HEADER TRANSFERASE 20-JUL-18 6H42 TITLE CRYSTAL STRUCTURE OF THE HUMAN TGT CATALYTIC SUBUNIT QTRT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GUANINE INSERTION ENZYME,TRNA-GUANINE TRANSGLYCOSYLASE; COMPND 5 EC: 2.4.2.29; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: QTRT1, TGT, TGUT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSGLYCOSYLASE, QUEUINE, TRNA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.JOHANNSSON,P.NEUMANN,R.FICNER REVDAT 2 15-MAR-23 6H42 1 COMPND SOURCE JRNL REMARK REVDAT 2 2 1 HET HETNAM HETSYN FORMUL REVDAT 2 3 1 ATOM REVDAT 1 05-SEP-18 6H42 0 JRNL AUTH S.JOHANNSSON,P.NEUMANN,R.FICNER JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN TRNA GUANINE TRANSGLYCOSYLASE JRNL TITL 2 CATALYTIC SUBUNIT QTRT1. JRNL REF BIOMOLECULES V. 8 2018 JRNL REFN ESSN 2218-273X JRNL PMID 30149595 JRNL DOI 10.3390/BIOM8030081 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1644 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2620 - 5.6064 0.99 2644 139 0.1750 0.1894 REMARK 3 2 5.6064 - 4.4510 1.00 2594 137 0.1622 0.1869 REMARK 3 3 4.4510 - 3.8886 1.00 2610 137 0.1642 0.1756 REMARK 3 4 3.8886 - 3.5332 1.00 2610 137 0.2007 0.2555 REMARK 3 5 3.5332 - 3.2800 1.00 2598 137 0.2152 0.2618 REMARK 3 6 3.2800 - 3.0867 1.00 2602 137 0.2360 0.2723 REMARK 3 7 3.0867 - 2.9321 1.00 2584 136 0.2513 0.2784 REMARK 3 8 2.9321 - 2.8045 1.00 2578 136 0.2550 0.3070 REMARK 3 9 2.8045 - 2.6965 1.00 2618 138 0.2596 0.3182 REMARK 3 10 2.6965 - 2.6035 1.00 2583 136 0.2670 0.2707 REMARK 3 11 2.6035 - 2.5221 1.00 2582 136 0.2824 0.3518 REMARK 3 12 2.5221 - 2.4500 1.00 2603 138 0.3086 0.3296 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 11.6145 -22.8634 66.8316 REMARK 3 T TENSOR REMARK 3 T11: 0.3759 T22: 0.5170 REMARK 3 T33: 0.3903 T12: 0.0222 REMARK 3 T13: 0.0065 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 0.0394 L22: 1.7219 REMARK 3 L33: 0.4629 L12: 0.1285 REMARK 3 L13: -0.1006 L23: -0.2362 REMARK 3 S TENSOR REMARK 3 S11: 0.0167 S12: -0.0676 S13: -0.0479 REMARK 3 S21: 0.0004 S22: -0.0206 S23: -0.0131 REMARK 3 S31: 0.0282 S32: 0.3067 S33: 0.0042 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200011008. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64817 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 48.253 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.491 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.52 REMARK 200 R MERGE FOR SHELL (I) : 0.98200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 7.8 200 MM KBR 200 MM REMARK 280 KSCN 3 % (W/V) PGA-LM 5 % PEG 4000, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.85000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 78.91000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.85000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 78.91000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 506 LIES ON A SPECIAL POSITION. REMARK 375 CL CL B 507 LIES ON A SPECIAL POSITION. REMARK 375 BR BR B 508 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 11 REMARK 465 SER B 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 105 NE2 GLN B 110 1.96 REMARK 500 NZ LYS A 303 O ASN B 298 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 25 -68.68 -104.97 REMARK 500 GLN A 51 52.45 -99.15 REMARK 500 SER A 116 -5.24 67.86 REMARK 500 GLN A 202 -160.05 -105.68 REMARK 500 ASP A 221 58.68 -98.04 REMARK 500 CYS A 280 143.03 -174.46 REMARK 500 ARG B 25 -69.28 -106.53 REMARK 500 HIS B 100 -155.90 -102.56 REMARK 500 LEU B 117 72.17 -100.33 REMARK 500 TYR B 131 -61.57 -97.72 REMARK 500 THR B 165 58.83 -92.21 REMARK 500 GLN B 202 -161.57 -106.69 REMARK 500 ASP B 221 51.97 -95.32 REMARK 500 ARG B 368 29.84 -143.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 501 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 75 O REMARK 620 2 LEU A 77 O 83.1 REMARK 620 3 ARG A 80 O 135.9 105.8 REMARK 620 4 GLY A 82 O 85.8 137.8 110.3 REMARK 620 5 GLU A 84 OE2 160.7 87.4 63.0 90.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 317 SG REMARK 620 2 CYS A 319 SG 105.4 REMARK 620 3 CYS A 322 SG 109.6 115.8 REMARK 620 4 HIS A 348 ND1 100.3 118.7 105.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 501 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 75 O REMARK 620 2 LEU B 77 O 88.9 REMARK 620 3 ARG B 80 O 150.3 111.3 REMARK 620 4 GLY B 82 O 81.6 121.0 104.2 REMARK 620 5 GLU B 84 OE1 116.9 69.8 91.1 63.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 317 SG REMARK 620 2 CYS B 319 SG 106.9 REMARK 620 3 CYS B 322 SG 116.2 113.4 REMARK 620 4 HIS B 348 ND1 100.2 116.2 103.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLU B 509 DBREF 6H42 A 11 403 UNP Q9BXR0 TGT_HUMAN 11 403 DBREF 6H42 B 11 403 UNP Q9BXR0 TGT_HUMAN 11 403 SEQRES 1 A 393 GLU SER ALA PRO ARG ILE MET ARG LEU VAL ALA GLU CYS SEQRES 2 A 393 SER ARG SER ARG ALA ARG ALA GLY GLU LEU TRP LEU PRO SEQRES 3 A 393 HIS GLY THR VAL ALA THR PRO VAL PHE MET PRO VAL GLY SEQRES 4 A 393 THR GLN ALA THR MET LYS GLY ILE THR THR GLU GLN LEU SEQRES 5 A 393 ASP ALA LEU GLY CYS ARG ILE CYS LEU GLY ASN THR TYR SEQRES 6 A 393 HIS LEU GLY LEU ARG PRO GLY PRO GLU LEU ILE GLN LYS SEQRES 7 A 393 ALA ASN GLY LEU HIS GLY PHE MET ASN TRP PRO HIS ASN SEQRES 8 A 393 LEU LEU THR ASP SER GLY GLY PHE GLN MET VAL SER LEU SEQRES 9 A 393 VAL SER LEU SER GLU VAL THR GLU GLU GLY VAL ARG PHE SEQRES 10 A 393 ARG SER PRO TYR ASP GLY ASN GLU THR LEU LEU SER PRO SEQRES 11 A 393 GLU LYS SER VAL GLN ILE GLN ASN ALA LEU GLY SER ASP SEQRES 12 A 393 ILE ILE MET GLN LEU ASP ASP VAL VAL SER SER THR VAL SEQRES 13 A 393 THR GLY PRO ARG VAL GLU GLU ALA MET TYR ARG SER ILE SEQRES 14 A 393 ARG TRP LEU ASP ARG CYS ILE ALA ALA HIS GLN ARG PRO SEQRES 15 A 393 ASP LYS GLN ASN LEU PHE ALA ILE ILE GLN GLY GLY LEU SEQRES 16 A 393 ASP ALA ASP LEU ARG ALA THR CYS LEU GLU GLU MET THR SEQRES 17 A 393 LYS ARG ASP VAL PRO GLY PHE ALA ILE GLY GLY LEU SER SEQRES 18 A 393 GLY GLY GLU SER LYS SER GLN PHE TRP ARG MET VAL ALA SEQRES 19 A 393 LEU SER THR SER ARG LEU PRO LYS ASP LYS PRO ARG TYR SEQRES 20 A 393 LEU MET GLY VAL GLY TYR ALA THR ASP LEU VAL VAL CYS SEQRES 21 A 393 VAL ALA LEU GLY CYS ASP MET PHE ASP CYS VAL PHE PRO SEQRES 22 A 393 THR ARG THR ALA ARG PHE GLY SER ALA LEU VAL PRO THR SEQRES 23 A 393 GLY ASN LEU GLN LEU ARG LYS LYS VAL PHE GLU LYS ASP SEQRES 24 A 393 PHE GLY PRO ILE ASP PRO GLU CYS THR CYS PRO THR CYS SEQRES 25 A 393 GLN LYS HIS SER ARG ALA PHE LEU HIS ALA LEU LEU HIS SEQRES 26 A 393 SER ASP ASN THR ALA ALA LEU HIS HIS LEU THR VAL HIS SEQRES 27 A 393 ASN ILE ALA TYR GLN LEU GLN LEU MET SER ALA VAL ARG SEQRES 28 A 393 THR SER ILE VAL GLU LYS ARG PHE PRO ASP PHE VAL ARG SEQRES 29 A 393 ASP PHE MET GLY ALA MET TYR GLY ASP PRO THR LEU CYS SEQRES 30 A 393 PRO THR TRP ALA THR ASP ALA LEU ALA SER VAL GLY ILE SEQRES 31 A 393 THR LEU GLY SEQRES 1 B 393 GLU SER ALA PRO ARG ILE MET ARG LEU VAL ALA GLU CYS SEQRES 2 B 393 SER ARG SER ARG ALA ARG ALA GLY GLU LEU TRP LEU PRO SEQRES 3 B 393 HIS GLY THR VAL ALA THR PRO VAL PHE MET PRO VAL GLY SEQRES 4 B 393 THR GLN ALA THR MET LYS GLY ILE THR THR GLU GLN LEU SEQRES 5 B 393 ASP ALA LEU GLY CYS ARG ILE CYS LEU GLY ASN THR TYR SEQRES 6 B 393 HIS LEU GLY LEU ARG PRO GLY PRO GLU LEU ILE GLN LYS SEQRES 7 B 393 ALA ASN GLY LEU HIS GLY PHE MET ASN TRP PRO HIS ASN SEQRES 8 B 393 LEU LEU THR ASP SER GLY GLY PHE GLN MET VAL SER LEU SEQRES 9 B 393 VAL SER LEU SER GLU VAL THR GLU GLU GLY VAL ARG PHE SEQRES 10 B 393 ARG SER PRO TYR ASP GLY ASN GLU THR LEU LEU SER PRO SEQRES 11 B 393 GLU LYS SER VAL GLN ILE GLN ASN ALA LEU GLY SER ASP SEQRES 12 B 393 ILE ILE MET GLN LEU ASP ASP VAL VAL SER SER THR VAL SEQRES 13 B 393 THR GLY PRO ARG VAL GLU GLU ALA MET TYR ARG SER ILE SEQRES 14 B 393 ARG TRP LEU ASP ARG CYS ILE ALA ALA HIS GLN ARG PRO SEQRES 15 B 393 ASP LYS GLN ASN LEU PHE ALA ILE ILE GLN GLY GLY LEU SEQRES 16 B 393 ASP ALA ASP LEU ARG ALA THR CYS LEU GLU GLU MET THR SEQRES 17 B 393 LYS ARG ASP VAL PRO GLY PHE ALA ILE GLY GLY LEU SER SEQRES 18 B 393 GLY GLY GLU SER LYS SER GLN PHE TRP ARG MET VAL ALA SEQRES 19 B 393 LEU SER THR SER ARG LEU PRO LYS ASP LYS PRO ARG TYR SEQRES 20 B 393 LEU MET GLY VAL GLY TYR ALA THR ASP LEU VAL VAL CYS SEQRES 21 B 393 VAL ALA LEU GLY CYS ASP MET PHE ASP CYS VAL PHE PRO SEQRES 22 B 393 THR ARG THR ALA ARG PHE GLY SER ALA LEU VAL PRO THR SEQRES 23 B 393 GLY ASN LEU GLN LEU ARG LYS LYS VAL PHE GLU LYS ASP SEQRES 24 B 393 PHE GLY PRO ILE ASP PRO GLU CYS THR CYS PRO THR CYS SEQRES 25 B 393 GLN LYS HIS SER ARG ALA PHE LEU HIS ALA LEU LEU HIS SEQRES 26 B 393 SER ASP ASN THR ALA ALA LEU HIS HIS LEU THR VAL HIS SEQRES 27 B 393 ASN ILE ALA TYR GLN LEU GLN LEU MET SER ALA VAL ARG SEQRES 28 B 393 THR SER ILE VAL GLU LYS ARG PHE PRO ASP PHE VAL ARG SEQRES 29 B 393 ASP PHE MET GLY ALA MET TYR GLY ASP PRO THR LEU CYS SEQRES 30 B 393 PRO THR TRP ALA THR ASP ALA LEU ALA SER VAL GLY ILE SEQRES 31 B 393 THR LEU GLY HET K A 501 1 HET ZN A 502 1 HET CL A 503 1 HET CL A 504 1 HET CL A 505 1 HET CL A 506 1 HET CL A 507 1 HET BR A 508 1 HET K B 501 1 HET ZN B 502 1 HET CL B 503 1 HET CL B 504 1 HET CL B 505 1 HET CL B 506 1 HET CL B 507 1 HET BR B 508 1 HET GLU B 509 10 HETNAM K POTASSIUM ION HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM BR BROMIDE ION HETNAM GLU GLUTAMIC ACID FORMUL 3 K 2(K 1+) FORMUL 4 ZN 2(ZN 2+) FORMUL 5 CL 10(CL 1-) FORMUL 10 BR 2(BR 1-) FORMUL 19 GLU C5 H9 N O4 FORMUL 20 HOH *99(H2 O) HELIX 1 AA1 THR A 58 LEU A 65 1 8 HELIX 2 AA2 ASN A 90 ASN A 97 1 8 HELIX 3 AA3 GLY A 107 VAL A 115 1 9 HELIX 4 AA4 SER A 139 GLY A 151 1 13 HELIX 5 AA5 GLY A 168 ALA A 188 1 21 HELIX 6 AA6 ASP A 206 THR A 218 1 13 HELIX 7 AA7 SER A 235 LEU A 250 1 16 HELIX 8 AA8 TYR A 263 LEU A 273 1 11 HELIX 9 AA9 VAL A 281 PHE A 289 1 9 HELIX 10 AB1 LYS A 303 GLU A 307 5 5 HELIX 11 AB2 CYS A 319 HIS A 325 1 7 HELIX 12 AB3 SER A 326 ASP A 337 1 12 HELIX 13 AB4 ASP A 337 GLU A 366 1 30 HELIX 14 AB5 ARG A 368 GLY A 382 1 15 HELIX 15 AB6 ASP A 383 CYS A 387 5 5 HELIX 16 AB7 PRO A 388 VAL A 398 1 11 HELIX 17 AB8 THR B 58 LEU B 65 1 8 HELIX 18 AB9 ASN B 90 ASN B 97 1 8 HELIX 19 AC1 GLY B 107 VAL B 115 1 9 HELIX 20 AC2 SER B 139 GLY B 151 1 13 HELIX 21 AC3 GLY B 168 HIS B 189 1 22 HELIX 22 AC4 ASP B 206 THR B 218 1 13 HELIX 23 AC5 SER B 235 SER B 248 1 14 HELIX 24 AC6 TYR B 263 LEU B 273 1 11 HELIX 25 AC7 VAL B 281 PHE B 289 1 9 HELIX 26 AC8 LYS B 303 GLU B 307 5 5 HELIX 27 AC9 CYS B 319 HIS B 325 1 7 HELIX 28 AD1 SER B 326 ASP B 337 1 12 HELIX 29 AD2 ASP B 337 GLU B 366 1 30 HELIX 30 AD3 ARG B 368 GLY B 382 1 15 HELIX 31 AD4 ASP B 383 CYS B 387 5 5 HELIX 32 AD5 PRO B 388 VAL B 398 1 11 SHEET 1 AA1 3 MET A 17 GLU A 22 0 SHEET 2 AA1 3 ARG A 29 LEU A 35 -1 O ALA A 30 N ALA A 21 SHEET 3 AA1 3 GLY A 38 THR A 42 -1 O VAL A 40 N LEU A 33 SHEET 1 AA2 8 VAL A 44 PHE A 45 0 SHEET 2 AA2 8 MET A 277 ASP A 279 1 O PHE A 278 N VAL A 44 SHEET 3 AA2 8 ARG A 256 MET A 259 1 N LEU A 258 O MET A 277 SHEET 4 AA2 8 GLY A 224 ILE A 227 1 N ILE A 227 O TYR A 257 SHEET 5 AA2 8 ASN A 196 ILE A 201 1 N ILE A 201 O ALA A 226 SHEET 6 AA2 8 ILE A 154 MET A 156 1 N ILE A 155 O ASN A 196 SHEET 7 AA2 8 ASN A 101 THR A 104 1 N THR A 104 O ILE A 154 SHEET 8 AA2 8 ILE A 69 LEU A 71 1 N CYS A 70 O LEU A 103 SHEET 1 AA3 3 GLU A 119 VAL A 120 0 SHEET 2 AA3 3 VAL A 125 ARG A 128 -1 O ARG A 126 N GLU A 119 SHEET 3 AA3 3 GLU A 135 LEU A 138 -1 O LEU A 138 N VAL A 125 SHEET 1 AA4 2 SER A 291 VAL A 294 0 SHEET 2 AA4 2 GLY A 297 GLN A 300 -1 O LEU A 299 N ALA A 292 SHEET 1 AA5 3 MET B 17 GLU B 22 0 SHEET 2 AA5 3 ARG B 29 LEU B 35 -1 O ALA B 30 N VAL B 20 SHEET 3 AA5 3 GLY B 38 THR B 42 -1 O VAL B 40 N LEU B 33 SHEET 1 AA6 8 VAL B 44 PHE B 45 0 SHEET 2 AA6 8 MET B 277 ASP B 279 1 O PHE B 278 N VAL B 44 SHEET 3 AA6 8 ARG B 256 MET B 259 1 N LEU B 258 O MET B 277 SHEET 4 AA6 8 GLY B 224 ILE B 227 1 N ILE B 227 O TYR B 257 SHEET 5 AA6 8 ASN B 196 ILE B 201 1 N ILE B 201 O ALA B 226 SHEET 6 AA6 8 ILE B 154 MET B 156 1 N ILE B 155 O ASN B 196 SHEET 7 AA6 8 ASN B 101 THR B 104 1 N THR B 104 O ILE B 154 SHEET 8 AA6 8 ILE B 69 LEU B 71 1 N CYS B 70 O LEU B 103 SHEET 1 AA7 3 SER B 118 VAL B 120 0 SHEET 2 AA7 3 VAL B 125 ARG B 128 -1 O ARG B 126 N GLU B 119 SHEET 3 AA7 3 GLU B 135 LEU B 138 -1 O LEU B 138 N VAL B 125 SHEET 1 AA8 2 SER B 291 VAL B 294 0 SHEET 2 AA8 2 GLY B 297 GLN B 300 -1 O LEU B 299 N ALA B 292 LINK O TYR A 75 K K A 501 1555 1555 2.50 LINK O LEU A 77 K K A 501 1555 1555 2.50 LINK O ARG A 80 K K A 501 1555 1555 2.45 LINK O GLY A 82 K K A 501 1555 1555 2.63 LINK OE2 GLU A 84 K K A 501 1555 1555 2.99 LINK SG CYS A 317 ZN ZN A 502 1555 1555 2.37 LINK SG CYS A 319 ZN ZN A 502 1555 1555 2.31 LINK SG CYS A 322 ZN ZN A 502 1555 1555 2.32 LINK ND1 HIS A 348 ZN ZN A 502 1555 1555 2.09 LINK O TYR B 75 K K B 501 1555 1555 2.38 LINK O LEU B 77 K K B 501 1555 1555 2.54 LINK O ARG B 80 K K B 501 1555 1555 2.39 LINK O GLY B 82 K K B 501 1555 1555 2.74 LINK OE1 GLU B 84 K K B 501 1555 1555 2.41 LINK SG CYS B 317 ZN ZN B 502 1555 1555 2.40 LINK SG CYS B 319 ZN ZN B 502 1555 1555 2.31 LINK SG CYS B 322 ZN ZN B 502 1555 1555 2.36 LINK ND1 HIS B 348 ZN ZN B 502 1555 1555 2.14 CISPEP 1 THR A 42 PRO A 43 0 1.96 CISPEP 2 THR B 42 PRO B 43 0 2.11 SITE 1 AC1 5 TYR A 75 LEU A 77 ARG A 80 GLY A 82 SITE 2 AC1 5 GLU A 84 SITE 1 AC2 4 CYS A 317 CYS A 319 CYS A 322 HIS A 348 SITE 1 AC3 2 CYS A 23 LYS A 367 SITE 1 AC4 2 VAL A 305 HOH A 620 SITE 1 AC5 2 PHE A 310 SER A 326 SITE 1 AC6 1 CYS A 280 SITE 1 AC7 5 TYR B 75 LEU B 77 ARG B 80 GLY B 82 SITE 2 AC7 5 GLU B 84 SITE 1 AC8 4 CYS B 317 CYS B 319 CYS B 322 HIS B 348 SITE 1 AC9 1 ARG A 327 SITE 1 AD1 4 CYS B 23 LYS B 367 ARG B 368 PHE B 369 SITE 1 AD2 1 CYS B 280 SITE 1 AD3 2 PHE B 310 SER B 326 SITE 1 AD4 1 GLU B 123 SITE 1 AD5 2 ARG B 184 HOH B 601 CRYST1 127.700 157.820 47.770 90.00 108.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007831 0.000000 0.002613 0.00000 SCALE2 0.000000 0.006336 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022069 0.00000