HEADER MEMBRANE PROTEIN 06-SEP-18 6HKC TITLE SOLUTION STRUCTURE OF THE SUSHI 1 DOMAIN OF GABABR1A COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAMMA-AMINOBUTYRIC ACID TYPE B RECEPTOR SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GB1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GABBR1, GPRC3A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NEUROTRANSMITTER RECEPTOR, G PROTEIN COUPLED RECEPTORS, MEMBRANE KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.N.VOLKOV,L.BUTS,I.VAN MOLLE REVDAT 3 14-JUN-23 6HKC 1 REMARK REVDAT 2 08-MAY-19 6HKC 1 REMARK REVDAT 1 23-JAN-19 6HKC 0 JRNL AUTH H.C.RICE,D.DE MALMAZET,A.SCHREURS,S.FRERE,I.VAN MOLLE, JRNL AUTH 2 A.N.VOLKOV,E.CREEMERS,I.VERTKIN,J.NYS,F.M.RANAIVOSON, JRNL AUTH 3 D.COMOLETTI,J.N.SAVAS,H.REMAUT,D.BALSCHUN,K.D.WIERDA, JRNL AUTH 4 I.SLUTSKY,K.FARROW,B.DE STROOPER,J.DE WIT JRNL TITL SECRETED AMYLOID-BETA PRECURSOR PROTEIN FUNCTIONS AS A JRNL TITL 2 GABABR1A LIGAND TO MODULATE SYNAPTIC TRANSMISSION. JRNL REF SCIENCE V. 363 2019 JRNL REFN ESSN 1095-9203 JRNL PMID 30630900 JRNL DOI 10.1126/SCIENCE.AAO4827 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HKC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200011634. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 SUSHI 1, 3 MM APP 9MER, 50 MM REMARK 210 POTASSIUM PHOSPHATE, 50 MM REMARK 210 SODIUM CHLORIDE, 0.01 % SODIUM REMARK 210 AZIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 HN(COCA)CB; 3D HNCO; 3D HN(CA)CO; REMARK 210 3D HBHA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HCCH-TOCSY; 2D 1H-13C HSQC; 2D REMARK 210 1H-13C HSQC AROMATIC; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-13C NOESY AROMATIC; 2D REMARK 210 (HB)CB(CGCD)HD; 2D (HB)CB(CGCDCE) REMARK 210 HE REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, CCPNMR REMARK 210 ANALYSIS, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 13 -80.00 -76.51 REMARK 500 1 GLU A 15 100.54 -58.71 REMARK 500 1 ARG A 21 -86.58 -109.72 REMARK 500 1 ASP A 26 -27.03 68.50 REMARK 500 1 GLN A 27 -146.07 -90.33 REMARK 500 1 VAL A 28 19.75 54.26 REMARK 500 1 LYS A 29 -74.85 -101.41 REMARK 500 1 ASN A 32 -70.20 -74.39 REMARK 500 1 ASP A 37 75.81 61.97 REMARK 500 1 THR A 65 -75.40 -49.89 REMARK 500 1 ASP A 68 96.73 -172.65 REMARK 500 2 PRO A 2 93.08 -68.23 REMARK 500 2 PRO A 13 -85.01 -66.75 REMARK 500 2 GLU A 15 100.90 -50.67 REMARK 500 2 ASP A 26 12.77 56.17 REMARK 500 2 GLN A 27 -162.69 -124.47 REMARK 500 2 VAL A 28 13.83 56.92 REMARK 500 2 ASP A 37 -27.51 167.20 REMARK 500 2 GLU A 47 49.07 -155.11 REMARK 500 2 ASP A 68 89.16 -168.82 REMARK 500 3 ASP A 26 3.96 92.91 REMARK 500 3 VAL A 28 18.78 52.36 REMARK 500 3 ALA A 30 107.81 -168.03 REMARK 500 3 ASP A 68 89.18 -170.61 REMARK 500 4 GLU A 15 92.47 -65.54 REMARK 500 4 ARG A 21 -65.71 -103.40 REMARK 500 4 ARG A 25 -173.05 -64.77 REMARK 500 4 ASP A 26 -45.74 68.63 REMARK 500 4 GLN A 27 -155.92 -76.42 REMARK 500 4 VAL A 28 27.51 49.31 REMARK 500 4 ASP A 37 -4.00 80.16 REMARK 500 4 ASP A 68 89.29 -169.88 REMARK 500 5 PRO A 2 92.86 -68.29 REMARK 500 5 PRO A 13 -146.22 -78.23 REMARK 500 5 GLU A 15 101.31 -44.20 REMARK 500 5 ALA A 30 89.01 -151.07 REMARK 500 5 ASP A 66 74.88 -157.93 REMARK 500 5 ASP A 68 88.95 -167.96 REMARK 500 6 PRO A 13 -132.04 -76.88 REMARK 500 6 GLU A 15 101.05 -43.95 REMARK 500 6 ARG A 25 -172.08 -60.70 REMARK 500 6 ASP A 26 -35.86 69.40 REMARK 500 6 VAL A 28 11.88 59.45 REMARK 500 6 ALA A 30 91.16 -166.13 REMARK 500 6 SER A 63 149.09 -174.19 REMARK 500 6 ASP A 68 89.05 -170.26 REMARK 500 6 THR A 69 107.88 -160.29 REMARK 500 7 PRO A 2 33.55 -78.96 REMARK 500 7 PRO A 13 -150.22 -88.07 REMARK 500 7 TRP A 14 -177.59 -63.48 REMARK 500 REMARK 500 THIS ENTRY HAS 182 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 27581 RELATED DB: BMRB DBREF 6HKC A 3 75 UNP Q9UBS5 GABR1_HUMAN 26 98 SEQADV 6HKC GLY A 1 UNP Q9UBS5 EXPRESSION TAG SEQADV 6HKC PRO A 2 UNP Q9UBS5 EXPRESSION TAG SEQRES 1 A 75 GLY PRO THR SER GLU GLY CYS GLN ILE ILE HIS PRO PRO SEQRES 2 A 75 TRP GLU GLY GLY ILE ARG TYR ARG GLY LEU THR ARG ASP SEQRES 3 A 75 GLN VAL LYS ALA ILE ASN PHE LEU PRO VAL ASP TYR GLU SEQRES 4 A 75 ILE GLU TYR VAL CYS ARG GLY GLU ARG GLU VAL VAL GLY SEQRES 5 A 75 PRO LYS VAL ARG LYS CYS LEU ALA ASN GLY SER TRP THR SEQRES 6 A 75 ASP MET ASP THR PRO SER ARG CYS VAL ARG SHEET 1 AA1 3 GLY A 16 ARG A 19 0 SHEET 2 AA1 3 GLU A 39 CYS A 44 -1 O GLU A 41 N ARG A 19 SHEET 3 AA1 3 ARG A 56 LYS A 57 -1 O ARG A 56 N ILE A 40 SHEET 1 AA2 2 VAL A 50 VAL A 51 0 SHEET 2 AA2 2 ARG A 72 CYS A 73 -1 O ARG A 72 N VAL A 51 SSBOND 1 CYS A 7 CYS A 58 1555 1555 2.03 SSBOND 2 CYS A 44 CYS A 73 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1