HEADER CHAPERONE 31-JUL-18 6H7X TITLE FIRST X-RAY STRUCTURE OF FULL-LENGTH HUMAN RUVB-LIKE 2. COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUVB-LIKE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 48 KDA TATA BOX-BINDING PROTEIN-INTERACTING PROTEIN,48 KDA COMPND 5 TBP-INTERACTING PROTEIN,51 KDA ERYTHROCYTE CYTOSOLIC PROTEIN,ECP-51, COMPND 6 INO80 COMPLEX SUBUNIT J,REPRESSING PONTIN 52,REPTIN 52,TIP49B,TIP60- COMPND 7 ASSOCIATED PROTEIN 54-BETA,TAP54-BETA; COMPND 8 EC: 3.6.4.12; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RUVBL2, INO80J, TIP48, TIP49B, CGI-46; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATPASE, HELICASE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR S.SILVA,J.A.BRITO,P.MATIAS,T.BANDEIRAS REVDAT 4 17-JAN-24 6H7X 1 AUTHOR REMARK REVDAT 3 26-SEP-18 6H7X 1 JRNL REVDAT 2 19-SEP-18 6H7X 1 JRNL REVDAT 1 08-AUG-18 6H7X 0 SPRSDE 08-AUG-18 6H7X 5N7R JRNL AUTH S.T.N.SILVA,J.A.BRITO,R.ARRANZ,C.O.S.SORZANO,C.EBEL, JRNL AUTH 2 J.DOUTCH,M.D.TULLY,J.M.CARAZO,J.L.CARRASCOSA,P.M.MATIAS, JRNL AUTH 3 T.M.BANDEIRAS JRNL TITL X-RAY STRUCTURE OF FULL-LENGTH HUMAN RUVB-LIKE 2 - JRNL TITL 2 MECHANISTIC INSIGHTS INTO COUPLING BETWEEN ATP BINDING AND JRNL TITL 3 MECHANICAL ACTION. JRNL REF SCI REP V. 8 13726 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 30213962 JRNL DOI 10.1038/S41598-018-31997-Z REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2992: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 11578 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.2726 - 4.5884 0.95 2784 124 0.2022 0.2366 REMARK 3 2 4.5884 - 3.6427 0.97 2772 121 0.1806 0.2022 REMARK 3 3 3.6427 - 3.1825 0.97 2727 150 0.2088 0.2380 REMARK 3 4 3.1825 - 2.8916 0.98 2761 139 0.2675 0.3118 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2940 REMARK 3 ANGLE : 0.424 3936 REMARK 3 CHIRALITY : 0.041 467 REMARK 3 PLANARITY : 0.002 498 REMARK 3 DIHEDRAL : 11.824 1812 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.2562 105.8235 -21.7917 REMARK 3 T TENSOR REMARK 3 T11: 0.2901 T22: 0.4106 REMARK 3 T33: 0.3592 T12: 0.0479 REMARK 3 T13: -0.0618 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.6825 L22: 1.2240 REMARK 3 L33: 1.6199 L12: 0.5753 REMARK 3 L13: 0.1363 L23: -0.0912 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.4852 S13: 0.0538 REMARK 3 S21: 0.1150 S22: 0.0555 S23: -0.2107 REMARK 3 S31: 0.1275 S32: 0.3592 S33: -0.0322 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 119.5106 92.9237 4.3736 REMARK 3 T TENSOR REMARK 3 T11: 0.5155 T22: 0.7901 REMARK 3 T33: 0.6392 T12: -0.0000 REMARK 3 T13: -0.1787 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 4.2540 L22: 0.6657 REMARK 3 L33: 2.0897 L12: -2.1508 REMARK 3 L13: 3.3130 L23: -1.5171 REMARK 3 S TENSOR REMARK 3 S11: 0.4841 S12: 0.7137 S13: -0.5941 REMARK 3 S21: -0.1445 S22: -0.2690 S23: 0.1023 REMARK 3 S31: 0.0172 S32: 0.4728 S33: -0.2101 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 252 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.8781 108.6250 -18.1982 REMARK 3 T TENSOR REMARK 3 T11: 0.2863 T22: 0.3005 REMARK 3 T33: 0.2495 T12: -0.0011 REMARK 3 T13: 0.0036 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 2.6972 L22: 1.8630 REMARK 3 L33: 3.9361 L12: -0.2608 REMARK 3 L13: 1.5000 L23: -0.5559 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.2826 S13: -0.0167 REMARK 3 S21: 0.0863 S22: 0.0634 S23: -0.0994 REMARK 3 S31: 0.2108 S32: -0.0833 S33: -0.0703 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 348 THROUGH 456 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.9139 84.3749 -41.1898 REMARK 3 T TENSOR REMARK 3 T11: 0.3338 T22: 0.4162 REMARK 3 T33: 0.3551 T12: 0.0494 REMARK 3 T13: 0.0543 T23: -0.0706 REMARK 3 L TENSOR REMARK 3 L11: 0.7102 L22: 4.1123 REMARK 3 L33: 0.5970 L12: 1.5040 REMARK 3 L13: 0.2978 L23: 0.1838 REMARK 3 S TENSOR REMARK 3 S11: -0.1205 S12: 0.2753 S13: -0.1853 REMARK 3 S21: -0.1465 S22: 0.2419 S23: -0.6697 REMARK 3 S31: 0.1128 S32: 0.1557 S33: -0.0920 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H7X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200011147. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 273.15 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97620 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11583 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.892 REMARK 200 RESOLUTION RANGE LOW (A) : 52.859 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2C9O REMARK 200 REMARK 200 REMARK: HEXAGONAL NEEDLE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MAGNESIUM CHLORIDE, PH 6, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 303.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 40950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 106600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -174.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 184.53450 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 106.54104 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 213.08209 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 123.02300 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 213.08209 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 -61.51150 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 106.54104 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 123.02300 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 VAL A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 LYS A 9 REMARK 465 VAL A 10 REMARK 465 PRO A 11 REMARK 465 GLU A 12 REMARK 465 ILE A 13 REMARK 465 ARG A 14 REMARK 465 ASP A 15 REMARK 465 VAL A 16 REMARK 465 THR A 17 REMARK 465 ARG A 18 REMARK 465 ILE A 19 REMARK 465 GLU A 20 REMARK 465 ARG A 21 REMARK 465 ILE A 22 REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 HIS A 25 REMARK 465 SER A 26 REMARK 465 HIS A 27 REMARK 465 ILE A 28 REMARK 465 ARG A 29 REMARK 465 GLY A 30 REMARK 465 LEU A 31 REMARK 465 GLY A 32 REMARK 465 LEU A 33 REMARK 465 ASP A 34 REMARK 465 ASP A 35 REMARK 465 ALA A 36 REMARK 465 LEU A 37 REMARK 465 GLU A 38 REMARK 465 PRO A 39 REMARK 465 ARG A 40 REMARK 465 GLN A 41 REMARK 465 ALA A 42 REMARK 465 ASP A 148 REMARK 465 ARG A 149 REMARK 465 PRO A 150 REMARK 465 ALA A 151 REMARK 465 THR A 152 REMARK 465 GLY A 153 REMARK 465 THR A 154 REMARK 465 GLY A 155 REMARK 465 SER A 156 REMARK 465 LYS A 157 REMARK 465 VAL A 158 REMARK 465 GLY A 159 REMARK 465 ASP A 185 REMARK 465 LYS A 186 REMARK 465 VAL A 187 REMARK 465 SER A 203 REMARK 465 LYS A 204 REMARK 465 LEU A 205 REMARK 465 GLY A 206 REMARK 465 ARG A 207 REMARK 465 SER A 208 REMARK 465 PHE A 209 REMARK 465 THR A 210 REMARK 465 ARG A 211 REMARK 465 ALA A 212 REMARK 465 ARG A 213 REMARK 465 ASP A 214 REMARK 465 TYR A 215 REMARK 465 ASP A 216 REMARK 465 ALA A 217 REMARK 465 MET A 218 REMARK 465 GLY A 219 REMARK 465 SER A 220 REMARK 465 GLN A 221 REMARK 465 THR A 222 REMARK 465 LYS A 223 REMARK 465 PHE A 224 REMARK 465 VAL A 225 REMARK 465 GLN A 226 REMARK 465 CYS A 227 REMARK 465 ARG A 253 REMARK 465 THR A 254 REMARK 465 GLN A 255 REMARK 465 GLY A 457 REMARK 465 GLU A 458 REMARK 465 THR A 459 REMARK 465 MET A 460 REMARK 465 ASP A 461 REMARK 465 THR A 462 REMARK 465 SER A 463 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 67 30.13 -88.87 REMARK 500 ASP A 196 19.84 58.13 REMARK 500 LYS A 197 -138.67 -139.92 REMARK 500 ALA A 198 -158.20 -141.81 REMARK 500 PHE A 261 31.39 -96.71 REMARK 500 THR A 328 149.16 -170.22 REMARK 500 THR A 397 -86.79 -119.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1011 DBREF 6H7X A 1 463 UNP Q9Y230 RUVB2_HUMAN 1 463 SEQRES 1 A 463 MET ALA THR VAL THR ALA THR THR LYS VAL PRO GLU ILE SEQRES 2 A 463 ARG ASP VAL THR ARG ILE GLU ARG ILE GLY ALA HIS SER SEQRES 3 A 463 HIS ILE ARG GLY LEU GLY LEU ASP ASP ALA LEU GLU PRO SEQRES 4 A 463 ARG GLN ALA SER GLN GLY MET VAL GLY GLN LEU ALA ALA SEQRES 5 A 463 ARG ARG ALA ALA GLY VAL VAL LEU GLU MET ILE ARG GLU SEQRES 6 A 463 GLY LYS ILE ALA GLY ARG ALA VAL LEU ILE ALA GLY GLN SEQRES 7 A 463 PRO GLY THR GLY LYS THR ALA ILE ALA MET GLY MET ALA SEQRES 8 A 463 GLN ALA LEU GLY PRO ASP THR PRO PHE THR ALA ILE ALA SEQRES 9 A 463 GLY SER GLU ILE PHE SER LEU GLU MET SER LYS THR GLU SEQRES 10 A 463 ALA LEU THR GLN ALA PHE ARG ARG SER ILE GLY VAL ARG SEQRES 11 A 463 ILE LYS GLU GLU THR GLU ILE ILE GLU GLY GLU VAL VAL SEQRES 12 A 463 GLU ILE GLN ILE ASP ARG PRO ALA THR GLY THR GLY SER SEQRES 13 A 463 LYS VAL GLY LYS LEU THR LEU LYS THR THR GLU MET GLU SEQRES 14 A 463 THR ILE TYR ASP LEU GLY THR LYS MET ILE GLU SER LEU SEQRES 15 A 463 THR LYS ASP LYS VAL GLN ALA GLY ASP VAL ILE THR ILE SEQRES 16 A 463 ASP LYS ALA THR GLY LYS ILE SER LYS LEU GLY ARG SER SEQRES 17 A 463 PHE THR ARG ALA ARG ASP TYR ASP ALA MET GLY SER GLN SEQRES 18 A 463 THR LYS PHE VAL GLN CYS PRO ASP GLY GLU LEU GLN LYS SEQRES 19 A 463 ARG LYS GLU VAL VAL HIS THR VAL SER LEU HIS GLU ILE SEQRES 20 A 463 ASP VAL ILE ASN SER ARG THR GLN GLY PHE LEU ALA LEU SEQRES 21 A 463 PHE SER GLY ASP THR GLY GLU ILE LYS SER GLU VAL ARG SEQRES 22 A 463 GLU GLN ILE ASN ALA LYS VAL ALA GLU TRP ARG GLU GLU SEQRES 23 A 463 GLY LYS ALA GLU ILE ILE PRO GLY VAL LEU PHE ILE ASP SEQRES 24 A 463 GLU VAL HIS MET LEU ASP ILE GLU SER PHE SER PHE LEU SEQRES 25 A 463 ASN ARG ALA LEU GLU SER ASP MET ALA PRO VAL LEU ILE SEQRES 26 A 463 MET ALA THR ASN ARG GLY ILE THR ARG ILE ARG GLY THR SEQRES 27 A 463 SER TYR GLN SER PRO HIS GLY ILE PRO ILE ASP LEU LEU SEQRES 28 A 463 ASP ARG LEU LEU ILE VAL SER THR THR PRO TYR SER GLU SEQRES 29 A 463 LYS ASP THR LYS GLN ILE LEU ARG ILE ARG CYS GLU GLU SEQRES 30 A 463 GLU ASP VAL GLU MET SER GLU ASP ALA TYR THR VAL LEU SEQRES 31 A 463 THR ARG ILE GLY LEU GLU THR SER LEU ARG TYR ALA ILE SEQRES 32 A 463 GLN LEU ILE THR ALA ALA SER LEU VAL CYS ARG LYS ARG SEQRES 33 A 463 LYS GLY THR GLU VAL GLN VAL ASP ASP ILE LYS ARG VAL SEQRES 34 A 463 TYR SER LEU PHE LEU ASP GLU SER ARG SER THR GLN TYR SEQRES 35 A 463 MET LYS GLU TYR GLN ASP ALA PHE LEU PHE ASN GLU LEU SEQRES 36 A 463 LYS GLY GLU THR MET ASP THR SER HET MG A1001 1 HET MG A1002 1 HET MG A1003 1 HET EDO A1004 4 HET PEG A1005 7 HET EDO A1006 4 HET EDO A1007 4 HET EDO A1008 4 HET EDO A1009 4 HET EDO A1010 4 HET EDO A1011 4 HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG 3(MG 2+) FORMUL 5 EDO 7(C2 H6 O2) FORMUL 6 PEG C4 H10 O3 FORMUL 13 HOH *40(H2 O) HELIX 1 AA1 GLN A 49 GLY A 66 1 18 HELIX 2 AA2 GLY A 82 GLY A 95 1 14 HELIX 3 AA3 SER A 106 PHE A 109 5 4 HELIX 4 AA4 SER A 114 SER A 126 1 13 HELIX 5 AA5 GLY A 175 LYS A 184 1 10 HELIX 6 AA6 LEU A 244 SER A 252 1 9 HELIX 7 AA7 LEU A 258 GLY A 263 5 6 HELIX 8 AA8 LYS A 269 GLU A 286 1 18 HELIX 9 AA9 GLU A 300 LEU A 304 5 5 HELIX 10 AB1 ASP A 305 LEU A 316 1 12 HELIX 11 AB2 PRO A 347 ASP A 352 1 6 HELIX 12 AB3 SER A 363 ASP A 379 1 17 HELIX 13 AB4 SER A 383 THR A 397 1 15 HELIX 14 AB5 SER A 398 ARG A 416 1 19 HELIX 15 AB6 GLN A 422 PHE A 433 1 12 HELIX 16 AB7 ASP A 435 THR A 440 1 6 HELIX 17 AB8 MET A 443 LEU A 455 1 13 SHEET 1 AA1 5 PHE A 100 ALA A 104 0 SHEET 2 AA1 5 VAL A 295 ASP A 299 1 O PHE A 297 N THR A 101 SHEET 3 AA1 5 VAL A 323 THR A 328 1 O ILE A 325 N ILE A 298 SHEET 4 AA1 5 ALA A 72 GLY A 77 1 N VAL A 73 O MET A 326 SHEET 5 AA1 5 LEU A 354 THR A 359 1 O VAL A 357 N ALA A 76 SHEET 1 AA2 4 GLU A 169 TYR A 172 0 SHEET 2 AA2 4 LEU A 161 LYS A 164 -1 N LEU A 161 O TYR A 172 SHEET 3 AA2 4 ILE A 127 ILE A 145 -1 N GLU A 141 O LYS A 164 SHEET 4 AA2 4 GLN A 233 SER A 243 -1 O HIS A 240 N ILE A 131 SHEET 1 AA3 3 ASP A 191 THR A 194 0 SHEET 2 AA3 3 ILE A 127 ILE A 145 -1 N ILE A 138 O ILE A 193 SHEET 3 AA3 3 ALA A 289 PRO A 293 -1 O GLU A 290 N ARG A 130 SHEET 1 AA4 2 ILE A 332 ARG A 334 0 SHEET 2 AA4 2 GLN A 341 PRO A 343 -1 O SER A 342 N THR A 333 SITE 1 AC1 3 ASP A 305 ARG A 336 PEG A1005 SITE 1 AC2 2 SER A 398 GLU A 436 SITE 1 AC3 1 ASP A 366 SITE 1 AC4 4 VAL A 357 SER A 358 SER A 431 LEU A 432 SITE 1 AC5 5 ASP A 305 ILE A 306 GLU A 307 GLY A 337 SITE 2 AC5 5 MG A1001 SITE 1 AC6 5 LYS A 83 ASP A 299 GLU A 300 THR A 328 SITE 2 AC6 5 ASN A 329 SITE 1 AC7 4 THR A 440 GLN A 441 TYR A 442 MET A 443 SITE 1 AC8 2 GLN A 92 EDO A1009 SITE 1 AC9 1 EDO A1008 SITE 1 AD1 5 GLY A 80 THR A 81 GLY A 82 LYS A 83 SITE 2 AD1 5 THR A 84 SITE 1 AD2 2 GLU A 381 ARG A 414 CRYST1 123.023 123.023 60.880 90.00 90.00 120.00 P 6 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008129 0.004693 0.000000 0.00000 SCALE2 0.000000 0.009386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016426 0.00000