZ NH1 NH2 REMARK 470 LYS A 538 CD CE NZ REMARK 470 GLU A 545 CG CD OE1 OE2 REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 LYS A 547 CG CD CE NZ REMARK 470 GLU A 559 CG CD OE1 OE2 REMARK 470 GLN A 563 CG CD OE1 NE2 REMARK 470 GLN A 580 CD OE1 NE2 REMARK 470 LYS A 584 CG CD CE NZ REMARK 470 LYS A 614 CE NZ REMARK 470 LYS A 615 CG CD CE NZ REMARK 470 LYS A 616 CG CD CE NZ REMARK 470 LYS A 617 CG CD CE NZ REMARK 470 ILE A 619 CG1 CG2 CD1 REMARK 470 TRP A 622 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 622 CZ3 CH2 REMARK 470 LYS A 629 CG CD CE NZ REMARK 470 ASP A 657 CG OD1 OD2 REMARK 470 GLN A 670 CG CD OE1 NE2 REMARK 470 GLN A 672 CG CD OE1 NE2 REMARK 470 LYS A 696 CE NZ REMARK 470 GLN A 736 CG CD OE1 NE2 REMARK 470 ILE A 741 CD1 REMARK 470 LEU A 744 CG CD1 CD2 REMARK 470 ILE A 748 CD1 REMARK 470 ILE A 754 CD1 REMARK 470 ILE A 759 CD1 REMARK 470 LYS A 769 CG CD CE NZ REMARK 470 LYS A 773 CD CE NZ REMARK 470 LYS A 777 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 762 C - N - CA ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 521 -79.64 61.47 REMARK 500 ASP A 647 33.66 -146.33 REMARK 500 ILE A 711 -167.88 -124.84 REMARK 500 LYS A 762 -94.29 116.69 REMARK 500 LEU A 772 31.20 -90.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 7PE A 802 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMW A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7PE A 802 DBREF 6H3K A 519 794 UNP P33981 TTK_HUMAN 518 793 SEQADV 6H3K GLN A 516 UNP P33981 EXPRESSION TAG SEQADV 6H3K SER A 517 UNP P33981 EXPRESSION TAG SEQADV 6H3K MET A 518 UNP P33981 EXPRESSION TAG SEQRES 1 A 279 GLN SER MET SER VAL LYS GLY ARG ILE TYR SER ILE LEU SEQRES 2 A 279 LYS GLN ILE GLY SER GLY GLY SER SER LYS VAL PHE GLN SEQRES 3 A 279 VAL LEU ASN GLU LYS LYS GLN ILE TYR ALA ILE LYS TYR SEQRES 4 A 279 VAL ASN LEU GLU GLU ALA ASP ASN GLN THR LEU ASP SER SEQRES 5 A 279 TYR ARG ASN GLU ILE ALA TYR LEU ASN LYS LEU GLN GLN SEQRES 6 A 279 HIS SER ASP LYS ILE ILE ARG LEU TYR ASP TYR GLU ILE SEQRES 7 A 279 THR ASP GLN TYR ILE TYR MET VAL MET GLU CYS GLY ASN SEQRES 8 A 279 ILE ASP LEU ASN SER TRP LEU LYS LYS LYS LYS SER ILE SEQRES 9 A 279 ASP PRO TRP GLU ARG LYS SER TYR TRP LYS ASN MET LEU SEQRES 10 A 279 GLU ALA VAL HIS THR ILE HIS GLN HIS GLY ILE VAL HIS SEQRES 11 A 279 SER ASP LEU LYS PRO ALA ASN PHE LEU ILE VAL ASP GLY SEQRES 12 A 279 MET LEU LYS LEU ILE ASP PHE GLY ILE ALA ASN GLN MET SEQRES 13 A 279 GLN PRO ASP THR THR SER VAL VAL LYS ASP SER GLN VAL SEQRES 14 A 279 GLY THR VAL ASN TYR MET PRO PRO GLU ALA ILE LYS ASP SEQRES 15 A 279 MET SER SER SER ARG GLU ASN GLY LYS SER LYS SER LYS SEQRES 16 A 279 ILE SER PRO LYS SER ASP VAL TRP SER LEU GLY CYS ILE SEQRES 17 A 279 LEU TYR TYR MET THR TYR GLY LYS THR PRO PHE GLN GLN SEQRES 18 A 279 ILE ILE ASN GLN ILE SER LYS LEU HIS ALA ILE ILE ASP SEQRES 19 A 279 PRO ASN HIS GLU ILE GLU PHE PRO ASP ILE PRO GLU LYS SEQRES 20 A 279 ASP LEU GLN ASP VAL LEU LYS CYS CYS LEU LYS ARG ASP SEQRES 21 A 279 PRO LYS GLN ARG ILE SER ILE PRO GLU LEU LEU ALA HIS SEQRES 22 A 279 PRO TYR VAL GLN ILE GLN HET FMW A 801 33 HET 7PE A 802 7 HETNAM FMW ~{N}8-(2,2-DIMETHYLPROPYL)-~{N}2-[2-ETHOXY-4-(4-METHYL- HETNAM 2 FMW 1,2,4-TRIAZOL-3-YL)PHENYL]-6-METHYL-PYRIDO[3,4- HETNAM 3 FMW D]PYRIMIDINE-2,8-DIAMINE HETNAM 7PE 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY) HETNAM 2 7PE ETHOXY)ETHANOL HETSYN 7PE POLYETHYLENE GLYCOL FRAGMENT FORMUL 2 FMW C24 H30 N8 O FORMUL 3 7PE C14 H30 O7 FORMUL 4 HOH *37(H2 O) HELIX 1 AA1 ASP A 561 LEU A 578 1 18 HELIX 2 AA2 LEU A 609 LYS A 616 1 8 HELIX 3 AA3 ASP A 620 HIS A 641 1 22 HELIX 4 AA4 LYS A 649 ALA A 651 5 3 HELIX 5 AA5 PRO A 691 ASP A 697 1 7 HELIX 6 AA6 PRO A 713 GLY A 730 1 18 HELIX 7 AA7 ASN A 739 ASP A 749 1 11 HELIX 8 AA8 LYS A 762 LEU A 772 1 11 HELIX 9 AA9 SER A 781 LEU A 786 1 6 HELIX 10 AB1 HIS A 788 ILE A 793 1 6 SHEET 1 AA1 6 SER A 517 VAL A 520 0 SHEET 2 AA1 6 ARG A 523 GLY A 534 -1 O TYR A 525 N MET A 518 SHEET 3 AA1 6 SER A 537 LEU A 543 -1 O VAL A 539 N ILE A 531 SHEET 4 AA1 6 ILE A 549 ASN A 556 -1 O TYR A 554 N LYS A 538 SHEET 5 AA1 6 TYR A 597 MET A 602 -1 O MET A 602 N ALA A 551 SHEET 6 AA1 6 LEU A 588 ILE A 593 -1 N TYR A 589 O VAL A 601 SHEET 1 AA2 3 ILE A 607 ASP A 608 0 SHEET 2 AA2 3 PHE A 653 ILE A 655 -1 O ILE A 655 N ILE A 607 SHEET 3 AA2 3 LEU A 660 LEU A 662 -1 O LYS A 661 N LEU A 654 CISPEP 1 LYS A 710 ILE A 711 0 1.33 CISPEP 2 GLU A 761 LYS A 762 0 10.55 SITE 1 AC1 12 GLN A 541 ALA A 551 ILE A 586 GLU A 603 SITE 2 AC1 12 GLY A 605 ASN A 606 ILE A 607 ASP A 608 SITE 3 AC1 12 SER A 611 ALA A 651 LEU A 654 ILE A 663 SITE 1 AC2 7 HIS A 636 HIS A 639 PRO A 713 LYS A 714 SITE 2 AC2 7 SER A 781 ILE A 782 PRO A 783 CRYST1 71.624 107.644 114.683 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013962 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008720 0.00000