HEADER IMMUNE SYSTEM 26-JUL-18 6H6A TITLE CRYSTAL STRUCTURE OF UNC119 IN COMPLEX WITH LCK PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN UNC-119 HOMOLOG A; COMPND 3 CHAIN: D; COMPND 4 SYNONYM: RETINAL PROTEIN 4,HRG4; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GLY-CYS-GLY-CYS-SER-SER; COMPND 8 CHAIN: E, H, K; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: PROTEIN UNC-119 HOMOLOG A; COMPND 12 CHAIN: G, J; COMPND 13 SYNONYM: RETINAL PROTEIN 4,HRG4; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UNC119, RG4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: UNC119, RG4; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, TRANSPORT, KINASE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.YELLAND,Y.ELMAGHLOOB,M.MCILWRAITH,L.STEPHEN,S.ISMAIL REVDAT 4 27-NOV-19 6H6A 1 REMARK REVDAT 3 16-OCT-19 6H6A 1 REMARK REVDAT 2 10-APR-19 6H6A 1 JRNL REVDAT 1 26-SEP-18 6H6A 0 JRNL AUTH L.A.STEPHEN,Y.ELMAGHLOOB,M.J.MCILWRAITH,T.YELLAND, JRNL AUTH 2 P.CASTRO SANCHEZ,P.RODA-NAVARRO,S.ISMAIL JRNL TITL THE CILIARY MACHINERY IS REPURPOSED FOR T CELL IMMUNE JRNL TITL 2 SYNAPSE TRAFFICKING OF LCK. JRNL REF DEV.CELL V. 47 122 2018 JRNL REFN ISSN 1534-5807 JRNL PMID 30220567 JRNL DOI 10.1016/J.DEVCEL.2018.08.012 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 94.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 39393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2072 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2875 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4206 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.73000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -2.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.165 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.437 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4524 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4188 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6082 ; 0.691 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9668 ; 0.510 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 530 ; 7.496 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 234 ;34.588 ;23.077 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 732 ;13.951 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;18.285 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 625 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5052 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1122 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2105 ; 3.035 ; 2.447 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2103 ; 3.035 ; 2.446 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2634 ; 4.059 ; 3.629 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2635 ; 4.059 ; 3.629 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2419 ; 4.742 ; 2.987 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2419 ; 4.735 ; 2.987 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3447 ; 6.960 ; 4.264 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5005 ; 8.904 ;20.519 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5006 ; 8.906 ;20.523 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 D 59 238 G 59 238 9918 0.11 0.05 REMARK 3 2 D 59 238 J 59 238 9713 0.10 0.05 REMARK 3 3 G 59 238 J 59 238 9787 0.12 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 59 D 238 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8843 -4.6253 5.6530 REMARK 3 T TENSOR REMARK 3 T11: 0.0355 T22: 0.0237 REMARK 3 T33: 0.0596 T12: 0.0021 REMARK 3 T13: 0.0113 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 0.0308 L22: 0.4237 REMARK 3 L33: 0.5089 L12: 0.0338 REMARK 3 L13: -0.0887 L23: -0.0805 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: -0.0170 S13: -0.0241 REMARK 3 S21: 0.0293 S22: -0.0114 S23: 0.0355 REMARK 3 S31: -0.1304 S32: 0.0133 S33: -0.0063 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 59 G 238 REMARK 3 ORIGIN FOR THE GROUP (A): -28.4005 -36.5768 25.5310 REMARK 3 T TENSOR REMARK 3 T11: 0.0403 T22: 0.0116 REMARK 3 T33: 0.0641 T12: -0.0156 REMARK 3 T13: 0.0095 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.1967 L22: 0.2057 REMARK 3 L33: 1.0619 L12: 0.1761 REMARK 3 L13: 0.0320 L23: -0.1620 REMARK 3 S TENSOR REMARK 3 S11: 0.0148 S12: -0.0243 S13: 0.0541 REMARK 3 S21: -0.0252 S22: -0.0136 S23: 0.0244 REMARK 3 S31: 0.1949 S32: -0.0812 S33: -0.0012 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 59 J 238 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4334 -25.4452 -36.8875 REMARK 3 T TENSOR REMARK 3 T11: 0.0676 T22: 0.0114 REMARK 3 T33: 0.0308 T12: 0.0135 REMARK 3 T13: -0.0311 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.2819 L22: 0.2790 REMARK 3 L33: 1.0564 L12: -0.2218 REMARK 3 L13: 0.2092 L23: 0.1247 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: 0.0297 S13: -0.0011 REMARK 3 S21: 0.0281 S22: -0.0038 S23: 0.0196 REMARK 3 S31: 0.1895 S32: 0.0906 S33: -0.0056 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6H6A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200007307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39393 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 94.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350 200MM KH2PO4, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.04500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.08000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.81000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.08000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.04500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.81000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: J, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO D 109 REMARK 465 VAL D 110 REMARK 465 SER D 111 REMARK 465 GLU D 112 REMARK 465 ARG D 113 REMARK 465 LEU D 114 REMARK 465 PRO D 115 REMARK 465 ILE D 116 REMARK 465 ASN D 117 REMARK 465 ARG D 118 REMARK 465 ARG D 119 REMARK 465 ASP D 120 REMARK 465 THR D 239 REMARK 465 PRO D 240 REMARK 465 HIS E 507 REMARK 465 PRO E 508 REMARK 465 GLU E 509 REMARK 465 ASP E 510 REMARK 465 PRO G 109 REMARK 465 VAL G 110 REMARK 465 SER G 111 REMARK 465 GLU G 112 REMARK 465 ARG G 113 REMARK 465 LEU G 114 REMARK 465 PRO G 115 REMARK 465 ILE G 116 REMARK 465 ASN G 117 REMARK 465 ARG G 118 REMARK 465 ARG G 119 REMARK 465 ASP G 120 REMARK 465 LEU G 121 REMARK 465 THR G 239 REMARK 465 PRO G 240 REMARK 465 SER H 505 REMARK 465 SER H 506 REMARK 465 HIS H 507 REMARK 465 PRO H 508 REMARK 465 GLU H 509 REMARK 465 ASP H 510 REMARK 465 PRO J 108 REMARK 465 PRO J 109 REMARK 465 VAL J 110 REMARK 465 SER J 111 REMARK 465 GLU J 112 REMARK 465 ARG J 113 REMARK 465 LEU J 114 REMARK 465 PRO J 115 REMARK 465 ILE J 116 REMARK 465 ASN J 117 REMARK 465 ARG J 118 REMARK 465 ARG J 119 REMARK 465 ASP J 120 REMARK 465 LEU J 121 REMARK 465 ASP J 122 REMARK 465 PRO J 123 REMARK 465 THR J 239 REMARK 465 PRO J 240 REMARK 465 SER K 505 REMARK 465 SER K 506 REMARK 465 HIS K 507 REMARK 465 PRO K 508 REMARK 465 GLU K 509 REMARK 465 ASP K 510 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 121 CG CD CE NZ REMARK 470 ASP D 122 CG OD1 OD2 REMARK 470 GLU J 202 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR D 212 -0.67 76.77 REMARK 500 ALA J 125 -95.77 -55.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 15P D 303 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 15P D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYR E 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL G 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL G 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 G 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL J 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL J 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL J 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 J 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide MYR H 601 and GLY H REMARK 800 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide MYR K 601 and GLY K REMARK 800 501 DBREF 6H6A D 59 240 UNP Q13432 U119A_HUMAN 59 240 DBREF 6H6A E 501 510 PDB 6H6A 6H6A 501 510 DBREF 6H6A G 59 240 UNP Q13432 U119A_HUMAN 59 240 DBREF 6H6A H 501 510 PDB 6H6A 6H6A 501 510 DBREF 6H6A J 59 240 UNP Q13432 U119A_HUMAN 59 240 DBREF 6H6A K 501 510 PDB 6H6A 6H6A 501 510 SEQADV 6H6A LYS D 121 UNP Q13432 LEU 121 CONFLICT SEQRES 1 D 182 PRO ILE GLY PRO GLU ASP VAL LEU GLY LEU GLN ARG ILE SEQRES 2 D 182 THR GLY ASP TYR LEU CYS SER PRO GLU GLU ASN ILE TYR SEQRES 3 D 182 LYS ILE ASP PHE VAL ARG PHE LYS ILE ARG ASP MET ASP SEQRES 4 D 182 SER GLY THR VAL LEU PHE GLU ILE LYS LYS PRO PRO VAL SEQRES 5 D 182 SER GLU ARG LEU PRO ILE ASN ARG ARG ASP LYS ASP PRO SEQRES 6 D 182 ASN ALA GLY ARG PHE VAL ARG TYR GLN PHE THR PRO ALA SEQRES 7 D 182 PHE LEU ARG LEU ARG GLN VAL GLY ALA THR VAL GLU PHE SEQRES 8 D 182 THR VAL GLY ASP LYS PRO VAL ASN ASN PHE ARG MET ILE SEQRES 9 D 182 GLU ARG HIS TYR PHE ARG ASN GLN LEU LEU LYS SER PHE SEQRES 10 D 182 ASP PHE HIS PHE GLY PHE CYS ILE PRO SER SER LYS ASN SEQRES 11 D 182 THR CYS GLU HIS ILE TYR ASP PHE PRO PRO LEU SER GLU SEQRES 12 D 182 GLU LEU ILE SER GLU MET ILE ARG HIS PRO TYR GLU THR SEQRES 13 D 182 GLN SER ASP SER PHE TYR PHE VAL ASP ASP ARG LEU VAL SEQRES 14 D 182 MET HIS ASN LYS ALA ASP TYR SER TYR SER GLY THR PRO SEQRES 1 E 10 GLY CYS GLY CYS SER SER HIS PRO GLU ASP SEQRES 1 G 182 PRO ILE GLY PRO GLU ASP VAL LEU GLY LEU GLN ARG ILE SEQRES 2 G 182 THR GLY ASP TYR LEU CYS SER PRO GLU GLU ASN ILE TYR SEQRES 3 G 182 LYS ILE ASP PHE VAL ARG PHE LYS ILE ARG ASP MET ASP SEQRES 4 G 182 SER GLY THR VAL LEU PHE GLU ILE LYS LYS PRO PRO VAL SEQRES 5 G 182 SER GLU ARG LEU PRO ILE ASN ARG ARG ASP LEU ASP PRO SEQRES 6 G 182 ASN ALA GLY ARG PHE VAL ARG TYR GLN PHE THR PRO ALA SEQRES 7 G 182 PHE LEU ARG LEU ARG GLN VAL GLY ALA THR VAL GLU PHE SEQRES 8 G 182 THR VAL GLY ASP LYS PRO VAL ASN ASN PHE ARG MET ILE SEQRES 9 G 182 GLU ARG HIS TYR PHE ARG ASN GLN LEU LEU LYS SER PHE SEQRES 10 G 182 ASP PHE HIS PHE GLY PHE CYS ILE PRO SER SER LYS ASN SEQRES 11 G 182 THR CYS GLU HIS ILE TYR ASP PHE PRO PRO LEU SER GLU SEQRES 12 G 182 GLU LEU ILE SER GLU MET ILE ARG HIS PRO TYR GLU THR SEQRES 13 G 182 GLN SER ASP SER PHE TYR PHE VAL ASP ASP ARG LEU VAL SEQRES 14 G 182 MET HIS ASN LYS ALA ASP TYR SER TYR SER GLY THR PRO SEQRES 1 H 10 GLY CYS GLY CYS SER SER HIS PRO GLU ASP SEQRES 1 J 182 PRO ILE GLY PRO GLU ASP VAL LEU GLY LEU GLN ARG ILE SEQRES 2 J 182 THR GLY ASP TYR LEU CYS SER PRO GLU GLU ASN ILE TYR SEQRES 3 J 182 LYS ILE ASP PHE VAL ARG PHE LYS ILE ARG ASP MET ASP SEQRES 4 J 182 SER GLY THR VAL LEU PHE GLU ILE LYS LYS PRO PRO VAL SEQRES 5 J 182 SER GLU ARG LEU PRO ILE ASN ARG ARG ASP LEU ASP PRO SEQRES 6 J 182 ASN ALA GLY ARG PHE VAL ARG TYR GLN PHE THR PRO ALA SEQRES 7 J 182 PHE LEU ARG LEU ARG GLN VAL GLY ALA THR VAL GLU PHE SEQRES 8 J 182 THR VAL GLY ASP LYS PRO VAL ASN ASN PHE ARG MET ILE SEQRES 9 J 182 GLU ARG HIS TYR PHE ARG ASN GLN LEU LEU LYS SER PHE SEQRES 10 J 182 ASP PHE HIS PHE GLY PHE CYS ILE PRO SER SER LYS ASN SEQRES 11 J 182 THR CYS GLU HIS ILE TYR ASP PHE PRO PRO LEU SER GLU SEQRES 12 J 182 GLU LEU ILE SER GLU MET ILE ARG HIS PRO TYR GLU THR SEQRES 13 J 182 GLN SER ASP SER PHE TYR PHE VAL ASP ASP ARG LEU VAL SEQRES 14 J 182 MET HIS ASN LYS ALA ASP TYR SER TYR SER GLY THR PRO SEQRES 1 K 10 GLY CYS GLY CYS SER SER HIS PRO GLU ASP HET GOL D 301 6 HET GOL D 302 6 HET 15P D 303 13 HET MYR E 601 15 HET GOL G 301 6 HET GOL G 302 6 HET PO4 G 303 5 HET MYR H 601 15 HET GOL J 301 6 HET GOL J 302 6 HET GOL J 303 6 HET PO4 J 304 5 HET MYR K 601 15 HETNAM GOL GLYCEROL HETNAM 15P POLYETHYLENE GLYCOL (N=34) HETNAM MYR MYRISTIC ACID HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 15P PEG 1500 FORMUL 7 GOL 7(C3 H8 O3) FORMUL 9 15P C69 H140 O35 FORMUL 10 MYR 3(C14 H28 O2) FORMUL 13 PO4 2(O4 P 3-) FORMUL 20 HOH *262(H2 O) HELIX 1 AA1 GLY D 61 VAL D 65 5 5 HELIX 2 AA2 SER D 78 ASN D 82 5 5 HELIX 3 AA3 THR D 134 LEU D 140 5 7 HELIX 4 AA4 SER D 200 HIS D 210 1 11 HELIX 5 AA5 GLY G 61 LEU G 66 1 6 HELIX 6 AA6 SER G 78 ASN G 82 5 5 HELIX 7 AA7 THR G 134 LEU G 140 5 7 HELIX 8 AA8 SER G 200 HIS G 210 1 11 HELIX 9 AA9 GLY J 61 VAL J 65 5 5 HELIX 10 AB1 SER J 78 ASN J 82 5 5 HELIX 11 AB2 THR J 134 LEU J 140 5 7 HELIX 12 AB3 SER J 200 HIS J 210 1 11 SHEET 1 AA1 4 VAL D 101 LYS D 106 0 SHEET 2 AA1 4 ASP D 87 ASP D 95 -1 N PHE D 91 O ILE D 105 SHEET 3 AA1 4 GLN D 142 VAL D 151 -1 O THR D 146 N LYS D 92 SHEET 4 AA1 4 SER D 186 ASP D 195 -1 O HIS D 192 N ALA D 145 SHEET 1 AA2 5 PHE D 128 GLN D 132 0 SHEET 2 AA2 5 ARG D 225 SER D 235 1 O ASP D 233 N TYR D 131 SHEET 3 AA2 5 THR D 214 VAL D 222 -1 N SER D 218 O ASN D 230 SHEET 4 AA2 5 PHE D 159 PHE D 167 -1 N ILE D 162 O PHE D 219 SHEET 5 AA2 5 GLN D 170 HIS D 178 -1 O LEU D 172 N HIS D 165 SHEET 1 AA3 4 VAL G 101 LYS G 106 0 SHEET 2 AA3 4 ASP G 87 ASP G 95 -1 N ILE G 93 O PHE G 103 SHEET 3 AA3 4 GLN G 142 VAL G 151 -1 O THR G 146 N LYS G 92 SHEET 4 AA3 4 SER G 186 ASP G 195 -1 O HIS G 192 N ALA G 145 SHEET 1 AA4 5 PHE G 128 GLN G 132 0 SHEET 2 AA4 5 ARG G 225 SER G 235 1 O ASP G 233 N TYR G 131 SHEET 3 AA4 5 THR G 214 VAL G 222 -1 N SER G 218 O ASN G 230 SHEET 4 AA4 5 VAL G 156 PHE G 167 -1 N ARG G 160 O PHE G 221 SHEET 5 AA4 5 GLN G 170 CYS G 182 -1 O LEU G 172 N HIS G 165 SHEET 1 AA5 4 VAL J 101 LYS J 106 0 SHEET 2 AA5 4 ASP J 87 ASP J 95 -1 N ILE J 93 O LEU J 102 SHEET 3 AA5 4 GLN J 142 VAL J 151 -1 O THR J 146 N LYS J 92 SHEET 4 AA5 4 SER J 186 ASP J 195 -1 O HIS J 192 N ALA J 145 SHEET 1 AA6 5 PHE J 128 GLN J 132 0 SHEET 2 AA6 5 ARG J 225 SER J 235 1 O ASP J 233 N TYR J 131 SHEET 3 AA6 5 THR J 214 VAL J 222 -1 N SER J 218 O ASN J 230 SHEET 4 AA6 5 PHE J 159 PHE J 167 -1 N ARG J 160 O PHE J 221 SHEET 5 AA6 5 GLN J 170 HIS J 178 -1 O LEU J 172 N HIS J 165 LINK N GLY E 501 C1 MYR E 601 1555 1555 1.25 LINK N GLY H 501 C1 MYR H 601 1555 1555 1.28 LINK N GLY K 501 C1 MYR K 601 1555 1555 1.27 SITE 1 AC1 7 ILE D 86 ASP D 87 PHE D 88 GLY D 126 SITE 2 AC1 7 ASN D 230 HOH D 460 HOH D 479 SITE 1 AC2 5 THR D 100 LYS D 173 SER D 174 PHE D 175 SITE 2 AC2 5 ASP D 176 SITE 1 AC3 7 LYS D 92 LEU D 172 PRO D 198 LEU D 199 SITE 2 AC3 7 SER D 200 LEU D 203 HOH D 411 SITE 1 AC4 10 ILE D 93 VAL D 129 TYR D 131 GLU D 163 SITE 2 AC4 10 HIS D 165 PRO D 197 TYR D 234 GLY E 501 SITE 3 AC4 10 CYS E 502 GLY E 503 SITE 1 AC5 6 LYS G 173 PHE G 175 ASP G 176 PHE G 177 SITE 2 AC5 6 HOH G 408 HOH G 468 SITE 1 AC6 6 ILE G 86 ASP G 87 PHE G 88 GLY G 126 SITE 2 AC6 6 ASN G 230 HOH G 442 SITE 1 AC7 7 ASN D 158 ARG D 160 HIS D 178 HOH D 402 SITE 2 AC7 7 HIS G 210 PRO G 211 GLU G 213 SITE 1 AC8 7 ILE J 86 ASP J 87 PHE J 88 GLY J 126 SITE 2 AC8 7 MET J 228 ASN J 230 HOH J 431 SITE 1 AC9 6 HOH G 422 HOH G 431 LEU J 172 PRO J 198 SITE 2 AC9 6 LEU J 203 HOH J 406 SITE 1 AD1 2 THR J 134 GLY J 238 SITE 1 AD2 7 HIS D 210 PRO D 211 GLU D 213 ASN J 158 SITE 2 AD2 7 ARG J 160 HIS J 178 HOH J 407 SITE 1 AD3 13 ILE G 93 VAL G 129 TYR G 131 GLU G 163 SITE 2 AD3 13 TYR G 194 PRO G 197 SER G 218 TYR G 220 SITE 3 AD3 13 ASN G 230 TYR G 234 CYS H 502 GLY H 503 SITE 4 AD3 13 CYS H 504 SITE 1 AD4 12 VAL J 129 TYR J 131 GLU J 163 HIS J 165 SITE 2 AD4 12 TYR J 194 SER J 218 TYR J 220 ASN J 230 SITE 3 AD4 12 TYR J 234 CYS K 502 GLY K 503 CYS K 504 CRYST1 50.090 63.620 188.160 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019964 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005315 0.00000