HEADER HYDROLASE 22-AUG-18 6HFY TITLE INFLUENZA A VIRUS N6 NEURAMINIDASE COMPLEX WITH DANA TITLE 2 (DUCK/ENGLAND/56). COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAMINIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.2.1.18 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/DUCK/ENGLAND/1/1956 SOURCE 3 H11N6); SOURCE 4 ORGANISM_TAXID: 383550; SOURCE 5 STRAIN: A/DUCK/ENGLAND/1/1956 H11N6 KEYWDS INFLUENZA, A, DANA, N6, NEURAMINIDASE, DUCK, VIRUS, ENZYME, KEYWDS 2 INHIBITOR, COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.T.SALINGER,J.R.HOBBS,J.W.MURRAY,W.G.LAVER,P.KUHN,E.F.GARMAN REVDAT 5 13-NOV-24 6HFY 1 REMARK REVDAT 4 17-JAN-24 6HFY 1 HETSYN LINK REVDAT 3 29-JUL-20 6HFY 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 05-SEP-18 6HFY 1 AUTHOR JRNL REVDAT 1 29-AUG-18 6HFY 0 JRNL AUTH M.T.SALINGER,J.R.HOBBS,J.W.MURRAY,W.G.LAVER,P.KUHN, JRNL AUTH 2 E.F.GARMAN JRNL TITL HIGH RESOLUTION STRUCTURES OF VIRAL NEURAMINIDASE WITH DRUGS JRNL TITL 2 BOUND IN THE ACTIVE SITE. (IN PREPARATION) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 174836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9170 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11650 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 630 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12036 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 564 REMARK 3 SOLVENT ATOMS : 1306 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : -0.31000 REMARK 3 B33 (A**2) : 0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.091 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.990 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13301 ; 0.016 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 11343 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18166 ; 1.768 ; 1.709 REMARK 3 BOND ANGLES OTHERS (DEGREES): 26876 ; 1.065 ; 1.683 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1626 ; 7.913 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 654 ;32.708 ;21.972 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2100 ;12.689 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 85 ;17.128 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1855 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 14874 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2403 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6408 ; 0.534 ; 0.925 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 6407 ; 0.534 ; 0.925 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8066 ; 0.815 ; 1.386 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 8067 ; 0.815 ; 1.386 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6893 ; 1.119 ; 1.110 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6893 ; 1.118 ; 1.110 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 10101 ; 1.733 ; 1.622 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15383 ; 3.577 ;12.361 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15384 ; 3.577 ;12.363 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 88 A 476 REMARK 3 ORIGIN FOR THE GROUP (A): 30.5321 -0.9187 51.1398 REMARK 3 T TENSOR REMARK 3 T11: 0.0322 T22: 0.0388 REMARK 3 T33: 0.0057 T12: 0.0015 REMARK 3 T13: 0.0038 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.9351 L22: 0.3277 REMARK 3 L33: 0.6905 L12: -0.0904 REMARK 3 L13: 0.0987 L23: 0.0813 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 0.1632 S13: -0.0193 REMARK 3 S21: -0.0309 S22: -0.0118 S23: -0.0036 REMARK 3 S31: -0.0053 S32: 0.0351 S33: 0.0019 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 88 B 476 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5938 -6.9724 77.3236 REMARK 3 T TENSOR REMARK 3 T11: 0.0151 T22: 0.0203 REMARK 3 T33: 0.0213 T12: 0.0018 REMARK 3 T13: -0.0033 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.8610 L22: 0.3561 REMARK 3 L33: 0.8893 L12: 0.1099 REMARK 3 L13: -0.0911 L23: 0.0579 REMARK 3 S TENSOR REMARK 3 S11: -0.0013 S12: 0.0035 S13: -0.0522 REMARK 3 S21: -0.0152 S22: 0.0063 S23: 0.0300 REMARK 3 S31: 0.0699 S32: -0.0851 S33: -0.0049 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 88 C 476 REMARK 3 ORIGIN FOR THE GROUP (A): 56.9235 -1.5040 80.2024 REMARK 3 T TENSOR REMARK 3 T11: 0.0156 T22: 0.0230 REMARK 3 T33: 0.0039 T12: -0.0119 REMARK 3 T13: -0.0000 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.9076 L22: 0.4061 REMARK 3 L33: 0.6803 L12: -0.1234 REMARK 3 L13: -0.0482 L23: -0.1436 REMARK 3 S TENSOR REMARK 3 S11: 0.0088 S12: -0.0249 S13: -0.0099 REMARK 3 S21: -0.0032 S22: -0.0157 S23: -0.0289 REMARK 3 S31: 0.0208 S32: 0.0760 S33: 0.0069 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 88 D 476 REMARK 3 ORIGIN FOR THE GROUP (A): 28.0319 -7.1175 106.5203 REMARK 3 T TENSOR REMARK 3 T11: 0.0190 T22: 0.0643 REMARK 3 T33: 0.0061 T12: 0.0047 REMARK 3 T13: 0.0046 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.7524 L22: 0.4555 REMARK 3 L33: 0.6606 L12: 0.0627 REMARK 3 L13: 0.0745 L23: -0.1404 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: -0.1252 S13: -0.0549 REMARK 3 S21: 0.0256 S22: 0.0017 S23: 0.0099 REMARK 3 S31: 0.0020 S32: -0.0054 S33: -0.0015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6HFY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011558. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 184006 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 20.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1V0Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: N6 CRYSTALS WERE GROWN BY HANGING-DROP REMARK 280 VAPOUR DIFFUSION AGAINST 1:1 20%(W/V) PEG-3350 AND 2 MICROM REMARK 280 CACL2 IN 150MM NACL AT 20 DEGREES CELSIUS, STARTING WITH EQUAL REMARK 280 VOLUMES OF N6 (20MG/ML IN SALINE) AND 20% (W/V) PEG 3350 AND 2 REMARK 280 MICROM IN 1% SALINE. MICROSEEDING WITH CRYSTALS OF NATIVE N6 WAS REMARK 280 CARRIED OUT USING A SUPER SATURATED SOLUTION OF N6 NA IN 20% PEG REMARK 280 3350. INHIBITOR COMPLEX OBTAINED BY SOAKING N6 CRYSTALS IN A REMARK 280 SOLUTION OF 20% PEG 3350 IN 1% SALINE (MOTHER LIQUOR) CONTAINING REMARK 280 27MM DANA AT PH7 FOR 3 HOURS AT 18 DEGREES CELSIUS., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.88150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 603 O HOH C 838 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 465 CD GLU B 465 OE1 0.078 REMARK 500 GLU D 162 CD GLU D 162 OE1 0.073 REMARK 500 GLU D 418 CD GLU D 418 OE2 0.072 REMARK 500 GLU D 470 CD GLU D 470 OE2 -0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 190 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG D 250 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG D 250 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG D 432 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 111 -32.54 -131.92 REMARK 500 ASN A 201 41.00 -165.19 REMARK 500 ASN A 222 81.75 -156.03 REMARK 500 THR A 226 -158.55 -146.94 REMARK 500 LYS A 265 142.19 -171.79 REMARK 500 ALA A 284 139.92 -170.63 REMARK 500 LYS A 316 -158.36 -166.28 REMARK 500 ASP A 357 62.92 -150.35 REMARK 500 SER A 404 -133.35 -113.81 REMARK 500 TRP A 460 57.02 -108.62 REMARK 500 LEU B 87 49.57 -88.93 REMARK 500 ASP B 111 -33.72 -131.20 REMARK 500 ASN B 201 41.10 -161.75 REMARK 500 ASN B 222 84.22 -160.30 REMARK 500 THR B 226 -154.97 -144.48 REMARK 500 CYS B 292 -169.90 -122.50 REMARK 500 LYS B 297 -60.93 -125.56 REMARK 500 LYS B 316 -155.44 -162.32 REMARK 500 SER B 404 -132.22 -112.40 REMARK 500 TRP B 460 55.29 -108.58 REMARK 500 ASP C 111 -36.56 -136.41 REMARK 500 ASN C 201 40.75 -161.16 REMARK 500 ASN C 222 82.14 -159.15 REMARK 500 THR C 226 -152.87 -142.23 REMARK 500 LYS C 297 -59.77 -123.38 REMARK 500 LYS C 316 -157.21 -166.88 REMARK 500 ASP C 357 56.17 -152.63 REMARK 500 SER C 404 -137.33 -113.52 REMARK 500 TRP C 460 52.16 -108.62 REMARK 500 ASP D 111 -40.81 -133.00 REMARK 500 ASN D 201 39.85 -159.90 REMARK 500 ASN D 222 80.67 -158.19 REMARK 500 THR D 226 -155.15 -146.85 REMARK 500 CYS D 292 -167.19 -124.77 REMARK 500 LYS D 297 -62.29 -130.28 REMARK 500 LYS D 316 -158.24 -161.02 REMARK 500 ASP D 357 61.55 -156.55 REMARK 500 SER D 404 -132.29 -108.60 REMARK 500 TRP D 460 54.35 -106.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 250 0.11 SIDE CHAIN REMARK 500 ARG A 454 0.12 SIDE CHAIN REMARK 500 ARG B 82 0.11 SIDE CHAIN REMARK 500 ARG B 432 0.09 SIDE CHAIN REMARK 500 ARG B 454 0.18 SIDE CHAIN REMARK 500 ARG C 82 0.10 SIDE CHAIN REMARK 500 ARG C 250 0.08 SIDE CHAIN REMARK 500 ARG C 454 0.24 SIDE CHAIN REMARK 500 ARG D 82 0.09 SIDE CHAIN REMARK 500 ARG D 454 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 922 DISTANCE = 5.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 514 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 294 O REMARK 620 2 GLY A 298 O 87.7 REMARK 620 3 ASP A 325 OD2 91.5 94.0 REMARK 620 4 PRO A 348 O 98.5 160.8 103.9 REMARK 620 5 HOH A 650 O 170.8 86.0 95.6 85.4 REMARK 620 6 HOH A 848 O 88.5 92.6 173.4 69.6 85.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 514 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 294 O REMARK 620 2 GLY B 298 O 86.8 REMARK 620 3 ASP B 325 OD2 95.2 94.0 REMARK 620 4 PRO B 348 O 94.7 161.2 104.4 REMARK 620 5 HOH B 728 O 168.8 89.0 95.5 86.0 REMARK 620 6 HOH B 823 O 84.9 93.8 172.2 67.8 85.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 512 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 294 O REMARK 620 2 GLY C 298 O 87.8 REMARK 620 3 ASP C 325 OD2 97.7 98.5 REMARK 620 4 PRO C 348 O 98.2 156.5 103.1 REMARK 620 5 HOH C 711 O 165.0 86.4 96.8 82.1 REMARK 620 6 HOH C 799 O 81.7 89.4 172.0 69.1 84.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 511 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 294 O REMARK 620 2 GLY D 298 O 91.1 REMARK 620 3 ASP D 325 OD2 94.0 98.5 REMARK 620 4 PRO D 348 O 92.8 156.7 104.1 REMARK 620 5 HOH D 695 O 170.9 82.9 93.7 90.0 REMARK 620 6 HOH D 740 O 82.8 92.4 168.7 65.4 90.5 REMARK 620 N 1 2 3 4 5 DBREF 6HFY A 82 470 UNP Q6XV27 NRAM_I56A2 82 470 DBREF 6HFY B 82 470 UNP Q6XV27 NRAM_I56A2 82 470 DBREF 6HFY C 82 470 UNP Q6XV27 NRAM_I56A2 82 470 DBREF 6HFY D 82 470 UNP Q6XV27 NRAM_I56A2 82 470 SEQRES 1 A 389 ARG THR PHE LEU ASN LEU THR LYS PRO LEU CYS GLU VAL SEQRES 2 A 389 ASN SER TRP HIS ILE LEU SER LYS ASP ASN ALA ILE ARG SEQRES 3 A 389 ILE GLY GLU ASP ALA HIS ILE LEU VAL THR ARG GLU PRO SEQRES 4 A 389 TYR LEU SER CYS ASP PRO GLN GLY CYS ARG MET PHE ALA SEQRES 5 A 389 LEU SER GLN GLY THR THR LEU ARG GLY ARG HIS ALA ASN SEQRES 6 A 389 GLY THR ILE HIS ASP ARG SER PRO PHE ARG ALA LEU ILE SEQRES 7 A 389 SER TRP GLU MET GLY GLN ALA PRO SER PRO TYR ASN THR SEQRES 8 A 389 ARG VAL GLU CYS ILE GLY TRP SER SER THR SER CYS HIS SEQRES 9 A 389 ASP GLY MET SER ARG MET SER ILE CYS MET SER GLY PRO SEQRES 10 A 389 ASN ASN ASN ALA SER ALA VAL VAL TRP TYR GLY GLY ARG SEQRES 11 A 389 PRO ILE THR GLU ILE PRO SER TRP ALA GLY ASN ILE LEU SEQRES 12 A 389 ARG THR GLN GLU SER GLU CYS VAL CYS HIS LYS GLY VAL SEQRES 13 A 389 CYS PRO VAL VAL MET THR ASP GLY PRO ALA ASN ASN ARG SEQRES 14 A 389 ALA ALA THR LYS ILE ILE TYR PHE LYS GLU GLY LYS ILE SEQRES 15 A 389 GLN LYS ILE GLU GLU LEU ALA GLY ASN ALA GLN HIS ILE SEQRES 16 A 389 GLU GLU CYS SER CYS TYR GLY ALA GLY GLY VAL ILE LYS SEQRES 17 A 389 CYS ILE CYS ARG ASP ASN TRP LYS GLY ALA ASN ARG PRO SEQRES 18 A 389 VAL ILE THR ILE ASP PRO GLU MET MET THR HIS THR SER SEQRES 19 A 389 LYS TYR LEU CYS SER LYS VAL LEU THR ASP THR SER ARG SEQRES 20 A 389 PRO ASN ASP PRO THR ASN GLY ASN CYS ASP ALA PRO ILE SEQRES 21 A 389 THR GLY GLY SER PRO ASP PRO GLY VAL LYS GLY PHE ALA SEQRES 22 A 389 PHE LEU ASP GLY GLU ASN SER TRP LEU GLY ARG THR ILE SEQRES 23 A 389 SER LYS ASP SER ARG SER GLY TYR GLU MET LEU LYS VAL SEQRES 24 A 389 PRO ASN ALA GLU THR ASP ILE GLN SER GLY PRO ILE SER SEQRES 25 A 389 ASN GLN VAL ILE VAL ASN ASN GLN ASN TRP SER GLY TYR SEQRES 26 A 389 SER GLY ALA PHE ILE ASP TYR TRP ALA ASN LYS GLU CYS SEQRES 27 A 389 PHE ASN PRO CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG SEQRES 28 A 389 PRO LYS GLU SER SER VAL LEU TRP THR SER ASN SER ILE SEQRES 29 A 389 VAL ALA LEU CYS GLY SER LYS LYS ARG LEU GLY SER TRP SEQRES 30 A 389 SER TRP HIS ASP GLY ALA GLU ILE ILE TYR PHE GLU SEQRES 1 B 389 ARG THR PHE LEU ASN LEU THR LYS PRO LEU CYS GLU VAL SEQRES 2 B 389 ASN SER TRP HIS ILE LEU SER LYS ASP ASN ALA ILE ARG SEQRES 3 B 389 ILE GLY GLU ASP ALA HIS ILE LEU VAL THR ARG GLU PRO SEQRES 4 B 389 TYR LEU SER CYS ASP PRO GLN GLY CYS ARG MET PHE ALA SEQRES 5 B 389 LEU SER GLN GLY THR THR LEU ARG GLY ARG HIS ALA ASN SEQRES 6 B 389 GLY THR ILE HIS ASP ARG SER PRO PHE ARG ALA LEU ILE SEQRES 7 B 389 SER TRP GLU MET GLY GLN ALA PRO SER PRO TYR ASN THR SEQRES 8 B 389 ARG VAL GLU CYS ILE GLY TRP SER SER THR SER CYS HIS SEQRES 9 B 389 ASP GLY MET SER ARG MET SER ILE CYS MET SER GLY PRO SEQRES 10 B 389 ASN ASN ASN ALA SER ALA VAL VAL TRP TYR GLY GLY ARG SEQRES 11 B 389 PRO ILE THR GLU ILE PRO SER TRP ALA GLY ASN ILE LEU SEQRES 12 B 389 ARG THR GLN GLU SER GLU CYS VAL CYS HIS LYS GLY VAL SEQRES 13 B 389 CYS PRO VAL VAL MET THR ASP GLY PRO ALA ASN ASN ARG SEQRES 14 B 389 ALA ALA THR LYS ILE ILE TYR PHE LYS GLU GLY LYS ILE SEQRES 15 B 389 GLN LYS ILE GLU GLU LEU ALA GLY ASN ALA GLN HIS ILE SEQRES 16 B 389 GLU GLU CYS SER CYS TYR GLY ALA GLY GLY VAL ILE LYS SEQRES 17 B 389 CYS ILE CYS ARG ASP ASN TRP LYS GLY ALA ASN ARG PRO SEQRES 18 B 389 VAL ILE THR ILE ASP PRO GLU MET MET THR HIS THR SER SEQRES 19 B 389 LYS TYR LEU CYS SER LYS VAL LEU THR ASP THR SER ARG SEQRES 20 B 389 PRO ASN ASP PRO THR ASN GLY ASN CYS ASP ALA PRO ILE SEQRES 21 B 389 THR GLY GLY SER PRO ASP PRO GLY VAL LYS GLY PHE ALA SEQRES 22 B 389 PHE LEU ASP GLY GLU ASN SER TRP LEU GLY ARG THR ILE SEQRES 23 B 389 SER LYS ASP SER ARG SER GLY TYR GLU MET LEU LYS VAL SEQRES 24 B 389 PRO ASN ALA GLU THR ASP ILE GLN SER GLY PRO ILE SER SEQRES 25 B 389 ASN GLN VAL ILE VAL ASN ASN GLN ASN TRP SER GLY TYR SEQRES 26 B 389 SER GLY ALA PHE ILE ASP TYR TRP ALA ASN LYS GLU CYS SEQRES 27 B 389 PHE ASN PRO CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG SEQRES 28 B 389 PRO LYS GLU SER SER VAL LEU TRP THR SER ASN SER ILE SEQRES 29 B 389 VAL ALA LEU CYS GLY SER LYS LYS ARG LEU GLY SER TRP SEQRES 30 B 389 SER TRP HIS ASP GLY ALA GLU ILE ILE TYR PHE GLU SEQRES 1 C 389 ARG THR PHE LEU ASN LEU THR LYS PRO LEU CYS GLU VAL SEQRES 2 C 389 ASN SER TRP HIS ILE LEU SER LYS ASP ASN ALA ILE ARG SEQRES 3 C 389 ILE GLY GLU ASP ALA HIS ILE LEU VAL THR ARG GLU PRO SEQRES 4 C 389 TYR LEU SER CYS ASP PRO GLN GLY CYS ARG MET PHE ALA SEQRES 5 C 389 LEU SER GLN GLY THR THR LEU ARG GLY ARG HIS ALA ASN SEQRES 6 C 389 GLY THR ILE HIS ASP ARG SER PRO PHE ARG ALA LEU ILE SEQRES 7 C 389 SER TRP GLU MET GLY GLN ALA PRO SER PRO TYR ASN THR SEQRES 8 C 389 ARG VAL GLU CYS ILE GLY TRP SER SER THR SER CYS HIS SEQRES 9 C 389 ASP GLY MET SER ARG MET SER ILE CYS MET SER GLY PRO SEQRES 10 C 389 ASN ASN ASN ALA SER ALA VAL VAL TRP TYR GLY GLY ARG SEQRES 11 C 389 PRO ILE THR GLU ILE PRO SER TRP ALA GLY ASN ILE LEU SEQRES 12 C 389 ARG THR GLN GLU SER GLU CYS VAL CYS HIS LYS GLY VAL SEQRES 13 C 389 CYS PRO VAL VAL MET THR ASP GLY PRO ALA ASN ASN ARG SEQRES 14 C 389 ALA ALA THR LYS ILE ILE TYR PHE LYS GLU GLY LYS ILE SEQRES 15 C 389 GLN LYS ILE GLU GLU LEU ALA GLY ASN ALA GLN HIS ILE SEQRES 16 C 389 GLU GLU CYS SER CYS TYR GLY ALA GLY GLY VAL ILE LYS SEQRES 17 C 389 CYS ILE CYS ARG ASP ASN TRP LYS GLY ALA ASN ARG PRO SEQRES 18 C 389 VAL ILE THR ILE ASP PRO GLU MET MET THR HIS THR SER SEQRES 19 C 389 LYS TYR LEU CYS SER LYS VAL LEU THR ASP THR SER ARG SEQRES 20 C 389 PRO ASN ASP PRO THR ASN GLY ASN CYS ASP ALA PRO ILE SEQRES 21 C 389 THR GLY GLY SER PRO ASP PRO GLY VAL LYS GLY PHE ALA SEQRES 22 C 389 PHE LEU ASP GLY GLU ASN SER TRP LEU GLY ARG THR ILE SEQRES 23 C 389 SER LYS ASP SER ARG SER GLY TYR GLU MET LEU LYS VAL SEQRES 24 C 389 PRO ASN ALA GLU THR ASP ILE GLN SER GLY PRO ILE SER SEQRES 25 C 389 ASN GLN VAL ILE VAL ASN ASN GLN ASN TRP SER GLY TYR SEQRES 26 C 389 SER GLY ALA PHE ILE ASP TYR TRP ALA ASN LYS GLU CYS SEQRES 27 C 389 PHE ASN PRO CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG SEQRES 28 C 389 PRO LYS GLU SER SER VAL LEU TRP THR SER ASN SER ILE SEQRES 29 C 389 VAL ALA LEU CYS GLY SER LYS LYS ARG LEU GLY SER TRP SEQRES 30 C 389 SER TRP HIS ASP GLY ALA GLU ILE ILE TYR PHE GLU SEQRES 1 D 389 ARG THR PHE LEU ASN LEU THR LYS PRO LEU CYS GLU VAL SEQRES 2 D 389 ASN SER TRP HIS ILE LEU SER LYS ASP ASN ALA ILE ARG SEQRES 3 D 389 ILE GLY GLU ASP ALA HIS ILE LEU VAL THR ARG GLU PRO SEQRES 4 D 389 TYR LEU SER CYS ASP PRO GLN GLY CYS ARG MET PHE ALA SEQRES 5 D 389 LEU SER GLN GLY THR THR LEU ARG GLY ARG HIS ALA ASN SEQRES 6 D 389 GLY THR ILE HIS ASP ARG SER PRO PHE ARG ALA LEU ILE SEQRES 7 D 389 SER TRP GLU MET GLY GLN ALA PRO SER PRO TYR ASN THR SEQRES 8 D 389 ARG VAL GLU CYS ILE GLY TRP SER SER THR SER CYS HIS SEQRES 9 D 389 ASP GLY MET SER ARG MET SER ILE CYS MET SER GLY PRO SEQRES 10 D 389 ASN ASN ASN ALA SER ALA VAL VAL TRP TYR GLY GLY ARG SEQRES 11 D 389 PRO ILE THR GLU ILE PRO SER TRP ALA GLY ASN ILE LEU SEQRES 12 D 389 ARG THR GLN GLU SER GLU CYS VAL CYS HIS LYS GLY VAL SEQRES 13 D 389 CYS PRO VAL VAL MET THR ASP GLY PRO ALA ASN ASN ARG SEQRES 14 D 389 ALA ALA THR LYS ILE ILE TYR PHE LYS GLU GLY LYS ILE SEQRES 15 D 389 GLN LYS ILE GLU GLU LEU ALA GLY ASN ALA GLN HIS ILE SEQRES 16 D 389 GLU GLU CYS SER CYS TYR GLY ALA GLY GLY VAL ILE LYS SEQRES 17 D 389 CYS ILE CYS ARG ASP ASN TRP LYS GLY ALA ASN ARG PRO SEQRES 18 D 389 VAL ILE THR ILE ASP PRO GLU MET MET THR HIS THR SER SEQRES 19 D 389 LYS TYR LEU CYS SER LYS VAL LEU THR ASP THR SER ARG SEQRES 20 D 389 PRO ASN ASP PRO THR ASN GLY ASN CYS ASP ALA PRO ILE SEQRES 21 D 389 THR GLY GLY SER PRO ASP PRO GLY VAL LYS GLY PHE ALA SEQRES 22 D 389 PHE LEU ASP GLY GLU ASN SER TRP LEU GLY ARG THR ILE SEQRES 23 D 389 SER LYS ASP SER ARG SER GLY TYR GLU MET LEU LYS VAL SEQRES 24 D 389 PRO ASN ALA GLU THR ASP ILE GLN SER GLY PRO ILE SER SEQRES 25 D 389 ASN GLN VAL ILE VAL ASN ASN GLN ASN TRP SER GLY TYR SEQRES 26 D 389 SER GLY ALA PHE ILE ASP TYR TRP ALA ASN LYS GLU CYS SEQRES 27 D 389 PHE ASN PRO CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG SEQRES 28 D 389 PRO LYS GLU SER SER VAL LEU TRP THR SER ASN SER ILE SEQRES 29 D 389 VAL ALA LEU CYS GLY SER LYS LYS ARG LEU GLY SER TRP SEQRES 30 D 389 SER TRP HIS ASP GLY ALA GLU ILE ILE TYR PHE GLU HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET MAN F 6 11 HET MAN F 7 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET MAN H 6 11 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET MAN I 4 11 HET MAN I 5 11 HET MAN I 6 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET MAN J 4 11 HET MAN J 5 11 HET MAN J 6 11 HET NAG A 501 14 HET DAN A 511 20 HET GOL A 512 6 HET GOL A 513 6 HET CA A 514 1 HET NAG B 501 14 HET DAN B 510 20 HET GOL B 511 6 HET GOL B 512 6 HET GOL B 513 6 HET CA B 514 1 HET CA B 515 1 HET NAG C 501 14 HET NAG C 502 14 HET DAN C 509 20 HET GOL C 510 6 HET GOL C 511 6 HET CA C 512 1 HET NAG D 501 14 HET DAN D 508 20 HET GOL D 509 6 HET GOL D 510 6 HET CA D 511 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM DAN 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN DAN NEU5AC2EN HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 NAG 17(C8 H15 N O6) FORMUL 6 BMA 4(C6 H12 O6) FORMUL 6 MAN 13(C6 H12 O6) FORMUL 12 DAN 4(C11 H17 N O8) FORMUL 13 GOL 9(C3 H8 O3) FORMUL 15 CA 5(CA 2+) FORMUL 34 HOH *1306(H2 O) HELIX 1 AA1 ASN A 104 GLU A 110 1 7 HELIX 2 AA2 GLY A 142 ASN A 146 5 5 HELIX 3 AA3 PRO A 198 ASN A 201 5 4 HELIX 4 AA4 GLU A 465 GLU A 470 5 6 HELIX 5 AA5 ASN B 104 GLU B 110 1 7 HELIX 6 AA6 GLY B 142 ASN B 146 5 5 HELIX 7 AA7 GLU B 465 GLU B 470 5 6 HELIX 8 AA8 ASN C 104 GLU C 110 1 7 HELIX 9 AA9 GLY C 142 ASN C 146 5 5 HELIX 10 AB1 GLU C 465 GLU C 470 5 6 HELIX 11 AB2 ASN D 104 GLU D 110 1 7 HELIX 12 AB3 GLY D 142 ASN D 146 5 5 HELIX 13 AB4 GLU D 465 GLU D 470 5 6 SHEET 1 AA1 4 SER A 96 LYS A 102 0 SHEET 2 AA1 4 THR A 441 SER A 451 -1 O CYS A 449 N HIS A 98 SHEET 3 AA1 4 PRO A 422 GLY A 431 -1 N PRO A 422 O GLY A 450 SHEET 4 AA1 4 SER A 407 ILE A 411 -1 N GLY A 408 O TYR A 425 SHEET 1 AA2 4 LEU A 115 ASP A 125 0 SHEET 2 AA2 4 GLY A 128 THR A 139 -1 O THR A 138 N VAL A 116 SHEET 3 AA2 4 ALA A 157 GLU A 162 -1 O ALA A 157 N SER A 135 SHEET 4 AA2 4 ARG A 173 ILE A 177 -1 O ARG A 173 N SER A 160 SHEET 1 AA3 4 SER A 180 HIS A 185 0 SHEET 2 AA3 4 ARG A 190 SER A 196 -1 O MET A 191 N CYS A 184 SHEET 3 AA3 4 SER A 203 TYR A 208 -1 O TRP A 207 N SER A 192 SHEET 4 AA3 4 ARG A 211 PRO A 217 -1 O ILE A 213 N VAL A 206 SHEET 1 AA4 3 CYS A 238 ASP A 244 0 SHEET 2 AA4 3 ALA A 252 LYS A 259 -1 O PHE A 258 N CYS A 238 SHEET 3 AA4 3 LYS A 262 GLU A 268 -1 O GLN A 264 N TYR A 257 SHEET 1 AA5 4 GLU A 277 ALA A 284 0 SHEET 2 AA5 4 VAL A 287 ARG A 293 -1 O ILE A 291 N SER A 280 SHEET 3 AA5 4 PRO A 302 ASP A 307 -1 O ILE A 306 N ILE A 288 SHEET 4 AA5 4 THR A 312 TYR A 317 -1 O THR A 312 N ASP A 307 SHEET 1 AA6 4 ALA A 354 PHE A 355 0 SHEET 2 AA6 4 TRP A 362 ARG A 365 -1 O TRP A 362 N PHE A 355 SHEET 3 AA6 4 SER A 373 LYS A 379 -1 O LEU A 378 N LEU A 363 SHEET 4 AA6 4 SER A 393 TRP A 403 -1 O ASN A 402 N GLY A 374 SHEET 1 AA7 4 SER B 96 LYS B 102 0 SHEET 2 AA7 4 THR B 441 SER B 451 -1 O CYS B 449 N HIS B 98 SHEET 3 AA7 4 CYS B 423 GLY B 431 -1 N LEU B 428 O SER B 444 SHEET 4 AA7 4 SER B 407 PHE B 410 -1 N PHE B 410 O CYS B 423 SHEET 1 AA8 4 LEU B 115 CYS B 124 0 SHEET 2 AA8 4 CYS B 129 THR B 139 -1 O THR B 138 N VAL B 116 SHEET 3 AA8 4 ALA B 157 GLU B 162 -1 O ILE B 159 N ALA B 133 SHEET 4 AA8 4 ARG B 173 ILE B 177 -1 O ARG B 173 N SER B 160 SHEET 1 AA9 4 SER B 180 HIS B 185 0 SHEET 2 AA9 4 ARG B 190 SER B 196 -1 O MET B 191 N CYS B 184 SHEET 3 AA9 4 SER B 203 TYR B 208 -1 O TRP B 207 N SER B 192 SHEET 4 AA9 4 ARG B 211 PRO B 217 -1 O ILE B 213 N VAL B 206 SHEET 1 AB1 3 CYS B 238 ASP B 244 0 SHEET 2 AB1 3 ALA B 252 LYS B 259 -1 O PHE B 258 N CYS B 238 SHEET 3 AB1 3 LYS B 262 GLU B 268 -1 O GLN B 264 N TYR B 257 SHEET 1 AB2 4 GLU B 277 ALA B 284 0 SHEET 2 AB2 4 VAL B 287 ARG B 293 -1 O ILE B 291 N SER B 280 SHEET 3 AB2 4 PRO B 302 ASP B 307 -1 O ILE B 306 N ILE B 288 SHEET 4 AB2 4 THR B 312 TYR B 317 -1 O THR B 312 N ASP B 307 SHEET 1 AB3 4 ALA B 354 PHE B 355 0 SHEET 2 AB3 4 TRP B 362 ARG B 365 -1 O TRP B 362 N PHE B 355 SHEET 3 AB3 4 SER B 373 LYS B 379 -1 O LEU B 378 N LEU B 363 SHEET 4 AB3 4 SER B 393 TRP B 403 -1 O ILE B 397 N TYR B 375 SHEET 1 AB4 4 SER C 96 LYS C 102 0 SHEET 2 AB4 4 THR C 441 SER C 451 -1 O ALA C 447 N LEU C 100 SHEET 3 AB4 4 PRO C 422 GLY C 431 -1 N PRO C 422 O GLY C 450 SHEET 4 AB4 4 SER C 407 ILE C 411 -1 N PHE C 410 O CYS C 423 SHEET 1 AB5 4 LEU C 115 ASP C 125 0 SHEET 2 AB5 4 GLY C 128 THR C 139 -1 O ARG C 130 N SER C 123 SHEET 3 AB5 4 ALA C 157 GLU C 162 -1 O ILE C 159 N ALA C 133 SHEET 4 AB5 4 ARG C 173 ILE C 177 -1 O ARG C 173 N SER C 160 SHEET 1 AB6 4 SER C 180 HIS C 185 0 SHEET 2 AB6 4 ARG C 190 SER C 196 -1 O MET C 191 N CYS C 184 SHEET 3 AB6 4 SER C 203 TYR C 208 -1 O TRP C 207 N SER C 192 SHEET 4 AB6 4 ARG C 211 PRO C 217 -1 O ILE C 213 N VAL C 206 SHEET 1 AB7 3 CYS C 238 ASP C 244 0 SHEET 2 AB7 3 ALA C 252 LYS C 259 -1 O LYS C 254 N MET C 242 SHEET 3 AB7 3 LYS C 262 GLU C 268 -1 O GLN C 264 N TYR C 257 SHEET 1 AB8 4 GLU C 277 ALA C 284 0 SHEET 2 AB8 4 VAL C 287 ARG C 293 -1 O ILE C 291 N SER C 280 SHEET 3 AB8 4 PRO C 302 ASP C 307 -1 O ILE C 306 N ILE C 288 SHEET 4 AB8 4 THR C 312 TYR C 317 -1 O THR C 312 N ASP C 307 SHEET 1 AB9 4 ALA C 354 PHE C 355 0 SHEET 2 AB9 4 TRP C 362 ARG C 365 -1 O TRP C 362 N PHE C 355 SHEET 3 AB9 4 SER C 373 LYS C 379 -1 O LEU C 378 N LEU C 363 SHEET 4 AB9 4 SER C 393 TRP C 403 -1 O GLN C 395 N MET C 377 SHEET 1 AC1 4 SER D 96 LYS D 102 0 SHEET 2 AC1 4 THR D 441 SER D 451 -1 O CYS D 449 N HIS D 98 SHEET 3 AC1 4 PRO D 422 GLY D 431 -1 N LEU D 428 O SER D 444 SHEET 4 AC1 4 SER D 407 ILE D 411 -1 N PHE D 410 O CYS D 423 SHEET 1 AC2 4 LEU D 115 ASP D 125 0 SHEET 2 AC2 4 GLY D 128 THR D 139 -1 O PHE D 132 N TYR D 121 SHEET 3 AC2 4 ALA D 157 GLU D 162 -1 O ILE D 159 N ALA D 133 SHEET 4 AC2 4 ARG D 173 ILE D 177 -1 O GLU D 175 N LEU D 158 SHEET 1 AC3 4 SER D 180 HIS D 185 0 SHEET 2 AC3 4 ARG D 190 SER D 196 -1 O MET D 191 N CYS D 184 SHEET 3 AC3 4 SER D 203 TYR D 208 -1 O TRP D 207 N SER D 192 SHEET 4 AC3 4 ARG D 211 PRO D 217 -1 O ILE D 213 N VAL D 206 SHEET 1 AC4 3 CYS D 238 ASP D 244 0 SHEET 2 AC4 3 ALA D 252 LYS D 259 -1 O PHE D 258 N CYS D 238 SHEET 3 AC4 3 LYS D 262 GLU D 268 -1 O GLN D 264 N TYR D 257 SHEET 1 AC5 4 GLU D 277 ALA D 284 0 SHEET 2 AC5 4 VAL D 287 ARG D 293 -1 O ILE D 291 N SER D 280 SHEET 3 AC5 4 PRO D 302 ASP D 307 -1 O ILE D 306 N ILE D 288 SHEET 4 AC5 4 THR D 312 TYR D 317 -1 O THR D 312 N ASP D 307 SHEET 1 AC6 4 ALA D 354 PHE D 355 0 SHEET 2 AC6 4 TRP D 362 ARG D 365 -1 O TRP D 362 N PHE D 355 SHEET 3 AC6 4 SER D 373 LYS D 379 -1 O LEU D 378 N LEU D 363 SHEET 4 AC6 4 SER D 393 TRP D 403 -1 O ILE D 397 N TYR D 375 SSBOND 1 CYS A 92 CYS A 419 1555 1555 2.01 SSBOND 2 CYS A 124 CYS A 129 1555 1555 2.06 SSBOND 3 CYS A 176 CYS A 194 1555 1555 2.06 SSBOND 4 CYS A 184 CYS A 231 1555 1555 2.01 SSBOND 5 CYS A 233 CYS A 238 1555 1555 2.05 SSBOND 6 CYS A 279 CYS A 292 1555 1555 2.16 SSBOND 7 CYS A 281 CYS A 290 1555 1555 2.10 SSBOND 8 CYS A 319 CYS A 337 1555 1555 2.05 SSBOND 9 CYS A 423 CYS A 449 1555 1555 2.10 SSBOND 10 CYS B 92 CYS B 419 1555 1555 2.10 SSBOND 11 CYS B 124 CYS B 129 1555 1555 2.02 SSBOND 12 CYS B 176 CYS B 194 1555 1555 2.07 SSBOND 13 CYS B 184 CYS B 231 1555 1555 2.00 SSBOND 14 CYS B 233 CYS B 238 1555 1555 2.05 SSBOND 15 CYS B 279 CYS B 292 1555 1555 2.13 SSBOND 16 CYS B 281 CYS B 290 1555 1555 2.06 SSBOND 17 CYS B 319 CYS B 337 1555 1555 2.05 SSBOND 18 CYS B 423 CYS B 449 1555 1555 2.08 SSBOND 19 CYS C 92 CYS C 419 1555 1555 2.07 SSBOND 20 CYS C 124 CYS C 129 1555 1555 2.05 SSBOND 21 CYS C 176 CYS C 194 1555 1555 2.08 SSBOND 22 CYS C 184 CYS C 231 1555 1555 2.02 SSBOND 23 CYS C 233 CYS C 238 1555 1555 2.05 SSBOND 24 CYS C 279 CYS C 292 1555 1555 2.12 SSBOND 25 CYS C 281 CYS C 290 1555 1555 2.07 SSBOND 26 CYS C 319 CYS C 337 1555 1555 2.09 SSBOND 27 CYS C 423 CYS C 449 1555 1555 2.10 SSBOND 28 CYS D 92 CYS D 419 1555 1555 2.03 SSBOND 29 CYS D 124 CYS D 129 1555 1555 2.06 SSBOND 30 CYS D 176 CYS D 194 1555 1555 2.10 SSBOND 31 CYS D 184 CYS D 231 1555 1555 2.04 SSBOND 32 CYS D 233 CYS D 238 1555 1555 2.08 SSBOND 33 CYS D 279 CYS D 292 1555 1555 2.14 SSBOND 34 CYS D 281 CYS D 290 1555 1555 2.06 SSBOND 35 CYS D 319 CYS D 337 1555 1555 2.01 SSBOND 36 CYS D 423 CYS D 449 1555 1555 2.09 LINK ND2 ASN A 86 C1 NAG A 501 1555 1555 1.43 LINK ND2 ASN A 146 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN A 201 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN B 86 C1 NAG B 501 1555 1555 1.43 LINK ND2 ASN B 146 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B 201 C1 NAG H 1 1555 1555 1.47 LINK ND2 ASN C 86 C1 NAG C 502 1555 1555 1.42 LINK ND2 ASN C 146 C1 NAG C 501 1555 1555 1.44 LINK ND2 ASN C 201 C1 NAG I 1 1555 1555 1.47 LINK ND2 ASN D 146 C1 NAG D 501 1555 1555 1.43 LINK ND2 ASN D 201 C1 NAG J 1 1555 1555 1.46 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.47 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.42 LINK O6 BMA F 3 C1 MAN F 4 1555 1555 1.43 LINK O3 BMA F 3 C1 MAN F 7 1555 1555 1.45 LINK O3 MAN F 4 C1 MAN F 5 1555 1555 1.47 LINK O6 MAN F 4 C1 MAN F 6 1555 1555 1.41 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.47 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.40 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.41 LINK O6 BMA H 3 C1 MAN H 4 1555 1555 1.46 LINK O3 MAN H 4 C1 MAN H 5 1555 1555 1.44 LINK O6 MAN H 4 C1 MAN H 6 1555 1555 1.43 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.42 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.47 LINK O6 BMA I 3 C1 MAN I 4 1555 1555 1.49 LINK O3 MAN I 4 C1 MAN I 5 1555 1555 1.46 LINK O6 MAN I 4 C1 MAN I 6 1555 1555 1.42 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.45 LINK O6 BMA J 3 C1 MAN J 4 1555 1555 1.48 LINK O3 MAN J 4 C1 MAN J 5 1555 1555 1.48 LINK O6 MAN J 4 C1 MAN J 6 1555 1555 1.43 LINK O ASP A 294 CA CA A 514 1555 1555 2.30 LINK O GLY A 298 CA CA A 514 1555 1555 2.40 LINK OD2 ASP A 325 CA CA A 514 1555 1555 2.38 LINK O PRO A 348 CA CA A 514 1555 1555 2.41 LINK CA CA A 514 O HOH A 650 1555 1555 2.40 LINK CA CA A 514 O HOH A 848 1555 1555 2.75 LINK O ASP B 294 CA CA B 514 1555 1555 2.25 LINK O GLY B 298 CA CA B 514 1555 1555 2.43 LINK OD2 ASP B 325 CA CA B 514 1555 1555 2.38 LINK O PRO B 348 CA CA B 514 1555 1555 2.48 LINK CA CA B 514 O HOH B 728 1555 1555 2.37 LINK CA CA B 514 O HOH B 823 1555 1555 2.68 LINK O ASP C 294 CA CA C 512 1555 1555 2.23 LINK O GLY C 298 CA CA C 512 1555 1555 2.41 LINK OD2 ASP C 325 CA CA C 512 1555 1555 2.33 LINK O PRO C 348 CA CA C 512 1555 1555 2.48 LINK CA CA C 512 O HOH C 711 1555 1555 2.46 LINK CA CA C 512 O HOH C 799 1555 1555 2.55 LINK O ASP D 294 CA CA D 511 1555 1555 2.28 LINK O GLY D 298 CA CA D 511 1555 1555 2.29 LINK OD2 ASP D 325 CA CA D 511 1555 1555 2.40 LINK O PRO D 348 CA CA D 511 1555 1555 2.41 LINK CA CA D 511 O HOH D 695 1555 1555 2.32 LINK CA CA D 511 O HOH D 740 1555 1555 2.71 CISPEP 1 THR A 326 SER A 327 0 3.80 CISPEP 2 SER A 345 PRO A 346 0 4.44 CISPEP 3 ARG A 432 PRO A 433 0 2.42 CISPEP 4 THR B 326 SER B 327 0 5.00 CISPEP 5 SER B 345 PRO B 346 0 6.07 CISPEP 6 ARG B 432 PRO B 433 0 3.08 CISPEP 7 THR C 326 SER C 327 0 5.84 CISPEP 8 SER C 345 PRO C 346 0 5.86 CISPEP 9 ARG C 432 PRO C 433 0 1.06 CISPEP 10 THR D 326 SER D 327 0 7.57 CISPEP 11 SER D 345 PRO D 346 0 4.16 CISPEP 12 ARG D 432 PRO D 433 0 2.48 CRYST1 105.995 75.763 105.976 90.00 90.50 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009434 0.000000 0.000083 0.00000 SCALE2 0.000000 0.013199 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009436 0.00000