HEADER OXIDOREDUCTASE 08-AUG-18 6HAQ TITLE AFGH61B WILD-TYPE COPPER LOADED COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOSARTORYA FUMIGATA; SOURCE 3 ORGANISM_COMMON: ASPERGILLUS FUMIGATUS; SOURCE 4 ORGANISM_TAXID: 330879; SOURCE 5 STRAIN: ATCC MYA-4609 / AF293 / CBS 101355 / FGSC A1100; SOURCE 6 GENE: AFUA_4G07850; SOURCE 7 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 5062 KEYWDS LYTIC POLYSACCHARIDE MONOOXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.LO LEGGIO,J.C.N.POULSEN,C.D.WEIHE REVDAT 4 17-JAN-24 6HAQ 1 HETSYN REVDAT 3 29-JUL-20 6HAQ 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 17-OCT-18 6HAQ 1 JRNL REVDAT 1 22-AUG-18 6HAQ 0 JRNL AUTH L.LO LEGGIO,C.D.WEIHE,J.N.POULSEN,M.SWEENEY,F.RASMUSSEN, JRNL AUTH 2 J.LIN,L.DE MARIA,M.WOGULIS JRNL TITL STRUCTURE OF A LYTIC POLYSACCHARIDE MONOOXYGENASE FROM JRNL TITL 2 ASPERGILLUS FUMIGATUS AND AN ENGINEERED THERMOSTABLE JRNL TITL 3 VARIANT. JRNL REF CARBOHYDR. RES. V. 469 55 2018 JRNL REFN ISSN 1873-426X JRNL PMID 30296642 JRNL DOI 10.1016/J.CARRES.2018.08.009 REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.4 REMARK 3 NUMBER OF REFLECTIONS : 71213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.107 REMARK 3 R VALUE (WORKING SET) : 0.105 REMARK 3 FREE R VALUE : 0.156 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3737 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.37 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2672 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 42.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 128 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 843 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -1.33000 REMARK 3 B12 (A**2) : -1.15000 REMARK 3 B13 (A**2) : 1.43000 REMARK 3 B23 (A**2) : -1.75000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.058 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.057 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.509 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.985 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3695 ; 0.029 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 3170 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5098 ; 1.992 ; 1.668 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7456 ; 1.079 ; 1.652 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 499 ; 6.824 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 164 ;39.391 ;24.756 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 515 ;12.051 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;14.377 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 505 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4316 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 709 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1891 ; 2.023 ; 1.550 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1889 ; 1.981 ; 1.548 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2377 ; 2.418 ; 2.343 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6865 ; 4.728 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 506 ;32.902 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7083 ;17.367 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6HAQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011365. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.350 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82114 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 31.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28700 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6H1Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SAMPLE PREINCUBATED WITH 2 MM REMARK 280 COPPER(II) ACETATE. RESERVOIR CONSISTING OF 20 MM MGCL2, 0.1 M REMARK 280 HEPES PH 7.5, 22% POLYACRYLIC ACID 5100 SODIUM SALT., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 229 REMARK 465 ALA B 229 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 422 O HOH B 590 1.94 REMARK 500 O HOH B 656 O HOH B 776 1.99 REMARK 500 O HOH A 493 O HOH A 564 2.10 REMARK 500 O HOH B 408 O HOH B 411 2.14 REMARK 500 O HOH B 458 O HOH B 665 2.15 REMARK 500 OD1 ASN A 228 O HOH A 401 2.15 REMARK 500 O HOH B 408 O HOH B 554 2.16 REMARK 500 O HOH B 530 O HOH B 649 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN B 27 O HOH B 529 1655 1.69 REMARK 500 OE1 GLN B 21 O HOH A 829 1546 1.87 REMARK 500 O HOH A 632 O HOH B 713 1654 2.11 REMARK 500 OE1 GLN A 117 O HOH B 804 1655 2.11 REMARK 500 O HOH A 670 O HOH B 532 1654 2.15 REMARK 500 NZ LYS B 201 O HOH A 620 1455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 50 CD GLN A 50 OE1 0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 58 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 58 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 21 -55.78 -137.24 REMARK 500 HIS A 57 -178.55 87.95 REMARK 500 HIS A 57 176.59 87.95 REMARK 500 HIS A 86 59.03 -90.48 REMARK 500 ASN A 137 53.09 -94.46 REMARK 500 ASP A 214 128.42 -38.44 REMARK 500 GLN B 21 -57.09 -137.21 REMARK 500 GLN B 21 -58.97 -136.32 REMARK 500 HIS B 57 174.25 86.31 REMARK 500 HIS B 57 175.12 86.31 REMARK 500 ASN B 137 51.06 -99.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 819 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 820 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH A 821 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 822 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A 823 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A 824 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A 825 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH A 826 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A 827 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH A 828 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A 829 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH A 830 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH A 831 DISTANCE = 7.87 ANGSTROMS REMARK 525 HOH B 804 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 805 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 806 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH B 807 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B 808 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B 809 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B 810 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH B 811 DISTANCE = 7.03 ANGSTROMS REMARK 525 HOH B 812 DISTANCE = 7.83 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIC A 1 N REMARK 620 2 HIC A 1 ND1 97.3 REMARK 620 3 HIS A 86 NE2 94.0 168.6 REMARK 620 4 HOH A 484 O 169.9 84.8 84.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIC B 1 N REMARK 620 2 HIC B 1 ND1 92.3 REMARK 620 3 HIS B 86 NE2 94.8 172.6 REMARK 620 4 HOH B 430 O 165.2 88.3 85.4 REMARK 620 5 HOH B 656 O 93.2 84.0 93.5 101.5 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6H1Z RELATED DB: PDB REMARK 900 NATIVE, NOT COPPER LOADED REMARK 900 RELATED ID: 6HA5 RELATED DB: PDB REMARK 900 VARIANT DBREF 6HAQ A 1 229 UNP Q4WP32 Q4WP32_ASPFU 22 250 DBREF 6HAQ B 1 229 UNP Q4WP32 Q4WP32_ASPFU 22 250 SEQRES 1 A 229 HIC GLY PHE VAL SER GLY ILE VAL ALA ASP GLY LYS TYR SEQRES 2 A 229 TYR GLY GLY TYR LEU VAL ASN GLN TYR PRO TYR MET SER SEQRES 3 A 229 ASN PRO PRO ASP THR ILE ALA TRP SER THR THR ALA THR SEQRES 4 A 229 ASP LEU GLY PHE VAL ASP GLY THR GLY TYR GLN SER PRO SEQRES 5 A 229 ASP ILE ILE CYS HIS ARG ASP ALA LYS ASN GLY LYS LEU SEQRES 6 A 229 THR ALA THR VAL ALA ALA GLY SER GLN ILE GLU PHE GLN SEQRES 7 A 229 TRP THR THR TRP PRO GLU SER HIS HIS GLY PRO LEU ILE SEQRES 8 A 229 THR TYR LEU ALA PRO CYS ASN GLY ASP CYS ALA THR VAL SEQRES 9 A 229 ASP LYS THR THR LEU LYS PHE VAL LYS ILE ALA ALA GLN SEQRES 10 A 229 GLY LEU ILE ASP GLY SER ASN PRO PRO GLY VAL TRP ALA SEQRES 11 A 229 ASP ASP GLU MET ILE ALA ASN ASN ASN THR ALA THR VAL SEQRES 12 A 229 THR ILE PRO ALA SER TYR ALA PRO GLY ASN TYR VAL LEU SEQRES 13 A 229 ARG HIS GLU ILE ILE ALA LEU HIS SER ALA GLY ASN LEU SEQRES 14 A 229 ASN GLY ALA GLN ASN TYR PRO GLN CYS PHE ASN ILE GLN SEQRES 15 A 229 ILE THR GLY GLY GLY SER ALA GLN GLY SER GLY THR ALA SEQRES 16 A 229 GLY THR SER LEU TYR LYS ASN THR ASP PRO GLY ILE LYS SEQRES 17 A 229 PHE ASP ILE TYR SER ASP LEU SER GLY GLY TYR PRO ILE SEQRES 18 A 229 PRO GLY PRO ALA LEU PHE ASN ALA SEQRES 1 B 229 HIC GLY PHE VAL SER GLY ILE VAL ALA ASP GLY LYS TYR SEQRES 2 B 229 TYR GLY GLY TYR LEU VAL ASN GLN TYR PRO TYR MET SER SEQRES 3 B 229 ASN PRO PRO ASP THR ILE ALA TRP SER THR THR ALA THR SEQRES 4 B 229 ASP LEU GLY PHE VAL ASP GLY THR GLY TYR GLN SER PRO SEQRES 5 B 229 ASP ILE ILE CYS HIS ARG ASP ALA LYS ASN GLY LYS LEU SEQRES 6 B 229 THR ALA THR VAL ALA ALA GLY SER GLN ILE GLU PHE GLN SEQRES 7 B 229 TRP THR THR TRP PRO GLU SER HIS HIS GLY PRO LEU ILE SEQRES 8 B 229 THR TYR LEU ALA PRO CYS ASN GLY ASP CYS ALA THR VAL SEQRES 9 B 229 ASP LYS THR THR LEU LYS PHE VAL LYS ILE ALA ALA GLN SEQRES 10 B 229 GLY LEU ILE ASP GLY SER ASN PRO PRO GLY VAL TRP ALA SEQRES 11 B 229 ASP ASP GLU MET ILE ALA ASN ASN ASN THR ALA THR VAL SEQRES 12 B 229 THR ILE PRO ALA SER TYR ALA PRO GLY ASN TYR VAL LEU SEQRES 13 B 229 ARG HIS GLU ILE ILE ALA LEU HIS SER ALA GLY ASN LEU SEQRES 14 B 229 ASN GLY ALA GLN ASN TYR PRO GLN CYS PHE ASN ILE GLN SEQRES 15 B 229 ILE THR GLY GLY GLY SER ALA GLN GLY SER GLY THR ALA SEQRES 16 B 229 GLY THR SER LEU TYR LYS ASN THR ASP PRO GLY ILE LYS SEQRES 17 B 229 PHE ASP ILE TYR SER ASP LEU SER GLY GLY TYR PRO ILE SEQRES 18 B 229 PRO GLY PRO ALA LEU PHE ASN ALA MODRES 6HAQ HIC A 1 HIS MODIFIED RESIDUE MODRES 6HAQ HIC B 1 HIS MODIFIED RESIDUE HET HIC A 1 11 HET HIC B 1 11 HET CU A 301 1 HET NAG A 302 14 HET CU B 301 1 HET ACT B 302 4 HETNAM HIC 4-METHYL-HISTIDINE HETNAM CU COPPER (II) ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ACT ACETATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 HIC 2(C7 H11 N3 O2) FORMUL 3 CU 2(CU 2+) FORMUL 4 NAG C8 H15 N O6 FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 HOH *843(H2 O) HELIX 1 AA1 GLN A 21 MET A 25 5 5 HELIX 2 AA2 ASP A 45 TYR A 49 5 5 HELIX 3 AA3 PRO A 52 HIS A 57 1 6 HELIX 4 AA4 ASP A 105 THR A 108 5 4 HELIX 5 AA5 ALA A 130 ASN A 137 1 8 HELIX 6 AA6 THR A 197 LEU A 199 5 3 HELIX 7 AA7 GLN B 21 MET B 25 5 5 HELIX 8 AA8 ASP B 45 TYR B 49 5 5 HELIX 9 AA9 PRO B 52 HIS B 57 1 6 HELIX 10 AB1 ASP B 105 THR B 108 5 4 HELIX 11 AB2 ALA B 130 ASN B 137 1 8 HELIX 12 AB3 THR B 197 LEU B 199 5 3 SHEET 1 AA1 4 LYS A 12 GLY A 15 0 SHEET 2 AA1 4 VAL A 4 ALA A 9 -1 N ILE A 7 O TYR A 14 SHEET 3 AA1 4 GLN A 74 TRP A 79 -1 O GLN A 78 N GLY A 6 SHEET 4 AA1 4 THR A 140 THR A 144 -1 O VAL A 143 N ILE A 75 SHEET 1 AA2 6 ALA A 67 ALA A 70 0 SHEET 2 AA2 6 GLN A 173 THR A 184 1 O GLN A 182 N VAL A 69 SHEET 3 AA2 6 GLY A 152 ALA A 162 -1 N LEU A 156 O PHE A 179 SHEET 4 AA2 6 LEU A 90 PRO A 96 -1 N ILE A 91 O GLU A 159 SHEET 5 AA2 6 LYS A 110 GLN A 117 -1 O ILE A 114 N THR A 92 SHEET 6 AA2 6 THR A 194 ALA A 195 -1 O THR A 194 N PHE A 111 SHEET 1 AA3 2 LEU A 119 ASP A 121 0 SHEET 2 AA3 2 VAL A 128 TRP A 129 -1 O VAL A 128 N ILE A 120 SHEET 1 AA4 4 LYS B 12 GLY B 15 0 SHEET 2 AA4 4 VAL B 4 ALA B 9 -1 N ILE B 7 O TYR B 14 SHEET 3 AA4 4 GLN B 74 TRP B 79 -1 O GLN B 78 N GLY B 6 SHEET 4 AA4 4 THR B 140 THR B 144 -1 O VAL B 143 N ILE B 75 SHEET 1 AA5 6 ALA B 67 ALA B 70 0 SHEET 2 AA5 6 GLN B 173 THR B 184 1 O THR B 184 N VAL B 69 SHEET 3 AA5 6 GLY B 152 ALA B 162 -1 N LEU B 156 O PHE B 179 SHEET 4 AA5 6 LEU B 90 PRO B 96 -1 N TYR B 93 O ARG B 157 SHEET 5 AA5 6 LYS B 110 GLN B 117 -1 O VAL B 112 N LEU B 94 SHEET 6 AA5 6 THR B 194 ALA B 195 -1 O THR B 194 N PHE B 111 SHEET 1 AA6 2 LEU B 119 ASP B 121 0 SHEET 2 AA6 2 VAL B 128 TRP B 129 -1 O VAL B 128 N ILE B 120 SSBOND 1 CYS A 56 CYS A 178 1555 1555 2.04 SSBOND 2 CYS A 97 CYS A 101 1555 1555 2.04 SSBOND 3 CYS B 56 CYS B 178 1555 1555 2.11 SSBOND 4 CYS B 97 CYS B 101 1555 1555 2.03 LINK C HIC A 1 N GLY A 2 1555 1555 1.32 LINK ND2 ASN A 138 C1 NAG A 302 1555 1555 1.43 LINK C HIC B 1 N GLY B 2 1555 1555 1.34 LINK N HIC A 1 CU CU A 301 1555 1555 2.22 LINK ND1 HIC A 1 CU CU A 301 1555 1555 1.93 LINK NE2 HIS A 86 CU CU A 301 1555 1555 2.01 LINK CU CU A 301 O HOH A 484 1555 1555 2.44 LINK N HIC B 1 CU CU B 301 1555 1555 2.18 LINK ND1 HIC B 1 CU CU B 301 1555 1555 1.89 LINK NE2 HIS B 86 CU CU B 301 1555 1555 1.97 LINK CU CU B 301 O HOH B 430 1555 1555 2.01 LINK CU CU B 301 O HOH B 656 1555 1555 2.61 CISPEP 1 PRO A 125 PRO A 126 0 10.36 CISPEP 2 PRO B 125 PRO B 126 0 7.91 CRYST1 44.300 49.110 53.960 75.86 88.38 76.31 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022573 -0.005499 0.000729 0.00000 SCALE2 0.000000 0.020958 -0.005288 0.00000 SCALE3 0.000000 0.000000 0.019121 0.00000 HETATM 1 N HIC A 1 -2.042 -12.011 -6.660 1.00 18.88 N ANISOU 1 N HIC A 1 1713 2661 2797 887 -1076 755 N HETATM 2 CA HIC A 1 -3.487 -11.643 -6.422 1.00 14.67 C ANISOU 2 CA HIC A 1 1719 1991 1861 533 -515 799 C HETATM 3 C HIC A 1 -3.777 -11.771 -4.960 1.00 15.18 C ANISOU 3 C HIC A 1 1758 2134 1874 1052 -437 575 C HETATM 4 O HIC A 1 -3.420 -12.815 -4.333 1.00 18.49 O ANISOU 4 O HIC A 1 2684 2249 2092 1106 -849 918 O HETATM 5 CB HIC A 1 -4.485 -12.427 -7.247 1.00 15.70 C ANISOU 5 CB HIC A 1 1549 2145 2268 622 -420 662 C HETATM 6 CG HIC A 1 -4.461 -11.949 -8.709 1.00 17.78 C ANISOU 6 CG HIC A 1 1983 2494 2279 607 -585 834 C HETATM 7 ND1 HIC A 1 -3.322 -11.812 -9.498 1.00 15.62 N ANISOU 7 ND1 HIC A 1 1532 2447 1954 798 -806 600 N HETATM 8 CD2 HIC A 1 -5.592 -11.566 -9.483 1.00 18.56 C ANISOU 8 CD2 HIC A 1 1730 2696 2625 648 -675 358 C HETATM 9 CE1 HIC A 1 -3.703 -11.321 -10.716 1.00 17.51 C ANISOU 9 CE1 HIC A 1 1994 2497 2162 225 -677 1169 C HETATM 10 NE2 HIC A 1 -5.053 -11.214 -10.646 1.00 19.94 N ANISOU 10 NE2 HIC A 1 1926 3088 2561 383 -480 330 N HETATM 11 CZ HIC A 1 -5.853 -10.744 -11.777 1.00 32.49 C ANISOU 11 CZ HIC A 1 4427 5176 2739 245 -1159 1239 C